Miyakogusa Predicted Gene

Lj0g3v0048649.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0048649.2 Non Characterized Hit- tr|K3X1S9|K3X1S9_PYTUL
Uncharacterized protein OS=Pythium ultimum
GN=PYU1_G01,26.23,3e-18,zf-SNAP50_C,snRNA-activating protein complex,
subunit 3; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,,CUFF.2262.2
         (442 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g043000.2 | snRNA activating complex family protein | HC |...   629   e-180
Medtr1g043000.1 | snRNA activating complex family protein | HC |...   629   e-180
Medtr1g043000.3 | snRNA activating complex family protein | HC |...   629   e-180
Medtr4g134340.1 | snRNA activating complex family protein | HC |...   608   e-174
Medtr4g134340.3 | snRNA activating complex family protein | HC |...   602   e-172
Medtr8g042940.1 | snRNA activating complex family protein | HC |...   565   e-161
Medtr4g064230.1 | snRNA activating complex family protein | HC |...   448   e-126
Medtr4g134340.2 | snRNA activating complex family protein | HC |...   434   e-121

>Medtr1g043000.2 | snRNA activating complex family protein | HC |
           chr1:16102056-16108532 | 20130731
          Length = 447

 Score =  629 bits (1622), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/438 (69%), Positives = 358/438 (81%), Gaps = 14/438 (3%)

Query: 15  DLSVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLSHHDISVDDLK 74
           D S+ IPRGGPIYVSNM GP   VP F+ S L++L +L++EL  DS+    HDISVDDLK
Sbjct: 14  DPSISIPRGGPIYVSNMSGPIVRVPLFQDSILTQLHSLQSELPPDSN----HDISVDDLK 69

Query: 75  VFSENELMDMALKEVFEGRENNENHPPLLNQPNTGC--HVKNSRKKKRGTNNSILDSDCM 132
           VF+E++LMDMALK+VF+GR+NN++ P        GC    K  R+K R TN  ILDS+C 
Sbjct: 70  VFTEDDLMDMALKQVFQGRDNNQDPPNAELNIEFGCRGQKKQFRRKSRLTNKPILDSNCK 129

Query: 133 DKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRSISSSRKVNSGG 192
           +KVE++V IKQKQEED A  RLHSF+P CR N+SA KS+ T+RMM+LRS SS+RKVN+ G
Sbjct: 130 EKVEEVVRIKQKQEEDKAQVRLHSFHPDCRINQSANKSIKTQRMMSLRSTSSARKVNTLG 189

Query: 193 LQEHTPVQYPEVVLSVEIYHNVRKGLK-------TQELLVLGRQTLTASRDKIFCSMDQV 245
           LQEH PVQ  EVVLSVEI+HN RKG+K       TQELLVLG Q L+  RDKI CS DQV
Sbjct: 190 LQEHIPVQDSEVVLSVEIFHNFRKGVKLSNAKKKTQELLVLGGQNLSVLRDKINCSTDQV 249

Query: 246 MQKAGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKKWEYIITGELKQ 305
           MQKAGQHDPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQKKWEYII GEL+Q
Sbjct: 250 MQKAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYIINGELQQ 309

Query: 306 KQKAIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTLVVRDMRLMHP 365
           KQKAI+G  S   +P F+S EMHKI FCDL FRLGAGYLYCHQG+C+HTLV+RDMRL+H 
Sbjct: 310 KQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHTLVIRDMRLIHA 369

Query: 366 DDVNNRAVYPRVTFQLKMRFQKCRVCKIFRATKVTVDDRWTSENPCYFCDDCFALLHLAE 425
           DDV N AVYP VTFQLK+RFQKC VCKIFRATKVTVDD+WT +NPCYFCD+CF+LLHLAE
Sbjct: 370 DDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFCDECFSLLHLAE 429

Query: 426 D-GSPLYTEYLEYNYHHD 442
           D GSP+YT+++EY+Y+HD
Sbjct: 430 DGGSPMYTDFIEYDYNHD 447


>Medtr1g043000.1 | snRNA activating complex family protein | HC |
           chr1:16099241-16108514 | 20130731
          Length = 447

