Miyakogusa Predicted Gene
- Lj0g3v0040399.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0040399.1 tr|B9HGU6|B9HGU6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_562855 PE=4
SV=1,26.36,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,gene.g2926.t1.1
(248 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 407 e-114
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 138 5e-33
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 132 2e-31
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 132 3e-31
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 131 5e-31
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 6e-31
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 6e-31
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 131 7e-31
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 130 8e-31
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 128 5e-30
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 127 1e-29
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 126 2e-29
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 125 3e-29
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 125 3e-29
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 7e-29
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 7e-29
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 124 1e-28
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 123 2e-28
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 3e-28
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 3e-28
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 4e-28
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 4e-28
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 122 4e-28
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 122 4e-28
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 122 4e-28
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 122 4e-28
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 122 4e-28
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 122 5e-28
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 121 6e-28
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 120 8e-28
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 120 1e-27
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 120 1e-27
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 120 2e-27
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 119 2e-27
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 119 4e-27
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 119 4e-27
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 118 7e-27
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 117 8e-27
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 8e-27
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 1e-26
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 117 1e-26
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 1e-26
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 116 2e-26
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 2e-26
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 115 4e-26
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 5e-26
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 115 5e-26
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 7e-26
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 114 7e-26
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 7e-26
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 114 9e-26
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 114 9e-26
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 114 1e-25
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 113 1e-25
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 113 2e-25
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 113 2e-25
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 113 2e-25
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 113 2e-25
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 113 2e-25
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 113 2e-25
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 112 2e-25
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 112 3e-25
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 112 4e-25
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 112 4e-25
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 112 4e-25
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 112 4e-25
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 112 4e-25
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 112 4e-25
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 112 4e-25
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 112 4e-25
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 112 4e-25
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 112 4e-25
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 112 4e-25
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 6e-25
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 111 6e-25
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 111 6e-25
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 111 7e-25
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 111 7e-25
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 110 1e-24
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 110 1e-24
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 110 1e-24
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 110 1e-24
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 110 2e-24
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 2e-24
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 109 2e-24
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 2e-24
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 109 2e-24
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 2e-24
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 109 3e-24
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 3e-24
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 109 3e-24
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 108 3e-24
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 3e-24
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 108 3e-24
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 108 3e-24
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 108 4e-24
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 108 4e-24
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 108 4e-24
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 108 4e-24
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 108 4e-24
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 108 4e-24
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 108 5e-24
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 108 5e-24
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 108 6e-24
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 108 7e-24
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 107 8e-24
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 107 9e-24
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 107 1e-23
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 107 1e-23
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 107 1e-23
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 107 1e-23
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 107 1e-23
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 106 2e-23
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 106 2e-23
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 106 2e-23
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 106 2e-23
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 2e-23
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 106 3e-23
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 106 3e-23
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 106 3e-23
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 105 3e-23
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 105 3e-23
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 105 4e-23
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 105 5e-23
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 105 5e-23
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 105 5e-23
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 104 6e-23
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 104 7e-23
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 104 1e-22
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 1e-22
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 103 1e-22
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 103 1e-22
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 103 1e-22
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 103 1e-22
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 103 2e-22
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 103 2e-22
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 102 3e-22
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 3e-22
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 102 3e-22
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 102 4e-22
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 102 4e-22
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 5e-22
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 5e-22
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 5e-22
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 5e-22
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 101 6e-22
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 101 6e-22
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 7e-22
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 101 7e-22
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 100 9e-22
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 100 1e-21
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 1e-21
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 100 2e-21
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 100 2e-21
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 100 2e-21
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 2e-21
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 2e-21
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 99 3e-21
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 99 4e-21
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 99 4e-21
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 99 4e-21
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 99 5e-21
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 6e-21
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 7e-21
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 1e-20
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 97 1e-20
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 97 1e-20
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 1e-20
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 97 1e-20
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 96 2e-20
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 96 2e-20
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 96 2e-20
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 96 2e-20
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 3e-20
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 96 3e-20
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 95 5e-20
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 95 6e-20
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 7e-20
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 95 7e-20
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 8e-20
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 94 1e-19
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 93 2e-19
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 2e-19
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 93 3e-19
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 92 3e-19
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 92 4e-19
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 4e-19
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 92 4e-19
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 92 4e-19
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 92 6e-19
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 91 7e-19
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 7e-19
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 9e-19
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 91 9e-19
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 91 9e-19
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 91 1e-18
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 91 1e-18
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 90 2e-18
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 90 2e-18
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 90 2e-18
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 90 3e-18
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 89 4e-18
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 5e-18
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 88 9e-18
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 87 1e-17
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 87 1e-17
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 87 1e-17
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 87 1e-17
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 87 1e-17
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 87 2e-17
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 87 2e-17
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 87 2e-17
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 86 2e-17
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 86 2e-17
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 86 2e-17
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 86 3e-17
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 86 3e-17
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 86 3e-17
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 86 3e-17
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 85 8e-17
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 8e-17
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 8e-17
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 84 1e-16
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 83 2e-16
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 82 4e-16
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 5e-16
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 82 6e-16
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 82 7e-16
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 81 1e-15
Medtr2g104640.1 | PPR containing plant-like protein | HC | chr2:... 81 1e-15
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 81 1e-15
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 80 1e-15
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 80 1e-15
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 80 2e-15
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 80 2e-15
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 80 2e-15
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 79 3e-15
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 79 4e-15
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 4e-15
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 79 4e-15
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 5e-15
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 78 6e-15
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 78 8e-15
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 78 8e-15
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 9e-15
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 77 1e-14
Medtr2g018820.1 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr2g018820.2 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 76 3e-14
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 76 4e-14
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr6g079340.1 | PPR containing plant-like protein | LC | chr6:... 75 5e-14
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 75 6e-14
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 75 7e-14
Medtr4g123860.1 | PPR containing plant-like protein | HC | chr4:... 74 9e-14
Medtr5g048070.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 74 2e-13
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 73 2e-13
Medtr5g088490.2 | PPR containing plant-like protein | LC | chr5:... 73 3e-13
Medtr5g088490.1 | PPR containing plant-like protein | LC | chr5:... 73 3e-13
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 3e-13
Medtr1g034420.1 | PPR superfamily protein | LC | chr1:12536372-1... 72 3e-13
Medtr6g071320.1 | PPR containing plant-like protein | HC | chr6:... 72 3e-13
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 72 3e-13
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 72 3e-13
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 4e-13
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr8g098445.1 | PPR containing plant-like protein | HC | chr8:... 72 5e-13
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 72 7e-13
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 71 7e-13
Medtr8g098955.1 | PPR containing plant-like protein | HC | chr8:... 71 8e-13
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 71 8e-13
Medtr5g019860.1 | PPR containing plant-like protein | HC | chr5:... 71 8e-13
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 71 9e-13
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 71 1e-12
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 71 1e-12
Medtr4g108900.1 | PPR containing plant-like protein | HC | chr4:... 70 1e-12
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 1e-12
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 70 1e-12
Medtr8g107230.1 | PPR containing plant-like protein | HC | chr8:... 70 2e-12
Medtr5g088510.1 | PPR containing plant-like protein | LC | chr5:... 69 3e-12
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 4e-12
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 69 5e-12
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 69 5e-12
Medtr0086s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 68 8e-12
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 68 8e-12
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 68 8e-12
Medtr8g058400.1 | PPR containing plant-like protein | HC | chr8:... 68 9e-12
Medtr7g028623.1 | PPR containing plant-like protein | HC | chr7:... 68 1e-11
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 67 1e-11
Medtr2g007050.1 | PPR containing plant-like protein | HC | chr2:... 67 1e-11
Medtr1g022360.1 | nuclear fusion defective-like protein | HC | c... 67 2e-11
Medtr1g037260.1 | PPR containing plant protein | HC | chr1:13702... 67 2e-11
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 66 3e-11
Medtr3g053000.1 | PPR containing plant-like protein | HC | chr3:... 66 3e-11
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 66 3e-11
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 66 3e-11
Medtr0001s0430.1 | pentatricopeptide (PPR) repeat protein | HC |... 66 4e-11
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 4e-11
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 5e-11
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 65 6e-11
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 65 7e-11
Medtr4g097120.1 | PPR containing plant-like protein | HC | chr4:... 65 9e-11
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 64 9e-11
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 64 1e-10
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 64 1e-10
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 1e-10
Medtr1g054680.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 64 2e-10
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 63 3e-10
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 62 5e-10
Medtr1g039290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 6e-10
Medtr7g100550.1 | PPR containing plant-like protein | HC | chr7:... 62 6e-10
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 8e-10
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 61 1e-09
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr5g044120.1 | PPR containing plant-like protein | HC | chr5:... 61 1e-09
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 61 1e-09
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 61 1e-09
Medtr8g072150.1 | PPR containing plant-like protein | HC | chr8:... 60 1e-09
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 60 2e-09
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 60 2e-09
Medtr6g021740.1 | PPR containing plant-like protein | HC | chr6:... 60 2e-09
Medtr1g085280.1 | ribosomal protein L15 | HC | chr1:38067122-380... 60 2e-09
Medtr5g019030.1 | PPR containing plant-like protein | HC | chr5:... 60 3e-09
Medtr8g059115.1 | PPR containing plant-like protein | HC | chr8:... 59 3e-09
Medtr8g091670.1 | PPR containing plant-like protein | HC | chr8:... 59 4e-09
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr6g079320.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 6e-09
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 59 6e-09
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 7e-09
Medtr3g052970.1 | PPR containing plant-like protein | HC | chr3:... 58 8e-09
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 58 8e-09
Medtr1g036840.1 | PPR containing plant protein | LC | chr1:13563... 58 9e-09
Medtr1g021250.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 9e-09
Medtr6g047970.1 | membrane-associated salt-inducible protein | L... 58 1e-08
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 57 1e-08
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 57 2e-08
Medtr7g005780.1 | PPR containing plant protein | HC | chr7:35224... 57 2e-08
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 57 2e-08
Medtr0252s0060.1 | PPR containing plant-like protein | LC | scaf... 57 2e-08
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr5g008255.1 | ATP-binding; nucleic acid-binding; helicase, p... 56 3e-08
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 56 3e-08
Medtr5g044930.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr5g045620.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 55 4e-08
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 55 5e-08
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 55 5e-08
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 55 5e-08
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 55 7e-08
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 55 7e-08
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 55 8e-08
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 55 9e-08
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 55 9e-08
Medtr6g080140.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 9e-08
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 55 9e-08
Medtr3g081310.1 | PPR containing plant protein | HC | chr3:36828... 54 9e-08
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr0220s0090.1 | PPR repeat protein | HC | scaffold0220:28003-... 54 1e-07
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 54 1e-07
Medtr7g069270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr4g104860.1 | PPR containing plant protein | HC | chr4:43443... 54 2e-07
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr5g006420.1 | organelle transcript processing protein, putat... 54 2e-07
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 54 2e-07
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 53 2e-07
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 53 3e-07
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 53 3e-07
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 53 3e-07
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 53 3e-07
Medtr1g009650.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 53 3e-07
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 53 3e-07
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 52 4e-07
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 52 4e-07
Medtr3g053780.1 | PPR containing plant-like protein | HC | chr3:... 52 4e-07
Medtr7g069290.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 5e-07
Medtr8g069570.1 | PPR containing plant protein | HC | chr8:29205... 52 5e-07
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 52 5e-07
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 52 6e-07
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 52 6e-07
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 52 7e-07
Medtr5g092040.1 | PPR containing plant protein | LC | chr5:40187... 52 7e-07
Medtr7g070170.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 8e-07
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 51 8e-07
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 8e-07
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 51 8e-07
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 8e-07
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 51 9e-07
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 51 9e-07
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 51 1e-06
Medtr8g094650.1 | PPR containing plant protein | HC | chr8:39524... 51 1e-06
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 51 1e-06
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 51 1e-06
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 51 1e-06
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 50 1e-06
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 50 2e-06
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 50 2e-06
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 50 2e-06
Medtr4g084940.1 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 50 3e-06
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 50 3e-06
Medtr3g067670.1 | PPR containing plant-like protein | HC | chr3:... 50 3e-06
Medtr3g067670.2 | PPR containing plant-like protein | HC | chr3:... 50 3e-06
Medtr2g090885.3 | PPR containing plant-like protein | HC | chr2:... 50 3e-06
Medtr2g090885.2 | PPR containing plant-like protein | HC | chr2:... 50 3e-06
Medtr2g090885.4 | PPR containing plant-like protein | HC | chr2:... 50 3e-06
Medtr2g090885.1 | PPR containing plant-like protein | HC | chr2:... 50 3e-06
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 50 3e-06
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr7g026120.1 | PPR repeat protein | HC | chr7:8651033-8651672... 49 3e-06
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 49 3e-06
Medtr1g008360.1 | PPR containing plant-like protein | HC | chr1:... 49 3e-06
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 49 3e-06
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 3e-06
Medtr3g030450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 49 4e-06
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 49 4e-06
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 5e-06
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 49 5e-06
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 49 5e-06
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 49 5e-06
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 49 5e-06
Medtr3g052720.1 | organelle transcript processing protein, putat... 49 6e-06
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 6e-06
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 7e-06
Medtr0086s0070.1 | pentatricopeptide (PPR) repeat protein | HC |... 48 7e-06
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 48 8e-06
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 48 8e-06
Medtr7g069310.1 | PPR repeat protein | LC | chr7:25544573-255438... 48 8e-06
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 9e-06
Medtr1g034440.1 | PPR superfamily protein | LC | chr1:12539755-1... 48 9e-06
>Medtr7g072070.1 | PPR containing plant-like protein | HC |
chr7:26781971-26778389 | 20130731
Length = 492
Score = 407 bits (1045), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/246 (82%), Positives = 222/246 (90%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRKLGFCPGVMD T+MIRFLVKE +GMDAL ILNQ+K+DGIKPD+VCYTIVLSGIV EGD
Sbjct: 246 MRKLGFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGD 305
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
YVKLDELFDE+LVLGL+PDVYTYNVYINGLCKQN DEA++IV SM KLGCKPNVVT NT
Sbjct: 306 YVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNT 365
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LLGALC +GDL KAK VMKEM LKGVELNLHTYRIMLDGLVGK EIGEA +LLEEML+KC
Sbjct: 366 LLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKC 425
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
FYPRSSTFD+I+ MCQKGLI++AL LM KIVAKSF PGA+ WEALLL+S S +TYSETT
Sbjct: 426 FYPRSSTFDSIVHQMCQKGLISDALVLMNKIVAKSFDPGAKVWEALLLNSESKVTYSETT 485
Query: 241 FAGLFN 246
FAGL +
Sbjct: 486 FAGLLS 491
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 124/227 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRK G P + +T +I K A + ++M++ I PD+V YT V+ GI G
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ E+F+EMLV GL PD TY I+G CK ++ EA + + M++ G PNVVT
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L LC+ G++ A ++ EM KG++ N++TY +++GL I + L+EEM
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
FYP + T+ ++ C+ G + +A EL++ ++ K P + L+
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 121/223 (54%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++I L K ++A +L M++ G+ PD V YT V+SG G+
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LFDEM ++PD+ TY I+G+CK K+ EA ++ + M+ G +P+ VT L+
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+AG++ +A V +M KG+ N+ TY + DGL EI A+ LL EM +K P
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ I+ +C+ G I + ++LM+++ F P + L+
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ P ++ +T +I + K + ++A + N+M G++PD V YT ++ G G+
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++M+ GL P+V TY +GLCK ++D A +++ M + G +PNV T NT
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ G++ + +M+EM L G + TY ++D E+ +A LL ML K
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ ++ C G++ + L++ ++ K P A + +L+
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 120/223 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +T +I K +A + NQM Q G+ P+VV YT + G+ G+
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+EL EM GL P+VYTYN +NGLCK +++ +++++ M G P+ +T TL+ A
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G+++KA +++ M K ++ L T+ ++++G + + L+E ML+K P
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++TF++++ C K + E+ K + + P + + L+
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ +T + L K A +L++M + G++P+V Y +++G+ G+
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L +EM + G PD TY ++ CK ++ +A +++ M+ +P +VT N
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C +G L + +++ M KG+ N T+ ++ K + + + + M +
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S+T++ +I C+ + EA L K++V K ++ A ++AL+
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALI 669
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V + ++ L K + ++ +M G PD + YT ++ G+
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL ML L P + T+NV +NG C +++ ++++ M++ G PN T N+
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C ++ + K M +GV + +TY I++ G + EA L +EM++K
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+ ++T+D +I ++ EA +L +++
Sbjct: 658 YSVTAATYDALIRGFYKRKKFVEARKLFEEM 688
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 112/224 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+LG C + ++ L + + +A +L QM G PDVV Y +V+SG G+
Sbjct: 235 ELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELD 294
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K+ +L DE+ GL PD Y YN I LCK +V EA Q++ M K G P+ V T++
Sbjct: 295 KVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVI 354
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ G++S A + EM K + ++ TY ++ G+ ++ EA + EML K
Sbjct: 355 SGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE 414
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
P T+ +I C+ G + EA + ++V K P + AL
Sbjct: 415 PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL 458
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +T ++ K A +L M ++P +V + ++++G G
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG 576
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ L + ML G++P+ T+N + C +N + +I +M G P+ T N L+
Sbjct: 577 ERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+A ++ +A + KEM KG + TY ++ G + + EA L EEM K
Sbjct: 637 HCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696
Query: 185 SSTFDNIICCMCQKGLINEALEL 207
+D + ++G LEL
Sbjct: 697 KDIYDIFVDVNYEEGNWEITLEL 719
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 99/199 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + + + G+ + V IVL + G + L +M G PDV +Y V ++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C+ ++D+ +++VD + G KP+ N ++ LC+ G++ +A+ +++ M GV
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ Y ++ G + A L +EM +K P T+ ++I +C+ G + EA E+
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Query: 209 KKIVAKSFAPGARAWEALL 227
+++ K P + AL+
Sbjct: 406 NEMLVKGLEPDEVTYTALI 424
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL-CKQNK 95
K G P V + + +V G ++ +LF ++L G++ V + N++++ L C
Sbjct: 165 KDWGSHPLV--FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEG 222
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+ A+++ + +LG N V+CN +L LC+ G + +A ++ +M +G ++ +Y +
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++ G E+ + L++E+ K P ++NII +C+ G + EA +L++
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLR------ 336
Query: 216 FAPGARAW 223
G R W
Sbjct: 337 ---GMRKW 341
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 127/221 (57%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + K++ DA + ++M GI P+VV Y+ ++SG G +L
Sbjct: 225 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDL 284
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M+ + PDVYT+N+ ++ CK K+ A+++VD M G PN+VT +++L ALC+
Sbjct: 285 FNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 344
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ KA ++ ++ +G+ N+HTY I++DGL ++ +A + E++L K + T
Sbjct: 345 THRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVT 404
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ + C+KGL +EA L+ K+ P A+ +E + L
Sbjct: 405 YIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKL 445
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 109/206 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ +I + DA+ + N+M + IKPDV + I++ G
Sbjct: 257 GISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYA 316
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM G P++ TY+ ++ LCK ++VD+A+ ++ + G +PN+ T L+
Sbjct: 317 LKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDG 376
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC +G L A+ + +++ +KG ++ + TY +M G K EAS LL +M + P
Sbjct: 377 LCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPD 436
Query: 185 SSTFDNIICCMCQKGLINEALELMKK 210
+ T++ I + +KG + A +L ++
Sbjct: 437 AKTYELIKLSLFKKGENDMAEKLHRE 462
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++F ++ LVK + LY+ +M+ GIKP++V I+++ G +
Sbjct: 85 PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L +G P+ T+ I GLC + ++ +A+ D ++ LG + N ++ TL+ LC+
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + K V+ N+ Y ++DG+ + +A L EM+ K P T
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I G + +A++L K+++++ P + L+
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILV 304
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N + + P + + +L +V Y + L +M G+ P++ N+ I
Sbjct: 70 DAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILI 129
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+ + A + ++K+G PN +T TL+ LC G + +A ++ G +
Sbjct: 130 NCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQ 189
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N +Y ++DGL E A LL + K P + II MC+ +N+A +L
Sbjct: 190 FNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDL 249
Query: 208 MKKIVAKSFAPGARAWEALL 227
++V+K +P + AL+
Sbjct: 250 YSEMVSKGISPNVVTYSALI 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 100/199 (50%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G P+ + +T ++ G+ +G + D+++ LG + +Y I+
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+ ++ + +PNVV +T++ +C+ ++ A + EM KG+
Sbjct: 201 GLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 260
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY ++ G ++ +A L +M+ + P TF+ ++ C+ G I+ AL+L+
Sbjct: 261 NVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLV 320
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + P + ++L
Sbjct: 321 DEMHDRGQPPNIVTYSSIL 339
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K R A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 323 MHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGK 382
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G V TY V G CK+ DEA ++ M + GC P+ T
Sbjct: 383 LEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYEL 442
Query: 121 LLGALCEAGDLSKAKGVMKE 140
+ +L + G+ A+ + +E
Sbjct: 443 IKLSLFKKGENDMAEKLHRE 462
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
K +++ Y+ + + D LF+ +L P +N + L K +
Sbjct: 49 KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+ M G KPN+V CN L+ C+ G + A V ++ G N T+ ++ GL
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
K +I +A ++++ F ++ +I +C+ G AL+L++++ K P
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228
Query: 222 AWEALL 227
+ ++
Sbjct: 229 MYSTII 234
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 134/227 (59%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + ++ + AL I N M Q+G++P+V CY I+++G+ +
Sbjct: 208 MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKR 267
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF EM + PDV TYN+ I+GLCK K+ ++++VD M +G +++T N+
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL ALC+ L +A ++KE+ +G++ N+ TY ++DGL + +A ++ +E+L +
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ T++ +I +C+KGL +EAL L+ ++ + P A ++E ++
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETII 434
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V + +I L K++R +A+ + +M I PDVV Y I++ G+ G
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM +G D+ TYN ++ LCK + +D+AI +V + G +PNV T T
Sbjct: 303 ISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTT 362
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A + +E+ +G + + TY +M++GL K EA LL M
Sbjct: 363 LIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNA 422
Query: 181 FYPRSSTFDNIICCMCQKG 199
P + +++ II + +KG
Sbjct: 423 CIPDAVSYETIIYALSEKG 441
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 32/241 (13%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD-- 60
K+G+ P + FT +I+ + + +AL + + G K D V Y I+++G+ G+
Sbjct: 73 KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132
Query: 61 ---------YVKLD---------------------ELFDEMLVLGLIPDVYTYNVYINGL 90
+V D L+ EM+ G+ P+VYT+++ ++ L
Sbjct: 133 AAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
CK K +A+ ++ M+K G KPNVVT ++ C ++KA + M +GVE N+
Sbjct: 193 CKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNV 252
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
Y I+++GL K + EA L +EM K P T++ +I +C+ G I+ +LEL+ +
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312
Query: 211 I 211
+
Sbjct: 313 M 313
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+RK V+ ++ +I L K + DA + ++M GI P+V ++I++ + +
Sbjct: 138 LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRK 197
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L M+ G+ P+V TY ++G C N+V++A+ I + M++ G +PNV N
Sbjct: 198 GKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNI 257
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ + +A + KEM K + ++ TY I++DGL +I + L++EM
Sbjct: 258 IINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIG 317
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+++++ +C+ +++A+ L+K+I + P + L+
Sbjct: 318 KTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLI 364
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR +G ++ + ++ L K A+ ++ ++K GI+P+V YT ++ G+ +G
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F E+L G V+TYNV INGLCK+ DEA+ ++ M C P+ V+ T
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYET 432
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
++ AL E G+ K ++ M ++G+ L
Sbjct: 433 IIYALSEKGETVKTNKLLCAMIVRGLSKRL 462
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++ P ++ F ++ LVK A+ + Q++ +GIKP +V TI+++ G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L + ++L +G P+ T+ I G+C + EA+ D ++ G K + V+
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G+ + M+ + V ++ Y ++D L + +A L EM+ K
Sbjct: 121 LMNGLCKMGE---TRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P TF ++ +C+ +A+ L+ ++ K P + A++
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 121/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K + +A + ++M GI PDVV Y+ ++SG G +L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M++ + PDVYT+N+ +N CK K+ E + D M+K G KPN VT N+L+ C
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK + M GV ++ +Y IM++G + EA L +EM +K P T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I + + G I+ AL+L+ ++ + P R + ++L
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 123/230 (53%), Gaps = 4/230 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P + + ++ LVKE A I N M Q G+ PD+ Y+I+++G
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVN--KAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ + LF EM +IPDV TY+ I+GL K ++ A+Q+VD M G P + T
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTY 438
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N++L ALC+ + KA ++ ++ KG++ N++TY I++ GL ++ +A + E +L
Sbjct: 439 NSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLV 498
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
K T+ +I C +GL NEAL L+ K+ P A+ +E ++L
