Miyakogusa Predicted Gene

Lj0g3v0047429.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0047429.3 tr|G7J7I6|G7J7I6_MEDTR Neuroblastoma-amplified
sequence OS=Medicago truncatula GN=MTR_3g091940 PE=4
,81.71,0,seg,NULL; Sec39,Secretory pathway Sec39; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.2433.3
         (2260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091940.1 | secretory pathway protein Sec39 | HC | chr3:41...  3704   0.0  

>Medtr3g091940.1 | secretory pathway protein Sec39 | HC |
            chr3:41972301-41958493 | 20130731
          Length = 2391

 Score = 3704 bits (9605), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1804/2268 (79%), Positives = 1973/2268 (86%), Gaps = 14/2268 (0%)

Query: 1    MKFNGEVVAEVTKRDLKISSPIVGLFSDNGLCR------FTLITSDGWVQQIEISYGQSG 54
            +KF GEVVAE+TK+DLKIS+PIVGLFSDN          FT+ITSDG +QQIEISYG   
Sbjct: 130  IKFTGEVVAEITKKDLKISAPIVGLFSDNDSNMNDESYLFTVITSDGSLQQIEISYG-GV 188

Query: 55   STFPKCISNQRTHLCNNVFCFDCSHEHNLVAAVHQNSGSCHLSLWHKNSSTELEQLFSLQ 114
            STFPK I   R+HL NNV+CFD  HE NL AAVH  SGSCH+SLWHK SST+LEQ+FSLQ
Sbjct: 189  STFPKYICKHRSHLRNNVYCFDRHHELNLFAAVHTKSGSCHVSLWHKTSSTDLEQVFSLQ 248

Query: 115  FEGLYLKSKGYIGQLSYPKVVISPQATFVVTLDLAGCLHIFKLDKERFTLSKFFWREKDD 174
            FEGLYLK KGY GQL YPK++ISPQATF+ TLDL GCLHIFKLDKE FTLS+F   E+DD
Sbjct: 249  FEGLYLKPKGYKGQLIYPKLLISPQATFIATLDLTGCLHIFKLDKEGFTLSQFVLGERDD 308

Query: 175  SSIADNLANGGNKSLVGFMDFTWWCDHILAVVDRNGVVVLIDILNGSKIHEEDPAYFLPV 234
            SS++DNL+NGG KS VG+MDFTWWCDHI+A+VDRNGVV+LIDILN SK+ EEDPAYF P 
Sbjct: 309  SSMSDNLSNGGGKSFVGYMDFTWWCDHIIAIVDRNGVVMLIDILNVSKVQEEDPAYFFPA 368

Query: 235  LERAQKYNGYLFXXXXXXXXXXXXXXDYGLSDELHQTEWIVEDRLKEXXXXXXXXXXXXX 294
            L RAQK  GYLF              D+ LS++L QTEWIVEDRLK+             
Sbjct: 369  LGRAQKCRGYLFLLASLSSKETSSPSDFALSEDLLQTEWIVEDRLKQFHLSRLLWFLVSF 428

Query: 295  XEKSVPEMYGILISKKRYQAALDFADRHGLDKDEVLKSQWLNSSHGVNEIKMFLSNIKDR 354
             EKSVPEMYG+LI K+ YQAALDFAD HGLDKDEVLKSQWLNSS GVNEI +FL+NIKDR
Sbjct: 429  SEKSVPEMYGLLIRKRNYQAALDFADSHGLDKDEVLKSQWLNSSQGVNEINIFLANIKDR 488

Query: 355  NFVLSECVDRIGQTEDAVKALLAYGLRITVQHRFSEVDDNNSSQIWDARLARLQILQFRD 414
            NFV+ ECV RIG TEDAVKALLAYGLRIT  +RFSEVD ++SS++WD RLARLQILQ++D
Sbjct: 489  NFVVFECVHRIGPTEDAVKALLAYGLRITDHNRFSEVDSDDSSEVWDVRLARLQILQYKD 548

Query: 415  RLETYLGVNMGRFSVQEYSKFRVMPINEAARTLAESGKIGALNLLFKRHPYSLSPFMLEI 474
            RLET+LG+NMGRFSVQEYSKFR MPINEAA  LAESGKIGALNLLFKRHPYSLSPF+L++
Sbjct: 549  RLETFLGINMGRFSVQEYSKFRSMPINEAAVALAESGKIGALNLLFKRHPYSLSPFVLKV 608