 Score =  629 bits (1622), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/438 (69%), Positives = 358/438 (81%), Gaps = 14/438 (3%)

Query: 15  DLSVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLSHHDISVDDLK 74
           D S+ IPRGGPIYVSNM GP   VP F+ S L++L +L++EL  DS+    HDISVDDLK
Sbjct: 14  DPSISIPRGGPIYVSNMSGPIVRVPLFQDSILTQLHSLQSELPPDSN----HDISVDDLK 69

Query: 75  VFSENELMDMALKEVFEGRENNENHPPLLNQPNTGC--HVKNSRKKKRGTNNSILDSDCM 132
           VF+E++LMDMALK+VF+GR+NN++ P        GC    K  R+K R TN  ILDS+C 
Sbjct: 70  VFTEDDLMDMALKQVFQGRDNNQDPPNAELNIEFGCRGQKKQFRRKSRLTNKPILDSNCK 129

Query: 133 DKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRSISSSRKVNSGG 192
           +KVE++V IKQKQEED A  RLHSF+P CR N+SA KS+ T+RMM+LRS SS+RKVN+ G
Sbjct: 130 EKVEEVVRIKQKQEEDKAQVRLHSFHPDCRINQSANKSIKTQRMMSLRSTSSARKVNTLG 189

Query: 193 LQEHTPVQYPEVVLSVEIYHNVRKGLK-------TQELLVLGRQTLTASRDKIFCSMDQV 245
           LQEH PVQ  EVVLSVEI+HN RKG+K       TQELLVLG Q L+  RDKI CS DQV
Sbjct: 190 LQEHIPVQDSEVVLSVEIFHNFRKGVKLSNAKKKTQELLVLGGQNLSVLRDKINCSTDQV 249

Query: 246 MQKAGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKKWEYIITGELKQ 305
           MQKAGQHDPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQKKWEYII GEL+Q
Sbjct: 250 MQKAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYIINGELQQ 309

Query: 306 KQKAIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTLVVRDMRLMHP 365
           KQKAI+G  S   +P F+S EMHKI FCDL FRLGAGYLYCHQG+C+HTLV+RDMRL+H 
Sbjct: 310 KQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHTLVIRDMRLIHA 369

Query: 366 DDVNNRAVYPRVTFQLKMRFQKCRVCKIFRATKVTVDDRWTSENPCYFCDDCFALLHLAE 425
           DDV N AVYP VTFQLK+RFQKC VCKIFRATKVTVDD+WT +NPCYFCD+CF+LLHLAE
Sbjct: 370 DDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFCDECFSLLHLAE 429

Query: 426 D-GSPLYTEYLEYNYHHD 442
           D GSP+YT+++EY+Y+HD
Sbjct: 430 DGGSPMYTDFIEYDYNHD 447


>Medtr1g043000.3 | snRNA activating complex family protein | HC |
           chr1:16104862-16108532 | 20130731
          Length = 447

 Score =  629 bits (1622), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/438 (69%), Positives = 358/438 (81%), Gaps = 14/438 (3%)

Query: 15  DLSVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLSHHDISVDDLK 74
           D S+ IPRGGPIYVSNM GP   VP F+ S L++L +L++EL  DS+    HDISVDDLK
Sbjct: 14  DPSISIPRGGPIYVSNMSGPIVRVPLFQDSILTQLHSLQSELPPDSN----HDISVDDLK 69

Query: 75  VFSENELMDMALKEVFEGRENNENHPPLLNQPNTGC--HVKNSRKKKRGTNNSILDSDCM 132
           VF+E++LMDMALK+VF+GR+NN++ P        GC    K  R+K R TN  ILDS+C 
Sbjct: 70  VFTEDDLMDMALKQVFQGRDNNQDPPNAELNIEFGCRGQKKQFRRKSRLTNKPILDSNCK 129