Sbjct: 499 KGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 121/224 (54%), Gaps = 1/224 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + ++ MI K ++ +A+ + +M + I PDVV Y+ ++ G+ G
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L D+M G+ P + TYN ++ LCK ++VD+AI ++ + G +PN+ T +
Sbjct: 416 ISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC++G L A+ V + + +KG LN+ TY IM+ G + EA LL +M
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA-W 223
P + T++ II + +K + A +L+++++A+ P A W
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIW 579
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 121/242 (50%), Gaps = 2/242 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ +I + DA+ + N+M + IKPDV + I+++ +G +
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+FD M+ G+ P+ TYN ++G C +V++A I ++M + G P++ + + ++
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ +A + KEM K + ++ TY ++DGL I A L+++M + P
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFA 242
T+++I+ +C+ +++A+ L+ K+ K P + L+ L L + F
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494
Query: 243 GL 244
GL
Sbjct: 495 GL 496
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 109/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +F ++ LVK + LY+ +M+ GIKP++V I+++ G +
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L +G +PD T+ I GLC + ++ +A D ++ LG + ++ TL+ LC+
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + V+ N+ Y ++D + + EA L EM+ K P T
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C G +N+A++L K++ ++ P + L+
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N++ + P + +L +V Y + L +M G+ P++ N+ I
Sbjct: 68 DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+ + A + ++K+G P+ +T TL+ LC G + +A ++ G
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH 187
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ +Y ++ GL E A LL+ + P ++ II MC+ L+NEA +L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 208 MKKIVAKSFAPGARAWEALL 227
++++K +P + AL+
Sbjct: 248 FSEMISKGISPDVVTYSALI 267
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 98/199 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G PD + +T ++ G+ +G + D+++ LG D +Y I+
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+ ++ + +PNVV NT++ ++C+ +++A + EM KG+
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G ++ +A L +M+ + P TF+ ++ C+ G + E +
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 319 DMMMKQGIKPNFVTYNSLM 337
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 126/220 (57%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + K++ DA + ++M GI P+VV Y+ ++SG G +L
Sbjct: 222 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 281
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M++ + PDVYT+N+ ++G CK K+ E + M+K G KPNVVT +L+ C
Sbjct: 282 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 341
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK ++ M +GV ++ +Y I++DG ++ EA L +EM K P T
Sbjct: 342 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 401
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ AL+L+ ++ + P + ++L
Sbjct: 402 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 441
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ + ++ LVKE A IL M Q G+ PD+ Y I++ G
Sbjct: 320 MMKQGIKPNVVTYCSLMDGYCLVKEVN--KAKSILYTMSQRGVNPDIQSYNILIDGFCKI 377
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF EM +IPDV TYN I+GLCK K+ A+++VD M G P+++T
Sbjct: 378 KKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITY 437
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++L ALC+ + KA ++ ++ +G+ N++TY I++DGL + +A + E++L
Sbjct: 438 SSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 497
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + +T+ +I C KGL +EAL L+ K+ S P A +E ++
Sbjct: 498 KGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPDAVTYEIII 546
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + +I K ++ +A+ + +M I PDVV Y ++ G+ G
Sbjct: 355 MSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGK 414
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G+ PD+ TY+ ++ LCK ++VD+AI ++ + G +PN+ T
Sbjct: 415 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 474
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A + +++ +KG + ++TY +M+ G K EA LL +M
Sbjct: 475 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNS 534
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + K N+ E +++++ +
Sbjct: 535 CIPDAVTYEIIIRSLFDKDE-NDKAEKLREMITR 567
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 108/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++F ++ LVK + L + QM+ +GI PD + I+++ G +
Sbjct: 82 PPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFTFNILINCFCQLGLIPFAFSV 141
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L +G P+ T+ I GLC + ++ +A+ D+++ +G + + V TL+ LC+
Sbjct: 142 FAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCK 201
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + V+ N+ Y ++DG+ + +A L EM+ K P T
Sbjct: 202 VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 261
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I G + +A++L K++ ++ P + L+
Sbjct: 262 YSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILV 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+DA + +++ + P + + +L +V Y + L +M G+ PD +T+N+
Sbjct: 66 VDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFTFNIL 125
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
IN C+ + A + ++++G PN +T TL+ LC G + +A + G
Sbjct: 126 INCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGF 185
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+L+ Y ++ GL E A LL + P + II MC+ +N+A +
Sbjct: 186 QLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFD 245
Query: 207 LMKKIVAKSFAPGARAWEALL 227
L ++V+K +P + AL+
Sbjct: 246 LYSEMVSKGISPNVVTYSALI 266
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 94/199 (47%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G P+ + +T ++ G+ +G + D ++ +G D Y I+
Sbjct: 138 AFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIH 197
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+ ++ + +PNVV +T++ +C+ ++ A + EM KG+
Sbjct: 198 GLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 257
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY ++ G ++ +A L +M+ + P TF+ ++ C+ G + E +
Sbjct: 258 NVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 317
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 318 AMMMKQGIKPNVVTYCSLM 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 63/135 (46%)
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
N V +A + +++ P + N +LG+L ++ + ++M +G+ + T
Sbjct: 62 NNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPDFFT 121
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ I+++ I A + ++L+ ++P + TF +I +C KG I++AL +V
Sbjct: 122 FNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVV 181
Query: 213 AKSFAPGARAWEALL 227
A F + L+
Sbjct: 182 AMGFQLDQVGYGTLI 196
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 127/227 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ ++ ++ ++ A I N M Q G+ PD+ Y+I+++G+
Sbjct: 138 MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKM 197
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF+EM +IPDV TYN I+GLCK K+ A+++VD M G P+++T ++
Sbjct: 198 TDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 257
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L ALC+ + KA ++ + +G+ N++TY I++DGL + +A + E++L K
Sbjct: 258 ILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 317
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +T+ +I C KGL +EAL L+ K+ S P A +E ++
Sbjct: 318 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K++ DA + ++M I PDV Y ++SG G L
Sbjct: 40 PSVVMYNTIIDGMCKDKHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGL 99
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + + PD+YT+N+ ++ CK+ K+ EA ++ M+K G KPNVVT + L+ C
Sbjct: 100 FNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCL 159
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M GV ++H+Y I+++GL EA L EEM + P T
Sbjct: 160 VKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ AL+L+ ++ + P + ++L
Sbjct: 220 YNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 259
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 116/214 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + ++ +I L K + +A+ + +M I PDVV Y ++ G+ G
Sbjct: 173 MAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGK 232
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G+ PD+ TY+ ++ LCK ++VD+AI ++ ++ G +PN+ T
Sbjct: 233 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTI 292
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A + +++ +KG + ++TY +M+ G K EA LL +M
Sbjct: 293 LIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS 352
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+P + T++ II + K ++A +L+++++ +
Sbjct: 353 CFPNALTYEIIIRSLFDKDENDKAEKLLREMITR 386
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + +I + DA+ + N+M + I PD+ + I++ EG + +
Sbjct: 75 PDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNV 134
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ P+V TY+ ++G C KV++A I ++M + G P++ + + L+ LC+
Sbjct: 135 LAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCK 194
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+A + +EM + + ++ TY ++DGL +I A L++EM + P T
Sbjct: 195 IKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIIT 254
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLF 245
+ +I+ +C+ +++A+ L+ + + P + L+ L G L + F L
Sbjct: 255 YSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 78/146 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K + A+ +L +K GI+P++ YTI++ G+ G
Sbjct: 243 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGR 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G V TY V I+G C + DEA+ ++ M C PN +T
Sbjct: 303 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 362
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + KA+ +++EM +G+
Sbjct: 363 IIRSLFDKDENDKAEKLLREMITRGL 388
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 128/227 (56%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ ++ ++ ++ A I N M Q G+ PD+ Y+I+++G+
Sbjct: 138 MMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKM 197
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF+EM +IPDV TYN I+GLCK K+ A+++VD M G P+++T ++
Sbjct: 198 TDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 257
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L ALC+ + KA ++ ++ +G+ N++TY I++DGL + +A + E++L K
Sbjct: 258 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLLVKG 317
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +T+ +I C KGL +EAL L+ K+ S P A +E ++
Sbjct: 318 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K++ DA + ++M I PDV Y ++SG G L
Sbjct: 40 PSVVMYNTIIDGMCKDKHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGL 99
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + + PD+YT+N+ ++ CK+ K+ EA ++ M+K G KPNVVT + L+ C
Sbjct: 100 FNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCL 159
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M GV ++H+Y I+++GL EA L EEM + P T
Sbjct: 160 VKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVT 219
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ AL+L+ ++ + P + ++L
Sbjct: 220 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 259
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + +I + DA+ + N+M + I PD+ + I++ EG + +
Sbjct: 75 PDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNV 134
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ P+V TY+ ++G C KV++A I ++M + G P++ + + L+ LC+
Sbjct: 135 LAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCK 194
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+A + +EM + + ++ TY ++DGL +I A L++EM + P T
Sbjct: 195 IKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIIT 254
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLF 245
+ +I+ +C+ +++A+ L+ K+ + P + L+ L G L + F L
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLL 314
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K + A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 243 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G V TY V I+G C + DEA+ ++ M C PN +T
Sbjct: 303 LDDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 362
Query: 121 LLGAL 125
++ +L
Sbjct: 363 IIRSL 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L K + AL ++++M G+ PD++ Y+ +L + K L
Sbjct: 215 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 274
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ G+ P++YTY + I+GLCK ++D+A I + ++ G V T ++ C
Sbjct: 275 LTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 334
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
G +A ++ +M N TY I++ L
Sbjct: 335 KGLFDEALALLSKMKDNSCFPNALTYEIIIRSL 367
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 123/227 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K GF P V+ + +I R AL +++Q+ +D KP V+ YTI++ + +G
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG 231
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L DEML GL PD YTYNV +NG+CK+ +D A + + + K GC V T N
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL L G + +M +M +KG E N TY ++ L +I EA +L+ M +K
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++D +I +C++G ++ A+E + +++ P ++ ++L
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSIL 398
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
++LY L M G KPDV+ T ++ G K ++ E+L PDV+ YN I
Sbjct: 95 ESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVI 153
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK ++VD A +++D M K G +P+VVT N L+G C G L A VM ++ +
Sbjct: 154 SGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCK 213
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ TY I+++ + + I EA LL+EML + P T++ ++ MC++G+++ A E
Sbjct: 214 PTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF 273
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ +I G + LL
Sbjct: 274 LSRISKNGCVAGVSTYNILL 293
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K G GV + ++R L+ E + +++ M G +P+ + Y+ +++ + +G
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDG- 335
Query: 61 YVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K+DE + + V+ L PD Y+Y+ I+ LC++ KVD AI+ +D MI G P++++
Sbjct: 336 --KIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILS 393
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N++L +LC+ G+ +A + +++G G N +Y + L + A ++ EML
Sbjct: 394 YNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEML 453
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELM 208
P T++++I C+C+ GL+++A+EL+
Sbjct: 454 SNGIDPDEITYNSLISCLCRDGLVDQAIELL 484
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 40/264 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G+ P V+ T +I+ ++ A+ ++ +++ G KPDV Y V+SG
Sbjct: 103 MVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADR 161
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ D M G PDV TYN+ I C + ++D A++++D ++K CKP V+T
Sbjct: 162 VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTI 221
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV------------------- 161
L+ A G + +A ++ EM +G+ + +TY ++++G+
Sbjct: 222 LIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNG 281
Query: 162 ------------------GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
GK E GE L+ +ML K P T+ +I +C+ G I+E
Sbjct: 282 CVAGVSTYNILLRDLLNEGKWEYGEK--LMSDMLVKGCEPNPITYSTLITALCRDGKIDE 339
Query: 204 ALELMKKIVAKSFAPGARAWEALL 227
A ++K + K+ AP +++ L+
Sbjct: 340 AKNVLKVMKEKALAPDGYSYDPLI 363
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%), Gaps = 3/222 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ +I L ++ + +A +L MK+ + PD Y ++S + EG E
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEF 378
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
D+M+ G +PD+ +YN + LCK DEA+ I + + ++GC PN + NTL GAL
Sbjct: 379 LDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWS 438
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML--KKCFYPRS 185
+GD +A G++ EM G++ + TY ++ L + +A LL +M +KC P
Sbjct: 439 SGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKC-QPTV 497
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ ++ +C+ I +A+E++ +V + P + L+
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLI 539
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + ++ L K +AL I ++ + G P+ Y + + + GD ++
Sbjct: 386 GHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRA 445
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-IVDSMIKLGCKPNVVTCNTLLG 123
+ EML G+ PD TYN I+ LC+ VD+AI+ +VD C+P V++ NT+L
Sbjct: 446 LGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLL 505
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
LC+ + A V+ M +G N TY +++ G+
Sbjct: 506 GLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+N CK K DE++ + M+ G KP+V+ C L+ + KA VM+ + G
Sbjct: 84 LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG- 142
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ ++ Y ++ G + AS +L+ M K+ F P T++ +I C +G ++ AL
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202
Query: 207 LMKKIVAKSFAPGARAW----EALLLHSGSD 233
+M +++ + P + EA + G D
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGID 233
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 120/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K + +A + ++M GI PDVV Y+ ++SG G +L
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M++ + PDVYT+N+ +N CK K+ E + D M+K G KPN VT N+L+ C
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK + M GV ++ +Y IM++G + EA L +EM +K P T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I + + G I+ AL+L+ ++ + P + ++L
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSIL 442
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 122/230 (53%), Gaps = 4/230 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P + + ++ LVKE A I N M Q G+ PD+ Y+I+++G
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVN--KAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ + LF EM +IPDV TY+ I+GL K ++ A+Q+VD M G PN+ T
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTY 438
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N++L ALC+ + KA ++ + KG + ++ TY I++ GL ++ +A + E++L
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLV 498
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
K + + +I C +GL NEAL L+ K+ P A+ +E ++L
Sbjct: 499 KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 115/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ K+ + + + + M + GIKP+ V Y ++ G + K +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ PD+ +Y++ ING CK K DEA+ + M + P+VVT ++L+ L +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ +M +GV N+ TY +LD L ++ +A LL + K F P ST
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +CQ G + +A ++ + ++ K + A+ ++
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMI 512
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 119/214 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + ++ MI K ++ +A+ + +M + I PDVV Y+ ++ G+ G
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L D+M G+ P++ TYN ++ LCK ++VD+AI ++ G +P++ T +
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC++G L A+ V +++ +KG L+++ Y IM+ G + EA LL +M
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++A+
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 115/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ +I + DA+ + N+M + IKPDV + I+++ +G +
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+FD M+ G+ P+ TYN ++G C +V++A I ++M + G P++ + + ++
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ +A + KEM K + ++ TY ++DGL I A L+++M + P
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+++I+ +C+ +++A+ L+ K K F P + L+
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +F ++ LVK + LY+ +M+ GIKP++V I+++ G +
Sbjct: 83 PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L +G +PD T+ GLC + ++ +A D ++ LG + ++ TL+ LC+
Sbjct: 143 FAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + V+ N+ Y ++D + + EA L EM+ K P T
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C G + +A++L K++ ++ P + L+
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N++ + P + +L +V Y + L +M G+ P++ N+ I
Sbjct: 68 DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+ + A + ++K+G P+ +T TL LC G + +A ++ G
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ +Y ++ GL E A LL+ + P ++ II MC+ L+NEA +L
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 208 MKKIVAKSFAPGARAWEALL 227
++V+K +P + AL+
Sbjct: 248 FSEMVSKGISPDVVTYSALI 267
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + + ++ L K + A+ +L + K G +PD+ Y+I++ G+ G
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+++LV G DVY Y + I G C + +EA+ ++ M GC P+ T
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
++ +L + + A+ +++EM +G+ LN +
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGLPLNFY 576
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 97/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G PD + +T + G+ +G + D+++ LG D +Y I+
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIH 198
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+ ++ + +PNVV NT++ ++C+ +++A + EM KG+
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISP 258
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G ++ +A L +M+ + P TF+ ++ C+ G + E +
Sbjct: 259 DVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 319 DMMMKQGIKPNFVTYNSLM 337
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 126/226 (55%), Gaps = 4/226 (1%)
Query: 5 GFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G PGV+ + ++ FLVK+ A I N M Q G+ PD+ Y+I+++G
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVN--KAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ EL EM +IP+V TY+ I+GLCK K+ A+++VD M G PN+VT +++L
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
ALC+ + A ++ +M +G++ N++TY I++ GL ++ +A + E++L K
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHN 384
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
T+ +I C KGL +EAL L+ K+ P A+ +E ++L
Sbjct: 385 LNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIIL 430
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P + ++ +I K + +A+ +L +M I P+VV Y+ ++ G+ G
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK 297
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G P++ TY+ ++ LCK ++VD AI ++ M G +PN+ T
Sbjct: 298 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC++G L A+ V +++ +KG LN++TY +M+ G K EA LL +M
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P + T++ II + +K A +L+ +++ +F
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNF 453
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++F ++ LVK + LY+ +M+ GIKP++V I+++ G +
Sbjct: 60 PPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSV 119
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDE----------AIQIVDSMIKLGCKPNVVT 117
++L +G P+ T N I GLC K+ + A+ + + MI P+V T
Sbjct: 120 LTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYT 179
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ C+ G + +AK V+ M ++G++ + TY ++DG ++ +A + M
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P ++ +I C+ +++EA+EL+K++ K P + +L+
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLI 289
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P V+ ++ +I L K + AL ++++M G P++V Y+ +L +
Sbjct: 273 MHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ 332
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L +M G+ P++YTY + I GLC+ K+++A ++ + ++ G NV T
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ G +A ++ +M G N TY I++ L K E A LL EM++
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452
Query: 181 FYPRSSTFDNIICCMCQKG 199
F R + +++I + G
Sbjct: 453 FDGRVALTNDLIASIWVTG 471
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N++ Q P + + +L +V Y + L +M G+ P++ N+ I
Sbjct: 45 DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE----------AGDLSKAKGV 137
N C+ + A ++ ++K+G KPN +T NTL+ LC G L A +
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
+M L+ + +++T+ I++DG + + EA +L M+ + P T+++++
Sbjct: 165 FNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFL 224
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALL 227
+N+A + + +P +++ L+
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILI 254
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
IP T + N N VD+A+ + + +++ P + N +LG+L ++
Sbjct: 25 FNFIPYFSTSTTFHN----NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHT 80
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ ++M +G++ NL I+++ I A +L ++LK + P + T + +I
Sbjct: 81 VLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIK 140
Query: 194 CMCQKGLIN----------EALELMKKIVAKSFAPGARAWEALL 227
+C G I+ +A++L K++ ++ P + L+
Sbjct: 141 GLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 35/165 (21%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG- 59
M G P ++ ++ ++ L K + +A+ +L QMK GI+P++ YTI++ G+ G
Sbjct: 308 MHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGK 367
Query: 60 --DYVKLDE-------------------------LFDEMLVL-------GLIPDVYTYNV 85
D K+ E LFDE L L G IP+ TY +
Sbjct: 368 LEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEI 427
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
I L K+++ + A +++ MI+ V N L+ ++ G
Sbjct: 428 IILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGS 472
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 118/220 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +IR + DA+ + N+M + IKPDV + I++ G EG K +
Sbjct: 256 PDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNV 315
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
D M++ + P+V T+N ++G CK K+ E + M+K G KPNVVT +L+ C
Sbjct: 316 LDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 375
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M +GV N+H+Y IM++G ++ +A L EM K P T
Sbjct: 376 VKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVT 435
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ A +L+ ++ + P + ++L
Sbjct: 436 YNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL 475
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
+F ++ LVK + L + QM+ +GI P+ V + I+++ G + +
Sbjct: 84 FEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAK 143
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
+L +G PD+ T N +I G C + ++ +A+ D ++ LG + V+ TL+ LC+ G+
Sbjct: 144 ILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 203
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
A +++ + K V+LN Y ++DG+ + +A L EM+ K P T+
Sbjct: 204 TRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRISPDVVTYSA 263
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I G + +A++L K++ ++ P + L+
Sbjct: 264 LIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ K+ + + + M + GIKP+VV Y ++ G K ++
Sbjct: 326 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 385
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ +V++YN+ ING CK KVD+A+++ M P+VVT N+L+ LC+
Sbjct: 386 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCK 445
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM +G N+ TY +L+ L+ K + + P T
Sbjct: 446 SGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLK------------DQGIQPNMHT 493
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+I +CQ G + A ++ + ++ K
Sbjct: 494 DTILIKGLCQSGKLEAARKVFEDLLVK 520
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + ++ ++ A I N M Q G+ +V Y I+++G
Sbjct: 354 MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKK 413
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +LF EM +IPDV TYN I+GLCK K+ A Q+V+ M G PN++T N+
Sbjct: 414 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNS 473
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L AL L+K K +G++ N+HT I++ GL ++ A + E++L K
Sbjct: 474 ILNAL-----LTKLKD-------QGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 520
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L ++ ++ + V Y V+ G+ +
Sbjct: 182 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVND 241
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+L+ EM+ + PDV TY+ I G K+ +AI + + MI KP+V T N L+
Sbjct: 242 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 301
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ G L KAK V+ M ++ ++ N+ T+ ++DG ++ E + M+K+ P
Sbjct: 302 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 361
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +++ C +N+A ++ + + ++ ++
Sbjct: 362 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMI 405
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 93/200 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N + + +L +V Y + L +M G+ P+ T+N+ I
Sbjct: 66 DAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI 125
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C+ + A ++ ++K+G +P+++T NT + C G + +A ++ G
Sbjct: 126 NCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 185
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L+ +Y +++GL E A LL + K + ++ +I M + +N+A +L
Sbjct: 186 LDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDL 245
Query: 208 MKKIVAKSFAPGARAWEALL 227
++VAK +P + AL+
Sbjct: 246 YSEMVAKRISPDVVTYSALI 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%)
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I+ N VD+A+ + +S++ N +LG+L ++ + ++M +G+
Sbjct: 55 ISTTFHSNDVDDAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 114
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
N T+ I+++ I A +L ++LK + P T + I C KG I++AL
Sbjct: 115 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 174
Query: 207 LMKKIVAKSFAPGARAWEALL 227
K+VA F ++ L+
Sbjct: 175 FHDKLVALGFHLDQVSYGTLI 195
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 127/220 (57%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I L K++ DA + ++M + I P+VV Y+ ++ G G L
Sbjct: 200 PDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRL 259
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM++ + PDVYT+N+ I+GLCK ++ +A ++ MIK G K NVVT ++L+ +
Sbjct: 260 FNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYFQ 319
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK V + M GV N+H+Y IM+DGL + EA L ++M + P + T
Sbjct: 320 VNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVT 379
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ L+L+ ++ + A + +L+
Sbjct: 380 YNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLM 419
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L K R L ++++M G +V+ YT ++ + +
Sbjct: 368 MHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHN 427
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K LF +M LG+ P+VYTYN+ I+ LCK ++ +A ++D M G NVVT +
Sbjct: 428 LDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTS 487
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ +L KA ++ G++ ++HTY +++DGL + A + +L K
Sbjct: 488 LIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKG 547
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ T+ +I +C++GL +E L L+ K+ AP A +E ++
Sbjct: 548 YHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEIII 594
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 113/212 (53%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L K AL +L ++ +KPDVV YT ++ + + EL+ EM+
Sbjct: 173 LINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKK 232
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+V TY+ I G C ++ +A+++ + M+ P+V T N L+ LC+ G++ KA+
Sbjct: 233 IFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKAR 292
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ M GV+LN+ TY ++DG E+ +A + E M++ P +++ +I +
Sbjct: 293 NLLGLMIKSGVKLNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGL 352
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C +++EA+ L KK+ ++ P + +L+
Sbjct: 353 CNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLI 384
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V+ +T ++ L K A+ + +MK G++P+V Y I++ + G
Sbjct: 407 GQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADA 466
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L DEM G +V TY I+GLCK + +D+AI+ + G + +V T L+
Sbjct: 467 WYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDG 526
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A V + + +KG L++ TY +M+ GL + E LL +M + P
Sbjct: 527 LCKGGRLKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPD 586
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T++ IIC + KG I+ A +L+ +++A+
Sbjct: 587 AITYEIIICALFGKGKIDMAEKLLCEMIAR 616
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I L K A +L M + G+K +VV Y+ ++ G + K ++
Sbjct: 270 PDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDGYFQVNEVNKAKDV 329
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ G+ P++++YN+ I+GLC VDEA+ + M PN VT N+L+ LC+
Sbjct: 330 FEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCK 389
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S ++ EM +G N+ TY ++D L + +A L +M P T
Sbjct: 390 SGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYT 449
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G I +A L+ ++ + + +L+
Sbjct: 450 YNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLI 489
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ N++ P + + +LS +V + +M + G+ P++ T + I
Sbjct: 45 DAVSSFNRILNINPTPPIFEFGKILSSLVKLNHFHTAISFSQQMELKGIQPNIVTLTILI 104
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C N+++ A I+ ++KLG +PN VT TL+ LC G++ KA ++ K +
Sbjct: 105 NSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQ 164
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
LN +Y I+++GL E A LL + P + II +C+ L+ +A EL
Sbjct: 165 LNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYEL 224
Query: 208 MKKIVAKSFAPGARAWEALL 227
++V K P + L+
Sbjct: 225 YSEMVEKKIFPNVVTYSTLI 244
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG P V + +I L K R DA Y++++M G +VV YT ++ G+ +
Sbjct: 438 MKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHN 497
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E F ++ G+ DV+TY V I+GLCK ++ A+++ ++ G +V+T
Sbjct: 498 LDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTV 557
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC+ G + ++ +M G + TY I++ L GK +I A LL EM+ +
Sbjct: 558 MISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEIIICALFGKGKIDMAEKLLCEMIAR 616
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + T +I L A + + + + + Y I+++G+ G+
Sbjct: 125 KLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGETK 184
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
L + L + PDV Y I+ LCK V +A ++ M++ PNVVT +TL+
Sbjct: 185 AALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLI 244
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G L A + EM LK ++ +++T+ I++DGL E+ +A LL M+K
Sbjct: 245 YGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVK 304
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +++ Q +N+A ++ + +V +P ++ ++
Sbjct: 305 LNVVTYSSLMDGYFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMI 349
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +F ++ LVK A+ QM+ GI+P++V TI+++ +
Sbjct: 60 PPIFEFGKILSSLVKLNHFHTAISFSQQMELKGIQPNIVTLTILINSFCHLNQLNFAFSI 119
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++L LG P+ T INGLC +V +A D +I + N + L+ LC+
Sbjct: 120 LGKILKLGYEPNTVTLTTLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCK 179
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G+ A +++ + V+ ++ Y ++D L + +A L EM++K +P T
Sbjct: 180 SGETKAALSLLRMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVT 239
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C G + +A+ L +++ K+ P + L+
Sbjct: 240 YSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPDVYTFNILI 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ T +I + A IL ++ + G +P+ V T +++G+ G+ K
Sbjct: 92 GIQPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKA 151
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+D+++ + ++Y + INGLCK + A+ ++ + L KP+VV T++ +
Sbjct: 152 FHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDS 211
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ ++ A + EM K + N+ TY ++ G ++ +A L EM+ K P
Sbjct: 212 LCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKNIDPD 271
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+ +I +C+ G + +A L+ ++ + +L+
Sbjct: 272 VYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLM 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ +T +I L K A+ ++ GI+ DV YT+++ G+ G
Sbjct: 473 MHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGR 532
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F +L+ G DV TY V I+GLCK+ DE + ++ M + GC P+ +T
Sbjct: 533 LKNALEVFRILLIKGYHLDVLTYTVMISGLCKEGLFDEVLTLLSKMEENGCAPDAITYEI 592
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL G + A+ ++ EM +G+
Sbjct: 593 IICALFGKGKIDMAEKLLCEMIARGL 618
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 6/230 (2%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ +T ++ FLVKE A YI N + Q G+ P++ Y ++++G+
Sbjct: 158 MIKQGVEPNVVTYTSLMDGYFLVKEVN--KATYIFNTIAQRGVTPELHSYNVMINGLCKN 215
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP-NVVT 117
+ LF +M + PD +YN I+GLCK + + ++D M C+P NV+T
Sbjct: 216 KMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHN-RCQPVNVIT 274
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N+LL ALC+ + KA ++K+M +G++ N++TY I++DGL + +A + ++L
Sbjct: 275 YNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLL 334
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + S ++ ++ C++GL +EAL L+ K+ P A ++ L+
Sbjct: 335 TKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLI 384
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + MI L K + +A + M + PD + Y ++ G+ G +
Sbjct: 197 GVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDV 256
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM +V TYN ++ LCK ++VD+AI ++ M G +PN+ T L+
Sbjct: 257 WDLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDG 316
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L+ A+ + ++ KG LN+ Y +M++ + EA LL +M P
Sbjct: 317 LCKNGRLADAREIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPD 376
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T+ +IC + + ++A++L+++++ +
Sbjct: 377 AITYQTLICALFENNKNDKAVKLLREMIVR 406
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ + ++ L K + A+ +L +MK GI+P++ YTI++ G+ G E++
Sbjct: 271 NVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIY 330
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
++L G +V YNV +N CK+ DEA+ ++ M GC P+ +T TL+ AL E
Sbjct: 331 HDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFEN 390
Query: 129 GDLSKAKGVMKEMGLKGV 146
KA +++EM ++G+
Sbjct: 391 NKNDKAVKLLREMIVRGL 408
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + F ++ LVK + + ++ GI+ D+V I+++ G
Sbjct: 34 MLNIKLTPPIFKFGKILGSLVKINHFHTVISLSRLIELRGIQTDIVNLNILVNCFCQLGQ 93
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI---------QIVDS------ 105
+ ++L +G PD T I GLC+ +++ + I+DS
Sbjct: 94 LNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQIEGLLVKPNVVMYSTIIDSLCKDKL 153
Query: 106 ----MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
MIK G +PNVVT +L+ +++KA + + +GV LH+Y +M++GL
Sbjct: 154 SGAVMIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMINGLC 213
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+ EA+ L ++M + P + +++++I +C+ G I++ +L+ ++ +
Sbjct: 214 KNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVI 273
Query: 222 AWEALL 227
+ +LL
Sbjct: 274 TYNSLL 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
N M + P + + +L +V + + L + + G+ D+ N+ +N C+
Sbjct: 31 FNHMLNIKLTPPIFKFGKILGSLVKINHFHTVISLSRLIELRGIQTDIVNLNILVNCFCQ 90
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD----LSKAKGVMKE-------- 140
+++ A ++ ++K+G +P+ VT TL+ LC +G L K VM
Sbjct: 91 LGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQIEGLLVKPNVVMYSTIIDSLCK 150
Query: 141 -------MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
M +GVE N+ TY ++DG E+ +A+ + + ++ P +++ +I
Sbjct: 151 DKLSGAVMIKQGVEPNVVTYTSLMDGYFLVKEVNKATYIFNTIAQRGVTPELHSYNVMIN 210
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ ++NEA L K + +++ P ++ +L+
Sbjct: 211 GLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLI 244
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L K D ++++M +V+ Y +L +
Sbjct: 228 MHSRNMTPDTISYNSLIDGLCKSGSISDVWDLIDEMHNRCQPVNVITYNSLLDALCKNHQ 287
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L +M G+ P++YTY + ++GLCK ++ +A +I ++ G NV N
Sbjct: 288 VDKAIALLKKMKDQGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNV 347
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ C+ G +A ++ +M G + TY+ ++ L + +A LL EM+ +
Sbjct: 348 MVNEFCKEGLFDEALSLLSKMEDNGCTPDAITYQTLICALFENNKNDKAVKLLREMIVR 406
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 123/215 (57%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I + K++ DA + ++M I P+VV Y+ ++SG G +LF++M+
Sbjct: 157 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 216
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ + P+VYT+++ ++G CK+ +V EA ++ M+K G KP+VVT ++L+ C +++
Sbjct: 217 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 276
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
KA+ + M +GV N+ +Y IM++G + EA L +EM K +P T+ +I
Sbjct: 277 KAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALI 336
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ G I+ ALEL+ ++ + P + ++L
Sbjct: 337 DGLCKSGRISYALELVDEMHDRGQQPDIITYNSIL 371
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ ++ ++ LV E ++++ N M G+ +V Y+I+++G
Sbjct: 250 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIF--NTMSHRGVTANVQSYSIMINGFCKI 307
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ +LF EM + PDV TY+ I+GLCK ++ A+++VD M G +P+++T
Sbjct: 308 KMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N++L ALC+ + KA ++ ++ +G+ +++TY I++ GL ++ +A + E++L
Sbjct: 368 NSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLV 427
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
K + + +I C KGL +EAL L+ K+ P A+ +E ++L
Sbjct: 428 KGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIIL 477
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V ++ MI K + +A+ + +M I PDV+ Y+ ++ G+ G
Sbjct: 285 MSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGR 344
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G PD+ TYN ++ LCK++ VD+AI ++ + G +P++ T
Sbjct: 345 ISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTI 404
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +G L A+ V +++ +KG L+++ Y +M+ G K EA LL +M +
Sbjct: 405 LVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 464
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++ +
Sbjct: 465 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 498
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + DA+ + N+M + I P+V ++I++ G EG + +