Query: 475  LASIPETVPVQTYGQLLPGRSPPSGVAVRQDDWVECKKMVHFIKTSVENHDSQIHVKTEP 534
            LASIPETVP+Q Y QLLPGRS PSGVAVRQDDWVECKKMV+FI TSV+NHD QI VKTEP
Sbjct: 609  LASIPETVPIQMYVQLLPGRSFPSGVAVRQDDWVECKKMVNFINTSVKNHDIQIQVKTEP 668

Query: 535  LVKHFLGYFWPSIDELSNWYANRARAMDDFSGQLDNCLSLLEFALRKGLSELQQFHQDVL 594
            LVKHFLG  WPSIDELS WY +RARAMDDFSGQLDNCLSLLEFALRKG+SELQQFHQDVL
Sbjct: 669  LVKHFLGLLWPSIDELSKWYMDRARAMDDFSGQLDNCLSLLEFALRKGISELQQFHQDVL 728

Query: 595  YLHQIIYSDDNDSEMSFNMSLVMWVELPDYDKFKFMLKGVKEENVTERLRNRAIPFMCEK 654
            YLHQ+IYSDDNDSE  FNMSLVMW ELPDY+KFKFMLKGVKEENV ERL NRAIPFM EK
Sbjct: 729  YLHQVIYSDDNDSETGFNMSLVMWGELPDYEKFKFMLKGVKEENVIERLHNRAIPFMREK 788

Query: 655  FHRASVIGEATSSDSTNQNTEESFLVRWLKETASDNKLNICLVVIEEGCRNFQSNAFFKT 714
            FHR ++IGE T S  TNQN EESFLVRWLKE A  NKL++CLV+IEEGCRNFQSN +F+T
Sbjct: 789  FHRVTLIGEVTHS--TNQNLEESFLVRWLKEIALQNKLDMCLVIIEEGCRNFQSNVYFET 846

Query: 715  DVEAVDCALQCIYLSTITDRWSIMSAILSKLPQLHDGTIAEVENLERRLRIAEGHIEAGR 774
            +VEAVDCALQCIYL T+TDRWSIMSAILSKLPQ+HD  I + E+LE+RLR+AEGHIEAGR
Sbjct: 847  EVEAVDCALQCIYLCTVTDRWSIMSAILSKLPQMHDSAI-QAESLEKRLRVAEGHIEAGR 905

Query: 775  LLELYQVPKPLNFFLGAQSDEKGAKQIIRLILSKFIRRQPGRSDSEWASMWRDIQYLREK 834
            LL  YQVPKPLNFF GAQ DEKG KQIIRLILSKFIRRQPGRSDSEWASMWRD+QYLREK
Sbjct: 906  LLAFYQVPKPLNFFPGAQLDEKGVKQIIRLILSKFIRRQPGRSDSEWASMWRDMQYLREK 965

Query: 835  AFPFLDLEYTLIEFCRGLLKAGKFALARNYLKGTSSVALASEKAENLVIQAAREYFFSAS 894
            AFPFLDLEY LIEFCRGLLKAGKF+LARNYLKGTSSV+LASEKAE+LVIQAAREYFFSAS
Sbjct: 966  AFPFLDLEYILIEFCRGLLKAGKFSLARNYLKGTSSVSLASEKAESLVIQAAREYFFSAS 1025

Query: 895  SLSCSEIWKARECLNLYPSTGNVKAEADIIDALTVKLPNLGVNILPVQFREIKDPMEIVK 954
            SLSCSEIWKA+ECLNL PS+GNVKAEADIIDALTVKLPNLGVNILP+QFR+IKDPMEIVK
Sbjct: 1026 SLSCSEIWKAKECLNLCPSSGNVKAEADIIDALTVKLPNLGVNILPMQFRQIKDPMEIVK 1085

Query: 955  MAITNQPGAYFHVDELIEVAKLLGLRSADDXXXXXXXXXXXXXXSGDIQLAFDLCLVLAK 1014
            MAIT+Q GAYFHVDEL+EVA+LLGLRSADD              SGD+QLAFDLCLVLA+
Sbjct: 1086 MAITSQTGAYFHVDELVEVARLLGLRSADDISAVEEAIAREAAVSGDLQLAFDLCLVLAR 1145

Query: 1015 KGHGSIWDLCAAIARGSAVENMDVDSRKQLLGFSLSHCDDESIGDLLVAWKDVDMQGQCE 1074
            KGHG+IWDLCAAIARG A+ENMDVDSRKQLLGF+LSHCD+ESI +LL AWKD+DM GQCE
Sbjct: 1146 KGHGNIWDLCAAIARGPALENMDVDSRKQLLGFALSHCDEESISELLHAWKDLDMHGQCE 1205

