Miyakogusa Predicted Gene

Lj0g3v0047049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0047049.1 Non Characterized Hit- tr|D7U601|D7U601_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.19,1e-18,seg,NULL,NODE_73038_length_353_cov_109.872520.path1.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g074700.1 | hypothetical protein | HC | chr3:33755907-3375...   100   4e-22

>Medtr3g074700.1 | hypothetical protein | HC |
          chr3:33755907-33755125 | 20130731
          Length = 74

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/54 (88%), Positives = 50/54 (92%)

Query: 1  MSGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKAT 54
          M GAFWGTRVME+VKKHDS GL+WKRIKLTTTRKANAKKRL RVWQNEAVLKA 
Sbjct: 1  MGGAFWGTRVMEVVKKHDSSGLLWKRIKLTTTRKANAKKRLRRVWQNEAVLKAC 54