Sbjct: 187 PNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNV 246
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ PDV TY+ ++G C N+V++A I ++M G NV + + ++ C+
Sbjct: 247 LAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCK 306
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + KEM K + ++ TY ++DGL I A L++EM + P T
Sbjct: 307 IKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIIT 366
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I+ +C+K +++A+ L+ K+ + P + L+
Sbjct: 367 YNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILV 406
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++F ++ LVK + + + + +M+ +GIK D+V +I+++ G +
Sbjct: 12 PPDIEFGKILGSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSILINSFCQLGHIPFAFSV 71
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++L G PD T+ I GLC + + +A+ D +I +G + V+ TL+ LC+
Sbjct: 72 LAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCK 131
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + K V+L+ Y ++D + + +A L EM K P T
Sbjct: 132 VGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVT 191
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C G + +A++L K++ ++ P + L+
Sbjct: 192 YSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILV 231
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K+ A+ +L ++K GI+PD+ YTI++ G+ G
Sbjct: 355 MHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGK 414
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+++LV G DVY Y V I G C + DEA+ ++ M + GC P+ T
Sbjct: 415 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 474
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM ++G+
Sbjct: 475 IILSLFEKDENDMAEKLLREMIMRGL 500
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ N + P + + +L +V Y + L +M G+ D+ ++ IN C
Sbjct: 1 MFNHLLHKNSTPPDIEFGKILGSLVKSKHYHNVVSLSQKMEFEGIKLDLVNCSILINSFC 60
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ + A ++ ++K G +P+ +T TL+ LC GD+ +A ++ G L+
Sbjct: 61 QLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQV 120
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+Y +++GL E A LL + K + + +II MC+ +N+A +L ++
Sbjct: 121 SYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDSMCKDKHVNDAFDLYSEM 180
Query: 212 VAKSFAPGARAWEALL 227
AK +P + AL+
Sbjct: 181 AAKRISPNVVTYSALI 196
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 125/229 (54%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K GF P V+ ++ ++ LVKE A I N M Q G+ PD+ Y I+++G
Sbjct: 152 MMKKGFKPNVVTYSSLMDGYCLVKEVN--KAKSIFNNMAQGGVNPDIQSYNILINGFCKI 209
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
LF+EM +IP+V TYN I+GLCK K+ A+++VD M G P+++T
Sbjct: 210 KMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITY 269
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++LL ALC+ + KA ++ ++ +G++ N++TY I+++GL +A + E++L
Sbjct: 270 SSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLV 329
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + +T+ +I C G+ EAL ++ K+ P A +E ++
Sbjct: 330 KGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIII 378
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 128/237 (54%), Gaps = 13/237 (5%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY- 61
K G+ P + T +I+ L + + AL+ +++ G + + V Y +++G+ G
Sbjct: 38 KKGYDPDAITLTSLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTR 97
Query: 62 --VKLDELFDEMLV---LGLIPDVYTYNVYINGLC-----KQNKVDEAIQIVDSMIKLGC 111
++L D LV +G+ P+V TY+ I+G C K+ KV EA + +M+K G
Sbjct: 98 AALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGF 157
Query: 112 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 171
KPNVVT ++L+ C +++KAK + M GV ++ +Y I+++G K ++ +A++
Sbjct: 158 KPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFC-KIKMTDAAM 216
Query: 172 -LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L EEM + P T++++I +C+ G I+ AL+L+ ++ + P + +LL
Sbjct: 217 NLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLL 273
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 109/214 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + +I K + A+ + +M I P+VV Y ++ G+ G
Sbjct: 187 MAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK 246
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G PD+ TY+ ++ LCK + VD+AI ++ + G +PN+ T
Sbjct: 247 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTI 306
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G A+ + +++ +KG +N++TY +M+ GEA +L +M +
Sbjct: 307 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 366
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + K ++A +L+ +++ +
Sbjct: 367 CIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITR 400
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 11/235 (4%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD------GIKPDVVCYTIVLSG--I 55
LGF + + +I L K + AL +L ++ GI P+VV Y+ ++SG I
Sbjct: 74 LGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCI 133
Query: 56 VA---EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 112
+A EG + +F M+ G P+V TY+ ++G C +V++A I ++M + G
Sbjct: 134 LAFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVN 193
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P++ + N L+ C+ A + +EM + + N+ TY ++DGL +I A L
Sbjct: 194 PDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKL 253
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++EM + P T+ +++ +C+ +++A+ L+ K+ + P + L+
Sbjct: 254 VDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILI 308
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K A+ +L ++K G++P++ YTI+++G+ G
Sbjct: 257 MHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGR 316
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G +V TY V I+ C EA+ ++ M + GC PN VT
Sbjct: 317 PEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEI 376
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + KA+ ++ EM +G+
Sbjct: 377 IIRSLFDKDENDKAEKLLLEMITRGL 402
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M+ +G ++V +I+++ G + ++ G PD T I GLC + +
Sbjct: 1 MELNGFVSNLVTLSILINSFSQLGQNPLSFSVLAKIFKKGYDPDAITLTSLIKGLCLKGQ 60
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK------GVELN 149
+ +A+ D + LG + N V+ TL+ LC+ G A +++ + K G+
Sbjct: 61 IHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPE 120
Query: 150 LHTYRIMLDG-----LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ TY ++ G + ++ EA + M+KK F P T+ +++ C +N+A
Sbjct: 121 VVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKA 180
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
+ + P +++ L+
Sbjct: 181 KSIFNNMAQGGVNPDIQSYNILI 203
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 123/215 (57%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I + K++ DA + ++M I P+VV Y+ ++SG G +LF++M+
Sbjct: 45 YSSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMI 104
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ + P+VYT+++ ++G CK+ +V EA ++ M+K G KP+VVT ++L+ C +++
Sbjct: 105 LENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVN 164
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
KA+ + M +GV N+ +Y IM++G + EA L +EM K +P T+ +I
Sbjct: 165 KAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALI 224
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ G I+ ALEL+ ++ + P + ++L
Sbjct: 225 DGLCKSGRISYALELVDEMHDRGQQPDIITYNSIL 259
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 1 MRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ ++ ++ LV E ++++ N M G+ +V Y+I+++G
Sbjct: 138 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIF--NTMSHRGVTANVQSYSIMINGFCKI 195
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ +LF EM + PDV TY+ I+GLCK ++ A+++VD M G +P+++T
Sbjct: 196 KMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITY 255
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N++L ALC+ + KA ++ ++ +G+ +++TY I++ GL ++ +A + E++L
Sbjct: 256 NSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLV 315
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
K + + +I C KGL +EAL L+ K+ P A+ +E ++L
Sbjct: 316 KGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIIL 365
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V ++ MI K + +A+ + +M I PDV+ Y+ ++ G+ G
Sbjct: 173 MSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGR 232
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G PD+ TYN ++ LCK++ VD+AI ++ + G +P++ T
Sbjct: 233 ISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTI 292
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +G L A+ V +++ +KG L+++ Y +M+ G K EA LL +M +
Sbjct: 293 LVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 352
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++ +
Sbjct: 353 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 386
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + DA+ + N+M + I P+V ++I++ G EG + +
Sbjct: 75 PNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNV 134
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ PDV TY+ ++G C N+V++A I ++M G NV + + ++ C+
Sbjct: 135 LAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCK 194
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + KEM K + ++ TY ++DGL I A L++EM + P T
Sbjct: 195 IKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIIT 254
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I+ +C+K +++A+ L+ K+ + P + L+
Sbjct: 255 YNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILV 294
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K+ A+ +L ++K GI+PD+ YTI++ G+ G
Sbjct: 243 MHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGK 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+++LV G DVY Y V I G C + DEA+ ++ M + GC P+ T
Sbjct: 303 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 362
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM ++G+
Sbjct: 363 IILSLFEKDENDMAEKLLREMIMRGL 388
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 128/229 (55%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P + + ++ FLVKE A Y+ N + + G+ P V Y+++++G+ +
Sbjct: 189 MIKQGVDPDIFTYISLMDGYFLVKEVN--KATYVFNTIARSGVIPSVQSYSVMINGLCKK 246
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF E+ + + PD TYN I+GLCK ++ + ++D M +G +V+T
Sbjct: 247 KMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQPADVITY 306
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N+LL ALC+ + KA ++ ++ +G++ N++TY I++DGL + +A ++ + +L
Sbjct: 307 NSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDAQVVYQNLLI 366
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K ++ + ++ +C++GL ++AL L+ K+ S P A +E L+
Sbjct: 367 KGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYETLI 415
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 115/210 (54%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V ++ MI L K++ +A+ + +++ + PD + Y ++ G+ G +
Sbjct: 228 GVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDV 287
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM +G DV TYN ++ LCK ++VD+AI ++ + G +PN+ T L+
Sbjct: 288 WDLIDEMHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDG 347
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A+ V + + +KG L++ Y +M++GL + +A L+ +M P
Sbjct: 348 LCKNGRLKDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPN 407
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T++ +I + + G ++ ++L+++++ +
Sbjct: 408 AVTYETLIRALFENGKNDKTVKLLREMIVR 437
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 107/192 (55%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L K + +DA + ++M I PDVV YT ++ G G + + L ++ML+ + D
Sbjct: 103 LCKNKLIIDASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLD 162
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
V T+N ++GLCK+ +V +A ++ MIK G P++ T +L+ +++KA V
Sbjct: 163 VQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFN 222
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+ GV ++ +Y +M++GL K + EA L +E+ K P + T++++I +C+ G
Sbjct: 223 TIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSG 282
Query: 200 LINEALELMKKI 211
I++ +L+ ++
Sbjct: 283 RISDVWDLIDEM 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 23/243 (9%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLGF P + T +++ + + AL+ + + G K + V + + S DYV
Sbjct: 38 KLGFEPDTITLTTVMKGMCLTGQVRKALHFHDHVIAKGFKLNHVTFMGLWST-----DYV 92
Query: 63 KLDE------------------LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 104
L++ L EM+V + PDV TY I+G C + EA+ +++
Sbjct: 93 NLEKQELPCSLCKNKLIIDASALCSEMIVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLN 152
Query: 105 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
M+ +V T NTL+ LC+ G++ +A+ V+ M +GV+ ++ TY ++DG
Sbjct: 153 QMLLKNISLDVQTFNTLVDGLCKEGEVKQARNVLAVMIKQGVDPDIFTYISLMDGYFLVK 212
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
E+ +A+ + + + P ++ +I +C+K +++EA+ L K++ K+ AP +
Sbjct: 213 EVNKATYVFNTIARSGVIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYN 272
Query: 225 ALL 227
+L+
Sbjct: 273 SLI 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 79/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G V+ + ++ L K + A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 294 MHNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGR 353
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +L+ G DV Y+V +NGLCK+ D+A+ +V M C PN VT T
Sbjct: 354 LKDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYET 413
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ AL E G K +++EM ++G+
Sbjct: 414 LIRALFENGKNDKTVKLLREMIVRGI 439
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ DV ++ IN C ++ A ++ ++KLG +P+ +T T++ +C G + KA
Sbjct: 5 GIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQVRKA 64
Query: 135 KGVMKEMGLKGVELNLHTYRIMLD-------------GLVGKAEIGEASLLLEEMLKKCF 181
+ KG +LN T+ + L I +AS L EM+ K
Sbjct: 65 LHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNKLIIDASALCSEMIVKRI 124
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T+ +I C G EA+ L+ +++ K+ + + + L+
Sbjct: 125 FPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLV 170
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 114/196 (58%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I N M Q G+ PD+ YTI+++G+ + LF+EM + DV TY+ INGLC
Sbjct: 325 IFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLC 384
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K ++ A ++ D M+ G P+V+T N+LL ALC++ KA ++ +M +G++ ++
Sbjct: 385 KSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIF 444
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY I++DGL + +A + ++L K + T++ +I +C++ L++EAL L+ K+
Sbjct: 445 TYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKM 504
Query: 212 VAKSFAPGARAWEALL 227
AK P A +E ++
Sbjct: 505 EAKGCIPDAITYEIII 520
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 124/214 (57%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +T MI L K + +A+ + +M + DV+ Y+ +++G+ G
Sbjct: 329 MMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGR 388
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +LFDEML G PDV TYN ++ LCK ++ D+AI ++ M G + ++ T N
Sbjct: 389 LISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNI 448
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +K +++ TY +M++GL ++ + EA LL +M K
Sbjct: 449 LIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKG 508
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + KG+ ++A +L+++++A+
Sbjct: 509 CIPDAITYEIIIRALFGKGVNDKAEKLLREMIAR 542
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 123/226 (54%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
R+L F P V+ ++ +I L K++ DA + ++M + I PDV YT ++ G G
Sbjct: 190 RQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQL 249
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
++ L +EM++ + PDVYT+N ++ L K+ KV EA ++ M+K G +PN+VT + L
Sbjct: 250 KEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVL 309
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C +++KAK + M +G+ ++ +Y IM++GL + EA L EEM
Sbjct: 310 MDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNM 369
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++I +C+ G + A +L +++ + P + +LL
Sbjct: 370 TLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLL 415
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 106/204 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T +I + + +LN+M I PDV + ++ + EG + L
Sbjct: 231 PDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCL 290
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ P++ TY+V ++G C N+V++A I +SM++ G P++ + ++ LC+
Sbjct: 291 IAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCK 350
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L +A + +EM + L++ TY +++GL + A L +EML + P T
Sbjct: 351 MKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVIT 410
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
+++++ +C+ ++A+ L+ K+
Sbjct: 411 YNSLLDALCKSHQTDKAIALLSKM 434
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 82/142 (57%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + ++ L K + A+ +L++MK GI+ D+ Y I++ G+ +G
Sbjct: 403 GQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDA 462
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F ++L+ DV TYNV INGLCK++ +DEA+ ++ M GC P+ +T ++ A
Sbjct: 463 QKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAKGCIPDAITYEIIIRA 522
Query: 125 LCEAGDLSKAKGVMKEMGLKGV 146
L G KA+ +++EM +G+
Sbjct: 523 LFGKGVNDKAEKLLREMIARGL 544
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M ++ P +++F ++ LVK ++ + + QM+ I P +V +I+++
Sbjct: 46 MLRMRPTPPIIEFNQILTSLVKIDKNNFSTVISLFRQMEFQRIHPSIVTLSILINCYSHL 105
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
LF ++L +G PDV +N I GLC N V EA+ D ++ G + + V+
Sbjct: 106 RQMKFAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSY 165
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
TL+ LC+ G A +++ + + + ++ Y I++D L + +A L EM+
Sbjct: 166 GTLINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMI 225
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+K P T+ ++I C G + E L+ ++V K+ P + L+
Sbjct: 226 RKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNINPDVYTFNTLV 275
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 129/229 (56%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V + ++ FLVKE A + N M Q G+ DV Y++++SG+
Sbjct: 246 MMKEGVGPDVFTYNALMDGYFLVKE--AGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKM 303
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ +LF+ M +IPDV Y+ I+GLCK +++ A++ VD M G PNV+T
Sbjct: 304 KMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITY 363
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+L+ ALC++ + KA ++K++ +G++ N++TY I++DGL + +A + +++L
Sbjct: 364 TSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLM 423
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K T+ +I +C++ L +EAL L+ K+ K P A A+E ++
Sbjct: 424 KGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETII 472
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 120/216 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G V ++ MI L K + +A+ + M+ + + PDVV Y+ ++ G+ G
Sbjct: 281 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 340
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ DEM G P+V TY I+ LCK ++VD+AI ++ + G + N+ T N
Sbjct: 341 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 400
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L+ A+ V +++ +KG +++ TY IM++GL ++ EA LL +M K
Sbjct: 401 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 460
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P + ++ II +K + ++A +L+++++A+
Sbjct: 461 CVPDAIAYETIINAFFEKDMNDKAEKLLREMIARRL 496
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L K++ DA + +M + + P+VV YT ++ G G K L
Sbjct: 148 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 207
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EM++ + P+V T+N ++GLCK+ K+ EA +V M+K G P+V T N L+
Sbjct: 208 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 267
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ KAK V M GV ++H+Y +M+ GL + EA L E M + P
Sbjct: 268 VKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVA 327
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G IN AL+ + ++ + P + +L+
Sbjct: 328 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 367
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P ++ +T +IR L + ++L +++ GIK D V Y +++G+ G
Sbjct: 73 KLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTG 132
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
L ++ PDV YN I+GLCK V +A + M + PNVVT +L+
Sbjct: 133 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 192
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G L KA G++ EM LK V N+ T+ ++DGL + ++ EA L+ M+K+
Sbjct: 193 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 252
Query: 183 PRSSTFDNII 192
P T++ ++
Sbjct: 253 PDVFTYNALM 262
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 104/199 (52%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L +++ + +PDVV Y ++ G+ + +L+ EM + P+V TY I
Sbjct: 134 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIY 193
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C ++D+A +++ M+ PNV T NTL+ LC+ G + +AK ++ M +GV
Sbjct: 194 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 253
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++DG E G+A + M + ++ +I + + +++EA++L
Sbjct: 254 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLF 313
Query: 209 KKIVAKSFAPGARAWEALL 227
+ + ++ P A+ +L+
Sbjct: 314 EGMRNENVIPDVVAYSSLI 332
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G +PD++ YT ++ G+ G + D ++ G+ D +Y IN
Sbjct: 64 AFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLIN 123
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A++++ + C+P+VV NT++ LC+ + A + EM K V
Sbjct: 124 GLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFP 183
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY ++ G ++ +A LL EM+ K P TF+ ++ +C++G + EA L+
Sbjct: 184 NVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLV 243
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + P + AL+
Sbjct: 244 AVMMKEGVGPDVFTYNALM 262
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 108/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F ++ LVK + +++ +M+ GI+ + + I+++ +
Sbjct: 8 PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 67
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L LG PD+ TY I GLC +V E++ D ++ G K + V+ TL+ LC+
Sbjct: 68 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 127
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G A +++++ + ++ Y ++DGL + +A L EM +K +P T
Sbjct: 128 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 187
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I C G +++A L+ ++V K+ P + L+
Sbjct: 188 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLV 227
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 121/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + ++ ++ +A I + M G+ +V Y I+++G
Sbjct: 138 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 197
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF+EM LIPDV TYN INGLCK K+ A+++VD M G P+++T ++
Sbjct: 198 TDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 257
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL ALC+ + KA ++ + +G+ N++TY I++DGL + +A + E++L K
Sbjct: 258 LLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 317
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +T+ +I C KGL +EAL L+ K+ S P A +E ++
Sbjct: 318 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIII 364
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 117/220 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K++ DA + ++M I PDV Y ++SG G +L
Sbjct: 40 PDVVMYNTIIDGMCKDKHVNDAFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDL 99
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + P VYT+N+ ++ CK+ V EA ++ M+K G PN VT ++L+ C
Sbjct: 100 FNKMTSKNINPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCL 159
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++ AKG+ M L+GV N+ +Y IM++G EA L EEM + P T
Sbjct: 160 VNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVT 219
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ AL+L+ ++ + P + +LL
Sbjct: 220 YNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLL 259
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V + MI K + +A+ + +M + PDVV Y +++G+ G
Sbjct: 177 GVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYA 236
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM G PD+ TY+ ++ LCK ++VD+AI ++ ++ G +PN+ T L+
Sbjct: 237 LKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDG 296
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A + +++ +KG + ++TY +M+ G K EA LL +M +P
Sbjct: 297 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 356
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T++ II + ++A L+++++ +
Sbjct: 357 ALTYEIIIRSLFDNDENDKAENLLREMITR 386
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 78/146 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K + A+ +L +K GI+P++ YTI++ G+ G
Sbjct: 243 MHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGR 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G V TY V I+G C + DEA+ ++ M C PN +T
Sbjct: 303 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 362
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + KA+ +++EM +G+
Sbjct: 363 IIRSLFDNDENDKAENLLREMITRGL 388
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 122/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K + +A + ++M GI PDVV Y ++SG G +L
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M+ + P+VYT+N+ ++G CK+ ++ EA ++ M+K G KP+V T N+L+ C
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL 329
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK + + +GV N+H+Y IM+ G ++ EA L +EM P T
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ AL+L+ ++ + + ++L
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMI-RF-LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V + ++ R+ LVKE A +I N + Q G+ P++ Y+I++ G
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVN--KAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF EM +IPDV TYN I+GLCK K+ A+++VD M G + +T
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N++L ALC+ + KA ++ +M +G++ ++ TY ++DGL + +A ++ E++L
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + + + +I C GL +E+L+L+ K+ P A +E ++
Sbjct: 486 KGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIII 534
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ KE R +A +L M + GIKPDV Y ++ + K +
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHI 339
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ + G+ P++++Y++ I+G CK KVDEA+ + M P+VVT N+L+ LC+
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCK 399
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +S A ++ EM +GV + TY +LD L ++ +A LL +M + P T
Sbjct: 400 LGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICT 459
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +C+ G + +A + + ++ K + + A++
Sbjct: 460 YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 113/210 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ MI K ++ +A+ + +M + I PDVV Y ++ G+ G
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM G+ D TYN ++ LCK ++VD+AI ++ M G +P++ T TL+
Sbjct: 407 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A+ V +++ +KG L+++ Y M+ G E+ LL +M + P
Sbjct: 467 LCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T++ IIC + K ++A +L+++++ +
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLLREMITR 556
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F ++ LVK + + QM+ +GI D+V +I+++ G +
Sbjct: 70 PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++L +G P+V T I GLC + ++ +A+Q D ++ LG N V+ TL+ LC+
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G S A +++ + K V+ N+ Y ++D + + EA L EM+ K P T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C G + +A +L K++ ++ P + L+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+G+ P V+ T +I+ L + + AL +++ G + V Y +++G+ G
Sbjct: 135 KMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTS 194
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L + + P+V YN I+ +CK V+EA + M+ G P+VVT N L+
Sbjct: 195 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALI 254
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G + A + +M + + N++T+ I++DG + + EA +L M+K+
Sbjct: 255 SGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
P T+++++ C +N+A + I + P ++ ++++H
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSY-SIMIH 360
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 110/223 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I + DA + N+M + I P+V + I++ G E +
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA 301
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ M+ G+ PDV+TYN ++ C +V++A I +++ + G PN+ + + ++
Sbjct: 302 KNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHG 361
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ + +A + KEM + ++ TY ++DGL +I A L++EM +
Sbjct: 362 FCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD 421
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+++I+ +C+ +++A+ L+ K+ + P + L+
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+ Q KP + + +L +V Y + L +M G+ D+ ++ IN + +
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+ ++ ++K+G +PNV+T TL+ LC G + +A ++ G LN +Y
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+++GL + A LL + K P ++ II MC+ L+NEA +L ++V+K
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 216 FAPGARAWEALL 227
+P + AL+
Sbjct: 243 ISPDVVTYNALI 254
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + ++ L K + A+ +L +MK +GI+PD+ YT ++ G+ G
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G I DV Y I G C DE++ ++ M + GC PN VT
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEI 532
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + KA+ +++EM +G+
Sbjct: 533 IICSLFDKDENDKAEKLLREMITRGL 558
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K GF P V+ ++ ++ LVKE A I N M Q G+ PD+ Y I+++G
Sbjct: 17 MMKKGFKPNVVTYSSLMDGYCLVKEVN--KAKSIFNNMAQGGVNPDIQSYNILINGFCKI 74
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
LF+EM +IP+V TYN I+GLCK K+ A+++VD M G P+++T
Sbjct: 75 KMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITY 134
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++LL ALC+ KA ++ ++ +G++ N++TY I+++GL +A + E++L
Sbjct: 135 SSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLV 194
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + +T+ +I C G+ EAL ++ K+ P A +E ++
Sbjct: 195 KGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIII 243
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%)
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK+ KV EA + +M+K G KPNVVT ++L+ C +++KAK + M GV +
Sbjct: 1 FCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPD 60
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ +Y I+++G A L EEM + P T++++I +C+ G I+ AL+L+
Sbjct: 61 IQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVD 120
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +LL
Sbjct: 121 EMHDRGQPPDIITYSSLL 138
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 79/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K G A+ +L ++K G++P++ YTI+++G+ G
Sbjct: 122 MHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGR 181
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G +V TY V I+ C EA+ ++ M + GC PN VT
Sbjct: 182 PEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEI 241
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + KA+ ++ EM +G+
Sbjct: 242 IIRSLFDKDENDKAEKLLLEMITRGL 267
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 85/170 (50%)
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
EG + +F M+ G P+V TY+ ++G C +V++A I ++M + G P++ +
Sbjct: 4 EGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQS 63
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N L+ C+ A + +EM + + N+ TY ++DGL +I A L++EM
Sbjct: 64 YNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMH 123
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P T+ +++ +C+ ++A+ L+ K+ + P + L+
Sbjct: 124 DRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILI 173
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 122/224 (54%), Gaps = 4/224 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K+ P ++ MI L K + +AL + +M+ GI P+ V Y+ ++ G+ G
Sbjct: 334 ISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +L DEM G P+++TYN I+ LCK +++D+AI +V + G +P++ T N
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG L++ TY IM++GL EA +LL +M
Sbjct: 454 LIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNG 513
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
P + T++ II K +A +L+++++A+ G W+
Sbjct: 514 IIPDAVTYETIIRAFFHKDENEKAEKLLREMIAR----GLLKWK 553
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 117/219 (53%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ ++ +I L K++ +A + ++M I P+VV + ++ G G + LF
Sbjct: 202 NVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLF 261
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
E+++ + PDVYT+N+ ++ LCK+ K+ EA ++ M+K P+VVT N+L+ C
Sbjct: 262 HEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLV 321
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+++KAK V+ + V + H+Y IM++GL + EA L EM + P + T+
Sbjct: 322 NEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTY 381
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G + A +L+ ++ P + +L+
Sbjct: 382 SSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGI--V 56
M ++ P ++ F ++ LVK A+ + +Q++ GI PD+V + I+++ +
Sbjct: 52 MFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHL 111
Query: 57 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
E D+ + ++L +G PD T+N I GLC KV EA+ D +I LG + V
Sbjct: 112 REMDFSF--SMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQV 169
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ TL+ LC+ G+ A +++++ K V N+ Y ++D L + EA +L EM
Sbjct: 170 SYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEM 229
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ K P TF+++I C G +A L +IV K+ P + ++
Sbjct: 230 ITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMV 280
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++L + + + PD Y+I+++G+ + LF EM G+ P+ TY+ I+
Sbjct: 327 AKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLID 386
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A +VD M G PN+ T N+L+ ALC+ + KA ++K++ +G++
Sbjct: 387 GLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQP 446
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY I++DGL + A + +++L K + T++ +I +C+ GL +EA L+
Sbjct: 447 DMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLL 506
Query: 209 KKIVAKSFAPGARAWEALL 227
K+ P A +E ++
Sbjct: 507 SKMEDNGIIPDAVTYETII 525
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 115/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F M+ L KE + +A ++ M ++ + PDVV Y ++ G + K +
Sbjct: 271 PDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHV 330
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + + PD ++Y++ INGLCK VDEA+ + M G PN VT ++L+ LC+
Sbjct: 331 LIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCK 390
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G S A ++ EM G N+ TY ++D L +I +A L++++ + P T
Sbjct: 391 SGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCT 450
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G ++ A ++ + ++ K ++ + + ++
Sbjct: 451 YNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMI 490
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 113/235 (48%), Gaps = 8/235 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I + DA + +++ I PDV + I++ + EG + +
Sbjct: 236 PNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSV 295
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ ++PDV TYN ++G C N+V++A ++ + K+ P+ + + ++ LC+
Sbjct: 296 IAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCK 355
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + EM +G+ N TY ++DGL A L++EM P T
Sbjct: 356 VKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT 415
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--------LHSGSDL 234
++++I +C+ I++A+ L+KKI + P + L+ LH+ D+
Sbjct: 416 YNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDV 470
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 37/259 (14%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P ++ F +I R MD + +L ++ + G +PD + + ++ G+ G +
Sbjct: 93 GITPDIVTFNILINCYC-HLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKE 151
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVD 104
D ++ LG D +Y INGLCK + A+Q I+D
Sbjct: 152 ALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Query: 105 S----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
S MI PNVVT N+L+ C G A + E+ LK +
Sbjct: 212 SLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINP 271
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+++T+ IM+D L + ++ EA ++ M+K+C P T+++++ C +N+A ++
Sbjct: 272 DVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVL 331
Query: 209 KKIVAKSFAPGARAWEALL 227
I AP A ++ ++
Sbjct: 332 IIISKIRVAPDAHSYSIMI 350
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD--YVKLDELFDEMLVLGLIPDVYTYNV 85
+A+ N M + P ++ + +L +V + Y LF ++ G+ PD+ T+N+
Sbjct: 44 NAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNI 103
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
IN C ++D + ++ ++K+G +P+ +T NTL+ LC G + +A + G
Sbjct: 104 LINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLG 163
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L+ +Y +++GL E A +L ++ K + II +C+ L+ EA
Sbjct: 164 FHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAY 223
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L +++ K +P + +L+
Sbjct: 224 VLYSEMITKRISPNVVTFNSLI 245
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L +++ + +VV Y+ ++ + + +
Sbjct: 162 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTE 221
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L+ EM+ + P+V T+N I G C + +A ++ ++ P+V T N ++
Sbjct: 222 AYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVD 281
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +AK V+ M + V ++ TY ++DG E+ +A +L + K P
Sbjct: 282 ALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAP 341
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I +C+ +++EAL L ++ + AP + +L+
Sbjct: 342 DAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLI 385
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD--LSKAKGVM 138
Y+++ +I + VD A+ + M ++ P+++ N +LG+L ++ + A +
Sbjct: 29 YSHSTFIPN--NFDDVDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLF 86
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
++ G+ ++ T+ I+++ E+ + +L ++LK + P + TF+ +I +C
Sbjct: 87 HQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVN 146
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
G + EAL +++ F ++ L+
Sbjct: 147 GKVKEALHFHDHVISLGFHLDQVSYGTLI 175
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 122/224 (54%), Gaps = 4/224 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K+ P ++ MI L K + +AL + +M+ GI P+ V Y+ ++ G+ G
Sbjct: 334 ISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +L DEM G P+++TYN I+ LCK +++D+AI +V + G +P++ T N
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG L++ TY IM++GL EA +LL +M
Sbjct: 454 LIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNG 513
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
P + T++ II K +A +L+++++A+ G W+
Sbjct: 514 IIPDAVTYETIIRAFFHKDENEKAEKLLREMIAR----GLLKWK 553
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 117/219 (53%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ ++ +I L K++ +A + ++M I P+VV + ++ G G + LF
Sbjct: 202 NVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLF 261
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
E+++ + PDVYT+N+ ++ LCK+ K+ EA ++ M+K P+VVT N+L+ C
Sbjct: 262 HEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLV 321
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+++KAK V+ + V + H+Y IM++GL + EA L EM + P + T+
Sbjct: 322 NEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTY 381
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G + A +L+ ++ P + +L+
Sbjct: 382 SSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGI--V 56
M ++ P ++ F ++ LVK A+ + +Q++ GI PD+V + I+++ +
Sbjct: 52 MFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHL 111
Query: 57 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
E D+ + ++L +G PD T+N I GLC KV EA+ D +I LG + V
Sbjct: 112 REMDFSF--SMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQV 169
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ TL+ LC+ G+ A +++++ K V N+ Y ++D L + EA +L EM
Sbjct: 170 SYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEM 229
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ K P TF+++I C G +A L +IV K+ P + ++
Sbjct: 230 ITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMV 280
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++L + + + PD Y+I+++G+ + LF EM G+ P+ TY+ I+
Sbjct: 327 AKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLID 386
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A +VD M G PN+ T N+L+ ALC+ + KA ++K++ +G++
Sbjct: 387 GLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQP 446
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY I++DGL + A + +++L K + T++ +I +C+ GL +EA L+
Sbjct: 447 DMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLL 506
Query: 209 KKIVAKSFAPGARAWEALL 227
K+ P A +E ++
Sbjct: 507 SKMEDNGIIPDAVTYETII 525
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 115/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F M+ L KE + +A ++ M ++ + PDVV Y ++ G + K +
Sbjct: 271 PDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHV 330
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + + PD ++Y++ INGLCK VDEA+ + M G PN VT ++L+ LC+
Sbjct: 331 LIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCK 390
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G S A ++ EM G N+ TY ++D L +I +A L++++ + P T
Sbjct: 391 SGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCT 450
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G ++ A ++ + ++ K ++ + + ++
Sbjct: 451 YNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMI 490
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 113/235 (48%), Gaps = 8/235 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I + DA + +++ I PDV + I++ + EG + +
Sbjct: 236 PNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSV 295
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ ++PDV TYN ++G C N+V++A ++ + K+ P+ + + ++ LC+
Sbjct: 296 IAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCK 355