Query: 1075 TLMMATGTNSSKFSVQGSCVNSLPKQRFQNTLDGNGCFQEFDNITTDNQDFHLEKIRDML 1134
            TL+M+TGTN S FSVQGS V SL KQ FQN LD N  FQEFD  +TDNQD HLEKI+D L
Sbjct: 1206 TLIMSTGTNPSNFSVQGSTVESLQKQSFQNILDRNVSFQEFDANSTDNQDVHLEKIKDTL 1265

Query: 1135 SIVAKTLAVGDGADWALGLTENGKALSFAAFQLPWLIELSRKGEHNKKLSTGKQYLNIRT 1194
            SIVAKTLAVG+  DWA  LTENGK LSFAA QLPWLI+LS K   N+KLSTGKQYLNIRT
Sbjct: 1266 SIVAKTLAVGNLTDWASVLTENGKVLSFAALQLPWLIDLSNKRYLNEKLSTGKQYLNIRT 1325

Query: 1195 QAVLTILSWLARNGFSPRDDLIASLAKSIMEPPVSEEEDIMGCSYLLNLVDAFNGVEVIE 1254
            QAV+TILSWLARNGF+PRD+LIASLA+S+MEPPV+E+EDI GCSYLLNLVDAFNGVEVIE
Sbjct: 1326 QAVVTILSWLARNGFAPRDNLIASLARSVMEPPVTEDEDITGCSYLLNLVDAFNGVEVIE 1385

Query: 1255 EQLKIRKDYQEICSTMNVGMAYSLLHNSGIGTDPAQXXXXXXXXXXXXHTSPNSDDIDKL 1314
            EQLKIRKDYQEICS MNVGMAYSLLHNSG+GTDP Q            HTSP+S+DIDKL
Sbjct: 1386 EQLKIRKDYQEICSIMNVGMAYSLLHNSGLGTDPVQRKEILKRRFKEKHTSPSSEDIDKL 1445

Query: 1315 GKVQSSFWREWKLKLEEQKRLTEHSRALQKIIPGVEAERFLSGDSIYIENVVVSLIESVK 1374
            GKVQSSFWREWKLKLEEQKRLTEHSRALQKIIPGVE ERFLS DSIYIENVV+SLIESVK
Sbjct: 1446 GKVQSSFWREWKLKLEEQKRLTEHSRALQKIIPGVETERFLSRDSIYIENVVISLIESVK 1505

Query: 1375 LEKKHIFKDILKLADTYDLNCTEVLLRYLTAVLVSDVWTNDDITAEVAGYKGEIISNGAK 1434
            LEK+HI KDIL+LADTYDL+ TEVLL +L+AVLVSDVWTNDDITAEVAGYK EII NG K
Sbjct: 1506 LEKRHILKDILRLADTYDLDSTEVLLHFLSAVLVSDVWTNDDITAEVAGYKEEIIGNGVK 1565

Query: 1435 TIETISTIVYPAIDGCNKLRLAYVYGLLSECYLQLETTEDLSPVVQPDHANANLRFAQYY 1494
            TIETIST VYPAIDGCNKLRL+YVYGLLSECYLQLE T+D+SP+  P+H NAN+RFA YY
Sbjct: 1566 TIETISTKVYPAIDGCNKLRLSYVYGLLSECYLQLENTKDISPIAHPEHENANIRFAHYY 1625

Query: 1495 KVIEQECKNVSFINKLNFKNIAGLRGLNFESFSDEVYACIEESSLSALSNMVQALVNMYG 1554
            KV+E+ECKNVSFIN LNFKNIAGL GLNFE F DEVYACIEESSLSALS M+QA VN+YG
Sbjct: 1626 KVVEKECKNVSFINNLNFKNIAGLHGLNFECFGDEVYACIEESSLSALSKMIQAFVNIYG 1685

Query: 1555 DSLPEGFMSWQDVYKYYIXXXXXXXETKATTD-SSRTPEFLQGFISKLEQSYDMCRMYIR 1613
            DSLP+GFMSWQDVYKYYI       ETKATTD SSRTPE LQGF+SKLEQSYD C  YIR
Sbjct: 1686 DSLPKGFMSWQDVYKYYILSSLSALETKATTDSSSRTPECLQGFLSKLEQSYDSCGKYIR 1745

Query: 1614 FLNQSDALGITKQYFTVIMPLCSSYGSLPDNSTWQECLIILLNFWIRLTDDMKEISLEES 1673
             LNQSDAL I KQY TVI+PL SSYG LPDNS WQECLI+LLNFW+RLTDDMKEISLEE+
Sbjct: 1746 LLNQSDALAIMKQYLTVIVPLHSSYGFLPDNSAWQECLIVLLNFWMRLTDDMKEISLEEN 1805

