Miyakogusa Predicted Gene

Lj0g3v0048119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0048119.1 Non Characterized Hit- tr|I1M102|I1M102_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,69.57,0,Homeodomain-like,Homeodomain-like; seg,NULL,CUFF.2242.1
         (1337 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g023280.1 | DUO pollen-like protein, putative | HC | chr2:...  1250   0.0  
Medtr2g023290.1 | F0F1 ATP synthase subunit gamma | HC | chr2:81...   516   e-146

>Medtr2g023280.1 | DUO pollen-like protein, putative | HC |
            chr2:8187592-8196160 | 20130731
          Length = 1249

 Score = 1250 bits (3234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 706/1201 (58%), Positives = 794/1201 (66%), Gaps = 56/1201 (4%)

Query: 2    NQNEVSRSDSGDRILKHVXXXXXXXXXXXXXXXXXXFNPFLKGTXXXXXXXXXXXEVDGL 61
            NQN VS SD  +R LK V                  FNP                E DGL
Sbjct: 17   NQNAVSTSDGCERSLKPVEDKEEEEEEEEEEEDAD-FNPLFLKETLSDASSSLSSEGDGL 75

Query: 62   DGNVVNSASA---ELSK----EKNCATVDSEHGEEEIVLQSPGMISQSEANQEKDNGLTS 114
            D NVV+S  +   +L K    E+ C+ VDSEHGEEEIVL++ GMISQ E ++EK N L S
Sbjct: 76   DRNVVDSGPSMDIDLEKITDNEQICSAVDSEHGEEEIVLEAAGMISQLEIDKEKKNDLIS 135

Query: 115  LTDGNGFRRGELNKTTKPQSPVIDIDSDDAICKRTRARYSLASFXXXXXXXXXXXXXXXX 174
             T  +GFR  +++ TTKP+SPVIDID++DAIC RTRARYSL  F                
Sbjct: 136  GT-SDGFRIEDISNTTKPRSPVIDIDTEDAICMRTRARYSLEGFSLDELETFLQETDDED 194

Query: 175  XXXXXXXXXXYKKFLAAVLQDGDGDGLSTHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 234
                      YKKFLAAVLQ G+ DGLS+H                              
Sbjct: 195  DVQNVDDEEEYKKFLAAVLQGGERDGLSSH-ENENLDDDEDNDADFELELQELLDSDADE 253

Query: 235  NAVVKTQKEYDGSGRRPETRQNKRRKVSAQSERKPLGQFKRPLRPILPNWQNEPPASGKD 294
            NA V+T+ E DG+GRRP+TRQN RRK S+QSERK  GQ  RPLRPILP W N    SG  
Sbjct: 254  NAAVETRNECDGAGRRPKTRQNNRRKSSSQSERKTFGQVNRPLRPILPCWLNGQLVSGNG 313

Query: 295  LMPEANPSFQSSASGNAPVNGFTPAQIGQLHSLIHEHVQLLIQVFSLSVLDPPQKHTASQ 354
            LMPEA  S QSSAS N  VNGFTP QIGQL+SLIHEHVQLLIQVFSLSVL+P  K  ASQ
Sbjct: 314  LMPEATCSIQSSASRNGLVNGFTPQQIGQLYSLIHEHVQLLIQVFSLSVLEPSHKQVASQ 373

Query: 355  VQSLLFEMLHKRDEVLASKGMPYPTVCFTPSFACTSASNGTSKFVPGQLTKASASTQDVX 414
            VQS+LFEMLHKRD VLAS   PYP VCFTPS             VPGQ    SAS QD  
Sbjct: 374  VQSMLFEMLHKRDAVLASTRTPYPAVCFTPS-------------VPGQCHTGSASIQDAM 420

Query: 415  XXXXXXXXXXXXEDLNRQRSCFQDIESTLRVPSVH----SVLDVSPLNFVRRYVNGIYSA 470
                        E LN QRSCFQD + +   P V     S+LDV+PLN +R YVN I SA
Sbjct: 421  SVRIPQYHQTSSEGLNGQRSCFQDADGSFWFPIVRGPVLSMLDVAPLNLLRGYVNDINSA 480

Query: 471  SQEFRKRYIESGCEFSFEKEPLFPSSSSFTEASTGVSSGTIPGAVRAVSTSPGQQQPKKT 530
            ++EFRKR+IESG +   EKEPLFP SSS            + GA   VS+SP ++QPKKT
Sbjct: 481  AREFRKRFIESGFDQVIEKEPLFPFSSS------------VVGANSTVSSSPDKKQPKKT 528

Query: 531  LAAMLVEST-KQSSALVPKEVAKLTQRFFSDLFNPELFPHKPPPPAVVNRILFTDSEDEL 589
            LA MLVES+ KQS ALVPKEVA  TQRF +  FNP LFPHKPP  A VNR LFTDSEDEL
Sbjct: 529  LAGMLVESSKKQSIALVPKEVASKTQRFLA-FFNPALFPHKPPLAASVNRTLFTDSEDEL 587

