Miyakogusa Predicted Gene

Lj0g3v0042749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0042749.1 Non Characterized Hit- tr|G7IKI9|G7IKI9_MEDTR
Uncharacterized protein OS=Medicago truncatula GN=MTR_,71.88,8e-17,
,NODE_37624_length_634_cov_78.973183.path1.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g088590.1 | hypothetical protein | HC | chr2:37345172-3734...    91   2e-19

>Medtr2g088590.1 | hypothetical protein | HC |
           chr2:37345172-37346774 | 20130731
          Length = 174

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/64 (71%), Positives = 53/64 (82%), Gaps = 4/64 (6%)

Query: 3   MISRKIDDYQLDDYR---VDSEHHPKLKTNDCDLNFNGKKIECTNLKKRGLCLVPMSVLV 59
           MISRK+DD QLD  R     SEH+ KL+TNDCD+NFNGK IEC +LKKRGLCLVPMS+LV
Sbjct: 112 MISRKMDD-QLDGSRDRGFKSEHYQKLETNDCDMNFNGKNIECADLKKRGLCLVPMSMLV 170

Query: 60  NHYG 63
           N+YG
Sbjct: 171 NYYG 174