Query: 133 DKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRSISSSRKVNSGG 192
           +KVE++V IKQKQEED A  RLHSF+P CR N+SA KS+ T+RMM+LRS SS+RKVN+ G
Sbjct: 130 EKVEEVVRIKQKQEEDKAQVRLHSFHPDCRINQSANKSIKTQRMMSLRSTSSARKVNTLG 189

Query: 193 LQEHTPVQYPEVVLSVEIYHNVRKGLK-------TQELLVLGRQTLTASRDKIFCSMDQV 245
           LQEH PVQ  EVVLSVEI+HN RKG+K       TQELLVLG Q L+  RDKI CS DQV
Sbjct: 190 LQEHIPVQDSEVVLSVEIFHNFRKGVKLSNAKKKTQELLVLGGQNLSVLRDKINCSTDQV 249

Query: 246 MQKAGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKKWEYIITGELKQ 305
           MQKAGQHDPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQKKWEYII GEL+Q
Sbjct: 250 MQKAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYIINGELQQ 309

Query: 306 KQKAIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTLVVRDMRLMHP 365
           KQKAI+G  S   +P F+S EMHKI FCDL FRLGAGYLYCHQG+C+HTLV+RDMRL+H 
Sbjct: 310 KQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHTLVIRDMRLIHA 369

Query: 366 DDVNNRAVYPRVTFQLKMRFQKCRVCKIFRATKVTVDDRWTSENPCYFCDDCFALLHLAE 425
           DDV N AVYP VTFQLK+RFQKC VCKIFRATKVTVDD+WT +NPCYFCD+CF+LLHLAE
Sbjct: 370 DDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFCDECFSLLHLAE 429

Query: 426 D-GSPLYTEYLEYNYHHD 442
           D GSP+YT+++EY+Y+HD
Sbjct: 430 DGGSPMYTDFIEYDYNHD 447


>Medtr4g134340.1 | snRNA activating complex family protein | HC |
           chr4:56241521-56238473 | 20130731
          Length = 431

 Score =  608 bits (1567), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 298/441 (67%), Positives = 350/441 (79%), Gaps = 21/441 (4%)

Query: 10  DTAECDL-----SVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLS 64
           D  EC +     S+ IPRGGPIYVSNM GP   VP F+ S LS+L +L++EL     Q  
Sbjct: 4   DELECSIGIDNPSISIPRGGPIYVSNMSGPIVRVPLFQDSLLSQLHSLQSEL---PPQHH 60

Query: 65  HHDISV-DDLKVFSENELMDMALKEVFEGRENNENHPPLLNQPNTGCHVKNS--RKKKRG 121
            +DI+V DDLKVF+E+ELMDM+LK+VF+ + N E+H           H K    R+K R 
Sbjct: 61  DYDITVVDDLKVFTEDELMDMSLKQVFQNQPNAEDHH----------HQKKKLFRRKSRL 110

Query: 122 TNNSILDSDCMDKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRS 181
           TN SILDS+C +KV+++V IK KQEED A   LHSF+P CR N+SA KS+ T+RMM+LRS
Sbjct: 111 TNKSILDSNCKEKVDKVVRIKHKQEEDKAQVTLHSFHPHCRINQSANKSIKTQRMMSLRS 170

Query: 182 ISSSRKVNSGGLQEHTPVQYPEVVLSVEIYHNVRKGLKTQELLVLGRQTLTASRDKIFCS 241
            SS+ K+N+ GLQEH PVQ  EVVLSVEIYHN R G+KTQELLVLG Q L+  RDKI CS
Sbjct: 171 TSSATKLNTVGLQEHIPVQDSEVVLSVEIYHNFRNGVKTQELLVLGGQNLSVLRDKINCS 230

Query: 242 MDQVMQKAGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKKWEYIITG 301
            DQVMQKA QHDPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQKKWEYII G
Sbjct: 231 TDQVMQKAAQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYIING 290

Query: 302 ELKQKQKAIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTLVVRDMR 361
           EL+QKQKAI+G  S   +P F+S EMHKI FCDL FRLGAGYLYCHQG+C+HTLV+RDMR
Sbjct: 291 ELQQKQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHTLVIRDMR 350

