Miyakogusa Predicted Gene

Lj0g3v0048499.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0048499.1 CUFF.2246.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g082680.1 | transmembrane protein, putative | HC | chr1:36...   114   3e-26

>Medtr1g082680.1 | transmembrane protein, putative | HC |
           chr1:36809180-36808053 | 20130731
          Length = 229

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 84/127 (66%), Gaps = 9/127 (7%)

Query: 1   MLQLVSTVAFNLKILSEPLNSLAGKIARGDSNGFR---RLIGGWRGKPTR--RKRGKQ-- 53
           +LQLVST+AFNLKIL EP NSL  +IA+ +SN  R   RLI GW  K  +  ++R +Q  
Sbjct: 71  LLQLVSTLAFNLKILPEPFNSLVREIAQTNSNEHRIVNRLISGWSRKTNKSSKRRNEQMF 130

Query: 54  -LAWFASVYVAGWWSWRVSRMDLFLKVLLFCGVGVSLFRLCQGKKAIKEWFLGFLFGIVL 112
            L  F  + VAG+W++RVS +DLFLK L FC VGVS   L +  K IK+WFLGF  G VL
Sbjct: 131 LLPLFVLICVAGFWAFRVSELDLFLKSLFFCFVGVSSISLLRN-KVIKDWFLGFFLGAVL 189

Query: 113 VIGSRFG 119
           ++  R G
Sbjct: 190 MMSFRLG 196