Query: 1674 PGETNSFNPQCLMTCLKVLMKLVMEDIISPSQGWGSIYAYVNCGLSGDSTVEIYNFCQAM 1733
             GE  SFNPQCL +CLKV MKLVMEDIISPSQGWGSIY YVNCGLSG  +VEIYNF +AM
Sbjct: 1806 SGEIISFNPQCLTSCLKVFMKLVMEDIISPSQGWGSIYGYVNCGLSGHCSVEIYNFSKAM 1865

Query: 1734 IFSGCGFGAISEVFSFASSETGSASNWGTGSPDLPHLYLDILEAALQELVNGSHESQKLY 1793
            +FSGCGF AI+EVFS AS ETGS+S+ GTGS DLP  Y DILEA LQELVNGSHESQ LY
Sbjct: 1866 VFSGCGFSAIAEVFSVASLETGSSSDVGTGSQDLPRFYSDILEAVLQELVNGSHESQNLY 1925

Query: 1794 PILSSLSKLEGDLKVMQCVRHVIWEKMVQFSDNLLLPSSIRVYVLELMQFISGKNIKGFS 1853
             ILSSLSK+EGDLKV+QCVRHVIWEKMV+FSDNL LPSSIRVYVLELMQFISGKNIKGFS
Sbjct: 1926 HILSSLSKIEGDLKVLQCVRHVIWEKMVKFSDNLQLPSSIRVYVLELMQFISGKNIKGFS 1985

Query: 1854 PEILANMQPWEEWDELLYASRKSETDVDKHLPDRTDSSNRFTNTLVALKSSQLVASISPS 1913
             EILAN+QPWE+WDE LYASRK ET VDK  PD  DSS+RFTNTLVALKSSQL+ SISPS
Sbjct: 1986 TEILANVQPWEDWDESLYASRKGETGVDKESPDHKDSSSRFTNTLVALKSSQLLTSISPS 2045

Query: 1914 IEITPDDLLNVGTAVSCFLRLCGEAQKDLHFDALLAILEEWDGLFNPGKDGETTAEASDV 1973
            IEITPDDLLNV TAVSCFLRLCGEA +D HFDAL++ILEEW+GLF  GKDGE T EASD 
Sbjct: 2046 IEITPDDLLNVDTAVSCFLRLCGEAIEDPHFDALVSILEEWEGLFTMGKDGEITTEASDG 2105

Query: 1974 GNDWTNDDWDEGWESLEEVDNSEKEKNEDSVSVHPLHVCWAEVLRKFISISRFSDVLSLI 2033
            GNDW NDDWDEGWESLEEVD  EKEK  DSVSVHPLHVCWAE+LRKF+S+SRFSDVL LI
Sbjct: 2106 GNDWNNDDWDEGWESLEEVDKPEKEKIVDSVSVHPLHVCWAEILRKFMSLSRFSDVLRLI 2165

Query: 2034 DQSSLKPNSVLLDEDDARSLSHIALGMDCFLALKMTLLLPYKTLQLECLSAVEDNIRQGI 2093
            DQSS KPN +LLDEDDA  L+ IAL MDCFLALKM+L+LPYKTLQL+CL AVED++RQGI
Sbjct: 2166 DQSSSKPNGMLLDEDDATRLNEIALSMDCFLALKMSLMLPYKTLQLQCLGAVEDSVRQGI 2225

Query: 2094 PEARSKDFELLVLILTSGILTSIMTDSSYGTTFSYLCYLVGNLSNQCQQALVPGRGFANS 2153
            P+ RSKD ELL+LIL+SGILTSI T S+YGTTFSYLCY+VGNLSN+CQQAL  GRGF NS
Sbjct: 2226 PQTRSKDCELLILILSSGILTSIATGSTYGTTFSYLCYMVGNLSNRCQQALASGRGFTNS 2285

Query: 2154 EDQENELLLFRRILFPYFISELVKADQHVLAGFLVTKFMHTNESLSLINIAGASLNRYLE 2213
            ED EN+   FRRILFP FI+ELVKADQHVLAGF+VTKFMHT+ESL+LI+IA ASLNRYLE
Sbjct: 2286 EDSENQ--FFRRILFPNFITELVKADQHVLAGFIVTKFMHTSESLNLISIANASLNRYLE 2343

Query: 2214 KQLHMLQGNEFHVE-KTCKTLKNTISRLRGKLSNLIQSTLPLLSASVS 2260
            +QLHMLQ NEF VE + CKTL+NT+SRLRG+L NLIQSTLPLLS SVS
Sbjct: 2344 RQLHMLQANEFQVEMECCKTLRNTVSRLRGRLINLIQSTLPLLSCSVS 2391