Query: 362 LMHPDDVNNRAVYPRVTFQLKMRFQKCRVCKIFRATKVTVDDRWTSENPCYFCDDCFALL 421
           L+H DDV N AVYP VTFQLK+RFQKC VCKIFRATKVTVDD+WT +NPCYFCD+CF+LL
Sbjct: 351 LIHADDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFCDECFSLL 410

Query: 422 HLAEDGSPLYTEYLEYNYHHD 442
           HLAEDGSP YT+++EY+Y+HD
Sbjct: 411 HLAEDGSPTYTDFIEYDYNHD 431


>Medtr4g134340.3 | snRNA activating complex family protein | HC |
           chr4:56241798-56237940 | 20130731
          Length = 438

 Score =  602 bits (1551), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/448 (66%), Positives = 350/448 (78%), Gaps = 28/448 (6%)

Query: 10  DTAECDL-----SVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLS 64
           D  EC +     S+ IPRGGPIYVSNM GP   VP F+ S LS+L +L++EL     Q  
Sbjct: 4   DELECSIGIDNPSISIPRGGPIYVSNMSGPIVRVPLFQDSLLSQLHSLQSEL---PPQHH 60

Query: 65  HHDISV-DDLKVFSENELMDMALKEVFEGRENNENHPPLLNQPNTGCHVKNS--RKKKRG 121
            +DI+V DDLKVF+E+ELMDM+LK+VF+ + N E+H           H K    R+K R 
Sbjct: 61  DYDITVVDDLKVFTEDELMDMSLKQVFQNQPNAEDHH----------HQKKKLFRRKSRL 110

Query: 122 TNNSILDSDCMDKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRS 181
           TN SILDS+C +KV+++V IK KQEED A   LHSF+P CR N+SA KS+ T+RMM+LRS
Sbjct: 111 TNKSILDSNCKEKVDKVVRIKHKQEEDKAQVTLHSFHPHCRINQSANKSIKTQRMMSLRS 170

Query: 182 ISSSRKVNSGGLQEHTPVQYPEVVLSVEIYHNVRKGLK-------TQELLVLGRQTLTAS 234
            SS+ K+N+ GLQEH PVQ  EVVLSVEIYHN R G+K       TQELLVLG Q L+  
Sbjct: 171 TSSATKLNTVGLQEHIPVQDSEVVLSVEIYHNFRNGVKVFSAKKKTQELLVLGGQNLSVL 230

Query: 235 RDKIFCSMDQVMQKAGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKK 294
           RDKI CS DQVMQKA QHDPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQKK
Sbjct: 231 RDKINCSTDQVMQKAAQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKK 290

Query: 295 WEYIITGELKQKQKAIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHT 354
           WEYII GEL+QKQKAI+G  S   +P F+S EMHKI FCDL FRLGAGYLYCHQG+C+HT
Sbjct: 291 WEYIINGELQQKQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHT 350

Query: 355 LVVRDMRLMHPDDVNNRAVYPRVTFQLKMRFQKCRVCKIFRATKVTVDDRWTSENPCYFC 414
           LV+RDMRL+H DDV N AVYP VTFQLK+RFQKC VCKIFRATKVTVDD+WT +NPCYFC
Sbjct: 351 LVIRDMRLIHADDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFC 410

Query: 415 DDCFALLHLAEDGSPLYTEYLEYNYHHD 442
           D+CF+LLHLAEDGSP YT+++EY+Y+HD
Sbjct: 411 DECFSLLHLAEDGSPTYTDFIEYDYNHD 438


>Medtr8g042940.1 | snRNA activating complex family protein | HC |
           chr8:16621821-16627393 | 20130731
          Length = 423

 Score =  565 bits (1455), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/434 (64%), Positives = 339/434 (78%), Gaps = 25/434 (5%)