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + EM +G+ N TY ++DGL A L++EM P T
Sbjct: 356 VKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT 415
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--------LHSGSDL 234
++++I +C+ I++A+ L+KKI + P + L+ LH+ D+
Sbjct: 416 YNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDV 470
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 37/259 (14%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P ++ F +I R MD + +L ++ + G +PD + + ++ G+ G +
Sbjct: 93 GITPDIVTFNILINCYC-HLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKE 151
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVD 104
D ++ LG D +Y INGLCK + A+Q I+D
Sbjct: 152 ALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Query: 105 S----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
S MI PNVVT N+L+ C G A + E+ LK +
Sbjct: 212 SLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINP 271
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+++T+ IM+D L + ++ EA ++ M+K+C P T+++++ C +N+A ++
Sbjct: 272 DVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVL 331
Query: 209 KKIVAKSFAPGARAWEALL 227
I AP A ++ ++
Sbjct: 332 IIISKIRVAPDAHSYSIMI 350
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD--YVKLDELFDEMLVLGLIPDVYTYNV 85
+A+ N M + P ++ + +L +V + Y LF ++ G+ PD+ T+N+
Sbjct: 44 NAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNI 103
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
IN C ++D + ++ ++K+G +P+ +T NTL+ LC G + +A + G
Sbjct: 104 LINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLG 163
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L+ +Y +++GL E A +L ++ K + II +C+ L+ EA
Sbjct: 164 FHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAY 223
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L +++ K +P + +L+
Sbjct: 224 VLYSEMITKRISPNVVTFNSLI 245
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L +++ + +VV Y+ ++ + + +
Sbjct: 162 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTE 221
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L+ EM+ + P+V T+N I G C + +A ++ ++ P+V T N ++
Sbjct: 222 AYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVD 281
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +AK V+ M + V ++ TY ++DG E+ +A +L + K P
Sbjct: 282 ALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAP 341
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I +C+ +++EAL L ++ + AP + +L+
Sbjct: 342 DAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLI 385
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD--LSKAKGVM 138
Y+++ +I + VD A+ + M ++ P+++ N +LG+L ++ + A +
Sbjct: 29 YSHSTFIPN--NFDDVDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLF 86
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
++ G+ ++ T+ I+++ E+ + +L ++LK + P + TF+ +I +C
Sbjct: 87 HQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVN 146
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
G + EAL +++ F ++ L+
Sbjct: 147 GKVKEALHFHDHVISLGFHLDQVSYGTLI 175
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 122/224 (54%), Gaps = 4/224 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K+ P ++ MI L K + +AL + +M+ GI P+ V Y+ ++ G+ G
Sbjct: 334 ISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +L DEM G P+++TYN I+ LCK +++D+AI +V + G +P++ T N
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG L++ TY IM++GL EA +LL +M
Sbjct: 454 LIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNG 513
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
P + T++ II K +A +L+++++A+ G W+
Sbjct: 514 IIPDAVTYETIIRAFFHKDENEKAEKLLREMIAR----GLLKWK 553
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 117/219 (53%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ ++ +I L K++ +A + ++M I P+VV + ++ G G + LF
Sbjct: 202 NVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLF 261
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
E+++ + PDVYT+N+ ++ LCK+ K+ EA ++ M+K P+VVT N+L+ C
Sbjct: 262 HEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLV 321
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+++KAK V+ + V + H+Y IM++GL + EA L EM + P + T+
Sbjct: 322 NEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTY 381
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G + A +L+ ++ P + +L+
Sbjct: 382 SSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLI 420
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGI--V 56
M ++ P ++ F ++ LVK A+ + +Q++ GI PD+V + I+++ +
Sbjct: 52 MFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNILINCYCHL 111
Query: 57 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
E D+ + ++L +G PD T+N I GLC KV EA+ D +I LG + V
Sbjct: 112 REMDFSF--SMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQV 169
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ TL+ LC+ G+ A +++++ K V N+ Y ++D L + EA +L EM
Sbjct: 170 SYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAYVLYSEM 229
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ K P TF+++I C G +A L +IV K+ P + ++
Sbjct: 230 ITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMV 280
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 108/199 (54%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++L + + + PD Y+I+++G+ + LF EM G+ P+ TY+ I+
Sbjct: 327 AKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLID 386
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A +VD M G PN+ T N+L+ ALC+ + KA ++K++ +G++
Sbjct: 387 GLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQP 446
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY I++DGL + A + +++L K + T++ +I +C+ GL +EA L+
Sbjct: 447 DMCTYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLL 506
Query: 209 KKIVAKSFAPGARAWEALL 227
K+ P A +E ++
Sbjct: 507 SKMEDNGIIPDAVTYETII 525
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 115/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F M+ L KE + +A ++ M ++ + PDVV Y ++ G + K +
Sbjct: 271 PDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHV 330
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + + PD ++Y++ INGLCK VDEA+ + M G PN VT ++L+ LC+
Sbjct: 331 LIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCK 390
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G S A ++ EM G N+ TY ++D L +I +A L++++ + P T
Sbjct: 391 SGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCT 450
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G ++ A ++ + ++ K ++ + + ++
Sbjct: 451 YNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNIMI 490
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 113/235 (48%), Gaps = 8/235 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I + DA + +++ I PDV + I++ + EG + +
Sbjct: 236 PNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVDALCKEGKMKEAKSV 295
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ ++PDV TYN ++G C N+V++A ++ + K+ P+ + + ++ LC+
Sbjct: 296 IAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAPDAHSYSIMINGLCK 355
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + EM +G+ N TY ++DGL A L++EM P T
Sbjct: 356 VKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFT 415
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--------LHSGSDL 234
++++I +C+ I++A+ L+KKI + P + L+ LH+ D+
Sbjct: 416 YNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGLCKGGRLHNARDV 470
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 37/259 (14%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G P ++ F +I R MD + +L ++ + G +PD + + ++ G+ G +
Sbjct: 93 GITPDIVTFNILINCYC-HLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKE 151
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVD 104
D ++ LG D +Y INGLCK + A+Q I+D
Sbjct: 152 ALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Query: 105 S----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
S MI PNVVT N+L+ C G A + E+ LK +
Sbjct: 212 SLCKDKLVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINP 271
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+++T+ IM+D L + ++ EA ++ M+K+C P T+++++ C +N+A ++
Sbjct: 272 DVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVL 331
Query: 209 KKIVAKSFAPGARAWEALL 227
I AP A ++ ++
Sbjct: 332 IIISKIRVAPDAHSYSIMI 350
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD--YVKLDELFDEMLVLGLIPDVYTYNV 85
+A+ N M + P ++ + +L +V + Y LF ++ G+ PD+ T+N+
Sbjct: 44 NAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLFHQLEFHGITPDIVTFNI 103
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
IN C ++D + ++ ++K+G +P+ +T NTL+ LC G + +A + G
Sbjct: 104 LINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFHDHVISLG 163
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L+ +Y +++GL E A +L ++ K + II +C+ L+ EA
Sbjct: 164 FHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTEAY 223
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L +++ K +P + +L+
Sbjct: 224 VLYSEMITKRISPNVVTFNSLI 245
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L +++ + +VV Y+ ++ + + +
Sbjct: 162 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLCKDKLVTE 221
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L+ EM+ + P+V T+N I G C + +A ++ ++ P+V T N ++
Sbjct: 222 AYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINPDVYTFNIMVD 281
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +AK V+ M + V ++ TY ++DG E+ +A +L + K P
Sbjct: 282 ALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVLIIISKIRVAP 341
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I +C+ +++EAL L ++ + AP + +L+
Sbjct: 342 DAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLI 385
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD--LSKAKGVM 138
Y+++ +I + VD A+ + M ++ P+++ N +LG+L ++ + A +
Sbjct: 29 YSHSTFIPN--NFDDVDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYPTAISLF 86
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
++ G+ ++ T+ I+++ E+ + +L ++LK + P + TF+ +I +C
Sbjct: 87 HQLEFHGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVN 146
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
G + EAL +++ F ++ L+
Sbjct: 147 GKVKEALHFHDHVISLGFHLDQVSYGTLI 175
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K++ DA + ++ I PDV Y ++SG G +L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M +IPDVYT+++ ++G CK + EA ++ M+K KP+VVT ++L+ C
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KA+ + M +GV N+ +Y IM++G + EA L +EM K +P T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I+ ALEL+ ++ + P + ++L
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSIL 550
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 110/197 (55%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I N M G+ +V Y I+++G + +LF EM + PDV TY+ I+GLC
Sbjct: 460 IFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLC 519
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K ++ A+++VD M G +P+++T N++L ALC+ + KA ++ ++ +G+ +++
Sbjct: 520 KSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMN 579
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY I++ GL ++ +A + E++L K + + +I C KGL +EAL L+ K+
Sbjct: 580 TYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKM 639
Query: 212 VAKSFAPGARAWEALLL 228
P A+ +E ++L
Sbjct: 640 EENGCIPDAKTYEIIIL 656
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 118/220 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F+ ++ K+ +A +L M + IKPDVV Y+ ++ G + K + +
Sbjct: 401 PDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESI 460
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ +V +YN+ ING CK VDEA+++ M P+V+T ++L+ LC+
Sbjct: 461 FNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCK 520
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM +G + ++ TY +LD L K + +A LL ++ + P +T
Sbjct: 521 SGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNT 580
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +CQ G + +A ++ + ++ K + A+ ++
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V + MI K + +A+ + +M I PDV+ Y+ ++ G+ G
Sbjct: 464 MSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G PD+ TYN ++ LCK++ VD+AI ++ + G +P++ T
Sbjct: 524 ISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTI 583
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC++G L A+ V +++ +KG L+++ Y +M+ G K EA LL +M +
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++ +
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + +I + DA+ + N+M I PDV ++I++ G +G+ + +
Sbjct: 366 PDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNV 425
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ + PDV TY+ ++G C N+V++A I ++M G NV + N ++ C+
Sbjct: 426 LAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCK 485
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + KEM K + ++ TY ++DGL I A L++EM + P T
Sbjct: 486 IKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIIT 545
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I+ +C+K +++A+ L+ K+ + P + L+
Sbjct: 546 YNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILV 585
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K+ A+ +L ++K GI+PD+ YTI++ G+ G
Sbjct: 534 MHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGK 593
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+++LV G DVY Y V I G C + DEA+ ++ M + GC P+ T
Sbjct: 594 LEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEI 653
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM ++G+
Sbjct: 654 IILSLFEKDENDMAEKLLREMIMRGL 679
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
Y ++ ++G +PD + T + G +G + D+++ +G D +Y INGL
Sbjct: 249 YTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGL 308
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
CK + A++++ +P+VV NT++ +C+ ++ A + E K + ++
Sbjct: 309 CKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDV 368
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY ++ G ++ +A L +M K P TF ++ C+ G I EA ++
Sbjct: 369 FTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAM 428
Query: 211 IVAKSFAPGARAWEALL 227
++ +S P + +L+
Sbjct: 429 MMKQSIKPDVVTYSSLM 445
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++G P + MI K + +AL + N+M+ I P+ V Y ++ G+ G
Sbjct: 331 RMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRIS 390
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L DEM V G PD++TY+ I+ LCK N +D+AI +V + G +PN+ T N L+
Sbjct: 391 HAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILI 450
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A+ V +++ KG LN+ TY I+++GL + +A LL +M
Sbjct: 451 DGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDIN 510
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T++ II + K +A +L++++VA+
Sbjct: 511 PNVVTYETIIRSLFYKDYNEKAEKLLREMVAR 542
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 111/199 (55%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++L+ + + G+ PD Y I+++G + LF+EM + P+ TYN I+
Sbjct: 322 AKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLID 381
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK ++ A ++VD M G P++ T ++L+ ALC+ L KA ++K++ +G++
Sbjct: 382 GLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQP 441
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N++TY I++DGL + A + +++L K + T++ +I +C++GL ++A L+
Sbjct: 442 NMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALL 501
Query: 209 KKIVAKSFAPGARAWEALL 227
K+ P +E ++
Sbjct: 502 SKMEDNDINPNVVTYETII 520
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 116/218 (53%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ ++ +I L K++ +DA + ++M I PDVV + ++ G G + LF
Sbjct: 198 VVMYSIIIDSLCKDKLVIDAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFH 257
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M++ + P+ YT+N+ ++ LCK+ V A + MIK KP+VVT N+L+ C
Sbjct: 258 QMVLKNINPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVN 317
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++KAK V+ + GV + +Y IM++G + EA L EM + P + T++
Sbjct: 318 EVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYN 377
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ A +L+ ++ P + +L+
Sbjct: 378 SLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLI 415
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 110/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F ++ L KE A L M + IKPDVV Y ++ G + K +
Sbjct: 266 PNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHV 325
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +G+ PD +YN+ ING CK V+EA+ + + M PN VT N+L+ LC+
Sbjct: 326 LSTIARMGVAPDAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCK 385
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM + G ++ TY ++D L + +A L++++ + P T
Sbjct: 386 SGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYT 445
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G + A ++ + ++ K ++ R + L+
Sbjct: 446 YNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILI 485
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA-LYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M ++ P +++F ++ LVK + + + +M+ +GI P +V IV++
Sbjct: 48 MLRMNPTPSIVEFNKILTSLVKTKTHYNTVISFFRKMQFNGIVPSIVTLGIVINCYCHLR 107
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ LF ++L +G PD T N + G C KV EA+ D ++ LG + N VT
Sbjct: 108 EINFAFSLFGKILKMGYQPDTITLNTLVKGFCLNGKVKEALHFHDRVLALGFQLNQVTYA 167
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ LC+ G+ A V++++ K V ++ Y I++D L + +A L EM+ K
Sbjct: 168 TLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVIDAYELYSEMIAK 227
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+++I C G + EA L ++V K+ P + L+
Sbjct: 228 TISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILV 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L ++ + DVV Y+I++ + + +
Sbjct: 157 LGFQLNQVTYATLINGLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVID 216
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ EM+ + PDV T+N I G C ++ EA + M+ PN T N L+
Sbjct: 217 AYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVD 276
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G++ AK + M ++ ++ TY ++DG E+ +A +L + + P
Sbjct: 277 ALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAP 336
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++ +I C+ ++NEAL L ++ + +P + +L+
Sbjct: 337 DAQSYNIMINGFCKIKMVNEALSLFNEMRCQRISPNTVTYNSLI 380
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 2/242 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I R +A + +QM I P+ + I++ + EG+
Sbjct: 231 PDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNA 290
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ + PDV TYN ++G C N+V++A ++ ++ ++G P+ + N ++ C+
Sbjct: 291 LAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCK 350
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++A + EM + + N TY ++DGL I A L++EM P T
Sbjct: 351 IKMVNEALSLFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFT 410
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLF 245
+ ++I +C+ +++A+ L+KKI + P + L+ L G L ++ F L
Sbjct: 411 YSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLL 470
Query: 246 NQ 247
+
Sbjct: 471 TK 472
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P + + +I L K R A ++++M +G PD+ Y+ ++ +
Sbjct: 364 MRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVNGQPPDIFTYSSLIDALCKNNH 423
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ G+ P++YTYN+ I+GLCK ++ A + ++ G N+ T N
Sbjct: 424 LDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNI 483
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC+ G KA+ ++ +M + N+ TY ++ L K +A LL EM+ +
Sbjct: 484 LINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSLFYKDYNEKAEKLLREMVAR 542
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G +PD + ++ G G + D +L LG + TY IN
Sbjct: 112 AFSLFGKILKMGYQPDTITLNTLVKGFCLNGKVKEALHFHDRVLALGFQLNQVTYATLIN 171
Query: 89 GLCKQNKVDEAIQ-------------------IVDS----------------MIKLGCKP 113
GLCK + A+Q I+DS MI P
Sbjct: 172 GLCKMGETRAALQVLRKIDGKLVNTDVVMYSIIIDSLCKDKLVIDAYELYSEMIAKTISP 231
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
+VVT N+L+ C G L +A G+ +M LK + N +T+ I++D L + + A L
Sbjct: 232 DVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINPNDYTFNILVDALCKEGNVKGAKNAL 291
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M+K P T+++++ C +N+A ++ I AP A+++ ++
Sbjct: 292 AMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMI 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ +I L K A+ ++ ++K GI+P++ Y I++ G+ G
Sbjct: 403 GQPPDIFTYSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNA 462
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F ++L G ++ TYN+ INGLCK+ D+A ++ M PNVVT T++ +
Sbjct: 463 QDVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRS 522
Query: 125 LCEAGDLSKAKGVMKEMGLKGV 146
L KA+ +++EM +G+
Sbjct: 523 LFYKDYNEKAEKLLREMVARGL 544
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 118/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+ ++ F MI L +E + A + M+ G+KP+VV Y V++G G
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F M L PD YTYN +I+ LCK+ +++EA ++ +++ G PN VT N
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C GDL KA EM +G+ ++ TY +++ L + I EA +++EM +K
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ I C+ G +AL L ++V K+ P + +L+
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V + +I L E+R +A ++ +M++ G++PDVV Y I ++G G+
Sbjct: 348 MMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN 407
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K LFDEM+ + P V TY I+ K+N++ EA + IK G P+++ N
Sbjct: 408 AKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNA 467
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G++ +A ++KEM V + T+ ++ G + ++ EA LL+EM ++
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +++ +I ++G + +ALE+ ++++ F P + AL+
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ P + I L KE R +A +L ++ + G+ P+ V Y ++ G +GD
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K DEM+ G++ V+TYN+ I+ L + +++EA ++ M + G +P+VVT N
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ C G+ KA + EM K + + TY ++D + + EA ++ +K+
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P F+ +I C G I+ A +L+K++ P + L+
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLM 504
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T +I K R +A + ++G+ PD++ + ++ G G+ + +L
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM ++PD T+N + G C++ KV+EA +++D M + G KP+ ++ NTL+ +
Sbjct: 485 LKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK 544
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD+ A V EM G + L TY ++ G E A LL EM K P ST
Sbjct: 545 RGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604
Query: 188 FDNIICCM 195
+ +I M
Sbjct: 605 YLYVIEAM 612
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+++EM+ + + + T+N+ IN LC++ K +A + M G KPNVVT NT++ C
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
G A + K M K ++ + +TY + L + I EAS +L ++L+ P +
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323
Query: 187 TFDNIICCMCQKGLINEAL----ELMKK-IVAKSFA 217
T++ +I C KG +++A E+M + IVA F
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFT 359
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +++ +E + +A +L++MK+ GIKPD + Y ++SG GD E+
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FDEML LG P + TYN I G K + D A +++ M G P+ T ++ A+
Sbjct: 555 FDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614
Query: 128 AGDL 131
DL
Sbjct: 615 NDDL 618
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC------------------------ 118
+++ ++ C+ K DEA++ ++ M + P TC
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209
Query: 119 -----------NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
N ++ LC G KAK + M + GV+ N+ TY +++G + +
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
AS + + M K P T+++ I +C++ I EA ++ K++ P A + AL+
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 111/205 (54%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + +I+ L ++ + AL ++N+M + G KPD+ Y ++++G+ G
Sbjct: 386 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 445
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ L + + G IPD++TYN ++G C+Q K+D AI++V+ M G P+V+T NTLL
Sbjct: 446 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 505
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ + + K M KG N+ TY +++ L ++ EA LL EM K P
Sbjct: 506 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 565
Query: 185 SSTFDNIICCMCQKGLINEALELMK 209
+F +I C+ G ++ A L +
Sbjct: 566 VVSFGTLITGFCKVGDLDGAYGLFR 590
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 116/218 (53%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V +T I+ + R AL +L M G + V Y V++G GD + ELFD
Sbjct: 146 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 205
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EML L PDV T+N ++ LCK+ V E+ ++ D ++K G PN+ T N + LC+ G
Sbjct: 206 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 265
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
L +A ++ + +G+ ++ TY ++ GL K+ + EA L +M+ F P T++
Sbjct: 266 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 325
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+II C+KG++ +A ++K V K F P + +L+
Sbjct: 326 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 363
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 36/250 (14%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ ++ + A+ ++N+M G+ PDV+ Y +L+G+ ++
Sbjct: 456 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 515
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+F M G P++ TYN I LC KV+EA+ ++ M G P+VV+ TL+
Sbjct: 516 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 575
Query: 125 LCEAGDLSKAKGVMK------------------------------------EMGLKGVEL 148
C+ GDL A G+ + EM G +
Sbjct: 576 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 635
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ +TYR+++DG + + L E ++K F P +TF ++ C+C + + EA+ ++
Sbjct: 636 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 695
Query: 209 KKIVAKSFAP 218
+V K P
Sbjct: 696 HLMVQKDIVP 705
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 112/223 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + ++ ++ A+ + G++P ++ Y ++ G+ +G +
Sbjct: 351 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 410
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L +EM G PD++TYN+ INGLCK + +A ++ I GC P++ T NTL+
Sbjct: 411 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 470
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C L A ++ M +G+ ++ TY +L+GL A+ E + + M +K P
Sbjct: 471 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 530
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ II +C +NEA++L+ ++ +K P ++ L+
Sbjct: 531 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 573
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 116/225 (51%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G CP + F I+ L KE A+ +L + ++G++PDVV Y V+ G+ + V
Sbjct: 244 KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVV 303
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +E +M+ G P+ +TYN I+G CK+ V +A +I+ + G KP+ T +L+
Sbjct: 304 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 363
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ GD +A V K+ KG+ ++ Y ++ GL + I A L+ EM +K
Sbjct: 364 NGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK 423
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ II +C+ G +++A L+ + K P + L+
Sbjct: 424 PDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLV 468
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 113/199 (56%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++M + + PDV + ++ + +G ++ + LFD++L G+ P+++T+N++I
Sbjct: 200 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQ 259
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK+ +D A++++ + + G +P+VVT NT++ LC + +A+ + +M G E
Sbjct: 260 GLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEP 319
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N TY ++DG K + +A+ +L++ + K F P T+ +++ CQ G ++A+ +
Sbjct: 320 NDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVF 379
Query: 209 KKIVAKSFAPGARAWEALL 227
K + K P + L+
Sbjct: 380 KDGLGKGLRPSIIVYNTLI 398
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +I K+ +DA IL G KPD Y +++G +GD +
Sbjct: 316 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 375
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+F + L GL P + YN I GLC+Q + A+Q+++ M + GCKP++ T N ++
Sbjct: 376 MAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIING 435
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G LS A ++ + KG ++ TY ++DG + ++ A L+ M + P
Sbjct: 436 LCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPD 495
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ ++ +C+ E +E+ K + K AP + ++
Sbjct: 496 VITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTII 538
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 115/221 (52%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP V F ++ L K+ +++ + +++ + G+ P++ + I + G+ EG +
Sbjct: 213 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 272
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L + GL PDV TYN I GLC++++V EA + + M+ G +PN T N+++ C
Sbjct: 273 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 332
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ G + A ++K+ KG + + TY +++G + +A + ++ L K P
Sbjct: 333 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 392
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +CQ+GLI AL+LM ++ K P + ++
Sbjct: 393 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 433
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 116/223 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I L ++ R ++A L++M G +P+ Y ++ G +G V
Sbjct: 281 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 340
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + + + G PD +TY +NG C+ D+A+ + + G +P+++ NTL+
Sbjct: 341 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 400
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G + A +M EM KG + ++ TY ++++GL + +A+ L+ + + K P
Sbjct: 401 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 460
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ ++ C++ ++ A+EL+ ++ ++ P + LL
Sbjct: 461 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 503
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + ++ LV+ A + +MK ++ DV YTI + G L
Sbjct: 109 PSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRL 168
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M VLG + Y + G + D A ++ D M++ P+V T N L+ ALC+
Sbjct: 169 LRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCK 228
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +++ + ++ +GV NL T+ I + GL + + A LL + ++ P T
Sbjct: 229 KGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 288
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +IC +C+K + EA E + K+V F P + +++
Sbjct: 289 YNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSII 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ F+ M + P VY+YN +N L + ++A ++ M + +V T + +
Sbjct: 97 DTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSF 156
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C G A +++ M + G N Y ++ G + A L +EML+ C P
Sbjct: 157 CRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDV 216
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+TF+ ++ +C+KG + E+ L K++ + P
Sbjct: 217 TTFNKLVHALCKKGFVLESERLFDKVLKRGVCPN 250
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + ++MK++G PD Y +++ G G+ + + E + G IP + T+ +N
Sbjct: 621 ALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLN 680
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC ++KV EA+ I+ M++ P+ V NT+ A + A ++ E LK +
Sbjct: 681 CLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEA---DKKVVAAPKIVVEHLLKKGHI 735
Query: 149 NLHTYRIMLDGLVGK 163
H Y + DG+ K
Sbjct: 736 TYHAYEFLYDGVRDK 750
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 123/226 (54%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P V+ + +I ++ A ILN M Q G+ DV Y+I+++G
Sbjct: 303 KNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVD 362
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +LF EM L+PD TY+ I+GLCK ++ +A ++V M G +PN++T N+LL
Sbjct: 363 EAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLL 422
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
ALC+ + KA ++++ +G++ L TY I++ GL + +A ++ +++L K +
Sbjct: 423 NALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYN 482
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
T+ +I C +GL +EAL L+ K+ P A+ +E ++L
Sbjct: 483 LDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIIL 528
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I + K++ DA + ++M I PDVV Y ++SG G L
Sbjct: 203 PNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGL 262
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M++ + P+VYT ++ ++ CK K EA +V ++K G KPNVVT N+L+ C
Sbjct: 263 LHKMILENINPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCL 322
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KA+ ++ M +GV ++ +Y IM++G + EA L +EM + P + T
Sbjct: 323 VKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTIT 382
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I++A EL+ ++ + P + +LL
Sbjct: 383 YSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLL 422
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L ++ ++P+VV YT+++ G+ +
Sbjct: 165 GFQLNQVSYGALINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDA 224
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ EM+ + PDV TYN I+G C ++ +AI ++ MI PNV T + L+ A
Sbjct: 225 FNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDA 284
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G +AK V+ + GV+ N+ TY ++DG ++ +A ++L M ++
Sbjct: 285 FCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIAD 344
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ +++EA++L K++ + P + +L+
Sbjct: 345 VQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLI 387
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V ++ MI K + +A+ + +M+ + PD + Y+ ++ G+ G
Sbjct: 336 MAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGR 395
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL EM G P++ TYN +N LC+ + VD+AI ++ G +P + T
Sbjct: 396 ISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTI 455
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +G L A+ V +++ +KG L+++TY M+ G + EA LL +M
Sbjct: 456 LIKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNG 515
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++ +
Sbjct: 516 CMPNAKTYEIIILSLFKKDENDMAEKLLREMIRR 549
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 110/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F M+ LVK A+ + +M+ +G+ +++ +I+++ G +
Sbjct: 63 PPIFHFGVMLGSLVKANHYTTAVSLHRKMELNGVASNLITMSILINCFCHLGQNPLSFSV 122
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L +G P+V I GLC + +V EA+ D ++ G + N V+ L+ LC+
Sbjct: 123 FAKILKMGYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLCK 182
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + K V+ N+ Y +++DG+ + +A L EM+ K +P T
Sbjct: 183 VGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVT 242
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++N+I C G + +A+ L+ K++ ++ P L+
Sbjct: 243 YNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILV 282
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++I + DA+ +L++M + I P+V +I++ +G + +
Sbjct: 238 PDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAV 297
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ G+ P+V TYN I+G C +V++A I+++M + G +V + + ++ C+
Sbjct: 298 VAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCK 357
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + KEM + + + TY ++DGL I +A L+ EM + P T
Sbjct: 358 IKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIIT 417
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++++ +CQ +++A+ L++K + P + L+
Sbjct: 418 YNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILI 457
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
+ E+ + N M P + + ++L +V Y L +M + G+ ++
Sbjct: 41 IHEQDEHSLVSSFNHMLHQNPIPPIFHFGVMLGSLVKANHYTTAVSLHRKMELNGVASNL 100
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
T ++ IN C + + + ++K+G +PNV+ T++ LC G++ +A +
Sbjct: 101 ITMSILINCFCHLGQNPLSFSVFAKILKMGYEPNVIILTTIIKGLCLKGEVREALHFHDK 160
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+ +G +LN +Y +++GL E A LL + K P + II MC+ L
Sbjct: 161 VVAQGFQLNQVSYGALINGLCKVGETRAALELLRRVDGKIVQPNVVMYTMIIDGMCKDKL 220
Query: 201 INEALELMKKIVAKSFAPGARAWEALL 227
+N+A L +++AK P + L+
Sbjct: 221 VNDAFNLYSEMIAKRIFPDVVTYNNLI 247
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L + A+ +L + K GI+P + YTI++ G+ G
Sbjct: 406 MSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGR 465
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G DVYTY I G C + DEA+ ++ M GC PN T
Sbjct: 466 LKDAQVVFQDLLIKGYNLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEI 525
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + A+ +++EM +G+
Sbjct: 526 IILSLFKKDENDMAEKLLREMIRRGL 551
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK---- 95
G +P+V+ T ++ G+ +G+ + D+++ G + +Y INGLCK +
Sbjct: 130 GYEPNVIILTTIIKGLCLKGEVREALHFHDKVVAQGFQLNQVSYGALINGLCKVGETRAA 189
Query: 96 -------------------------------VDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
V++A + MI P+VVT N L+
Sbjct: 190 LELLRRVDGKIVQPNVVMYTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVTYNNLISG 249
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G L A G++ +M L+ + N++T I++D + EA ++ ++K P
Sbjct: 250 FCVVGQLKDAIGLLHKMILENINPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPN 309
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++++I C +N+A ++ + + +++ ++
Sbjct: 310 VVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMI 352
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 116/221 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + ++I L+K + +A + N +K G PD V YT V+ G G + +L
Sbjct: 269 PSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKL 328
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ EM+ GL+P+ YTYNV I G CK EA ++ D M G NVV+ +T++ L
Sbjct: 329 WFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYL 388
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A + EM KG+ +L +Y ++ GL + E+ +A+ LL ++L + P S+
Sbjct: 389 HGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSS 448
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
F +I C+C+ G A+ L+K + + P A + +++
Sbjct: 449 FTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMII 489
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I+ E + + +L Q+ + G+ D + +++G + Y ++ E+ M+ +
Sbjct: 207 LIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMK 266
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
P +YTY INGL K+ K DEA ++ + + G P+ V T++ C+ G L++A+
Sbjct: 267 CNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEAR 326
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ EM KG+ N +TY +M+ G + EA L ++M + + ++ +I +
Sbjct: 327 KLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGL 386
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL 227
G +EAL L ++ K A ++ +L+
Sbjct: 387 YLHGKTDEALSLFHEMSRKGIARDLISYNSLI 418
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + MI K +A + + M G +VV Y+ ++SG+ G
Sbjct: 332 MIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGK 391
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF EM G+ D+ +YN I GLC++ ++ +A +++ ++ G +P+V +
Sbjct: 392 TDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTP 451
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ GD A ++K+M + +E T+ M+ GL K + + L +ML
Sbjct: 452 LIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWK 511
Query: 181 FYPRSSTFDNIICCMCQKGLINEAL 205
P TF+++I C+ ++ +++ L
Sbjct: 512 LKPNMQTFEHLIDCLKRENRLDDIL 536
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 8/240 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD---GIKPDVVCYTIVLSGIVA 57
++K+GF P F + +K R D ++ L ++ + G+ DV ++ A
Sbjct: 155 LKKVGFLPSASSFNVCLLACLKVGR-TDLVWKLYELMIESGVGVNIDVETVGCLIKAFCA 213
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
E EL ++L GL D +N ING CKQ + D +I+ MI + C P++ T
Sbjct: 214 ENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYT 273
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ L + +A V ++ +G + Y ++ G + EA L EM+
Sbjct: 274 YQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMI 333
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL----LHSGSD 233
+K P T++ +I C+ EA +L + + +A ++ ++ LH +D
Sbjct: 334 QKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTD 393
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 97/196 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ V+ ++ MI L + +AL + ++M + GI D++ Y ++ G+ EG+ K
Sbjct: 371 GYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKA 430
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +++L+ GL P V ++ I LCK + A++++ M +P T + ++
Sbjct: 431 TNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIG 490
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + GD ++ + +M ++ N+ T+ ++D L + + + ++L+ M ++ +
Sbjct: 491 LSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREGYRLE 550
Query: 185 SSTFDNIICCMCQKGL 200
S +++ +K
Sbjct: 551 KSRICSLVTKFSKKNF 566
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 120/218 (55%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + +I L KE+ +A + ++M I P VV ++ ++ G G + LF+
Sbjct: 194 VVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFN 253
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EM++ + P+VYT+N+ ++ LCK+ K+ EA ++ M+K G KP++VT +L+ C
Sbjct: 254 EMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVN 313
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++KAK + M +GV N+H Y ++++GL I EA +EM K P + T+
Sbjct: 314 EVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYS 373
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ A EL+ ++ + + +LL
Sbjct: 374 SLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLL 411
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 132/232 (56%), Gaps = 5/232 (2%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P ++ T ++ LV E AL+ N M Q G+ P+V CY++V++G+
Sbjct: 290 MVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALF--NTMVQRGVMPNVHCYSVVINGLCKN 347
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ + F EM +IP+ TY+ I+GLCK ++ A +++D M G NV+T
Sbjct: 348 KLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITF 407
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++LL ALC+ + KA ++K++ + ++ N++TY I++DGL + + +A ++ +++
Sbjct: 408 SSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFI 467
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
K + T++ +I +C +GL++EAL L+ K+ P A +E +++H+
Sbjct: 468 KGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFE-IIVHA 518