Query: 590  LSLGILEYNTDWKAIQQRFLPCKSKHQIFVRQKNRSSAKASENPIKAVRRMKTSPLTAEE 649
            L+LGILEYNTDW+AI+QRFLP KS HQIFVRQKNR S+K+SENPIKAVRRMKTSPLT EE
Sbjct: 588  LALGILEYNTDWEAIKQRFLPSKSTHQIFVRQKNRCSSKSSENPIKAVRRMKTSPLTEEE 647

Query: 650  IACIQEGLKHYKFDWMSVWQFIVPYRDPALLPRQWRVACGTQKSYKVDASKKDKRRSYES 709
            IACI EGLKHYK DWMSVWQ+IVP+RDP LLPRQWRVA GTQKSYKV   KK+KRR YES
Sbjct: 648  IACIDEGLKHYKSDWMSVWQYIVPHRDPFLLPRQWRVALGTQKSYKVAEGKKEKRRLYES 707

Query: 710  EXXXXXXXXXXXXXXISDKEDCEAEIMGSENCMDYSDVPYVHQAFLADWRPDTSAGTYSE 769
                            SDKEDCEAEI    + MD+SDVPYVHQAFLADWRPDTS   +SE
Sbjct: 708  GRRKSKATETECGQPRSDKEDCEAEIA---DGMDHSDVPYVHQAFLADWRPDTSTLNHSE 764

Query: 770  HISSTSGEGNLARDAVSRENIQFYRAINDYGLSGKVQHQN-YQHAFPFTPKFPQLFHTTS 828
            HISS S E NL  D+VS+++ Q YR IN+YGLSG VQHQN  Q AFP   K P  FH+TS
Sbjct: 765  HISSASAEVNLGHDSVSQDS-QLYRGINNYGLSGNVQHQNGNQPAFPSIYKLPLPFHSTS 823

Query: 829  E-RSGTKGAPCADNPKNSVF--TSSTNYYYRPYRSRKVNNAHLVKLAPDLPPVNLPPSVR 885
            + RSG KGAP A  PKN     TSS+ Y  RPYRSR+ N+AHLVKLAP LPPVNLPPSVR
Sbjct: 824  DFRSGMKGAPSATIPKNPFLGTTSSSKYCSRPYRSRRPNSAHLVKLAPGLPPVNLPPSVR 883

Query: 886  VVSQTAFKGFQCGTSKMYPPGGSVTGCRIDNIASQIPHGEKYGTAHPVEGAGPVLNGSVT 945
            VVSQTAFKGF+ GTSK++P    V   R DN ASQIPHGEK G  H  + A P+   S  
Sbjct: 884  VVSQTAFKGFETGTSKVHPCRDGVNDVRKDNSASQIPHGEKIGIDHRAKRARPMPKDSGV 943

Query: 946  GSQVERSGTAEGRSTVAEKSTCSELQMHPLLFQATNEGNIPYYPLKXXXXXXXXXXXXXX 1005
             SQ+E S TAEGRSTVAEKST ++LQMHPLLFQ T  GN  YYP K              
Sbjct: 944  HSQLESSETAEGRSTVAEKSTYADLQMHPLLFQVTEVGNTHYYPFKFNSDPSSSFSFFSG 1003

Query: 1006 XQPQLNLSLFHSSQKQSSIDCASKSLRSKNSMLRSAGIDFHPLLQKFNDTQSQACSDDIQ 1065
             QPQLNLSLF SSQ+Q  +D A+KSL+SKNS LR  GIDFHPLLQK NDTQ+   SD IQ
Sbjct: 1004 RQPQLNLSLFSSSQQQGHVDSANKSLQSKNSSLRLGGIDFHPLLQKSNDTQAPTSSDAIQ 1063

Query: 1066 AESLVNSGVLATANRSSGLNDKSNELDLDIHLSSVSRNGKSVKSKQLEVQDPIGSKKTAS 1125
            AE LVNSGV  T N SSGL DKSNELDL+IHLSSVS + KS+KS+QL+   PI S++  +
Sbjct: 1064 AEPLVNSGVPDTTNISSGLYDKSNELDLEIHLSSVSESEKSMKSRQLKEHVPIESQQIIA 1123

Query: 1126 TCGTAMKCQENSVPCRQQGVENPTTSCCELTSSAPLVVPDDNITRYDVDDVGDQSHPGIV 1185
            +  T M     + P  QQG   P+ S C L SSAPLVVPDDNITRY  DDVG+QSHP IV
Sbjct: 1124 SSATEM-----NAPYCQQGGRIPSPSGCILASSAPLVVPDDNITRY--DDVGNQSHPEIV 1176

Query: 1186 M 1186
            M
Sbjct: 1177 M 1177


>Medtr2g023290.1 | F0F1 ATP synthase subunit gamma | HC |
            chr2:8196994-8205127 | 20130731
          Length = 1021