Query: 15  DLSVLIPRGGPIYVSNMVGPS-TTVPRFEGSFLSELQNLEAELCEDSSQLSHHDISVDD- 72
           D S+ I RGGPIY++NMV  S T+V  F+   L +++ L+AEL + SS  S      DD 
Sbjct: 9   DPSIPIARGGPIYIANMVNSSITSVHLFQHRLLYQVKILQAELSQHSSSSSTSHHDDDDI 68

Query: 73  ----LKVFSENELMDMALKEVFEGRENNENHPPLLNQPNTGCHVKNSRKKKRGTNNSILD 128
               LK+F+++ELMDMA K+ F+GRENNEN PP     N  C  KN RK +RG NN ILD
Sbjct: 69  SVDDLKLFTQDELMDMAFKQAFQGRENNENRPP-----NARCPEKNHRKTRRGPNNPILD 123

Query: 129 SDCMDKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRSISSSRKV 188
           S+C +KVE++V IKQKQEED A  + HSF      NES+ + + TERMM+LRS SSS KV
Sbjct: 124 SNCTEKVEKVVRIKQKQEEDKAKVKHHSFG----INESSNRPVRTERMMSLRSTSSSMKV 179

Query: 189 NSGGLQEHTPVQYPEVVLSVEIYHNVRKGLKTQELLVLGRQTLTASRDKIFCSMDQVMQK 248
           N+GGLQEH P+  PEVVLSVEIYHNV+KG+KT          LT  RDKI CS DQVMQK
Sbjct: 180 NTGGLQEHIPLHDPEVVLSVEIYHNVQKGVKT----------LTGLRDKICCSTDQVMQK 229

Query: 249 AGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKKWEYIITGELKQKQK 308
           AGQHDPSG+FLIEDVFYTDLRD SAIDLTRPI DW++NSKEEAQKKWEYII GEL++KQK
Sbjct: 230 AGQHDPSGYFLIEDVFYTDLRDTSAIDLTRPIFDWLRNSKEEAQKKWEYIINGELQKKQK 289

Query: 309 AIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTLVVRDMRLMHPDDV 368
           A++G  S   +P F+S+EMHKIRFCD+SF+LGA YLYCHQG+C+HT V+RDMR +H DDV
Sbjct: 290 AVLGEASVSHLPRFTSVEMHKIRFCDISFQLGAAYLYCHQGDCTHTFVIRDMRSVHADDV 349

Query: 369 NNRAVYPRVTFQLKMRFQKCRVCKIFRATKVTVDDRWTSENPCYFCDDCFALLHLAEDGS 428
           +NRAVYP VTFQLKMRF+KC VC IFRATKVTVD++WT +NPCYFCD+CF+LLHLAEDGS
Sbjct: 350 HNRAVYPIVTFQLKMRFKKCYVCNIFRATKVTVDNKWTPKNPCYFCDECFSLLHLAEDGS 409

Query: 429 PLYTEYLEYNYHHD 442
           PLYT+++EY+Y+HD
Sbjct: 410 PLYTDFIEYDYNHD 423


>Medtr4g064230.1 | snRNA activating complex family protein | HC |
           chr4:23947954-23943012 | 20130731
          Length = 406

 Score =  448 bits (1153), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/343 (65%), Positives = 265/343 (77%), Gaps = 9/343 (2%)

Query: 15  DLSVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLSHHDISVDDLK 74
           D S+ IPRGGPI+VSNM GP   VP F+ S L++L +L++EL  DS    +HDISVDDLK
Sbjct: 14  DPSISIPRGGPIFVSNMSGPIVRVPLFQDSILTQLHSLQSELPPDS----NHDISVDDLK 69

Query: 75  VFSENELMDMALKEVFEGRENNENHPPLLNQPNTGC--HVKNSRKKKRGTNNSILDSDCM 132
           VF+E++LMDMALK+VF+GR+NN++ P        GC    K  R+K R TN  ILDS+C 
Sbjct: 70  VFTEDDLMDMALKQVFQGRDNNQDPPNAELNIGFGCRGQKKQLRRKSRLTNKPILDSNCK 129