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 113/224 (50%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L +++ + DVV Y ++ + E +
Sbjct: 153 LGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTE 212
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ EM+ + P V T++ I G C + +A ++ + M+ PNV T N L+
Sbjct: 213 AYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILVD 272
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +AK V+ M +GV+ ++ T+ ++DG E+ +A L M+++ P
Sbjct: 273 ALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMP 332
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ LI+EA++ K++ +K P + +L+
Sbjct: 333 NVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLI 376
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 114/214 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V ++ +I L K + +A+ +M+ I P+ V Y+ ++ G+ G
Sbjct: 325 MVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGR 384
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G +V T++ ++ LCK VD+AI++V + +PN+ T N
Sbjct: 385 ISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNI 444
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +KG L + TY IM++GL + + EA LL +M
Sbjct: 445 LIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNG 504
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + TF+ I+ + + +A +L+++++A+
Sbjct: 505 CIPNAVTFEIIVHALFKNDENEKAEKLLREMIAR 538
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P +++F ++ LVK A+ + Q++ +GI P +V + IV++ +
Sbjct: 50 PSIIEFNKILGSLVKSNNKHYPTAISLFYQLELNGITPSIVTFNIVINCYCHLSEMNFAF 109
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L ++L +G PD+ T I G+C KV EA+ D +I LG + V+ TL+ L
Sbjct: 110 SLLGKILKVGFHPDIVTLTTLIKGMCLNGKVKEALHFHDHVISLGFHLDQVSYGTLINGL 169
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G+ A +++++ K V ++ Y ++D L + + EA L EM+ K P
Sbjct: 170 CKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTV 229
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++I C G +A L ++V K+ P + L+
Sbjct: 230 VTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPNVYTFNILV 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ F +I A +L ++ + G PD+V T ++ G+ G +
Sbjct: 84 GITPSIVTFNIVINCYCHLSEMNFAFSLLGKILKVGFHPDIVTLTTLIKGMCLNGKVKEA 143
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVDS 105
D ++ LG D +Y INGLCK + A+Q I+DS
Sbjct: 144 LHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDS 203
Query: 106 ----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
MI P VVT ++L+ C G A + EM LK + N
Sbjct: 204 LCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINPN 263
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
++T+ I++D L + ++ EA +L M+K+ P T +++ C +N+A L
Sbjct: 264 VYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFN 323
Query: 210 KIVAKSFAPGARAWEALL 227
+V + P + ++
Sbjct: 324 TMVQRGVMPNVHCYSVVI 341
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ F+ ++ L K A+ ++ ++K I+P++ Y I++ G+ +G
Sbjct: 395 MHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGR 454
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++ + G V+TYN+ INGLC + +DEA+ ++ M GC PN VT
Sbjct: 455 LKDAQVIFQDLFIKGYNLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEI 514
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL + + KA+ +++EM +G+
Sbjct: 515 IVHALFKNDENEKAEKLLREMIARGL 540
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD--LSKAKGVMKEMGLKGVELNLH 151
N VD + + ++ + P+++ N +LG+L ++ + A + ++ L G+ ++
Sbjct: 31 NNVDNVVSSFNHILHMNPTPSIIEFNKILGSLVKSNNKHYPTAISLFYQLELNGITPSIV 90
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
T+ I+++ +E+ A LL ++LK F+P T +I MC G + EAL +
Sbjct: 91 TFNIVINCYCHLSEMNFAFSLLGKILKVGFHPDIVTLTTLIKGMCLNGKVKEALHFHDHV 150
Query: 212 VAKSFAPGARAWEALL 227
++ F ++ L+
Sbjct: 151 ISLGFHLDQVSYGTLI 166
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K + +A + ++M +GI PDVV Y+ ++SG G +L
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M++ + PDVYT+N+ ++G CK K+ E + M+K G KPNVVT +L+ C
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KA + M GV + +Y IM++G ++ EA L ++M K P T
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I+ AL+L+ ++ + P + ++L
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 395
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 8/229 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ K+ + + + M + GIKP+VV Y ++ G K + +
Sbjct: 246 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSI 305
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ PD +YN+ ING CK KVDEA+ + M PNVVT +L+ LC+
Sbjct: 306 FNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCK 365
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL--------EEMLKK 179
+G +S A ++ EM +GV ++ TY +LD L ++ +A LL E++ K
Sbjct: 366 SGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVK 425
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ + +I C KGL NEAL L+ K+ P A+ +E ++L
Sbjct: 426 GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIIL 474
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + MI K ++ +A+ + +M I P+VV YT ++ G+ G
Sbjct: 309 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 368
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G+ PD+ TY+ ++ LCK ++VD+AI +
Sbjct: 369 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL------------------ 410
Query: 121 LLGALCEAGDLSKAKG-VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+K K V +++ +KG L+++ Y +M+ G K EA LL +M
Sbjct: 411 ----------LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDN 460
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++A+
Sbjct: 461 GRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 495
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 13/233 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +F ++ LVK A+ + QM+ GI ++V I+++ G +
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117
Query: 68 FDEMLVLGLIPDVYT-------------YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
F +L G P+V T Y INGLCK + A+Q++ + +PN
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
VV NT++ ++C+ +++A + EM +G+ ++ TY ++ G ++ +A L
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+M+ + P TF+ ++ C+ G + E + ++ + P + +L+
Sbjct: 238 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL--- 64
P V+ +T +I L K + AL ++++M G+ PD++ Y+ +L + K
Sbjct: 351 PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 410
Query: 65 -----DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
D++F+++ V G DVY Y V I G C + +EA+ ++ M G P+ T
Sbjct: 411 LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYE 470
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + A+ +++EM +G+
Sbjct: 471 IIILSLFKKDENDMAEKLLREMIARGL 497
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+ Q P + + +L +V Y L +M + G+ ++ T N+ IN + +
Sbjct: 51 LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+ + +++K G PNV+T TL+ LC LK +Y
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLC----------------LKV------SYGT 148
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+++GL + A LL + K P ++ II MC+ L+NEA +L ++V++
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208
Query: 216 FAPGARAWEALL 227
+P + AL+
Sbjct: 209 ISPDVVTYSALI 220
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K + +A + ++M +GI PDVV Y+ ++SG G +L
Sbjct: 40 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 99
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M++ + PDVYT+N+ ++G CK K+ E + M+K G KPNVVT +L+ C
Sbjct: 100 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 159
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KA + M GV + +Y IM++G ++ EA L ++M K P T
Sbjct: 160 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 219
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I+ AL+L+ ++ + P + ++L
Sbjct: 220 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 259
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 8/229 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ K+ + + + M + GIKP+VV Y ++ G K + +
Sbjct: 110 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSI 169
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ PD +YN+ ING CK KVDEA+ + M PNVVT +L+ LC+
Sbjct: 170 FNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCK 229
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL--------EEMLKK 179
+G +S A ++ EM +GV ++ TY +LD L ++ +A LL E++ K
Sbjct: 230 SGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVK 289
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ + +I C KGL NEAL L+ K+ P A+ +E ++L
Sbjct: 290 GYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIIL 338
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + MI K ++ +A+ + +M I P+VV YT ++ G+ G
Sbjct: 173 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 232
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G+ PD+ TY+ ++ LCK ++VD+AI +
Sbjct: 233 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL------------------ 274
Query: 121 LLGALCEAGDLSKAKG-VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+K K V +++ +KG L+++ Y +M+ G K EA LL +M
Sbjct: 275 ----------LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDN 324
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++A+
Sbjct: 325 GRIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 77/154 (50%)
Query: 74 LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSK 133
+G D +Y INGLCK + A+Q++ + +PNVV NT++ ++C+ +++
Sbjct: 1 MGFHLDQVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNE 60
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A + EM +G+ ++ TY ++ G ++ +A L +M+ + P TF+ ++
Sbjct: 61 AFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 120
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+ G + E + ++ + P + +L+
Sbjct: 121 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 154
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL--- 64
P V+ +T +I L K + AL ++++M G+ PD++ Y+ +L + K
Sbjct: 215 PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 274
Query: 65 -----DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
D++F+++ V G DVY Y V I G C + +EA+ ++ M G P+ T
Sbjct: 275 LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYE 334
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + A+ +++EM +G+
Sbjct: 335 IIILSLFKKDENDMAEKLLREMIARGL 361
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + MI KE + +A +L M ++ +++ Y V++G+ +G
Sbjct: 220 METKGCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANLISYNAVINGLCGQGR 279
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+ +EM + GL PD TYN +NG CK +A+ ++ M G PNVVT T
Sbjct: 280 MNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTT 339
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +C+ +LS+A ++ M +G+ N TY ++DG + + EA +L EM+
Sbjct: 340 LINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSG 399
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P T++ ++ C G + EA+ ++K +V + P ++ ++
Sbjct: 400 FVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVI 446
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 122/232 (52%), Gaps = 9/232 (3%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQ-------MKQDGIKPDVVCYTIVLSGI 55
+ GF PGV+ + ++ +++ G +L + Q M ++ + P++ Y +++ G+
Sbjct: 147 RHGFSPGVLSYNSILDSIIRS--GPHSLLSIQQANRVFCDMVRNNVSPNIYTYNVMIRGM 204
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
V+ G + +EM G +P+V TYN I+G CK+NK+DEA ++ M + N+
Sbjct: 205 VSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANL 264
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
++ N ++ LC G +++ V++EM LKG+ + TY +++G +A +LL E
Sbjct: 265 ISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHE 324
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M K P T+ +I MC+ ++ A+E++ + + +P R + L+
Sbjct: 325 MSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLV 376
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 120/223 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ +T +I + K + A+ IL+ M+ G+ P+ YT ++ G +G +
Sbjct: 329 GLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEA 388
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ EM+ G +P V TYN +NG C +V+EA+ ++ M++ G P+VV+ +T++
Sbjct: 389 YKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISL 448
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G+L KA + EM K + + TY ++ GL + ++ EA L +EML + P
Sbjct: 449 FCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPD 508
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++ C +G +++AL+L +++ K F P + L+
Sbjct: 509 EVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLI 551
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 120/223 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ K+ AL +L++M G+ P+VV YT +++G+ + +
Sbjct: 294 GLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRA 353
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ M GL P+ TY ++G C+Q ++EA +++ M+ G P+VVT N L+
Sbjct: 354 MEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNG 413
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G + +A GV+K+M +G+ ++ +Y ++ E+G+A + EM++K P
Sbjct: 414 FCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPD 473
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ ++I +C + ++EA +L ++++ + +P + L+
Sbjct: 474 AVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLM 516
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V+ + ++ R +A+ +L M + G+ PDVV Y+ V+S G+ K
Sbjct: 399 GFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKA 458
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ EM+ ++PD TY+ I GLC Q K+ EA + M+ G P+ VT TL+
Sbjct: 459 FQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNG 518
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G+LSKA + EM KG ++ TY ++++GL KA EA LL ++ P
Sbjct: 519 YCVEGELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVPN 578
Query: 185 SSTFDNII--CC-------------MCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
T++ +I C C KGL++EA + + + ++F P + L++H
Sbjct: 579 DVTYETLIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYN-LIIH 637
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 113/218 (51%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
++ + +I L + R + + ++ +M G+ PD V Y +++G +G++ + L
Sbjct: 264 LISYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLH 323
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EM GL P+V TY ING+CK + A++I+ M G PN T TL+ C G
Sbjct: 324 EMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQG 383
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++A V+ EM G ++ TY +++G + EA +L++M+++ +P ++
Sbjct: 384 LMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYS 443
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C+ G + +A ++ ++V K P A + +L+
Sbjct: 444 TVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLI 481
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P +T ++ ++ +A +L++M G P VV Y +++G G
Sbjct: 360 MRDRGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGR 419
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +M+ GL PDV +Y+ I+ C+ ++ +A Q+ M++ P+ VT ++
Sbjct: 420 VEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSS 479
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC LS+A + +EM +G+ + TY +++G + E+ +A L +EM++K
Sbjct: 480 LIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKG 539
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P T+ +I + +K EA +L+ K+ P +E L+
Sbjct: 540 FLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVPNDVTYETLI 586
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ ++ +I + A + +M + I PD V Y+ ++ G+ +
Sbjct: 430 MVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRK 489
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +LF EML GL PD TY +NG C + ++ +A+ + D M++ G P+VVT +
Sbjct: 490 LSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSV 549
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG---KAEIG---------- 167
L+ L + +AK ++ ++ N TY +++ G K+ +G
Sbjct: 550 LINGLNKKARTREAKKLLLKLFYDESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMKGL 609
Query: 168 --EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
EA + E M ++ F P + ++ II C+ G + +A + ++V F
Sbjct: 610 MDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNMYTEMVHCGF 660
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 50/261 (19%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ +I+ L + + +A + +M G+ PD V YT +++G EG+ K +L
Sbjct: 472 PDAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDL 531
Query: 68 FDEMLVLGLIPDVYTYNVYINGL------------------------------------- 90
DEM+ G +PDV TY+V INGL
Sbjct: 532 HDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLKLFYDESVPNDVTYETLIENCSG 591
Query: 91 -------------CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
C + +DEA ++ ++M + KP+ N ++ C G++ KA +
Sbjct: 592 NEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGNVRKAYNM 651
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
EM G ++ T ++ L + E S +++ +L C + ++ +
Sbjct: 652 YTEMVHCGFVSHMVTVIALIKALSKEGMNDELSSVMQNILNSCTLNDAELSKALVRINFK 711
Query: 198 KGLINEALELMKKIVAKSFAP 218
+G ++ L L+ ++ P
Sbjct: 712 EGHMDVVLNLLTEMANNGLLP 732
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 124/229 (54%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ ++ ++ LV E ++ I N M G+ + Y+I+++G
Sbjct: 293 MMKQGIKPDVVTYSSLMDGYCLVNEVNKAES--IFNTMSHRGVTANAKSYSIMINGFCKI 350
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ +LF EM + PDV TY+ I+GLCK ++ A+Q+VD M G PN+VT
Sbjct: 351 KMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTY 410
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N++L ALC+ + KA ++ + +G++ +++TY I++DGL + +A + E++L
Sbjct: 411 NSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDLLV 470
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + +T+ +I C GL++E+L L+ K+ P A +E ++
Sbjct: 471 KGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIPDAVTYEIII 519
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K++ DA + ++M I P+VV Y+ ++SG G +
Sbjct: 206 PDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDF 265
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M+ + ++G CK+ +V EA ++ M+K G KP+VVT ++L+ C
Sbjct: 266 FNKMIF-----------ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCL 314
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KA+ + M +GV N +Y IM++G + EA L +EM K +P T
Sbjct: 315 VNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 374
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ G I+ AL+L+ ++ + AP + ++L
Sbjct: 375 YSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSIL 414
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ MI K + +A+ + +M I PDV+ Y+ ++ G+ G
Sbjct: 328 MSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDGLCKSGR 387
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L D+M G+ P++ TYN ++ LCK ++VD+AI ++ G +P+V T
Sbjct: 388 ISYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTI 447
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +KG + ++TY +M+ G + E+ LL +M +
Sbjct: 448 LIDGLCKGGRLKDARNIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENG 507
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ IIC + K ++A +L+++++ +
Sbjct: 508 CIPDAVTYEIIICSLFDKDKNDKAEKLLREMITR 541
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P ++ + +LS +V Y + L +M + G+ D+ T ++ IN C+ + A +
Sbjct: 66 PHIIQFNKILSSLVKLNQYPTVVSLHPQMELNGIASDLVTCSILINSFCQLGHIPFAFSV 125
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+ ++K G +P+ +T TL+ LC GD+ +A ++ G L+ +Y +++GL
Sbjct: 126 LAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCK 185
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
E A LL K P ++ II MC+ +N+A +L ++VAK +P
Sbjct: 186 VGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVT 245
Query: 223 WEALL 227
+ AL+
Sbjct: 246 YSALI 250
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F ++ LVK + + + QM+ +GI D+V +I+++ G +
Sbjct: 66 PHIIQFNKILSSLVKLNQYPTVVSLHPQMELNGIASDLVTCSILINSFCQLGHIPFAFSV 125
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++L G PD T+ I GLC + + +A+ D +I +G + V+ TL+ LC+
Sbjct: 126 LAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGFHLDQVSYGTLINGLCK 185
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ K V+ ++ Y ++DG+ + +A L EM+ K P T
Sbjct: 186 VGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVT 245
Query: 188 FDNIICCMCQKGLINEALELMKK---IVAKSFAPGARAWEA 225
+ +I C G + +A + K I+ F R EA
Sbjct: 246 YSALISGFCIVGKLKDAFDFFNKMIFILVDGFCKEGRVKEA 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K + A+ +L + K GI+P V YTI++ G+ G
Sbjct: 398 MHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGR 457
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G V TY V I G C +DE++ ++ M + GC P+ VT
Sbjct: 458 LKDARNIFEDLLVKGYNITVNTYTVMIQGFCSHGLLDESLALLSKMEENGCIPDAVTYEI 517
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + KA+ +++EM +G+
Sbjct: 518 IICSLFDKDKNDKAEKLLREMITRGL 543
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 116/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I +E + A ++ MK +G P+V Y+ ++ G+ G +
Sbjct: 307 PDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGV 366
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM GL PD TY IN + ++DEAI+++ M + C+ + VT N +LG LC
Sbjct: 367 LAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCR 426
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A +++++ +GV LN +YRI+L+ L E+ +A+ LL ML + F P +T
Sbjct: 427 EGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYAT 486
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +C++G+ N+A + +V F P +WE L+
Sbjct: 487 SNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLI 526
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 2/212 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK-PDVVCYTIVLSGIVAEGD 60
R L + P V F ++++ + A ++ +M+ P+V+ Y+ ++ G+ G
Sbjct: 229 RSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGR 288
Query: 61 YVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ELF+EM+ ++PD TYNV ING C++ K D A +++ M GC PNV +
Sbjct: 289 LKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYS 348
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC+AG L AKGV+ EM G++ + TY +++ +I EA LL EM +
Sbjct: 349 ALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKEN 408
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+ TF+ I+ +C++G +EAL++++K+
Sbjct: 409 DCQADTVTFNVILGGLCREGRFDEALDMIEKL 440
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 121/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K + +A + ++M GI PDVV Y+ ++SG G L
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M+ + PDVYT+++ ++G CK+ +V EA ++ M+K G KP+VVT +L+ C
Sbjct: 254 FNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCL 313
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M GV N+ +Y IM++G ++ EA L +EM K P T
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G I+ AL+L+ ++ + + ++L
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 120/228 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + ++ ++ A I N M Q G+ +V Y I+++G
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF EM +IPDV TYN I+GLCK K+ A+++VD M G + +T N+
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L ALC+ + KA ++ +M +G++ +++TY I++DGL + +A + E++L K
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ T+ +I C L ++AL L+ K+ P A+ +E ++L
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIIL 519
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F+ ++ KE R +A +L M + GIKPDVV Y ++ G K +
Sbjct: 264 PDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSI 323
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ +V +YN+ ING CK KVDEA+ + M P+VVT N+L+ LC+
Sbjct: 324 FNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCK 383
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM +GV + TY +LD L ++ +A LL +M + P T
Sbjct: 384 SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYT 443
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ G + +A + + ++ K + + ++
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMI 483
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 111/214 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V + MI K ++ +A+ + +M I PDVV Y ++ G+ G
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G+ D TYN ++ LCK ++VD+AI ++ M G +P++ T
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +KG + ++TY +M+ G +A LL +M
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K + A +L+++++A+
Sbjct: 507 CIPNAKTYEIIILSLFEKDENDMAEKLLREMIAR 540
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ ++ +I + DA+ + N+M + I PDV ++I++ G EG
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + M+ G+ PDV TY ++G C +V++A I ++M + G NV + N
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ + +A + KEM K + ++ TY ++DGL +I A L++EM +
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSE 238
T+++I+ +C+ +++A+ L+ K+ + P + L+ L G L ++
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Query: 239 TTFAGL 244
F L
Sbjct: 462 NIFEDL 467
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +F ++ LVK A+ + +M+ +GI D+V + I+++ G +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +L G P+ T I GLC + ++ +A+ D ++ LG N V TL+ LC+
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G S A +++ + K V+ N+ Y ++D + + EA L EM+ K P T
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C G +N+A+ L K++++ P + L+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 2/205 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P + + +L +V Y L EM G+ D+ T+N+ IN + + +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+++K G +PN +T TL+ LC G + +A ++ G LN Y +++GL
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
+ A LL + K P ++ II MC+ L+NEA +L ++V+K +P
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 223 WEALLLHSGSDLTYSETTFAGLFNQ 247
+ AL+ SG + GLFN+
Sbjct: 234 YSALI--SGFCILGKLNDAIGLFNK 256
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 96/190 (50%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
+ G +P+ + T ++ G+ +G + D+++ LG + Y INGLCK +
Sbjct: 119 KKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTS 178
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
A+Q++ + +PNVV NT++ ++C+ +++A + EM KG+ ++ TY ++
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
G ++ +A L +M+ + P TF ++ C++G + EA ++ ++ +
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298
Query: 218 PGARAWEALL 227
P + +L+
Sbjct: 299 PDVVTYCSLM 308
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + ++ L K + A+ +L +MK +GI+PD+ YTI++ G+ G
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G VYTY V I G C + D+A+ ++ M GC PN T
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM +G+
Sbjct: 517 IILSLFEKDENDMAEKLLREMIARGL 542
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
LVK+ +L+ N M Q G+ PDV Y+I+++G + +LF+EM + P+
Sbjct: 315 LVKQVNKAKSLF--NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPN 372
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
V TYN ++GLCK + A+++VD M G N++T N++L A+C+ + KA ++
Sbjct: 373 VVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLT 432
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
++ KG++ ++ TY ++++GL + +A + E++L K + P T+ ++I C KG
Sbjct: 433 KIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKG 492
Query: 200 LINEALELMKKIVAKSFAPGARAWEALLLHS 230
+E L ++ K+ P A +E +L+HS
Sbjct: 493 FFDEGLAMLSKMKDNGCIPNAITYE-ILIHS 522
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 120/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + K++ DA + +M I PDVV Y+ ++SG G +L
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDL 255
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ + P+VYT+++ I+G CK+ KV EA ++ M+K K +VVT N+L+ C
Sbjct: 256 FNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M +GV ++ +Y IM++G + EA L EEM K +P T
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++++ +C+ G + ALEL+ ++ + + ++L
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 119/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F+ +I KE + +A +L M + +K DVV Y ++ G K L
Sbjct: 266 PNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSL 325
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ PDV++Y++ ING CK VDEA+++ + M PNVVT N+L+ LC+
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCK 385
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G S A ++ EM +G N+ TY +LD + + +A +LL ++ +K P T
Sbjct: 386 SGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ G +++A ++ + ++ K ++P + +L+
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V ++ MI K + +A+ + +M I P+VV Y ++ G+ G
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G ++ TYN ++ +CK N VD+AI ++ + + G +P++ T
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG N++TY +++G K E +L +M
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ +I + +K ++A +L+++++A+
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 112/223 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L + A+ +L ++ ++P+VV Y+ ++ + +
Sbjct: 158 GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDA 217
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L+ EM+ + PDV TY+ I+G C K+ A+ + + MI PNV T + L+
Sbjct: 218 FDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + +AK V+ M K V+L++ TY ++DG ++ +A L M ++ P
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD 337
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ +++EA++L +++ K P + +L+
Sbjct: 338 VWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 109/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++F ++ L+K ++ AL + QM+ +GIKPD + ++++ G +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L G PD T+ + I GLC + +V +A+ D ++ G + + V+ TL+ LC
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + K V N+ Y ++D + + +A L EM+ K P T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I C G + A++L ++++ + P + L+
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 81/146 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ + ++ + K A+ +L ++K+ GI+PD+ YT++++G+ G
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+++LV G P++YTY ING C + DE + ++ M GC PN +T
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEI 518
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ +L E + KA+ +++EM +G+
Sbjct: 519 LIHSLFEKDENDKAEKLLREMIARGL 544
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 35/234 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ + ++ + G PD V +TI++ G+ +G+ K D+++ G D +Y IN
Sbjct: 112 SFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLIN 171
Query: 89 GLCKQNKVDEAIQ-------------------IVDSMIK---------LGCK-------P 113
GLC+ + A+Q I+DSM K L C+ P
Sbjct: 172 GLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISP 231
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
+VVT ++L+ C G L A + M + N++T+ I++DG + ++ EA +L
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL 291
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M+KK T+++++ C +N+A L + + P ++ ++
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMI 345
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 70/151 (46%)
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 136
IP + + L K + A+ + M G KP+ +TCN L+ + G + +
Sbjct: 55 IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114
Query: 137 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
V ++ KG + T+ I++ GL K E+ +A ++++ + F ++ +I +C
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174
Query: 197 QKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G A++L++++ K P + ++
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTII 205
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 122/222 (54%), Gaps = 4/222 (1%)
Query: 8 PGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P ++ ++ ++ FLVKE A ++ N + G+ P+V Y I+++G+ +
Sbjct: 297 PDIVTYSSLMDGYFLVKEVN--KAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAA 354
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
LF EM + PD +YN I+GLCK ++ + ++ M +G NV+T N+LL AL
Sbjct: 355 NLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDAL 414
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ + KA ++K++ +G++ N++TY I++DGL + +A + ++L K +
Sbjct: 415 CKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNV 474
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
S ++ ++ C++GL +EAL L+ K+ P A ++ L+
Sbjct: 475 SMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLI 516
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 112/201 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L K++ D + ++M + I P+V+ Y ++ G G + L
Sbjct: 192 PDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGL 251
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++M + + PDV T+ ++GLCKQ +V +A ++ MIK +P++VT ++L+
Sbjct: 252 LNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFL 311
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK + + L+GV N+ +Y IM++GL + EA+ L +EM P + +
Sbjct: 312 VKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVS 371
Query: 188 FDNIICCMCQKGLINEALELM 208
++++I +C+ G I++ +L+
Sbjct: 372 YNSLIDGLCKSGRISDVWDLL 392
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + MI L K + +A + +M + PD V Y ++ G+ G +
Sbjct: 329 GVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDV 388
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L EM +G +V TYN ++ LCK ++VD+AI ++ + G +PN+ T L+
Sbjct: 389 WDLLVEMHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDG 448
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A+ + ++ KG LN+ Y +M++ + EA LL +M P
Sbjct: 449 LCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPN 508
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T+ +IC + + ++A++L+++++ +
Sbjct: 509 AITYQTLICALFENNKNDKAVKLLREMIVR 538
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 115/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L ++K +KPDVV Y ++ + +
Sbjct: 154 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDG 213
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L+ EM+V + P+V TYN I G ++ EA+ +++ M P+V+T TL+
Sbjct: 214 YDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDG 273
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G++ KA+ V+ M + VE ++ TY ++DG E+ +A L + + P
Sbjct: 274 LCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPN 333
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ +I +C+ ++NEA L K++ + + P ++ +L+
Sbjct: 334 VFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLI 376
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + T +I L + ALY + + G + V Y I+++G+ G+
Sbjct: 117 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 176
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L +++ L + PDV YN I+ LCK V + + MI PNV+T NTL+
Sbjct: 177 AALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLI 236
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G + +A G++ +M +K + ++ T+ ++DGL + E+ +A +L M+K+
Sbjct: 237 YGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVE 296
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +++ +N+A L + + P ++ ++
Sbjct: 297 PDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMI 341
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + +I + A IL ++ + G +P+ V T +++G+ G K
Sbjct: 84 GIQPNIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 143
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D ++ G + +Y + INGLCK + A+Q+++ + L KP+VV NT++ A
Sbjct: 144 LYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDA 203
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ +S + EM + + N+ TY ++ G ++ EA LL +M K P
Sbjct: 204 LCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPD 263
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++ +C++G + +A ++ ++ + P + +L+
Sbjct: 264 VLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLM 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 28 DALYILNQ-MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
DA+ N+ + + P + + +L +V + +M + G+ P++ T ++
Sbjct: 36 DAVSSFNRILHMNNPTPPIFEFGKILGSLVKMNHFSTAISFSHQMELKGIQPNIVTLSIL 95
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
IN C N+++ A I+ ++KLG +PN VT TL+ LC G + KA + KG
Sbjct: 96 INSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGF 155
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
LN +Y I+++GL E A LLE++ P ++ II +C+ L+++ +
Sbjct: 156 HLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPDVVMYNTIIDALCKDKLVSDGYD 215
Query: 207 LMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
L +++ P + L+ G + GL NQ
Sbjct: 216 LYSEMIVNKIHPNVITYNTLIY--GFSILGQMKEAVGLLNQ 254
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G V+ + ++ L K + A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 395 MHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGR 454
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++ ++L G +V YNV +N CK+ DEA+ ++ M GC PN +T T
Sbjct: 455 LEDAQEIYHDLLTKGYPLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQT 514
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ AL E KA +++EM ++G+
Sbjct: 515 LICALFENNKNDKAVKLLREMIVRGL 540
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L K R D +L +M G +V+ Y +L +
Sbjct: 360 MHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDALCKNHQ 419
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ G+ P++YTY + ++GLCK ++++A +I ++ G NV N
Sbjct: 420 VDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNV 479
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ C+ G +A ++ +M G N TY+ ++ L + +A LL EM+ +
Sbjct: 480 MVNEFCKEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENNKNDKAVKLLREMIVR 538
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V FT +I L K ++A + ++M G +P++V T ++ G +G+
Sbjct: 251 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 310
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
ELFD + G DV+TYNV+I+G CK +V +A+++ D M + G PN+VT N+
Sbjct: 311 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 370
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+AG++S A ++K M G+ ++ T I+LDGL + +A LL ++++
Sbjct: 371 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 430
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ +I C + EA+ L++ + K+ P + L+
Sbjct: 431 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 477
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 120/236 (50%), Gaps = 3/236 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ + +I L K A I+ M + G+ PD+V I+L G+
Sbjct: 356 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 415
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF++++ GL PDV++Y + I+G C ++ EA+ ++ M P++VT +
Sbjct: 416 LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSC 475
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC +G +S A ++ EM +KG + TY I+LD L K + EA L +M+K+
Sbjct: 476 LIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 535
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 233
P + +I C+ I+EA+ L +++ K+ P + L + SGS+
Sbjct: 536 LEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSN 591
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 101/185 (54%)
Query: 34 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 93
N+M +G+ P+ Y ++ G+ G +++ L DEM+ GL VY + V I+GLCK
Sbjct: 214 NEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKN 273
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
+ EA ++ D M+ G +PN+VTC L+G C G++ A+ + +G G + ++ TY
Sbjct: 274 GMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTY 333
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+ + G + +A + +EM ++ P T++++I C+C+ G ++ A E++K +
Sbjct: 334 NVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHR 393
Query: 214 KSFAP 218
P
Sbjct: 394 SGLTP 398
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 112/216 (51%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ GF V + I K R DA+ + ++M ++G+ P++V Y ++ + G+
Sbjct: 323 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 382
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
E+ M GL PD+ T + ++GLCK ++D+AI + + +++ G P+V + L+
Sbjct: 383 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 442
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C + + +A ++++M LK + ++ TY ++DGL I A LL EM K
Sbjct: 443 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 502
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P + T+ ++ + +K ++EA+ L +++ + P
Sbjct: 503 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP 538
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ I ++ + G D V VL G+ G +K E DE++ G + +Y + IN
Sbjct: 96 SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 155
Query: 89 GLCKQNKVDEAIQIVDSMIK--------LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
GLC+ +V+EA+ ++ + K K NVV + ++ LC G + + E
Sbjct: 156 GLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNE 215
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
M GV N TY ++ GL G + E L++EM+++ F +I +C+ G+
Sbjct: 216 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 275
Query: 201 INEALELMKKIVAKSFAPGARAWEALL 227
+ EA E+ ++V + + P AL+
Sbjct: 276 LVEAREMFDEMVNRGYEPNIVTCTALM 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ ++ +I L + R +A +LN+M G PD + Y+I+L + + + L
Sbjct: 468 PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFL 527
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M+ GL PDV Y + I+G CK ++DEAI + M P++VT L A+ +
Sbjct: 528 FNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 587
Query: 128 AGDLS 132
+G S
Sbjct: 588 SGSNS 592
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + ++ ++ L K++ +A+++ NQM + G++PDV+CYTI++ G
Sbjct: 496 MHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSER 555
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF EM + L+PD+ TY + N + K + V+ + + P V+
Sbjct: 556 IDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVL---K 612
Query: 121 LLGALCEAGDL 131
L ALC++ L
Sbjct: 613 YLAALCKSEHL 623
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 35/256 (13%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP + F +I K+E A +M++ G+KP++V Y +++G+ G + +
Sbjct: 270 CPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID 329
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L+D+M+ LGL P++ TYN ING CK+ + EA +++D + K PNV+T NT++ A C
Sbjct: 330 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYC 389
Query: 127 EAG-----------------------------------DLSKAKGVMKEMGLKGVELNLH 151
+ G DL AK ++ EM KG++ ++
Sbjct: 390 KEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY I++DGL + A LL EM P T++ ++ C +G + AL + K++
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRM 509
Query: 212 VAKSFAPGARAWEALL 227
+ P + L+
Sbjct: 510 EKERKQPNVVTYNVLI 525
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P V+ F MI KE + + + M ++GI P+V Y +++G+ + D
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQ 430
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
EL +EM GL DV TYN+ I+GLCK +K A ++++ M LG KPN VT NTL+