 Score =  516 bits (1330), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 324/625 (51%), Positives = 378/625 (60%), Gaps = 53/625 (8%)

Query: 729  EDCEAEIMGSENCMDYSDVPYVHQAFLADWRPDTSAGTYSEHISSTSGEGNLARDAVSRE 788
            +DCEAEI    + MD+SDVPYVHQAFLADWRPDTS   +SEHISS S E NL  D++S++
Sbjct: 125  QDCEAEIA---DGMDHSDVPYVHQAFLADWRPDTSTLNHSEHISSASAEVNLGHDSISQD 181

Query: 789  NIQFYRAINDYGLSGKVQHQN-YQHAFPFTPKFPQLFHTTSE-RSGTKGAPCADNPKNSV 846
            + Q YR IN+YGLSG VQHQN  Q AFP   K P  FH+TS+ RSG KGAP A  PKN  
Sbjct: 182  S-QLYRGINNYGLSGNVQHQNGNQPAFPSIYKLPLPFHSTSDFRSGMKGAPSATIPKNPF 240

Query: 847  F--TSSTNYYYRPYRSRKVNNAHLVKLAPDLPPVNLPPSVRVVSQTAFKGFQCGTSKMYP 904
               TSS+ Y  RPYRSR+ N+AHLVKLAP LPPVNLPPSVRVVSQTAFKGF+ GTSK++P
Sbjct: 241  LGTTSSSKYCSRPYRSRRPNSAHLVKLAPGLPPVNLPPSVRVVSQTAFKGFETGTSKVHP 300

Query: 905  PGGSVTGCRIDNIASQIPHGEKYGTAHPVEGAGPVLNGSVTGSQVERSGTAEGRSTVAEK 964
                V   R DN ASQIPHGEK G  H  + A P+   S   SQ+E S TAEGRSTVAEK
Sbjct: 301  CRDGVNDVRKDNSASQIPHGEKIGIDHRAKRARPMPKDSGVHSQLESSETAEGRSTVAEK 360

Query: 965  STCSELQMHPLLFQATNEGNIPYYPLKXXXXXXXXXXXXXXXQPQLNLSLFHSSQKQSSI 1024
            ST ++LQMHPLLFQ T  GN  YYP K               QPQLNLSLF SSQ+Q  +
Sbjct: 361  STYADLQMHPLLFQVTEVGNTHYYPFKFKSDPSSSFSFFSGRQPQLNLSLFSSSQQQGHV 420

Query: 1025 DCASKSLRSKNSMLRSAGIDFHPLLQKFNDTQSQACSDDIQAESLVNSGVLATANRSSGL 1084
            D A+KSL+SKNS LR  GIDFHPLLQK N+TQ+   SD IQAE LVNSGV  T N SSGL
Sbjct: 421  DSANKSLQSKNSSLRLGGIDFHPLLQKSNNTQAPTSSDAIQAEPLVNSGVPDTTNISSGL 480

Query: 1085 NDKSNELDLDIHLSSVSRNGKSVKSKQLEVQDPIGSKKTASTCGTAMKCQENSVPCRQQG 1144
             DKSNELDL+IHLSSVS + KS+KS+QL+   PI S++  ++  T M     + P  QQG
Sbjct: 481  YDKSNELDLEIHLSSVSESEKSMKSRQLKEHVPIESQQIIASSATEM-----NAPYCQQG 535

Query: 1145 VENPTTSCCELTSSAPLVVPDDNITRYDVDDVGDQSHPGIVMXXXXXXXXXXXXXXHVXX 1204
               P+ S C+L SSAPLVVPDDNITRY  DDVG+QSHP IVM              HV  
Sbjct: 536  GRIPSPSGCKLASSAPLVVPDDNITRY--DDVGNQSHPEIVMEQEELRDSEEDIEEHVEF 593

Query: 1205 XXXXXXXXXXXXXXXXXNALKV-----------------QNKEVP-----RDNPGTQV-- 1240
                              A +                  Q  EVP     R N   Q+  
Sbjct: 594  ECEEMADSEGEDGSGCEQASEFECEEMSDSEEEDGSGCEQAPEVPNEEVPRANSDIQLDS 653

Query: 1241 ---TNIATLDMGLTREGKDGKNKNSWLSLDSSSTDNFEFPKAMLQRGADTIAEEDTASRN 1297
               T  A  +M L  +  D KN + + +L  S        KAMLQ+       ED+AS+N
Sbjct: 654  CLPTTDAMPNMTLISKEMDDKNSSRFKNLVPS--------KAMLQQ---VTTGEDSASKN 702

Query: 1298 STICKAVTEARHPMHIAQQRSAGPQ 1322
             +I KA     H   I Q  S GP+
Sbjct: 703  FSIGKADMGEGHSEDIVQSPSIGPR 727