Miyakogusa Predicted Gene

Lj0g3v0054399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054399.1 Non Characterized Hit- tr|F6I3H9|F6I3H9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.22,0,SUBFAMILY NOT NAMED,NULL; VACUOLAR PROTEIN SORTING
54,NULL; Vps54,Vps54-like; DUF2450,Vacuolar prote,CUFF.2466.1
         (991 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g047908.1 | vacuolar sorting protein | HC | chr2:21009669-...  1413   0.0  

>Medtr2g047908.1 | vacuolar sorting protein | HC |
            chr2:21009669-20992664 | 20130731
          Length = 1001

 Score = 1413 bits (3658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 739/1020 (72%), Positives = 785/1020 (76%), Gaps = 48/1020 (4%)

Query: 1    MDSPPSQQP-WGRXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXXXXI 42
            MDSPPSQQP WGR                                              I
Sbjct: 1    MDSPPSQQPSWGRSPTFSTTHLNRTTSTSSSTSSPSFSKDSSTIQSLSSILNNPLSSTTI 60

Query: 43   SPPEFALISTTKSTSDISRSDFLPYLSAVADPLHRFHHIRNHATNEI--IADLQPAAGEA 100
            S PEF  IS+TKSTS ++RSDFLPYLS+++DP HRF  IR HA NEI  I+D    AGEA
Sbjct: 61   SSPEFTPISSTKSTSTLTRSDFLPYLSSLSDPFHRFDEIRKHANNEISTISD-DGGAGEA 119

Query: 101  LVACLREVPSLYFKEDFRLEDGSTFRAACPFSAISENAALQEKLSQYLDVVELHLVKEIS 160
            LVACLREVPSLYFK+DF LE+G+TFRAACPFS  +ENA LQEKLSQYLDVVELHLVKEIS
Sbjct: 120  LVACLREVPSLYFKQDFHLEEGATFRAACPFSTFAENAILQEKLSQYLDVVELHLVKEIS 179

Query: 161  LRSSSFFEAQGQLQDLNAKIVEGCARIRELKDTVRLIDSDLVESARQIQXXXXXXXXXXX 220
            LRSSSFFEAQG+LQDLN KIVEGC RIRELKDTVRLIDSDLVESARQIQ           
Sbjct: 180  LRSSSFFEAQGELQDLNGKIVEGCTRIRELKDTVRLIDSDLVESARQIQLLNGTRTNLLA 239

Query: 221  XXXXXXXXXYVNQXXXXXXXXXXXXDCAGAXXXXXXXXXXXXXXXXXXXHCFRHLRDHVI 280
                     YVNQ            DCAGA                   HCFRHLRDHV 
Sbjct: 240  LQQKLRLILYVNQALSALKLLVASADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDHVT 299

Query: 281  GFIESINSILSAEFIRASLHDATETDVIILSKAKARASLPMNGKDDEVKLEEEETTNFKD 340
            GFIESINSILSAEFIRASLHDA E+DVIILSKAK+RASL MNGKDDE KLEEE TTNFKD
Sbjct: 300  GFIESINSILSAEFIRASLHDAAESDVIILSKAKSRASLLMNGKDDEAKLEEE-TTNFKD 358

Query: 341  RLLPTAIGLLRTAKLPSVLRFYRDTLTADMKSAIKTAVAELLPVLAARGSESEFFXXXXX 400
             LLPT IGLLRTAKLPSVLR YRDTLTADMKSAIKTAVAELLPV+AAR SESEFF     
Sbjct: 359  SLLPTVIGLLRTAKLPSVLRIYRDTLTADMKSAIKTAVAELLPVIAARASESEFFSGDRA 418

Query: 401  XXXXXXXXXXXXXXXXXXXDCFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNRDGHYXX 460
                               DCFVHLLSAIF IVQAHLVRAAEVKKAIEWILSN DGHY  
Sbjct: 419  VEADGGGASLASKLKSLSSDCFVHLLSAIFTIVQAHLVRAAEVKKAIEWILSNCDGHYAS 478