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G L A V K M + + N+ TY +++ G ++ A+ LL EML+K
Sbjct: 491 DGYCMEGKLKAALNVRKRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Query: 183 PRSSTFDNIICCMCQKGL 200
P +T+D + M +KG
Sbjct: 551 PNRTTYDIVRLEMLEKGF 568
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL---DELFDEMLVLGLIPDVYTYNVYING 89
+ MK GI P VV Y ++ G G K+ + EML + P+ T+N I+G
Sbjct: 223 IEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK V A + + M K G KPN+VT N+L+ LC G L +A + +M G++ N
Sbjct: 283 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ TY +++G K + EA+ +L+++ K+ P TF+ +I C++G++ E L
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P ++ L+
Sbjct: 403 SMLEEGILPNVSTYKCLI 420
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG-----MDALYILNQMKQDGIKPDVVCYTIVLSGI 55
M+ G P V+ + ++ K RG A + +M + I P+ V + ++ G
Sbjct: 226 MKAWGISPKVVTYNTLVDGYCK--RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ + + F+EM GL P++ TYN INGLC K++EAI + D M+ LG KPN+
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
VT N L+ C+ + +A V+ ++ + + N+ T+ M+D + + E L
Sbjct: 344 VTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
ML++ P ST+ +I +C+K + A EL+ ++ K
Sbjct: 404 MLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENK 442
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + K G K +LS +V E ++ ++ EM+ + ++ T+N++IN
Sbjct: 149 AYEAFTRAKDYGFKLSQTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE---AGDLSKAKGVMKEMGLKG 145
GLC+ K+++A ++ M G P VVT NTL+ C+ AG + KA+ MKEM
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N T+ ++DG + A EEM K+ P T++++I +C G + EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+L K+V P + AL+
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALI 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ LVKE + D Y+ +M + I ++ + I ++G+ G K
Sbjct: 160 GFKLSQTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQ---NKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
++ ++M G+ P V TYN ++G CK+ K+ +A + M+ PN VT NTL
Sbjct: 220 EDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL 279
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C+ +++ AK +EM +G++ N+ TY +++GL ++ EA L ++M+
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+K ++ EA +++ + + P + ++
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMI 385
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 122/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I L K++ +DA + +QM I PDV+ Y ++ G + G + L
Sbjct: 117 PNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGL 176
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++ML+ + PD+YT+N+ ++GLCK+ ++ +A ++ MIK P+V+T N+L+
Sbjct: 177 FNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFL 236
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+KA V M +GV ++H+Y +M++GL + EA LL+EM K P + T
Sbjct: 237 VKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVT 296
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I + + G I +A +L+ ++ + + +LL
Sbjct: 297 YSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLL 336
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F ++ L KE A +L M + + PDV+ Y ++ G K +
Sbjct: 187 PDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFV 246
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ PDV++Y+V INGLCK VDEA+ ++ M PN VT ++L+ L +
Sbjct: 247 FNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHK 306
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G + A ++ EM +G ++ TY +LD L ++ +A LL ++ + P T
Sbjct: 307 SGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYT 366
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
+ ++ +C+ G + +A E+ + ++ K + + +AL L S
Sbjct: 367 YTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLS 409
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 118/223 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K A+ +L + ++P+VV Y+ ++ + + +
Sbjct: 79 GFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDA 138
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L+ +ML+ + PDV TYN + G ++ EA+ + + M+ KP++ T N L+
Sbjct: 139 FDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDG 198
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G++ KA+ V+ M + V+ ++ TY ++DG + +A+ + M ++ P
Sbjct: 199 LCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 258
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ +++EA+ L+K++ +KS AP + +L+
Sbjct: 259 VHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 123/237 (51%), Gaps = 25/237 (10%)
Query: 1 MRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K P V+ + ++ FLVK+E A ++ N M + G+ PDV Y+++++G+
Sbjct: 215 MIKQSVDPDVITYNSLMDGYFLVKQENK--ATFVFNTMARRGVTPDVHSYSVMINGLCKT 272
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ L EM + P+ TY+ I+GL K ++ +A +V+ M G +V+T
Sbjct: 273 KMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITY 332
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N+LL ALC+ + KA ++ ++ +G++ +++TY I++DGL + +A + + +L
Sbjct: 333 NSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLI 392
Query: 179 KCFY---------------------PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
K ++ P TF+ +I + + + ++A+EL+++++A+
Sbjct: 393 KGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS-----GIVAEGDYV 62
P + +F + LVK + + +QM+ GI+ D+V I+++ G V D V
Sbjct: 6 PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65
Query: 63 KLDELF-DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
K F D+++ G + +Y I+GLCK + A+Q++ ++ L +PNVV +T+
Sbjct: 66 KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ +LC+ + A + +M LK + ++ TY ++ G + + EA L +ML K
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTF 241
P TF+ ++ +C++G + +A ++ ++ +S P + +L+ G L E
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLM--DGYFLVKQENKA 243
Query: 242 AGLFN 246
+FN
Sbjct: 244 TFVFN 248
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + ++ +I L K R DA ++N+M G DV+ Y +L +
Sbjct: 285 MHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQ 344
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV---------------------DEA 99
K L ++ G+ PD+YTY + ++GLCK ++ D+A
Sbjct: 345 VDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKA 404
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ ++ M GC PN VT L+ AL E KA +++EM +G+
Sbjct: 405 LSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 120/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T MI +E++ A +L++MK+ G+ P+ YT ++ G G++ + +L
Sbjct: 302 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 361
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M G P+V TYN +NGLCK+ +V EA ++++ + G KP+ T N L+ C+
Sbjct: 362 MNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCK 421
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++ +A + +M G++ ++H+Y ++ + + E+ + EE ++ P + T
Sbjct: 422 QANIRQALVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRT 481
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++IC C++G + A++ ++ AP + + A++
Sbjct: 482 YTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAII 521
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF FT +I ++ AL+ ++ G++P+++ +T ++ G+ G
Sbjct: 189 MLERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGS 248
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL-GCKPNVVTCN 119
+ E+ +EM+ G P+VYT+ I+GLCK+ ++A ++ +++ KPNV+T
Sbjct: 249 IKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 308
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ C L++A+ ++ M +G+ N +TY ++DG A L+ M +
Sbjct: 309 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 368
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P T++ I+ +C++G + EA ++++ P + L+
Sbjct: 369 GFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILM 416
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G+ P V T +I L K+ A + L ++ + KP+V+ YT ++SG E +
Sbjct: 263 GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNR 322
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ L M GL+P+ TY I+G CK + A +++ M G PNV T N ++
Sbjct: 323 AEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVN 382
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G + +A ++++ G++ + TY I++ +A I +A +L +M+K P
Sbjct: 383 GLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQP 442
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C++ + E+ ++ V P R + +++
Sbjct: 443 DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMI 486
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + M+ K ++A L+ M + G D +T+++S +G +
Sbjct: 158 GVQPDSVSYRVMVVMYCKIGNILEADRWLSAMLERGFVVDNATFTLIISRFCEKGYATRA 217
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F ++ +GL P++ + I GLCK+ + +A ++++ M+ G KPNV T +L+
Sbjct: 218 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 277
Query: 125 LCEAGDLSKA-KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G KA + +K + + + N+ TY M+ G + ++ A +LL M ++ P
Sbjct: 278 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 337
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++T+ +I C+ G A +LM + ++ F+P + A++
Sbjct: 338 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIV 381
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P +T +I K A ++N M +G P+V Y +++G+ G
Sbjct: 330 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGR 389
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ ++ GL PD +TYN+ ++ CKQ + +A+ + + M+K G +P++ + T
Sbjct: 390 VQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTT 449
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + +++ +E G+ TY M+ G + + A +
Sbjct: 450 LIAVFCRENRMKESEMFFEEAVRIGIIPTNRTYTSMICGYCREGNLTLAMKFFHRLSDHG 509
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P S T+ II +C++ ++EA L ++ K P
Sbjct: 510 CAPDSITYGAIISGLCKQSKLDEARGLYDSMIEKGLVP 547
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 106/205 (51%), Gaps = 3/205 (1%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL-FDEMLVLGLIPDVYTY 83
R +A+ ++ +M G+ P+ +++ + +E V+ EL F+EM V G+ PD +Y
Sbjct: 108 RLKEAVEMVIEMHNQGLVPNTRTLNLIIK-VTSEMGLVEYAELLFEEMCVRGVQPDSVSY 166
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
V + CK + EA + + +M++ G + T ++ CE G ++A + +
Sbjct: 167 RVMVVMYCKIGNILEADRWLSAMLERGFVVDNATFTLIISRFCEKGYATRALWYFRRLVD 226
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G+E NL + M++GL + I +A +LEEM+ K + P T ++I +C+KG +
Sbjct: 227 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEK 286
Query: 204 ALELMKKIV-AKSFAPGARAWEALL 227
A L K+V +++ P + A++
Sbjct: 287 AFRLFLKLVRSENHKPNVLTYTAMI 311
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 19 FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
FLVK+E A ++ N M + G+ PDV Y+I+++G+ + LF EM + P
Sbjct: 320 FLVKQEN--KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAP 377
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
+ TYN I+GL K ++ +A +V+ M G +V+T ++LL ALC+ + KA ++
Sbjct: 378 NTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLI 437
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
++ +G++ N++TY I++DGL + +A + +++L K ++ ++ ++ +C++
Sbjct: 438 TKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKE 497
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
GL +EAL L+ K+ P A +E L+
Sbjct: 498 GLFDEALSLVSKMEDNGCIPDAVTYETLV 526
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 121/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L K++ + A + ++M I PDVV YT ++ G + G + L
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++ML+ + PDVYT+N+ ++GLCK+ ++ +A ++ MIK G N+VT N+L+
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+KA V M +GV ++ +Y IM++GL + EA L +EM K P + T
Sbjct: 322 VKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVT 381
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I + + G I++A +L+ ++ + + +LL
Sbjct: 382 YNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLL 421
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 116/223 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L ++ ++P+VV Y ++ + + +
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L EM+V + PDV TY I G ++ EA+ + + M+ KP+V T N L+
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G++ KA+ V+ M +GV+ N+ TY ++DG + +A+ + M ++ P
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 343
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ +++EA+ L K++ +KS AP + +L+
Sbjct: 344 VQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLI 386
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 118/220 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V ++ MI L K + +A+ + +M + P+ V Y ++ G++ G
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L +EM G DV TY+ ++ LCK ++VD+AI ++ + G +PN+ T
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG L++ Y +M++GL + EA L+ +M
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
P + T++ ++ + + ++A++L+++++ + A G+
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGS 554
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ +F ++ LVK A+ QM+ I+PD+ + I+++ G +
Sbjct: 64 IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
++ LG PD T I GLC KV EA+ D +I G + V+ TL+ LC+ G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A V++++ V+ N+ Y ++D L + AS L EM+ K +P T+
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I G + EA+ L +++ K+ P + L+
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L ++ + G PD V T ++ G+ G + D+++ G D +Y IN
Sbjct: 118 AFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLIN 177
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+Q++ + L +PNVV NT++ +LC+ + A + EM +K +
Sbjct: 178 GLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFP 237
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G + + EA L +ML K P TF+ ++ +C++G + +A ++
Sbjct: 238 DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297
Query: 209 KKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFN 246
++ + + +L+ G L E +FN
Sbjct: 298 AVMIKQGVDSNIVTYNSLM--DGYFLVKQENKATFVFN 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 28 DALYILNQM--KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
DA+ N + ++ ++P + + +LS +V + +M + + PD++T+N+
Sbjct: 46 DAVSSFNHILHMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI 104
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
IN C ++ A ++ + KLG P+ VT TL+ LC G + +A ++ KG
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L+ +Y +++GL E A +L ++ P ++ II +C+ L+ A
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHAS 224
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
+L +++ K P + L+ G + GLFNQ
Sbjct: 225 DLCSEMIVKRIFPDVVTYTTLIY--GCLIVGRLKEAVGLFNQ 264
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L+K R DA ++N+M G DV+ Y+ +L +
Sbjct: 370 MHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQ 429
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ G+ P++YTY + ++GLCK ++ +A + ++ G +V N
Sbjct: 430 VDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ G +A ++ +M G + TY ++ L + +A LL EM+ +
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Query: 181 FYPRSSTFDNIICCMCQ 197
S+ N + C+ Q
Sbjct: 550 SAVGSNISSNSMLCVYQ 566
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 113/211 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I + K++ DA + ++M I PDV Y +++G G L
Sbjct: 239 PNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGL 298
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + PDVYT+N+ ++ CK+ +V EA + M+K G KP+VVT N+L+ C
Sbjct: 299 FNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCL 358
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK + M +GV N+ +Y IM++ + +A L +EM K +P T
Sbjct: 359 VNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVIT 418
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ ++I +C+ G I+ ALEL ++ + P
Sbjct: 419 YSSLIDGLCKSGRISYALELNDEMHDRGQQP 449
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 16/236 (6%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ KE R +A L M + GIKPDVV Y ++ + K +
Sbjct: 309 PDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSI 368
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ +V +Y++ IN CK VD+A+++ M PNV+T ++L+ LC+
Sbjct: 369 FNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCK 428
Query: 128 AGDLSKAKGVMKEMGLK----------------GVELNLHTYRIMLDGLVGKAEIGEASL 171
+G +S A + EM + G+ N+ TY I++DGL + +A
Sbjct: 429 SGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARN 488
Query: 172 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ E++L K + +T+ +I C KGL +EA+ L+ K+ P A +E ++
Sbjct: 489 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIII 544
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V ++ MI K + A+ + +M I P+V+ Y+ ++ G+ G
Sbjct: 372 MSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGR 431
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G PD+ T L +Q K G +PN+ T
Sbjct: 432 ISYALELNDEMHDRGQQPDIIT-------LTRQLK------------DQGIRPNMFTYTI 472
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +KG + ++TY +M+ G K EA LL +M C
Sbjct: 473 LIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNC 532
Query: 181 FYPRSSTFDNII 192
P + T++ II
Sbjct: 533 CIPNAVTYEIII 544
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 23 EERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
+RG D + + Q+K GI+P++ YTI++ G+ G +F+++LV G V
Sbjct: 443 HDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITV 502
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 136
TY V I+G C + DEA+ ++ M C PN VT ++ +L + + KA+
Sbjct: 503 NTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAEN 558
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 124/230 (53%), Gaps = 6/230 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ ++ ++ A ++ + M + G+ P Y I+++G+ G
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL---GK 351
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+DE LF EM G+ PD TYN I+GLCK ++ A Q+VD M G +++T
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N+L+ LC+ + KA ++K++ +G++ +++TY I++DGL + A + +++L
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + + T++ +I +C++GL NEA L+ K+ P A +E ++
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETII 521
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P + MI L K + +AL + +M GI PD V Y ++ G+ G
Sbjct: 330 MSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGR 389
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G+ D+ TYN I+ LCK + +D+AI +V + G +P++ T N
Sbjct: 390 ISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNI 449
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG +N TY IM++GL + EA +LL +M
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNG 509
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + +K +A +L+++++ +
Sbjct: 510 IIPDAVTYETIIRALFRKDENEKAEKLLREMIIR 543
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 116/218 (53%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + +I L K++ DA + ++M I PDVV + ++ G G + LF
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EM++ + PDVYT+++ ++ LCK + A ++ M+K G P+VVT ++L+ C
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++KAK V M GV + H+Y IM++GL + EA L +EM K P + T++
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ A +L+ ++ + +L+
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M ++ P +++F ++ +VK A+ + +Q++ GI P +V + I+++
Sbjct: 48 MLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHL 107
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G+ +F ++L LG P T+N ING+C K+ EA+ D +I LG + V+
Sbjct: 108 GEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSY 167
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
TL+ LC+ G+ A ++K++ K V ++ Y I+++ L + +A L EM+
Sbjct: 168 RTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMIT 227
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P TF+++I C G + EA L ++V K+ P + L+
Sbjct: 228 KRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 115/224 (51%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L +++ + DVV Y I+++ + +
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+L+ EM+ + PDV T+N I G C ++ EA + M+ P+V T + L+
Sbjct: 218 AYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G++++AK ++ M +GV ++ TY ++DG E+ +A + M + P
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++ +I + + +++EAL L K++ K AP + +L+
Sbjct: 338 HAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLI 381
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ F ++ A I ++ + G P + + +++GI G +
Sbjct: 89 GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEA 148
Query: 65 DELFDEMLVLGLIPDVYTYNVYING----------------------------------- 89
D ++ LG D +Y ING
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
LCK V +A Q+ MI P+VVT N+L+ C G L +A G+ EM LK + +
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPD 268
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
++T+ I++D L I A +L M+K+ P T+ +++ C +N+A +
Sbjct: 269 VYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFS 328
Query: 210 KIVAKSFAPGARAWEALL 227
+ AP A ++ ++
Sbjct: 329 TMSRLGVAPHAHSYNIMI 346
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ + +I L K A+ ++ ++K GI+P + Y I++ G+ G
Sbjct: 400 MHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGR 459
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F ++L+ G + +TYN+ INGLCK+ +EA ++ M G P+ VT T
Sbjct: 460 LKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYET 519
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
++ AL + KA+ +++EM ++G+ L H
Sbjct: 520 IIRALFRKDENEKAEKLLREMIIRGLLLCKH 550
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD--LSKAKGVMKEMGLKGVELNLHTY 153
V+ + M+++ P++V N +LG++ +A + + A + ++ LKG+ + T+
Sbjct: 38 VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTF 97
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
I+++ E+ A + ++LK ++P + TF+ +I +C G + EAL ++A
Sbjct: 98 NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157
Query: 214 KSFAPGARAWEALL 227
F ++ L+
Sbjct: 158 LGFHLDQVSYRTLI 171
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++G P + MI K + +AL + N M+ GI PD V Y ++ G+ G
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G +++TYN I+ LCK + VD+AI +V + G +P++ T N
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ KG +N TY IM++GL + EA LL +M
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ +I + K +A +L+++++A+
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 120/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ ++ ++ + A ++LN + Q G P+ Y +++G
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF++M G+ PD TYN I+GLCK ++ A ++VD M G N+ T N
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ + +A ++K++ +G++ +++T+ I++ GL + A + +++L K
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + T++ ++ +C++GL +EA L+ K+ P A +E L+
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ + +I L K + +DA + +QM I PDVV ++ ++ G G + LF
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
EM++ + PD YT+N+ ++ LCK+ + A ++ M+K G PNVVT ++L+ C
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
++KAK V+ + G N H+Y M++G + EA L +M K P T+
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386
Query: 189 DNIICCMCQKGLINEALELMKKI 211
+++I +C+ G I+ A EL+ ++
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEM 409
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F ++ L KE A +L M ++G+ P+VV Y+ ++ G K +
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + +G P+ ++Y ING CK VDEA+ + + M G P+ VT N+L+ LC+
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK 395
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM G N+ TY ++D L + +A L++++ + P T
Sbjct: 396 SGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYT 455
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ +I +C+ G + A ++ + +++K ++ A + ++
Sbjct: 456 FNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMV 495
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + +I L K AL +L ++ +K +VV Y ++ + +
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ +M+ + PDV T++ I G C +++EA + M+ P+ T N L+
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G+L AK ++ M +GV N+ TY ++DG ++ +A +L + + P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I C+ +++EAL L + K AP + +L+
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 2/221 (0%)
Query: 9 GVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
+++F ++ LVK A+ + +++ GI PD+ + I+++ +
Sbjct: 65 SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ ++L +G PD T+N I GLC KV EA+ D ++ LG + + TL+ LC
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ G+ A +++++ K V++N+ Y ++D L + +A L +M+ K P
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF +I C G + EA L +++V K+ P + L+
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + F +I A ++ ++ + G +PD + + ++ G+ G +
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVDS 105
D +L LG D ++Y INGLCK + A+Q I+DS
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
Query: 106 ----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
MI P+VVT + L+ C G L +A G+ +EM LK + +
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+T+ I++D L + + A +L M+K+ P T+ +++ C +N+A ++
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLN 337
Query: 210 KIVAKSFAPGARAW 223
I AP A ++
Sbjct: 338 TISQMGAAPNAHSY 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K A+ ++ ++K GI+PD+ + I++ G+ G
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR 468
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F ++L G + +TYN+ +NGLCK+ DEA ++ M G P+ VT T
Sbjct: 469 LKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYET 528
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ AL + KA+ +++EM +G+
Sbjct: 529 LIQALFHKDENEKAEKLLREMIARGL 554
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++G P + MI K + +AL + N M+ GI PD V Y ++ G+ G
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G +++TYN I+ LCK + VD+AI +V + G +P++ T N
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ KG +N TY IM++GL + EA LL +M
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ +I + K +A +L+++++A+
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 120/227 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ ++ ++ + A ++LN + Q G P+ Y +++G
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF++M G+ PD TYN I+GLCK ++ A ++VD M G N+ T N
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ + +A ++K++ +G++ +++T+ I++ GL + A + +++L K
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + T++ ++ +C++GL +EA L+ K+ P A +E L+
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ + +I L K + +DA + +QM I PDVV ++ ++ G G + LF
Sbjct: 207 NVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF 266
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
EM++ + PD YT+N+ ++ LCK+ + A ++ M+K G PNVVT ++L+ C
Sbjct: 267 REMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLV 326
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
++KAK V+ + G N H+Y M++G + EA L +M K P T+
Sbjct: 327 NQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTY 386
Query: 189 DNIICCMCQKGLINEALELMKKI 211
+++I +C+ G I+ A EL+ ++
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEM 409
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F ++ L KE A +L M ++G+ P+VV Y+ ++ G K +
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + +G P+ ++Y ING CK VDEA+ + + M G P+ VT N+L+ LC+
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK 395
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM G N+ TY ++D L + +A L++++ + P T
Sbjct: 396 SGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYT 455
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ +I +C+ G + A ++ + +++K ++ A + ++
Sbjct: 456 FNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMV 495
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + +I L K AL +L ++ +K +VV Y ++ + +
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ +M+ + PDV T++ I G C +++EA + M+ P+ T N L+
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G+L AK ++ M +GV N+ TY ++DG ++ +A +L + + P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I C+ +++EAL L + K AP + +L+
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 2/221 (0%)
Query: 9 GVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
+++F ++ LVK A+ + +++ GI PD+ + I+++ +
Sbjct: 65 SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ ++L +G PD T+N I GLC KV EA+ D ++ LG + + TL+ LC
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ G+ A +++++ K V++N+ Y ++D L + +A L +M+ K P
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF +I C G + EA L +++V K+ P + L+
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 35/254 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + F +I A ++ ++ + G +PD + + ++ G+ G +
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVDS 105
D +L LG D ++Y INGLCK + A+Q I+DS
Sbjct: 158 LHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
Query: 106 ----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
MI P+VVT + L+ C G L +A G+ +EM LK + +
Sbjct: 218 LCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPD 277
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+T+ I++D L + + A +L M+K+ P T+ +++ C +N+A ++
Sbjct: 278 YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLN 337
Query: 210 KIVAKSFAPGARAW 223
I AP A ++
Sbjct: 338 TISQMGAAPNAHSY 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K A+ ++ ++K GI+PD+ + I++ G+ G
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR 468
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F ++L G + +TYN+ +NGLCK+ DEA ++ M G P+ VT T
Sbjct: 469 LKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYET 528
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ AL + KA+ +++EM +G+
Sbjct: 529 LIQALFHKDENEKAEKLLREMIARGL 554
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 1/211 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F+ +I L K+ R +A + +K +PDV+ YT ++ G GD
Sbjct: 204 MEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKH-KFEPDVIVYTSLVHGWCRAGD 262
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +E+F +M G+ P+VYTY++ I+ LC+ ++ A + MI GC PN VT N+
Sbjct: 263 IAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 322
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +AG K V +M G + +Y +++ + EA +L+ M+KK
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P +STF++I C+ + +N A + K+
Sbjct: 383 VAPNASTFNSIFGCIAELHDVNGAHRMYAKM 413
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P V ++ +I L + + A + ++M G P+ V + ++ V G
Sbjct: 273 MKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGR 332
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K+ +++++M LG D +YN I CK +DEA++++D+M+K G PN T N+
Sbjct: 333 TEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNS 392
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ G + E D++ A + +M N TY I++ I L +EM +
Sbjct: 393 IFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESE 452
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV-AKSFAPGARAWEALL 227
P +T+ +I C+KG N A LMK++V K P +E +L
Sbjct: 453 VEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVL 500
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GF + +MI L + R D A ++++ MK G++ V +++++ V G +
Sbjct: 138 GFPSSPEPYNEMID-LAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAE 196
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
F+ M G PD ++++ I+ LCK+ + EA DS+ K +P+V+ +L+
Sbjct: 197 AVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSL-KHKFEPDVIVYTSLVH 255
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C AGD++KA+ V +M GV+ N++TY I++D L +I A + EM+ P
Sbjct: 256 GWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDP 315
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKI 211
+ TF++++ + G + L++ ++
Sbjct: 316 NAVTFNSLMRVHVKAGRTEKVLQVYNQM 343
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P ++ +I L E R +AL +L +M+ G + V Y ++ G+
Sbjct: 403 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 462
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+E+FD+M +LG+ TYN I+GLCK +V+EA Q++D MI G KP+ T N+
Sbjct: 463 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 522
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL C GD+ KA +++ M G E ++ TY ++ GL + AS LL + K
Sbjct: 523 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 582
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ +I + + E + L ++++ KS P A
Sbjct: 583 IVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDA 622
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 119/223 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V F +I+ L K + A+ +L +M G+KPD + +T ++ G + EGD
Sbjct: 162 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 221
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ +ML G + + V +NG CK+ +V+EA++ V + + G P+ VT N+L+
Sbjct: 222 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNG 281
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G+++ A ++ M KG + +++TY ++ G+ E +A +L++M+ + P
Sbjct: 282 FCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPN 341
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T++ +I +C++ I A +L + +V+K P + L+
Sbjct: 342 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 384
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
KE R +AL + ++ ++G PD V + +++G G+ ++ D M+ G PDVY
Sbjct: 249 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 308
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TYN I+G+CK + ++AI+I+ MI C PN VT NTL+ ALC+ ++ A + + +
Sbjct: 309 TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARIL 368
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
KG+ ++ T+ ++ GL A + EEM K P T+ +I +C + +
Sbjct: 369 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 428
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
EAL L+K++ + A A + L+
Sbjct: 429 KEALMLLKEMESSGCARNAVVYNTLI 454
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I L K R DA I +QM+ G+ V Y ++ G+ + +L D+M+
Sbjct: 450 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 509
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ GL PD +TYN + C+ +++A IV +M GC+P++ T TL+G LC AG +
Sbjct: 510 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 569
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A +++ + +KG+ L H Y ++ L + E L EM++K P + T +
Sbjct: 570 VASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVF 629
Query: 193 CCMCQ-KGLINEALELMKKIVAKSFAP 218
+C G I EA++ +++ K P
Sbjct: 630 RGLCNGGGPIQEAIDFTVEMLEKGILP 656
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I L KE A + + G+ PDV + ++ G+ + E+
Sbjct: 340 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 399
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM G PD +TY++ I+ LC + ++ EA+ ++ M GC N V NTL+ LC+
Sbjct: 400 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 459
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ + A+ + +M L GV + TY ++DGL + EAS L+++M+ + P T
Sbjct: 460 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 519
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++++ C+ G I +A ++++ + + P + L+
Sbjct: 520 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 559
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V + +I + K A+ IL QM P+ V Y ++S + E +
Sbjct: 302 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 361
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L ++ GL+PDV T+N I GLC D A+++ + M GCKP+ T + L+ +
Sbjct: 362 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 421
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC L +A ++KEM G N Y ++DGL I +A + ++M
Sbjct: 422 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 481
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
S T++ +I +C+ + EA +LM +++ + P + +LL +
Sbjct: 482 SVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTY 526
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 109/207 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + F ++ + DAL I++ M + G PDV Y ++SG+ G++ K
Sbjct: 267 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKA 326
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ +M++ P+ TYN I+ LCK+N+++ A + ++ G P+V T NTL+
Sbjct: 327 IEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQG 386
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC + + A + +EM KG + + TY I++D L + + EA +LL+EM
Sbjct: 387 LCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARN 446
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
+ ++ +I +C+ I +A E+ ++
Sbjct: 447 AVVYNTLIDGLCKSRRIEDAEEIFDQM 473
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G P F +I+ + L IL + G KPD Y I L+ +V +
Sbjct: 90 LKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNK 147
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ L +M+ G++ DV T+NV I LCK +++ AI +++ M G KP+ +T T
Sbjct: 148 LKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTT 207
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ E GDL+ A + K+M G L + +++++G + + EA + E+ ++
Sbjct: 208 LMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEG 267
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P TF++++ C+ G +N+AL+++ ++ K F P + +L+
Sbjct: 268 FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLI 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V F +I+ L + A+ + +MK G KPD Y+I++ + E +
Sbjct: 372 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 431
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L EM G + YN I+GLCK ++++A +I D M LG + VT NTL+
Sbjct: 432 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 491
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ + +A +M +M ++G++ + TY +L +I +A +++ M P
Sbjct: 492 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 551
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I +C+ G ++ A +L++ + K A+ ++
Sbjct: 552 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVI 594
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 122/222 (54%), Gaps = 2/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I K++ +DA + ++M I P+VV + ++ G G + + L
Sbjct: 193 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGL 252
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM++ P+VYT+N+ ++GLCK+ +V A ++ MIK +P+VVT N+L+
Sbjct: 253 FNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFL 312
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KA V + +GV N+ +Y +M++GL + EA +L +EM K P + T
Sbjct: 313 VKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTIT 372
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFA--PGARAWEALL 227
++++I +C+ G I++ L+ ++ K P + L+
Sbjct: 373 YNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSILI 414
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 2/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ L KE A +L M + ++PDVV Y ++ G + K +
Sbjct: 263 PNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYV 322
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD + G+ P+V +Y+V INGLCK VDEA+ + M PN +T N+L+ LC+
Sbjct: 323 FDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCK 382
Query: 128 AGDLSKAKGVMKEMGLK--GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+G +S ++ EM +K GV+ +++TY I++D L I +A L++EM +
Sbjct: 383 SGRISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANV 442
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++I +C+ +++A+ L K+ P + L+
Sbjct: 443 VTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILI 484
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 120/226 (53%), Gaps = 5/226 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG---IKPDVVCYTIVLSGIVAEGDY 61
GF + + +I L K AL +L ++ +G ++PDV+ YT ++ +
Sbjct: 154 GFYLNEVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLV 211
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ +L+ EM+V + P+V T+N I G C + +EA+ + + MI PNV T N L
Sbjct: 212 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNIL 271
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ LC+ G++ +AK V+ M + VE ++ TY ++DG E+ +A+ + + + ++
Sbjct: 272 VDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGV 331
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ +I +C+ +++EA+ L K++ +KS P + +L+
Sbjct: 332 TPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLI 377
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ + G P V ++ MI L K + +A+ + +M + P+ + Y ++ G+ G
Sbjct: 326 LARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGR 385
Query: 61 YVKLDELFDEMLV--LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ L DEM + LG+ PDVYTY++ I+ LCK ++ +A ++D M G NVVT
Sbjct: 386 ISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTY 445
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
+L+ LC+ +L KA + +M GVE N++TY I++D L I +A
Sbjct: 446 TSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADA 496
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 14/205 (6%)
Query: 8 PGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL- 64
P V+ + ++ FLVKE A Y+ + + + G+ P+V Y+++++G+ VK+
Sbjct: 298 PDVVTYNSLMDGYFLVKEVN--KATYVFDTLARRGVTPNVRSYSVMINGLCK----VKMV 351
Query: 65 DE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IK-LGCKPNVVTCN 119
DE LF EM L P+ TYN I+GLCK ++ + ++D M IK LG KP+V T +
Sbjct: 352 DEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYS 411
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC++G ++ A ++ EM +G N+ TY ++DGL + +A L +M
Sbjct: 412 ILIDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDL 471
Query: 180 CFYPRSSTFDNIICCMCQKGLINEA 204
P T++ +I +C+ G I +A
Sbjct: 472 GVEPNVYTYNILIDRLCKSGRIADA 496
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 36/235 (15%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A IL ++ + G +P+ V T ++ G+ G+ K ++++ G + +Y IN
Sbjct: 108 AFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLIN 167
Query: 89 GLCKQNKVDEAIQ--------------------IVDS----------------MIKLGCK 112
GLCK + A+Q I+DS MI
Sbjct: 168 GLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIY 227
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
PNVVT N+L+ C G +A G+ EM LK N++T+ I++DGL + E+ A +
Sbjct: 228 PNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSV 287
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L M+K+ P T+++++ +N+A + + + P R++ ++
Sbjct: 288 LTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMI 342
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ +F ++ L K A+ QM+ GI+PD+ +I+++ G +
Sbjct: 54 IFEFNKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQLGQINFAFSILG 113
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
++L LG P+ T I GLC +V +A+ + +I G N V+ TL+ LC++G
Sbjct: 114 KILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCKSG 173
Query: 130 DLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+ A +++++ GL V ++ Y ++D + +A L EM+ K YP TF
Sbjct: 174 ETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTF 233
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I C G EA+ L +++ K+ P + L+
Sbjct: 234 NSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILV 272
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ +L + ++ +N ++ L K N + AI M G +P++ T + L+ C+
