Miyakogusa Predicted Gene

Lj0g3v0050309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0050309.1 tr|C6A1E9|C6A1E9_THESM D-tyrosyl-tRNA(Tyr)
deacylase OS=Thermococcus sibiricus (strain MM 739 / DSM
,28.81,2e-18,AF0625-like,NULL; tRNA_deacylase,D-aminoacyl-tRNA
deacylase; seg,NULL,NODE_51073_length_1284_cov_30.117601.path2.1
         (316 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g066120.1 | D-aminoacyl-tRNA deacylase | HC | chr8:2747029...   562   e-160
Medtr8g066120.2 | D-aminoacyl-tRNA deacylase | HC | chr8:2747031...   404   e-113
Medtr8g066120.3 | D-aminoacyl-tRNA deacylase | HC | chr8:2747031...   342   4e-94

>Medtr8g066120.1 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470291-27463868 | 20130731
          Length = 313

 Score =  562 bits (1449), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 275/316 (87%), Positives = 289/316 (91%), Gaps = 3/316 (0%)

Query: 1   MVALLVATRSDSASINPANALLAMPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDL 60
           MV+LLVAT SD ASINPANALLAMPGWQPGP FQDDMKSFVNE LRVLLHGKSIVVED L
Sbjct: 1   MVSLLVATTSDPASINPANALLAMPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYL 60

Query: 61  DKRWEEVTGEVVDEVIFFSKHTAVSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120
           D RWEEVTGEVVDEVIF SKHTA SNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP
Sbjct: 61  DTRWEEVTGEVVDEVIFLSKHTAASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120

Query: 121 RMGPWLRLLKKIAEARNLVPEFEITLEATHHGPVTNKPTMFLEIGSTDDYWKRLDAAEVM 180
           R+GPW+RLLK IA+A NLVPEFEITLEATHHGP+TNKPTMFLEIGST+DYWKR DAA+VM
Sbjct: 121 RIGPWIRLLKNIAQAHNLVPEFEITLEATHHGPMTNKPTMFLEIGSTEDYWKRQDAAQVM 180

Query: 181 AQLVWEXXXXXXXTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVLKDDVWVGHLLSGYS 240
           AQLVWE       TD+GNW RENDKKKVLLGIGGGHY PRHM+VVLKD VWVGH+LSGYS
Sbjct: 181 AQLVWEGLGLGGGTDVGNWSRENDKKKVLLGIGGGHYVPRHMNVVLKDGVWVGHVLSGYS 240

Query: 241 LPMEDPNNAKGERNTEIGGTWKESIKAAYEASKSAFPGGEILAHLDHKSFKGWQKNAITG 300
           +PMEDP   KGE N EIGGTWK+SIKAAYEA+KSAFPGGEI+AHLD KSFKGWQKNAITG
Sbjct: 241 VPMEDP---KGETNVEIGGTWKQSIKAAYEATKSAFPGGEIIAHLDQKSFKGWQKNAITG 297

Query: 301 FLTEQNIKIGKPNNFY 316
           FLTEQNIKIGKPNNFY
Sbjct: 298 FLTEQNIKIGKPNNFY 313


>Medtr8g066120.2 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470317-27463868 | 20130731
          Length = 271

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/226 (87%), Positives = 206/226 (91%)

Query: 1   MVALLVATRSDSASINPANALLAMPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDL 60
           MV+LLVAT SD ASINPANALLAMPGWQPGP FQDDMKSFVNE LRVLLHGKSIVVED L
Sbjct: 46  MVSLLVATTSDPASINPANALLAMPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYL 105

Query: 61  DKRWEEVTGEVVDEVIFFSKHTAVSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120
           D RWEEVTGEVVDEVIF SKHTA SNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP
Sbjct: 106 DTRWEEVTGEVVDEVIFLSKHTAASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 165

Query: 121 RMGPWLRLLKKIAEARNLVPEFEITLEATHHGPVTNKPTMFLEIGSTDDYWKRLDAAEVM 180
           R+GPW+RLLK IA+A NLVPEFEITLEATHHGP+TNKPTMFLEIGST+DYWKR DAA+VM
Sbjct: 166 RIGPWIRLLKNIAQAHNLVPEFEITLEATHHGPMTNKPTMFLEIGSTEDYWKRQDAAQVM 225

Query: 181 AQLVWEXXXXXXXTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVL 226
           AQLVWE       TD+GNW RENDKKKVLLGIGGGHY PRHM+VVL
Sbjct: 226 AQLVWEGLGLGGGTDVGNWSRENDKKKVLLGIGGGHYVPRHMNVVL 271


>Medtr8g066120.3 | D-aminoacyl-tRNA deacylase | HC |
           chr8:27470317-27463877 | 20130731
          Length = 242

 Score =  342 bits (876), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 165/185 (89%), Positives = 173/185 (93%)

Query: 1   MVALLVATRSDSASINPANALLAMPGWQPGPDFQDDMKSFVNEELRVLLHGKSIVVEDDL 60
           MV+LLVAT SD ASINPANALLAMPGWQPGP FQDDMKSFVNE LRVLLHGKSIVVED L
Sbjct: 46  MVSLLVATTSDPASINPANALLAMPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYL 105

Query: 61  DKRWEEVTGEVVDEVIFFSKHTAVSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120
           D RWEEVTGEVVDEVIF SKHTA SNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP
Sbjct: 106 DTRWEEVTGEVVDEVIFLSKHTAASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 165

Query: 121 RMGPWLRLLKKIAEARNLVPEFEITLEATHHGPVTNKPTMFLEIGSTDDYWKRLDAAEVM 180
           R+GPW+RLLK IA+A NLVPEFEITLEATHHGP+TNKPTMFLEIGST+DYWKR DAA+VM
Sbjct: 166 RIGPWIRLLKNIAQAHNLVPEFEITLEATHHGPMTNKPTMFLEIGSTEDYWKRQDAAQVM 225

Query: 181 AQLVW 185
           AQ+ W
Sbjct: 226 AQVEW 230