Query: 133 DKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMALRSISSSRKVNSGG 192
           +KVE++V IKQKQEED A  RLHSF+P CR N+SA KS+ T+RMM+LRS SS+RKVN+ G
Sbjct: 130 EKVEEVVRIKQKQEEDKAQVRLHSFHPDCRINKSANKSIKTQRMMSLRSTSSARKVNTLG 189

Query: 193 LQEHTPVQYPEVVLSVEIYHNVRKGLKTQELLVLGRQTLTASRDKIFCSMDQVMQKAGQH 252
           LQEH PVQ  EVVLSVEIYHN RKG+K   L    ++ L+  RDKI CS DQVMQKAGQH
Sbjct: 190 LQEHIPVQDSEVVLSVEIYHNFRKGVK---LSNAKKKNLSVLRDKINCSTDQVMQKAGQH 246

Query: 253 DPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQKKWEYIITGELKQKQKAIMG 312
           DPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQKKWEY I GEL+QKQKAI+G
Sbjct: 247 DPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYTINGELQQKQKAIVG 306

Query: 313 TVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTL 355
             S   +P F+S EMHKI FCDL FRLGAGYLYCHQ   +  L
Sbjct: 307 EASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQARTTFPL 349


>Medtr4g134340.2 | snRNA activating complex family protein | HC |
           chr4:56241798-56237993 | 20130731
          Length = 381

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/356 (63%), Positives = 261/356 (73%), Gaps = 32/356 (8%)

Query: 10  DTAECDL-----SVLIPRGGPIYVSNMVGPSTTVPRFEGSFLSELQNLEAELCEDSSQLS 64
           D  EC +     S+ IPRGGPIYVSNM GP   VP F+ S LS+L +L++EL        
Sbjct: 4   DELECSIGIDNPSISIPRGGPIYVSNMSGPIVRVPLFQDSLLSQLHSLQSELPP-----Q 58

Query: 65  HHDIS---VDDLKVFSENELMDMALKEVFEGRENNENHPPLLNQPNTGCHVKNS--RKKK 119
           HHD     VDDLKVF+E+ELMDM+LK+VF+ + N E+H           H K    R+K 
Sbjct: 59  HHDYDITVVDDLKVFTEDELMDMSLKQVFQNQPNAEDHH----------HQKKKLFRRKS 108

Query: 120 RGTNNSILDSDCMDKVEQIVTIKQKQEEDMAAARLHSFNPVCRTNESACKSLGTERMMAL 179
           R TN SILDS+C +KV+++V IK KQEED A   LHSF+P CR N+SA KS+ T+RMM+L
Sbjct: 109 RLTNKSILDSNCKEKVDKVVRIKHKQEEDKAQVTLHSFHPHCRINQSANKSIKTQRMMSL 168

Query: 180 RSISSSRKVNSGGLQEHTPVQYPEVVLSVEIYHNVRKGLK-------TQELLVLGRQTLT 232
           RS SS+ K+N+ GLQEH PVQ  EVVLSVEIYHN R G+K       TQELLVLG Q L+
Sbjct: 169 RSTSSATKLNTVGLQEHIPVQDSEVVLSVEIYHNFRNGVKVFSAKKKTQELLVLGGQNLS 228

Query: 233 ASRDKIFCSMDQVMQKAGQHDPSGFFLIEDVFYTDLRDPSAIDLTRPILDWVQNSKEEAQ 292
             RDKI CS DQVMQKA QHDPSG+FLIEDVFYTDLRDPSAIDLTRPILDW+QNSKEEAQ
Sbjct: 229 VLRDKINCSTDQVMQKAAQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQ 288

Query: 293 KKWEYIITGELKQKQKAIMGTVSAPRMPHFSSIEMHKIRFCDLSFRLGAGYLYCHQ 348
           KKWEYII GEL+QKQKAI+G  S   +P F+S EMHKI FCDL FRLGAGYLYCHQ
Sbjct: 289 KKWEYIINGELQQKQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQ 344