Sbjct: 42 FNRILNINPTQPIFEFNKILSSLAKLNHFNIAISFSQQMELKGIQPDIFTLSILINCFCQ 101
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++ A ++ ++ G E N T ++ GL E+ +A +++ K FY +
Sbjct: 102 LGQINFAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVS 161
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
+ +I +C+ G AL+L++KI
Sbjct: 162 YGTLINGLCKSGETRAALQLLRKI 185
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 35/256 (13%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP + F +I K+E A +M++ G+KP++V Y +++G+ G + +
Sbjct: 270 CPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID 329
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L+D+M+ LGL P++ TYN ING CK+ + EA ++ D + K PNV+T NT++ A C
Sbjct: 330 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYC 389
Query: 127 EAG-----------------------------------DLSKAKGVMKEMGLKGVELNLH 151
+ G DL AK ++ EM KG++ ++
Sbjct: 390 KEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY I++DGL + A LL EM P T++ ++ C +G + AL + ++
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 509
Query: 212 VAKSFAPGARAWEALL 227
+ P + L+
Sbjct: 510 EKERKQPNVVTYNVLI 525
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 102/198 (51%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P V+ F MI KE + + + M +GI P+V Y +++G+ + D
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
EL +EM GL DV TYN+ I+GLCK +K A ++++ M LG KPN VT NTL+
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G L A V M + + N+ TY +++ G ++ A+ LL EML+K
Sbjct: 491 DGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Query: 183 PRSSTFDNIICCMCQKGL 200
P +T+D + M +KG
Sbjct: 551 PNRTTYDIVRLEMLEKGF 568
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG-----MDALYILNQMKQDGIKPDVVCYTIVLSGI 55
M+ G P V+ + ++ K RG A + +M + I P+ V + ++ G
Sbjct: 226 MKAWGISPNVVTYNTLVDGYCK--RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ + + F+EM GL P++ TYN INGLC K++EAI + D M+ LG KPN+
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
VT N L+ C+ + +A V ++ + + N+ T+ M+D + + E L
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
ML + P ST++ +I +C+K + A EL+ ++ K
Sbjct: 404 MLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + K G K + +LS +V E ++ ++ EM+ + ++ T+N++IN
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE---AGDLSKAKGVMKEMGLKG 145
GLC+ K+++A ++ M G PNVVT NTL+ C+ AG + KA+ MKEM
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 268
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N T+ ++DG + A EEM K+ P T++++I +C G + EA+
Sbjct: 269 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 328
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+L K+V P + AL+
Sbjct: 329 DLWDKMVGLGLKPNIVTYNALI 350
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL---DELFDEMLVLGLIPDVYTYNVYING 89
+ MK GI P+VV Y ++ G G K+ + EML + P+ T+N I+G
Sbjct: 223 IEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 282
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK V A + + M K G KPN+VT N+L+ LC G L +A + +M G++ N
Sbjct: 283 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ TY +++G K + EA+ + +++ K+ P TF+ +I C++G++ E L
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + L+
Sbjct: 403 SMLDEGILPNVSTYNCLI 420
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+ GF + ++ LVKE + D Y+ +M + I ++ + I ++G+ G
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ---NKVDEAIQIVDSMIKLGCKPNVVTC 118
K ++ ++M G+ P+V TYN ++G CK+ K+ +A + M+ PN VT
Sbjct: 217 NKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTF 276
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
NTL+ C+ +++ AK +EM +G++ N+ TY +++GL ++ EA L ++M+
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG 336
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+K ++ EA ++ + + P + ++
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 385
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 124/228 (54%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIR-FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M K G P ++ + ++ + + E M A ILN M G+ V Y IV++G
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNM-AKSILNTMSHRGVTATVRSYNIVINGFCKIK 364
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +LF EM + P+V TYN I+GLCK ++ A++++D M G +P+++T +
Sbjct: 365 MVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYS 424
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++L ALC+ + KA ++ ++ +G+ N++TY I++DGL + +A + E++L K
Sbjct: 425 SILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVK 484
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +T+ +I C GL +EAL L+ K+ S P A +E ++
Sbjct: 485 GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 119/218 (54%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ ++ +I + K++ DA + ++M I ++V Y+ ++SG G LF+
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M + PDVYT+N+ ++ CK+ +V EA + M+K G KP++VT N+L+ C
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++ AK ++ M +GV + +Y I+++G + +A L +EM K +P T++
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ ALEL+ + + P + ++L
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V + +I K + A+ + +M I P+V+ Y ++ G+ G
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL D M G PD+ TY+ ++ LCK + VD+AI ++ + G +PN+ T
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +KG L ++TY +M+ G EA LL +M
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ IIC + K ++A +L+++++ +
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKLLREMITR 554
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N+M + I PDV + I++ EG + M+ G+ PD+ TYN +
Sbjct: 263 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G C N+V+ A I+++M G V + N ++ C+ + +A + KEM K +
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ TY ++DGL I A L++ M + P T+ +I+ +C+ L+++A+ L
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ K+ + P + L+
Sbjct: 443 LIKLKDQGIRPNMYTYTILI 462
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P M+F ++ LVK + L + +M+ GIKP+ V + I+++ G +
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++L +G PD T N +I G C + ++ +A+ D ++ LG + V+ TL+ LC+
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++ + K V+L++ Y ++D + + +A L EM+ + T
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C G + +A+ L K+ +++ P + L+
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 4/222 (1%)
Query: 27 MDALYILN-QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
+DA+ + N ++Q+ PD+ + +L +V Y + LF +M G+ P+ +N+
Sbjct: 52 VDAVSLFNCLLRQNPTPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
IN C+ + A ++ ++K+G +P+ +T NT + C G + +A ++ G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
L+ +Y +++GL E A LL + K + II MC+ +N+A
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
+L ++V++ + + AL+ SG + GLFN+
Sbjct: 231 DLYSEMVSRRISSNIVTYSALI--SGFCIVGKLKDAIGLFNK 270
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G V TY V I G C DEA+ ++ M C P+ +T
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + KA+ +++EM +G+
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGL 556
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%)
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
D V LF+ +L P + + L K + + M G KPN V
Sbjct: 48 NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N L+ C+ G + A V+ ++ G E + T + G K +I +A ++++
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
F+ ++ +I +C+ G ALEL++++ K
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGK 204
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 114/199 (57%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ +L + ++P+VV Y+ ++ + + + +L+ EM+ + + P+V TYN I
Sbjct: 48 AMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIY 107
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C ++ +AI +++ M+ PNVVT NTL+ LC+ G++ KA+ V+ M +GVEL
Sbjct: 108 GFCIVGQMKQAIDLLNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVEL 167
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY ++DG E+ +A+ + M+++ ++ +I +C+ +++EA+ L
Sbjct: 168 NVVTYSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLF 227
Query: 209 KKIVAKSFAPGARAWEALL 227
K++ K+ AP + +L+
Sbjct: 228 KEMHLKNMAPDIVTYNSLI 246
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 122/220 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I L K++ +DA + ++M I P+VV Y ++ G G + +L
Sbjct: 62 PNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDL 121
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EML+ + P+V T+N ++GLCK+ ++ +A +++ MIK G + NVVT + L+
Sbjct: 122 LNEMLLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFL 181
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KA V M +GV N+H+Y +M++GL + EA L +EM K P T
Sbjct: 182 VKEVNKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVT 241
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I + + G I++A +L+ ++ + + +LL
Sbjct: 242 YNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLL 281
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V +T MI L K + +A+ + +M + PD+V Y ++ G++ G
Sbjct: 195 MVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGR 254
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L +EM G DV TYN ++ LCK ++VD AI + + G +P + T
Sbjct: 255 ISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTI 314
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V + + +KG L++ Y +M++GL ++ +A LL +M
Sbjct: 315 LVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLCKESLFDKALSLLSKMKDNG 374
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P TF+ +I + + + ++A+EL++K++ +
Sbjct: 375 CTPNPVTFEILIRALFENDMNDKAVELLRKMIVRDL 410
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 112/209 (53%), Gaps = 2/209 (0%)
Query: 19 FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
FLVKE A ++ N M + G+ +V YT++++G+ + LF EM + + P
Sbjct: 180 FLVKEVN--KATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAP 237
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
D+ TYN I+GL K ++ +A +V+ M G +V+T N+LL ALC+ + A +
Sbjct: 238 DIVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLF 297
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
++ +G++ ++TY I++DGL + +A + + +L K ++ + +I +C++
Sbjct: 298 TKIKDQGIQPYIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMINGLCKE 357
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
L ++AL L+ K+ P +E L+
Sbjct: 358 SLFDKALSLLSKMKDNGCTPNPVTFEILI 386
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F ++ L KE A +L M + G++ +VV Y+ ++ G + K +
Sbjct: 132 PNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFV 191
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ G+ +V++Y V INGLCK VDEA+ + M P++VT N+L+ L +
Sbjct: 192 FNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLK 251
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +S A ++ EM +G ++ TY +LD L ++ A L ++ + P T
Sbjct: 252 YGRISDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYT 311
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +C+ G + +A E+ + ++ K + R + ++
Sbjct: 312 YTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTVMI 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC KV EA+ D +I + N V+ TL+ LC+AG+ A V++ + V+
Sbjct: 3 GLCLNGKVKEALYFHDDVIAKEFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQP 62
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ Y ++ L + +A L EM+ +P T++ +I C G + +A++L+
Sbjct: 63 NVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLL 122
Query: 209 KKIVAKSFAPGARAWEALL 227
+++ K+ +P + L+
Sbjct: 123 NEMLLKNISPNVVTFNTLV 141
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 35/256 (13%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP + F +I K+E A +M++ G+KP++V Y +++G+ G + +
Sbjct: 136 CPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID 195
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L+D+M+ LGL P++ TYN ING CK+ + EA ++ D + K PNV+T NT++ A C
Sbjct: 196 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYC 255
Query: 127 EAG-----------------------------------DLSKAKGVMKEMGLKGVELNLH 151
+ G DL AK ++ EM KG++ ++
Sbjct: 256 KEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 315
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY I++DGL + A LL EM P T++ ++ C +G + AL + ++
Sbjct: 316 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 375
Query: 212 VAKSFAPGARAWEALL 227
+ P + L+
Sbjct: 376 EKERKQPNVVTYNVLI 391
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 101/193 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F MI KE + + + M +GI P+V Y +++G+ + D EL
Sbjct: 242 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 301
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EM GL DV TYN+ I+GLCK +K A ++++ M LG KPN VT NTL+ C
Sbjct: 302 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCM 361
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L A V M + + N+ TY +++ G ++ A+ LL EML+K P +T
Sbjct: 362 EGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 421
Query: 188 FDNIICCMCQKGL 200
+D + M +KG
Sbjct: 422 YDIVRLEMLEKGF 434
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG-----MDALYILNQMKQDGIKPDVVCYTIVLSGI 55
M+ G P V+ + ++ K RG A + +M + I P+ V + ++ G
Sbjct: 92 MKAWGISPNVVTYNTLVDGYCK--RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 149
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ + + F+EM GL P++ TYN INGLC K++EAI + D M+ LG KPN+
Sbjct: 150 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 209
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
VT N L+ C+ + +A V ++ + + N+ T+ M+D + + E L
Sbjct: 210 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 269
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
ML + P ST++ +I +C+K + A EL+ ++ K + L+
Sbjct: 270 MLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 321
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL---DELFDEMLVLGLIPDVYTYNVYING 89
+ MK GI P+VV Y ++ G G K+ + EML + P+ T+N I+G
Sbjct: 89 IEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG 148
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK V A + + M K G KPN+VT N+L+ LC G L +A + +M G++ N
Sbjct: 149 FCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 208
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ TY +++G K + EA+ + +++ K+ P TF+ +I C++G++ E L
Sbjct: 209 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 268
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + L+
Sbjct: 269 SMLDEGILPNVSTYNCLI 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + K G K + +LS +V E ++ ++ EM+ + ++ T+N++IN
Sbjct: 15 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 74
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE---AGDLSKAKGVMKEMGLKG 145
GLC+ K+++A ++ M G PNVVT NTL+ C+ AG + KA+ MKEM
Sbjct: 75 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK 134
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N T+ ++DG + A EEM K+ P T++++I +C G + EA+
Sbjct: 135 ICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI 194
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+L K+V P + AL+
Sbjct: 195 DLWDKMVGLGLKPNIVTYNALI 216
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+ GF + ++ LVKE + D Y+ +M + I ++ + I ++G+ G
Sbjct: 23 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 82
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ---NKVDEAIQIVDSMIKLGCKPNVVTC 118
K ++ ++M G+ P+V TYN ++G CK+ K+ +A + M+ PN VT
Sbjct: 83 NKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTF 142
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
NTL+ C+ +++ AK +EM +G++ N+ TY +++GL ++ EA L ++M+
Sbjct: 143 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG 202
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+K ++ EA ++ + + P + ++
Sbjct: 203 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 251
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 81/152 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + +I L +++ A +LN+M+ G+K DVV Y I++ G+
Sbjct: 274 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 333
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++L +EM LGL P+ TYN ++G C + K+ A+ + M K +PNVVT N L+
Sbjct: 334 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 393
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
C+ L A G++ EM KG+ N TY I+
Sbjct: 394 YCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 425
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P ++ + +I K++ +A + + + + + P+V+ + ++ EG
Sbjct: 200 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 259
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L ML G++P+V TYN I GLC++ + A ++++ M G K +VVT N
Sbjct: 260 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 319
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ A+ ++ EM G++ N TY ++DG + ++ A + M K+
Sbjct: 320 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 379
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
P T++ +I C+ + A L+ +++ K P ++ + L
Sbjct: 380 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLE 428
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 117/214 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++G P ++ MI K + +AL + +M+ GI P+ V Y+ ++ G+ G
Sbjct: 332 ISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR 391
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL DEM V G P+++TY+ I+ LCK N +D+A+ +V + G +P++ T N
Sbjct: 392 FSCAWELVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNI 451
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ KG LN+ +Y I+++GL +A LL +M
Sbjct: 452 LIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGND 511
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + K +A +L+++++ +
Sbjct: 512 VIPDAVTYETIIHSLFYKDENEKAEKLLREMLGR 545
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ L KE A L M ++G+ PDVV Y ++ G + K L
Sbjct: 269 PDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHL 328
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +G+ P Y+Y++ ING CK +DEA+ + M G PN VT ++L+ LC+
Sbjct: 329 LSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCK 388
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G S A ++ EM + G N+ TY ++D L + +A L++++ + P T
Sbjct: 389 SGRFSCAWELVDEMHVNGQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYT 448
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G + A ++ + ++ K ++ R++ L+
Sbjct: 449 YNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNILI 488
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 124/232 (53%), Gaps = 5/232 (2%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ + ++ LV E A ++L+ + + G+ P Y+I+++G
Sbjct: 297 MMKEGVIPDVVTYNSIMDGHCLVNEVN--KAKHLLSIISRIGVAPSAYSYSIMINGFCKI 354
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF EM G+ P+ TY+ I+GLCK + A ++VD M G PN+ T
Sbjct: 355 KMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTY 414
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++L+ ALC+ L KA ++K++ +G++ +++TY I++DGL + A + +++L
Sbjct: 415 SSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLT 474
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
K + +++ +I +C+ GL ++A L+ K+ P A +E ++HS
Sbjct: 475 KGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYET-IIHS 525
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 2/228 (0%)
Query: 2 RKLGF--CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
R LG P +++F+ ++ LVK + + + Q++ +GIKP++V +I+++ G
Sbjct: 51 RMLGLNPTPSIVEFSKILGSLVKLKHYPTVISLSYQLEFNGIKPNIVSLSILINCYCHLG 110
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++ +G P+ T+N + GLC KV+EAI D ++ LG + VT
Sbjct: 111 QMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHFHDHVLALGFHLDQVTYG 170
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ LC+ G +A V++ + K V N+ Y ++D L + +A L EM+ K
Sbjct: 171 TLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSDAYELYSEMITK 230
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I C G + EA L+ ++V K+ P + L+
Sbjct: 231 KISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILV 278
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 113/219 (51%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ + +I L K++ DA + ++M I P VV ++ ++ G G + L
Sbjct: 200 NVVMYNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLV 259
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+M++ + PDVYT+N+ ++ LCK+ V A + M+K G P+VVT N+++ C
Sbjct: 260 HQMVLKNINPDVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLV 319
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+++KAK ++ + GV + ++Y IM++G I EA L EM + P + T+
Sbjct: 320 NEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTY 379
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G + A EL+ ++ P + +L+
Sbjct: 380 SSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFTYSSLI 418
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 117/242 (48%), Gaps = 2/242 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F+ +I + +A +++QM I PDV + I++ + EGD
Sbjct: 234 PTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVDALCKEGDVKGAKSF 293
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+IPDV TYN ++G C N+V++A ++ + ++G P+ + + ++ C+
Sbjct: 294 LVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCK 353
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + EM +G+ N TY ++DGL A L++EM P T
Sbjct: 354 IKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGRFSCAWELVDEMHVNGQPPNIFT 413
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLF 245
+ ++I +C+ +++A+ L+KKI + P + L+ L G L ++ F L
Sbjct: 414 YSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLL 473
Query: 246 NQ 247
+
Sbjct: 474 TK 475
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K + +AL +L +++ + +VV Y V+ + +
Sbjct: 160 LGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDSLCKDKLVSD 219
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ EM+ + P V T++ I G C ++ EA +V M+ P+V T N L+
Sbjct: 220 AYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPDVYTFNILVD 279
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ GD+ AK + M +GV ++ TY ++DG E+ +A LL + + P
Sbjct: 280 ALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAP 339
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I C+ +I+EAL L ++ + AP + +L+
Sbjct: 340 SAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLI 383
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + +I + A IL ++ + G P+ + + ++ G+ G +
Sbjct: 91 GIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEA 150
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ-------------------IVDS 105
D +L LG D TY INGLCK K EA+Q ++DS
Sbjct: 151 IHFHDHVLALGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVMYNTVIDS 210
Query: 106 ----------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
MI P VVT + L+ C G L +A G++ +M LK + +
Sbjct: 211 LCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINPD 270
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
++T+ I++D L + ++ A L M+K+ P T+++I+ C +N+A L+
Sbjct: 271 VYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAKHLLS 330
Query: 210 KIVAKSFAPGARAWEALL 227
I AP A ++ ++
Sbjct: 331 IISRIGVAPSAYSYSIMI 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 75/142 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ +I L K A+ ++ ++K GI+PD+ Y I++ G+ G
Sbjct: 406 GQPPNIFTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNA 465
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F ++L G ++ +YN+ INGLCK D+A ++ M P+ VT T++ +
Sbjct: 466 QDVFQDLLTKGYSLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYETIIHS 525
Query: 125 LCEAGDLSKAKGVMKEMGLKGV 146
L + KA+ +++EM +G+
Sbjct: 526 LFYKDENEKAEKLLREMLGRGL 547
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ML L P + ++ + L K I + + G KPN+V+ + L+ C
Sbjct: 49 FHRMLGLNPTPSIVEFSKILGSLVKLKHYPTVISLSYQLEFNGIKPNIVSLSILINCYCH 108
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + A ++ ++ G N T+ ++ GL ++ EA + +L F+ T
Sbjct: 109 LGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHFHDHVLALGFHLDQVT 168
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ +I +C+ G EAL+++++I AK
Sbjct: 169 YGTLINGLCKMGKTKEALQVLRRIEAK 195
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 60/122 (49%)
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
VD+ + M+ L P++V + +LG+L + + ++ G++ N+ +
Sbjct: 41 HVDDFVSSFHRMLGLNPTPSIVEFSKILGSLVKLKHYPTVISLSYQLEFNGIKPNIVSLS 100
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
I+++ ++ A +L ++ K ++P + TF+ ++ +C G +NEA+ ++A
Sbjct: 101 ILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEAIHFHDHVLAL 160
Query: 215 SF 216
F
Sbjct: 161 GF 162
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 127/247 (51%), Gaps = 28/247 (11%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI-----VAEGDYV 62
P + F ++ L KE + +A ++ M ++G++PDVV Y ++ G V E +V
Sbjct: 265 PDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHV 324
Query: 63 --------------------KLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
+DE LF+EM G+ PD TYN I+GLCK ++ A
Sbjct: 325 LNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCA 384
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ VD M G N+ T N+L+ ALC+ + KA ++K++ +G++ +++TY I++DG
Sbjct: 385 WEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDG 444
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L + + +A ++ +++L K + T+ +I +C KGL +EA L+ K+ P
Sbjct: 445 LCKQGRLKDAQVIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPD 504
Query: 220 ARAWEAL 226
A +E +
Sbjct: 505 AVTYEPI 511
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 105/187 (56%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + N+M+ GI PD V Y ++ G+ E DEM G+ +++TYN I
Sbjct: 348 EALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLI 407
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ LCK + VD+AI +V + G + ++ T + L+ LC+ G L A+ + +++ +KG
Sbjct: 408 DALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYN 467
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
LN+ TY IM++GL K EA+ LL +M P + T++ I + + ++A +L
Sbjct: 468 LNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPINRALFKNDENDKAEQL 527
Query: 208 MKKIVAK 214
+++++A+
Sbjct: 528 LREMIAR 534
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L K + DA + ++M I P+++ + ++ G G + LF +ML+
Sbjct: 203 IIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKN 262
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ PD+YT+N+ ++ LCK+ K+ EA ++ M+K G +P+VVT N+L+ C ++ +AK
Sbjct: 263 INPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAK 322
Query: 136 GVM----------------------------KEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
V+ EM KG+ + TY ++DGL I
Sbjct: 323 HVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCKARRIP 382
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
A ++EM T++++I +C+ +++A+ L+KKI
Sbjct: 383 CAWEFVDEMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKI 426
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 7/224 (3%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L +++ ++ DVV + ++ +
Sbjct: 156 LGFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTIIDSLCKHKFVTD 215
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ EM+ + P++ T+N I G C ++ EA + M+ P++ T N L+
Sbjct: 216 AYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNINPDIYTFNILVD 275
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G + +AK V+ M +GVE ++ TY ++DG E+ EA +L + + P
Sbjct: 276 VLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGYCLVKEVYEAKHVLNIISRMGAAP 335
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
I +C+ +I+EAL L ++ +K P + +L+
Sbjct: 336 D-------IQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLI 372
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+KL P + +I ++ A I ++ + G + D + T ++ G+ G
Sbjct: 84 KKLEIRPDIFTLNILINCYCHVQQMPFAFSIFAKILKMGFESDAITLTTLMKGLCLNGKV 143
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ D +L LG D TY INGLCK + A+ ++ + + +VV NT+
Sbjct: 144 KESLHFHDHVLALGFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESDVVMHNTI 203
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ +LC+ ++ A + EM K + N+ T+ ++ G ++ EA L +ML K
Sbjct: 204 IDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLLKNI 263
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ ++ +C++G I EA ++ ++ + P + +L+
Sbjct: 264 NPDIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLM 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K A+ ++ ++K GI+ D+ Y+I++ G+ +G
Sbjct: 391 MHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGR 450
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G +V TY++ INGLC + DEA ++ M GC P+ VT
Sbjct: 451 LKDAQVIFQDLLIKGYNLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEP 510
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
+ AL + + KA+ +++EM +G+
Sbjct: 511 INRALFKNDENDKAEQLLREMIARGL 536
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + + +I L K R A +++M +GI ++ Y ++ +
Sbjct: 356 MRSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHH 415
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ G+ D+YTY++ I+GLCKQ ++ +A I ++ G NV T +
Sbjct: 416 VDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYSI 475
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC G +A ++ +M G + TY + L E +A LL EM+ +
Sbjct: 476 MINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPINRALFKNDENDKAEQLLREMIAR 534
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 130/252 (51%), Gaps = 32/252 (12%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + FT +I L KE + +A ++ M ++G++P VV Y ++ G + + K +
Sbjct: 220 PNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNV 279
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI--------------------------- 100
F+ + + P+V++Y + INGLCK VDEA+
Sbjct: 280 FNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCEPNTVTYSSLIDALCKSGR 339
Query: 101 -----QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+++D M G N++T N+LL ALC+ + KA ++K++ +G++ N++TY I
Sbjct: 340 ISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNI 399
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++DGL + + A ++ +++L K + + T++ +I +C +GL +EA+ L++K+
Sbjct: 400 LIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNG 459
Query: 216 FAPGARAWEALL 227
P +E ++
Sbjct: 460 CTPDVVTYETII 471
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 119/219 (54%), Gaps = 3/219 (1%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ + +I L KE+ +A + +QM I P+VV + ++ G G + LF
Sbjct: 151 NVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLF 210
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
EML+ + P++YT+ + I+ LCK+ K+ EA ++ M+K G +P VVT NTL+ C
Sbjct: 211 HEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLD 270
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+++KAK V +G + + N+H+Y I+++GL + EA +EM C P + T+
Sbjct: 271 NEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEM--HC-EPNTVTY 327
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ A EL+ ++ + + +LL
Sbjct: 328 SSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLL 366
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 114/225 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + F+ +I + + + +AL+ + + G D V Y ++SG+ G+
Sbjct: 75 KLGYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLCKIGETR 134
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
++ ++ + +V YN+ I+ LCK+ V EA ++ MI PNVVT ++L+
Sbjct: 135 AALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLI 194
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G L +A G+ EM LK + N++T+ I++D L + +I EA ++ M+K+
Sbjct: 195 YGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVE 254
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C +N+A + I + P ++ ++
Sbjct: 255 PTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIII 299
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P V +T +I L K + +AL N K+ +P+ V Y+ ++ + G
Sbjct: 285 KRRMTPNVHSYTIIINGLCKIKMVDEAL---NFFKEMHCEPNTVTYSSLIDALCKSGRIS 341
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
EL D+M G ++ TYN ++ LCK ++VD+AI +V + G +PN+ T N L+
Sbjct: 342 HAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILI 401
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A+ + +++ +KG ++ + TY M++GL + EA LLE+M
Sbjct: 402 DGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCT 461
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T++ II + + ++A +L+++++ +
Sbjct: 462 PDVVTYETIIYALFKNDENDKAEKLLREMITR 493
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 113/229 (49%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M ++ P +++F ++ +VK A+ + +Q++ + I P +V I+++
Sbjct: 1 MLRMNPTPSIVEFNKILGSIVKSNNNHYTTAISLFHQLELNRITPTIVTLNILINCYGHL 60
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G+ +F ++L LG P T++ ING+C + K+ EA+ D +I LG + V+
Sbjct: 61 GEITFAFSIFAKILKLGYHPTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSY 120
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ LC+ G+ A +++++ K V N+ Y I++D L + + EA L +M+
Sbjct: 121 GALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMIL 180
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P T ++I C G + EA L +++ K+ P + L+
Sbjct: 181 KKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILI 229
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K AL +L Q++ + +VV Y I++ + E +
Sbjct: 111 LGFHLDQVSYGALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTE 170
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ +M++ + P+V T + I G C ++ EA + M+ PN+ T L+
Sbjct: 171 AYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILID 230
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +AK V+ M +GVE + TY ++DG E+ +A + + K+ P
Sbjct: 231 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTP 290
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II +C+ +++EAL K++ + P + +L+
Sbjct: 291 NVHSYTIIINGLCKIKMVDEALNFFKEMHCE---PNTVTYSSLI 331
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 82/146 (56%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ + ++ L K + A+ ++ ++K GI+P++ Y I++ G+ EG
Sbjct: 350 MHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGR 409
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G V+TYN INGLC + DEA+ +++ M GC P+VVT T
Sbjct: 410 LENAQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYET 469
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL + + KA+ +++EM +G+
Sbjct: 470 IIYALFKNDENDKAEKLLREMITRGL 495
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 114/218 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ F+ ++ + AL +MK G+ PD V YTI+++G D
Sbjct: 369 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 428
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +EM+ G + DV TYN +NGLC+ +D+A ++ M++ G P+ T T
Sbjct: 429 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 488
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G+++KA + + M L+ ++ ++ TY ++DG E+ +A L +M+ +
Sbjct: 489 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 548
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+P +F +I C GL++EA L ++ K P
Sbjct: 549 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 586
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G CP F M+ ++E +A + N+M Q G+ PD++ ++ ++ G+
Sbjct: 334 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F++M +GL+PD Y + ING C+ + V A+++ + M++ GC +VVT NT
Sbjct: 394 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 453
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL LC L A + KEM +GV + +T ++ G + +A L E M +
Sbjct: 454 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 513
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C+ G + +A EL ++++ P ++ L+
Sbjct: 514 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 560
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P T +I K+ AL + M +KPDVV Y ++ G G+
Sbjct: 474 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 533
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL+ +M+ + P ++++ ING C V EA ++ D M + G KP +VTCNT
Sbjct: 534 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 593
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ AG+LSKA + M +GV + TY +++ V + A L+ M ++
Sbjct: 594 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 653
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ I+ + G + EA ++ K++ K P + +L+
Sbjct: 654 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLI 700
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ +G P + +T +I + + AL + N+M + G DVV Y +L+G+
Sbjct: 404 MKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKM 463
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
DELF EM+ G+ PD YT I+G CK + +A+ + ++M KP+VVT NT
Sbjct: 464 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 523
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G++ KAK + +M + + + ++ I+++G + EA L +EM +K
Sbjct: 524 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 583
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T + II + G +++A + + ++++ P + L+
Sbjct: 584 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLI 630
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 94/176 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F+ +I +A + ++MK+ GIKP +V ++ G + G+ K ++
Sbjct: 551 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 610
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M+ G+ PD TYN IN K+ D A ++++M + G PN+VT N +LG
Sbjct: 611 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 670
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
G + +A+ V+ +M KG+ + TY +++G V K + EA + +EML++ F P
Sbjct: 671 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 726
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G PG+ + +I L KE A +L++M G+ P+ + +L + D +
Sbjct: 303 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 362
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +F+EML G++PD+ +++ + + ++ A+ + M +G P+ V L+
Sbjct: 363 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 422
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C D+S A + EM +G +++ TY +L+GL + +A L +EM+++ +P
Sbjct: 423 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 482
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T +I C+ G + +AL L + + +S P + L+
Sbjct: 483 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLM 525
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G V M+ L K+ + + L++M++ G+ D+V Y +++ G
Sbjct: 231 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 290
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ L D M GL P ++TYN INGLCK+ + A +++D M+ +G PN T N +L
Sbjct: 291 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 350
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C D+ +A+ V EM +GV +L ++ ++ E+G A E+M
Sbjct: 351 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 410
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + + +I C+ ++ AL++ ++V +
Sbjct: 411 PDTVIYTILINGYCRNDDVSGALKMRNEMVER 442
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD-ELF 68
V+ F +IR V+ + + +++ G + +L IV G +V L +++
Sbjct: 168 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVG-WVDLAWKVY 226
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
++ + G I +VYT N+ +N LCK K+D + M + G ++VT NTL+ A C
Sbjct: 227 EDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 286
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G +S+A G++ M KG++ L TY +++GL + A +L+EML P ++TF
Sbjct: 287 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 346
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ C+K + EA + +++ + P ++ +++
Sbjct: 347 NPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIV 385
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I VKEE A +++N M++ G+ P++V Y +L G G +
Sbjct: 618 GVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEA 677
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ + +M+ G+ PD TY ING ++ + EA ++ D M++ G P+
Sbjct: 678 EMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 727
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P ++ +I+ ++ A LN M +G+ PD + Y +++ V E +
Sbjct: 579 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 638
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L + M GL+P++ TYN + G + ++ EA ++ MI G P+ T +
Sbjct: 639 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 698
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG 145
L+ ++ +A V EM +G
Sbjct: 699 LINGYVSKDNMKEAFRVHDEMLQRG 723
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%)
Query: 45 VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD 104
VV + +++ V + E F + G + N + + K VD A ++ +
Sbjct: 168 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 227
Query: 105 SMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
+K G NV T N ++ ALC+ G L + EM KGV +L TY +++ +
Sbjct: 228 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 287
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
+ EA L++ M K P T++ +I +C++G A ++ +++ P A +
Sbjct: 288 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 347
Query: 225 ALLLHS 230
+L+ S
Sbjct: 348 PMLVES 353
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 122/231 (52%), Gaps = 4/231 (1%)
Query: 1 MRKLGFC--PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
++K+ C P + + +I L K+ + AL + +M + GI PDV YT ++ G+
Sbjct: 183 LKKMKVCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCIS 242
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
++ E F EM+ + P VYTY+ + LCK+ +V E+ ++++MIK G +P++
Sbjct: 243 DNFKAAFEFFKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDLAIF 302
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASL-LLEEM 176
NTL+ C + KAK + + +G+ ++++Y I+ GL+ + I E +L L E+M
Sbjct: 303 NTLMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGLNIPEETLPLFEDM 362
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P T++ II MC ++ A + + ++V K P A + LL
Sbjct: 363 KSKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLL 413
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + F ++ + A I + Q GI PD+ Y I+ G++++G
Sbjct: 290 MIKDGLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGL 349
Query: 61 YVKLD--ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ + LF++M + PD+ TYN I+G+C +++D A + M+ G +P+ T
Sbjct: 350 NIPEETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATY 409
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N LL ALC + +A + + +G++L+ +T+ I++D A + K
Sbjct: 410 NPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAAQATFWDAFK 469
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + + F ++ +C+ + +EA++++ K+ K P +E ++
Sbjct: 470 KGYDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKKGCTPNKAIYEVIV 518
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P + + + + L+ + + + L + MK + PD++ Y ++ G+ ++
Sbjct: 329 GITPDIYSYNILFKGLLSQGLNIPEETLPLFEDMKSKKVSPDLITYNTIIHGMC---NFS 385
Query: 63 KLDELFD---EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++D +D EM+ G+ PD TYN + LC++ K+DEAI + + + G + + T
Sbjct: 386 RMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFT 445