Query: 461  XXXXXXXXXXXXXXEISQESEIHGTTLLPYSPQRSVAKGP-FQGKTIDAVSSSNMSKNFR 519
                          EISQESE+HGTT LPYSPQ++VAKGP FQGK IDAVSSSNMSKNFR
Sbjct: 479  DSVAAAIAHGAAAAEISQESEVHGTTFLPYSPQKNVAKGPSFQGKAIDAVSSSNMSKNFR 538

Query: 520  ADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITQEFITATEKIGG 579
            ADVLRENAEAVFAACDAAHGRWAKLLGVR  LHPRLKLQEFLT+YNIT EFITATEKIGG
Sbjct: 539  ADVLRENAEAVFAACDAAHGRWAKLLGVRTTLHPRLKLQEFLTVYNITHEFITATEKIGG 598

Query: 580  RLGYSIRGTLQSQAKAFVDFQHESRMAKIKALLDQETWVEIDVPEEFQSIINILFSSDVL 639
            RLGYSIRG L SQAKAF+D QH+SR +KI A+LDQETWVEIDVP+EFQSIIN LF  D L
Sbjct: 599  RLGYSIRGILHSQAKAFIDCQHDSRASKIMAVLDQETWVEIDVPDEFQSIINTLFPLDAL 658

Query: 640  TSGNLNGTEEDNAHSYSD---NN-----ADAVHSNAEHQVEQTNSIETSRKSAGSDGSKP 691
            +SG+ NG EEDN++SY D   NN     AD   SNAE  VEQT+S + S+K         
Sbjct: 659  SSGDPNGVEEDNSNSYHDLATNNDARPMADTGQSNAEQNVEQTDSTDESKK--------- 709

Query: 692  LVDSVEPNRGNNRISSAQNNNVEKDHKKSVSQALLYKGVGYHMVNCGLILLKMLSEYIDM 751
                  PNRG+++  S ++ + EKD KKS SQ L YKGVGYHMVNCGLILLKMLSEYIDM
Sbjct: 710  ------PNRGHSK--SLESISTEKDQKKSASQPLFYKGVGYHMVNCGLILLKMLSEYIDM 761

Query: 752  NNVLPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIH 811
            NN+LP LSSEVVHRV EILK+FNTRTCQLVLGA AMQVSGLKSITSKHLALASQVISFIH
Sbjct: 762  NNLLPALSSEVVHRVVEILKYFNTRTCQLVLGAKAMQVSGLKSITSKHLALASQVISFIH 821

Query: 812  AIIPEIRQILFLKVPETRKSLLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLP 871
            AIIPEIRQILFLKVPE RK LLLSEIDRVAQDYKVHRDEIH+KLVQIMRERLLVHLRGLP
Sbjct: 822  AIIPEIRQILFLKVPENRKLLLLSEIDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLP 881

Query: 872  QIVESWNRPEEADPQPSQFARSLTKEVGYLQRVLSRTLNDEDVHAIFRQVVIIFHSQISE 931
            QIVESWNRPE+ADPQPSQFARSLTKEVG+LQRVLSRTLN++DV AIFRQVV+IFHSQISE
Sbjct: 882  QIVESWNRPEDADPQPSQFARSLTKEVGFLQRVLSRTLNEDDVQAIFRQVVVIFHSQISE 941

Query: 932  AFSRFDISTSQAQNRLSRDIKHILQCIRSLPSGDLGKSDTPNWGQLDEFLVQRFGSDAVQ 991
            AFSRFDISTSQAQNRL RDIKHILQCIRSLPSGDL KSDTPNWGQLDEFLVQRFG+DAVQ
Sbjct: 942  AFSRFDISTSQAQNRLYRDIKHILQCIRSLPSGDLSKSDTPNWGQLDEFLVQRFGNDAVQ 1001