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ A ++G A+ + KG +L L + +ML GL EA +L +M KK
Sbjct: 446 ILIDAFWKSGRFEAAQATFWDAFKKGYDLTLAVFHVMLKGLCENHMFDEAIKILSKMKKK 505
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELM 208
P + ++ I+ + + I +A +L+
Sbjct: 506 GCTPNKAIYEVIVYALFENDEIEKATKLV 534
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P ++ + L +V + ++ + + M + + P+ +T N+ +N + K + A +
Sbjct: 53 PRIIEFNNRLHSLVMQKNFDSVVTHYRSMELNNMKPNFHTINILLNCFAQAKKANLAFSM 112
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++KLG +PN++T N+LL A+C G++ A + ++ GV L + +Y ++ GL
Sbjct: 113 FAKLLKLGYEPNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGLC- 171
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
K +A++L+ + +K C P + + II C+C+ + ALEL +++ P
Sbjct: 172 KINRHDAAMLVLKKMKVCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFT 231
Query: 223 WEALL 227
+ L+
Sbjct: 232 YTTLI 236
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G +P+++ + +L + G+ +L D++ G+ + +Y I+GLCK N+ D A
Sbjct: 120 GYEPNIITFNSLLKAMCFNGEVQMALDLHDKLKKAGVPLTIVSYGTLISGLCKINRHDAA 179
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ ++ M K+ P+ + T++ LC+ + A + EM G+ ++ TY ++ G
Sbjct: 180 MLVLKKM-KVCVPPDAIIYKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHG 238
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L A +EM+ P T+ ++ +C++ + E+ L+ ++ P
Sbjct: 239 LCISDNFKAAFEFFKEMVSNEINPTVYTYSALMAYLCKRKRVRESKALLNTMIKDGLEPD 298
Query: 220 ARAWEALL 227
+ L+
Sbjct: 299 LAIFNTLM 306
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 116/207 (56%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T +I+ L K + +AL + N+M+ GI PD V Y+ ++ G+ EL
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
D+M G DV TY +++ LCK ++VD+A+ +V + G +PN+ T N L+ LC+
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G A+ + +++ +KG ++ + TY IM++GL + EA LLE+M P T
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
++ II + + ++A +L+++++A+
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIAR 514
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 111/199 (55%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++ N + + + PDV YTI++ + + LF+EM G+ PD TY+ I+
Sbjct: 294 AKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLID 353
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK ++ A +++D M G +V+T + L ALC+ + KA ++K++ +G++
Sbjct: 354 GLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQP 413
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N++TY I++DGL + A ++ +++L K + T++ +I +C +GL +EA+ L+
Sbjct: 414 NINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLL 473
Query: 209 KKIVAKSFAPGARAWEALL 227
+K+ P +E ++
Sbjct: 474 EKMEDNGCTPDVVTYETII 492
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 84/146 (57%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ +T + L K + A+ ++ ++K GI+P++ Y I++ G+ EG
Sbjct: 371 MHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGR 430
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F ++L+ G V+TYN+ INGLC + DEA+ +++ M GC P+VVT T
Sbjct: 431 FENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYET 490
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL + + KA+ +++EM +G+
Sbjct: 491 IIRALFKNDENHKAEKLLREMIARGL 516
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD--ALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M ++ P +++F ++ LVK A+ + ++++ + I P +V + V++
Sbjct: 37 MLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHL 96
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G+ + ++L +G PD T I GLC KV EA+ D +I G + N V+
Sbjct: 97 GEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSY 156
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ LC+ G+ A V++++ K V N+ Y ++D L + + EA L +M+
Sbjct: 157 GILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIV 216
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P TF +I C G EA L ++V + P + L+
Sbjct: 217 KKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L ++ + +VV Y+ ++ + E +
Sbjct: 148 GFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEA 207
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
EL+ +M+V + PDV T++ I G C + EA + M+ P+V T N L+ A
Sbjct: 208 YELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDA 267
Query: 125 LCEAGD-----------------LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
LC+ G ++KAK V +G + V ++H+Y I++ L +
Sbjct: 268 LCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVD 327
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
EA L EM K P T+ ++I +C+ I+ A EL+ ++ A+ + + L
Sbjct: 328 EALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFL 387
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + ++ +I L K ER A +L+QM G DV+ YT L +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQ 395
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ G+ P++ TYN+ I+GLCK+ + + A I ++ G K V T N
Sbjct: 396 VDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC G +A ++++M G ++ TY ++ L E +A LL EM+ +
Sbjct: 456 MINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 85/176 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L ++ + G PD + T ++ G+ G + D ++ G + +Y + IN
Sbjct: 102 AFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILIN 161
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+Q++ + NVV +T++ +LC+ +++A + +M +K V
Sbjct: 162 GLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSP 221
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
++ T+ ++ G + EA L EM+ P TF+ ++ +C++G E
Sbjct: 222 DVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKET 277
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 120/220 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T MI +E++ A +L++MK+ G+ P+ YT ++ G G++ + +L
Sbjct: 284 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 343
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M G P++ TYN +NGLCK+ +V EA ++++ + G KP+ T N L+ C+
Sbjct: 344 MNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCK 403
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++ +A + +M G++ ++H+Y ++ + + E+ + EE ++ P + T
Sbjct: 404 QENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKT 463
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++IC C++G + A++ ++ AP + + A++
Sbjct: 464 YTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAII 503
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 1/225 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P +++FT MI L K A +L +M G KP+V +T ++ G+ +G K
Sbjct: 209 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEK 268
Query: 64 LDELFDEMLVL-GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
LF +++ P+V TY I+G C+++K++ A ++ M + G PN T TL+
Sbjct: 269 AFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLI 328
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+AG+ +A +M M +G NL TY +++GL + + EA +LE+ +
Sbjct: 329 DGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLK 388
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C++ I +AL L K++ P ++ L+
Sbjct: 389 PDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 433
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + M+ K ++A L+ M + G D +T+++S +G +
Sbjct: 140 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 199
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
F ++ +GL P++ + I GLCK+ + +A ++++ M+ G KPNV T +L+
Sbjct: 200 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 259
Query: 125 LCEAGDLSKA-KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G KA + +K + + + N+ TY M+ G + ++ A +LL M ++ P
Sbjct: 260 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 319
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++T+ +I C+ G A +LM + ++ F+P + A++
Sbjct: 320 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIV 363
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYI-LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G+ P V T +I L K+ A + L ++ + KP+V+ YT ++SG E +
Sbjct: 245 GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNR 304
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ L M GL+P+ TY I+G CK + A +++ M G PN+ T N ++
Sbjct: 305 AEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVN 364
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G + +A ++++ G++ + TY I++ + I +A L +MLK P
Sbjct: 365 GLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQP 424
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C++ + E+ ++ V P + + +++
Sbjct: 425 DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 468
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 101/218 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P +T +I K A ++N M +G P++ Y +++G+ G
Sbjct: 312 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 371
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ ++ GL PD +TYN+ ++ CKQ + +A+ + + M+K+G +P++ + T
Sbjct: 372 VQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTT 431
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + +++ +E G+ TY M+ G + + A +
Sbjct: 432 LIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHG 491
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P S T+ II +C++ +EA L ++ K P
Sbjct: 492 CAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 529
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL-FDEMLVLGLIPDVYTY 83
R +A+ ++ +M G+ P+ ++ + +E V+ EL F+EM V G+ PD +Y
Sbjct: 90 RLKEAVEMVIEMHNQGLVPNTRTLNWIIK-VTSEMGLVEYAELLFEEMCVRGVQPDSISY 148
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
V + CK + EA + + M++ G + T ++ G ++A + +
Sbjct: 149 RVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD 208
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G+E NL + M++GL + I +A +LEEM+ K + P T ++I +C+KG +
Sbjct: 209 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEK 268
Query: 204 ALELMKKIV-AKSFAPGARAWEALL 227
A L K+V +++ P + A++
Sbjct: 269 AFRLFLKLVRSENHKPNVLTYTAMI 293
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V+ FT +I L + D +I ++M + GI PDVV YT++++G V +
Sbjct: 372 MRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALE 431
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K ++FD+M+ G IP+V+TYN I G C K DEA ++ M GC PN V +T
Sbjct: 432 FEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYST 491
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
L+ +L +AG LS+A+ V+++M KG N+H
Sbjct: 492 LVTSLRKAGKLSRARKVLRQMMEKG--RNVH 520
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ +LN M++ GI+P VV +T ++ G+ G + +FDEM+ +G+IPDV Y V I
Sbjct: 365 AVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMIT 424
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G + ++A ++ D MI G PNV T N+++ C AG +A ++KEM KG
Sbjct: 425 GYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSP 484
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
N Y ++ L ++ A +L +M++K
Sbjct: 485 NFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 515
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
++ +QM +G DV Y IV+ G +L LF EM GL PD +TYN+ ++ L
Sbjct: 297 WVYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVL 356
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
+ ++ +A+++++ M + G +P VV TL+ L +G L + + EM G+ ++
Sbjct: 357 GRGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDV 416
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
Y +M+ G V E +A + ++M+ + P T++++I C G +EA ++K+
Sbjct: 417 VAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKE 476
Query: 211 IVAKSFAPGARAWEALL 227
+ K +P + L+
Sbjct: 477 METKGCSPNFVVYSTLV 493
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 27 MDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
++ LY + ++M +G+ PD Y I+L + G+ K EL + M G+ P V +
Sbjct: 327 LNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTT 386
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+GL + +D+ I D M+++G P+VV ++ A + KA+ + +M +G
Sbjct: 387 LIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRG 446
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
N+ TY M+ G + EA +L+EM K P + ++ + + G ++ A
Sbjct: 447 QIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRAR 506
Query: 206 ELMKKIVAK 214
+++++++ K
Sbjct: 507 KVLRQMMEK 515
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+K G+C V + +++ + E ++++M + G + I++ G
Sbjct: 198 QKEGYCHTVNSYHLIMQIFAECEEFKAMWRLVDEMIEKGFPVTARTFNILICTSGEAGFA 257
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
L F + P ++YN ++ L N+ + D M+ G +V T N +
Sbjct: 258 RNLVVKFIKSRSFNYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSDVFTYNIV 317
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ A G L++ + EMG G+ + HTY I+L L E+ +A LL M ++
Sbjct: 318 MVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGI 377
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P F +I + + G +++ + ++V P A+ ++
Sbjct: 378 EPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMI 423
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ + +I L + +A+ + NQM++D I+P+V Y+ ++ G GD
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V E +++M+ G P+V Y ++ LC+ + D+A ++D+MI GC P V+T N
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNN 459
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ LC AG + A V+ +M N+ TY +LDGL EA L+ E+ ++
Sbjct: 460 FIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERK 519
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
T++ I+ G+ + L+L+ K++
Sbjct: 520 VEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVN 553
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 7/248 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V + +++ L + + A +L +M G PD V YT V+S + GD
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL + P V YN I+G+CK+ + EA +++ M+ G PNV++ +T
Sbjct: 230 VDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYST 284
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ L + G++ + V M ++G N+ T+ ++ G + +G+A L M+++
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG 344
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSE 238
P ++ +I +C G ++EA+ + ++ S P + ++ DL +
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSAC 404
Query: 239 TTFAGLFN 246
T+ + N
Sbjct: 405 ETWNKMIN 412
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 116/217 (53%), Gaps = 9/217 (4%)
Query: 15 DMIRFLVKEER----GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
++ +F++K R G L + ++++ G +P V Y +VL ++++ + ++ L++
Sbjct: 110 ELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNN 169
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M GL P+V+TYNV + LC+ KVD A +++ M GC P+ V+ T++ ++C+ GD
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ KA +E+ +K E + Y ++ G+ + EA L+ EM+ + P ++
Sbjct: 230 VDKA----RELAMK-FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYST 284
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C+ G + +L + ++ + P + + +L+
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLI 321
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+ F P V + +I + KE R +A ++N+M G+ P+V+ Y+ V+S + G+
Sbjct: 238 MKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVEL 297
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+F M V G P+V T+ I G + +V +A+ + + MI+ G PNVV NTL+
Sbjct: 298 SLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIH 357
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC G++ +A V +M + N+ TY ++ G ++ A +M+ P
Sbjct: 358 GLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRP 417
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ ++ +CQ + ++A +L+ +++ P
Sbjct: 418 NVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPP 452
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ +I L +L + +M G +P+V +T ++ G G
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L++ M+ G+ P+V YN I+GLC +DEAI + + M K +PNV T +T++
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
++GDL A +M G N+ Y M+D L + +A L++ M+ P
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+N I +C+ G + A+ ++ ++ P R + LL
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELL 496
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V FT +I+ R DA+ + N M ++G+ P+VV Y ++ G+ ++G+ + +
Sbjct: 312 PNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISV 371
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+++M + P+V TY+ I G K + A + + MI GC+PNVV ++ LC+
Sbjct: 372 WNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQ 431
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+A ++ M G + T+ + GL + A +L++M K P T
Sbjct: 432 MSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRT 491
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
++ ++ + + EA L++++
Sbjct: 492 YNELLDGLFRANAFREACGLIREL 515
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P + + +++ L + +A ++ ++++ ++ D V Y ++ G G
Sbjct: 480 MEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGM 539
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCN 119
+ ++ +L +MLV G+ D T N +N CK KV AI+++D++ + + +++T
Sbjct: 540 HQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHT 599
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+L +C +A + EM +G+ N+ T+ +++ G K
Sbjct: 600 IILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSK 643
>Medtr4g068800.4 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KP+V + + G K++E+++EM +G P+ Y+Y++ I C ++++
Sbjct: 240 VKPNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCE 299
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ + M K + +VV+ NT++G C+ GD+ +A+ +EMGL G++ + TY ++ G
Sbjct: 300 KMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGY 359
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
G ++ A L+ ++ML+K F P +ST D ++ +C KG + EA++ ++ V K P
Sbjct: 360 CGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKFDLVPK 419
Query: 220 ARAWEALL 227
+++EAL+
Sbjct: 420 EKSYEALI 427
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +I R D + +M++ I+ DVV Y ++ G GD
Sbjct: 270 MSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGD 329
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E + EM ++G+ V TY + G C V+ A+ + M++ +P+ T +
Sbjct: 330 VGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDM 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ LC G + +A ++ G+ +L +Y ++ G + + EA L EML
Sbjct: 390 VVRLLCYKGRVEEAMKFLRS-GVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLG 448
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K F S ++ I ++G A L K+++
Sbjct: 449 KGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEML 482
>Medtr4g068800.3 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KP+V + + G K++E+++EM +G P+ Y+Y++ I C ++++
Sbjct: 240 VKPNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCE 299
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ + M K + +VV+ NT++G C+ GD+ +A+ +EMGL G++ + TY ++ G
Sbjct: 300 KMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGY 359
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
G ++ A L+ ++ML+K F P +ST D ++ +C KG + EA++ ++ V K P
Sbjct: 360 CGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKFDLVPK 419
Query: 220 ARAWEALL 227
+++EAL+
Sbjct: 420 EKSYEALI 427
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +I R D + +M++ I+ DVV Y ++ G GD
Sbjct: 270 MSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGD 329
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E + EM ++G+ V TY + G C V+ A+ + M++ +P+ T +
Sbjct: 330 VGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDM 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ LC G + +A ++ G+ +L +Y ++ G + + EA L EML
Sbjct: 390 VVRLLCYKGRVEEAMKFLRS-GVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLG 448
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K F S ++ I ++G A L K+++
Sbjct: 449 KGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEML 482
>Medtr4g068800.5 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KP+V + + G K++E+++EM +G P+ Y+Y++ I C ++++
Sbjct: 240 VKPNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCE 299
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ + M K + +VV+ NT++G C+ GD+ +A+ +EMGL G++ + TY ++ G
Sbjct: 300 KMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGY 359
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
G ++ A L+ ++ML+K F P +ST D ++ +C KG + EA++ ++ V K P
Sbjct: 360 CGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKFDLVPK 419
Query: 220 ARAWEALL 227
+++EAL+
Sbjct: 420 EKSYEALI 427
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +I R D + +M++ I+ DVV Y ++ G GD
Sbjct: 270 MSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGD 329
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E + EM ++G+ V TY + G C V+ A+ + M++ +P+ T +
Sbjct: 330 VGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDM 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ LC G + +A ++ G+ +L +Y ++ G + + EA L EML
Sbjct: 390 VVRLLCYKGRVEEAMKFLRS-GVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLG 448
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K F S ++ I ++G A L K+++
Sbjct: 449 KGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEML 482
>Medtr4g068800.2 | PPR containing plant-like protein | HC |
chr4:25806656-25805190 | 20130731
Length = 488
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KP+V + + G K++E+++EM +G P+ Y+Y++ I C ++++
Sbjct: 240 VKPNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCE 299
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ + M K + +VV+ NT++G C+ GD+ +A+ +EMGL G++ + TY ++ G
Sbjct: 300 KMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGY 359
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
G ++ A L+ ++ML+K F P +ST D ++ +C KG + EA++ ++ V K P
Sbjct: 360 CGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKFDLVPK 419
Query: 220 ARAWEALL 227
+++EAL+
Sbjct: 420 EKSYEALI 427
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 3/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +I R D + +M++ I+ DVV Y ++ G GD
Sbjct: 270 MSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGD 329
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E + EM ++G+ V TY + G C V+ A+ + M++ +P+ T +
Sbjct: 330 VGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDM 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ LC G + +A ++ G+ +L +Y ++ G + + EA L EML
Sbjct: 390 VVRLLCYKGRVEEAMKFLRS-GVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLG 448
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K F S ++ I ++G A L K+++
Sbjct: 449 KGFQLNSEIYEVFIDGYVRQGSEEMAEALRKEML 482
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V ++ +I L KE R +A + ++M + G+ P+ V +T ++ G G
Sbjct: 294 PDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRN 353
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M G+ PD+ TYN INGLC+ + EA ++++ MI G KP+ +T TL+ C+
Sbjct: 354 FEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCK 413
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
GD+ A + M +G+EL+ + ++ GL + +A +L++ML P T
Sbjct: 414 DGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPT 473
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C C+KG + +L+K++ PG + AL+
Sbjct: 474 YTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALM 513
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P V F ++ K M+A + +++ + G++P VV + ++SG + +
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L M + PDV+TY+ INGLCK+++V+EA + D M ++G PN VT TL+
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + A + M +G+ +L TY +++GL ++ EA LL EM+ F P
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++ C+ G ++ ALE+ ++V + A+ AL+
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALI 443
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P + FT +I K + AL MK GI+PD++ Y +++G+ +GD
Sbjct: 322 MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L +EM+ G PD T+ ++G CK +D A++I D M++ G + + V
Sbjct: 382 LKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTA 441
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G + A+ ++K+M G + + TY +++D K ++ + LL+EM +
Sbjct: 442 LISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDG 501
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ C++G + A L+ ++ P + LL
Sbjct: 502 RVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILL 548
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P ++ + +I L ++ +A +LN+M +G KPD + +T ++ G +GD
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ D M+ G+ D + I+GLC+ +V +A +++ M+ G KP+ T
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ GD+ ++KEM G + TY +++G + ++ A +LL ML
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536
Query: 181 FYPRSSTFDNIICCMCQKG 199
P TF+ ++ C+ G
Sbjct: 537 VVPNDITFNILLDGHCKHG 555
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E + E+L G P+VY +N+ ++G CK V A + D + + G +P+VV+ NTL+
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C + ++ + + M + + ++ TY +++GL ++ + EA+ L +EM + P
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF +I C+ G I+ AL + + + P + AL+
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALI 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
FT +I L ++ R DA +L M G KPD YT+V+ +GD +L EM
Sbjct: 439 FTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQ 498
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G +P V TYN +NG CKQ ++ A ++ +M+ + PN +T N LL C+ G
Sbjct: 499 RDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSV 558
Query: 133 KAKGVMKEMGL 143
K E GL
Sbjct: 559 DFKIFNGEKGL 569
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V+ FT +I L + D +I ++M + GI PDVV YT++++G V +
Sbjct: 348 MRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALE 407
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K ++FD+M+ G IP+V+TYN I G C K DEA ++ M GC PN V +T
Sbjct: 408 FEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYST 467
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
L+ +L +AG LS+A+ V+++M KG N+H
Sbjct: 468 LVTSLRKAGKLSRARKVLRQMMEKG--RNVH 496
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ +LN M++ GI+P VV +T ++ G+ G + +FDEM+ +G+IPDV Y V I
Sbjct: 341 AVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMIT 400
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G + ++A ++ D MI G PNV T N+++ C AG +A ++KEM KG
Sbjct: 401 GYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSP 460
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
N Y ++ L ++ A +L +M++K
Sbjct: 461 NFVVYSTLVTSLRKAGKLSRARKVLRQMMEK 491
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
++ +QM +G DV Y IV+ G +L LF EM GL PD +TYN+ ++ L
Sbjct: 273 WVYDQMLFEGFLSDVFTYNIVMVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVL 332
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
+ ++ +A+++++ M + G +P VV TL+ L +G L + + EM G+ ++
Sbjct: 333 GRGGELCKAVELLNHMRERGIEPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDV 392
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
Y +M+ G V E +A + ++M+ + P T++++I C G +EA ++K+
Sbjct: 393 VAYTVMITGYVVALEFEKAQKMFDKMISRGQIPNVFTYNSMIRGFCMAGKFDEACSMLKE 452
Query: 211 IVAKSFAPGARAWEALL 227
+ K +P + L+
Sbjct: 453 METKGCSPNFVVYSTLV 469
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 27 MDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
++ LY + ++M +G+ PD Y I+L + G+ K EL + M G+ P V +
Sbjct: 303 LNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGIEPTVVHFTT 362
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+GL + +D+ I D M+++G P+VV ++ A + KA+ + +M +G
Sbjct: 363 LIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMITGYVVALEFEKAQKMFDKMISRG 422
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
N+ TY M+ G + EA +L+EM K P + ++ + + G ++ A
Sbjct: 423 QIPNVFTYNSMIRGFCMAGKFDEACSMLKEMETKGCSPNFVVYSTLVTSLRKAGKLSRAR 482
Query: 206 ELMKKIVAK 214
+++++++ K
Sbjct: 483 KVLRQMMEK 491
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 95/226 (42%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+K G+C V + +++ + E ++++M + G + I++ G
Sbjct: 174 QKEGYCHTVNSYHLIMQIFAECEEFKAMWRLVDEMIEKGFPVTARTFNILICTSGEAGFA 233
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
L F + P ++YN ++ L N+ + D M+ G +V T N +
Sbjct: 234 RNLVVKFIKSRSFNYRPYRHSYNAILHCLLVLNRYKLIEWVYDQMLFEGFLSDVFTYNIV 293
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ A G L++ + EMG G+ + HTY I+L L E+ +A LL M ++
Sbjct: 294 MVAKYRLGKLNQLYRLFHEMGGNGLSPDFHTYNIILHVLGRGGELCKAVELLNHMRERGI 353
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P F +I + + G +++ + ++V P A+ ++
Sbjct: 354 EPTVVHFTTLIDGLSRSGHLDDCEHIFDEMVRIGIIPDVVAYTVMI 399
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I L KE R ++A +L M + G KPD+V Y ++ G + + + EL
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ GL PDV YNV I+G CK VDEA+ + + P + + N+L+ LC
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S K ++ EM ++ TY I++D L + I EA +L M+KK P T
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ C + +N A ++ ++V P + L+
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+++ +I K + +A+ + ++ + P + Y ++ G+ G
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L DEM PDV TYN+ I+ LCK+ ++ EA+ ++ M+K G KPN+VT N
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C +++ AK + M G+E ++ Y ++++G + EA +L +EM K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++++++I +C G I EL+ ++ +P + LL
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P ++ ++ +I L K+ DAL + +Q+ + GI D V Y ++ G + G
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ +L +M+ + PD YT+N+ I+ LCK+ ++ EA ++ M K G KP++VT N
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C ++ +A+ + M +G+E ++ Y +++DG + EA +L +E+ K
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++++++I +C G I+ +L+ ++ + P + L+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 111/214 (51%), Gaps = 1/214 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++++ +I K E +A+ + +M+ + PD+ Y ++ G+ G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL DEM G PDV TYN+ ++ CK D+AI + +++ G P+ T +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHA 584
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ L A+ +K + + G N+ TY I+++ L GEA LLL +M
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + TF+ II + Q+ ++A +L ++++A+
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L KE R ++AL +L M + G+KP++V Y ++ G + ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ GL PD+ YNV ING CK VDEAI + M P++ + N+L+ LC
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + + ++ EM G ++ TY I+LD +A L ++++ +P T
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYT 581
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
I+ +C+ + A + +K ++ +P + + L+ D ++ E
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G P + FT +I + A +L + + G +P++V + +++G G
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + +L G + D +TY INGL K ++ A+ ++ M K +PN+V +
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G +S A G+ ++G +G+ L+ TY ++DG E + LL +M+++
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I +C++G I EA ++ + + P + AL+
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R + +L +M ++ + PD + I++ + EG ++ + M G PD+ TYN
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ G C + V EA ++ + M+K G +P+V+ N L+ C+ + +A + KE+ K
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ + +Y ++DGL I LL+EM P T++ +I +C++G I EA
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
L ++ ++ K P + A++
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMM 447
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I L R +L++M PDVV Y I++ + EG ++ +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ P++ TYN ++G C +N V+ A I + M+K G +P+++ N L+ C+
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + KEM K + ++ +Y ++DGL I LL+EM P T
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVIT 547
Query: 188 FDNIICCMCQKGLINEALELMKKIV 212
++ ++ C+ ++A+ L ++IV
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIV 572
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ N+M + P + +L IV G Y LF ++ G+ P + T+ + I
Sbjct: 38 DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N Q+ A ++ +++K G +PN+VT NT++ C G + KA + + +G
Sbjct: 98 NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ TY +++GL +I A LL+EM K P + +I +C+ G +++AL L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217
Query: 208 MKKIVAKSFAPGARAWEALL 227
+I + A + +L+
Sbjct: 218 CSQIGERGILLDAVTYNSLI 237
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G+ P ++ F +I AL + G D Y +++G+ G
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI---------------------- 100
L EM + P++ Y+ I+GLCK V +A+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 101 -------------QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
Q++ M++ P+ T N L+ ALC+ G + +A+GV+ M +G +
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY +++G + + EA L M+K+ P ++ +I C+ +++EA+ L
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 208 MKKIVAKSFAPGARAWEALL 227
K++ K+ P ++ +L+
Sbjct: 358 FKELCNKNLVPTIASYNSLI 377
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
C+ VD+A+ + M+++ P + LLGA+ G A + ++ KG+ ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
T+ I+++ ++ A LL +LK + P TF+ II C G+I +AL+ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 211 IVAKSF 216
++A+ +
Sbjct: 151 LLAQGY 156
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 34/180 (18%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P + + +I L R +L++M G PDV+ Y I+L
Sbjct: 501 MRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQP 560
Query: 61 YVKLDELFDE----------------------------------MLVLGLIPDVYTYNVY 86
+ K LF + +L+ G P+V TY +
Sbjct: 561 FDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
IN LCK EA+ ++ M P+ +T ++G L + + KA+ + +EM +G+
Sbjct: 621 INALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
>Medtr0026s0200.1 | PPR containing plant-like protein | HC |
scaffold0026:95081-98739 | 20130731
Length = 778
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 111/188 (59%), Gaps = 1/188 (0%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KP+V + ++ G K++E+++EM +G P+ Y+Y++ I C ++++
Sbjct: 240 VKPNVHSFNTLMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCE 299
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ + M K + +VV+ NT++G C+ GD+ +A+ +EMGL G++ + TY ++ G
Sbjct: 300 KMWEKMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGY 359
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
G ++ A L+ ++ML+K F P +ST D ++ +C KG + EA++ ++ V K P
Sbjct: 360 CGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCNKGRVEEAMKFLRSGVGKFDLVPK 419
Query: 220 ARAWEALL 227
+++EAL+
Sbjct: 420 EKSYEALI 427
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 34/227 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +I R D + +M++ I+ DVV Y ++ G GD
Sbjct: 270 MSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEKMRKKEIEADVVSYNTIIGGFCKIGD 329
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E + EM ++G+ V TY + G C V+ A+ + M++ +P+ T +
Sbjct: 330 VGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDM 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC G + +A MK L VGK ++
Sbjct: 390 VVRLLCNKGRVEEA---MK----------------FLRSGVGKFDL-------------- 416
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P+ +++ +I C +G ++EAL+L +++ K F + +E +
Sbjct: 417 -VPKEKSYEALIKGFCFEGRMDEALKLQAEMIGKGFQLNSEIYEVFI 462
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I L KE R ++A +L M + G KPD+V Y ++ G + + + EL
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ GL PDV YNV I+G CK VDEA+ + + P + + N+L+ LC
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S K ++ EM ++ TY I++D L + I EA +L M+KK P T
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ C + +N A ++ ++V P + L+
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+++ +I K + +A+ + ++ + P + Y ++ G+ G
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L DEM PDV TYN+ I+ LCK+ ++ EA+ ++ M+K G KPN+VT N
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C +++ AK + M G+E ++ Y ++++G + EA +L +EM K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++++++I +C G I EL+ ++ +P + LL
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++++ +I K E +A+ + +M+ + PD+ Y ++ G+ G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL DEM G PDV TYN+ ++ CK D+AI + +++ G P+ T +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHA 584
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ L A+ +K + + G N+ TY I+++ L GEA LLL +M
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P + TF+ II + Q+ ++A +L ++++A+ +++ + +L S
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSYFSSILDYAS 696
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 122/227 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P ++ ++ +I L K+ DAL + +Q+ + GI D V Y ++ G + G
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ +L +M+ + PD YT+N+ I+ LCK+ ++ EA ++ M K G KP++VT N
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C ++ +A+ + M +G+E ++ Y +++DG + EA +L +E+ K
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++++++I +C G I+ +L+ ++ + P + L+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L KE R ++AL +L M + G+KP++V Y ++ G + ++
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ GL PD+ YNV ING CK VDEAI + M P++ + N+L+ LC
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + + ++ EM G ++ TY I+LD +A L ++++ +P T
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG-IWPDFYT 581
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
I+ +C+ + A + +K ++ +P + + L+ D ++ E
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEA 633
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G P + FT +I + A +L + + G +P++V + +++G G
Sbjct: 81 LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGM 140
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + +L G + D +TY INGL K ++ A+ ++ M K +PN+V +
Sbjct: 141 IFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSA 200
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G +S A G+ ++G +G+ L+ TY ++DG E + LL +M+++
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I +C++G I EA ++ + + P + AL+
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R + +L +M ++ + PD + I++ + EG ++ + M G PD+ TYN
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ G C + V EA ++ + M+K G +P+V+ N L+ C+ + +A + KE+ K
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ + +Y ++DGL I LL+EM P T++ +I +C++G I EA
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
L ++ ++ K P + A++
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMM 447
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I L R +L++M PDVV Y I++ + EG ++ +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ P++ TYN ++G C +N V+ A I + M+K G +P+++ N L+ C+
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + KEM K + ++ +Y ++DGL I LL+EM P T
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVIT 547
Query: 188 FDNIICCMCQKGLINEALELMKKIV 212
++ ++ C+ ++A+ L ++IV
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIV 572
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ N+M + P + +L IV G Y LF ++ G+ P + T+ + I
Sbjct: 38 DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N Q+ A ++ +++K G +PN+VT NT++ C G + KA + + +G
Sbjct: 98 NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ TY +++GL +I A LL+EM K P + +I +C+ G +++AL L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217
Query: 208 MKKIVAKSFAPGARAWEALL 227
+I + A + +L+
Sbjct: 218 CSQIGERGILLDAVTYNSLI 237
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G+ P ++ F +I AL + G D Y +++G+ G
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI---------------------- 100
L EM + P++ Y+ I+GLCK V +A+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 101 -------------QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
Q++ M++ P+ T N L+ ALC+ G + +A+GV+ M +G +
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY +++G + + EA L M+K+ P ++ +I C+ +++EA+ L
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 208 MKKIVAKSFAPGARAWEALL 227
K++ K+ P ++ +L+
Sbjct: 358 FKELCNKNLVPTIASYNSLI 377
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
C+ VD+A+ + M+++ P + LLGA+ G A + ++ KG+ ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
T+ I+++ ++ A LL +LK + P TF+ II C G+I +AL+ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 211 IVAKSF 216
++A+ +
Sbjct: 151 LLAQGY 156
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 115/209 (55%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F+ +I K + +L +M++ G++ DV Y+ ++SG ++GD + EL
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EML + P+V TY+ +N LCK+ K EA Q++D+M +P+VV L L +
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G S A V+ M +G E N TY +++GL + + +A +LE M KK P T
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSF 216
+ ++ +C G I+EA++L+ +++K F
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEF 405
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + +I V ++ A +L + + G +V + ++L G GD
Sbjct: 85 MASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGD 144
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +LF M LIPD +YN INGLCK ++ EA ++ M CKPN VT +
Sbjct: 145 SHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSA 204
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ GD+ + G+++EM G+E ++ Y ++ G K +I L EML+K
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
P T+ ++ +C+K EA +++ + P A+ L
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVL 310
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 39/287 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P V+ ++ ++ L K+++ +A +L+ M ++PDVV YT++ G+ G
Sbjct: 260 MLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGR 319
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ D M+ G P+ TYN INGLCK+ +VD+A+ I+++M K G KP+VVT +T
Sbjct: 320 ASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYST 379
Query: 121 LLGALCEAGD-------------------------------------LSKAKGVMKEMGL 143
L+ LC G L AK V M
Sbjct: 380 LVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVE 439
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+G N+ TY I++DG + ++ +A L ++ + P ++T+ +I +C+ +++
Sbjct: 440 RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSI 499
Query: 204 ALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFNQN 248
A L K A P + L+ L S + + F + N N
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNAN 546
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ P + + +I L K +R ++A + +MK KP+ V ++ ++ G GD
Sbjct: 155 MKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD 214
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L +EM +GL DV+ Y+ I+G C + ++ ++ + M++ PNVVT +
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSC 274
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ +A ++ M V ++ Y ++ DGL +A +L+ M+K+
Sbjct: 275 LMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T++ II +C++G +++AL +++ + K P + L+
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLV 381
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I+ L K+ R A + M + G ++V Y I++ G ++ G K EL
Sbjct: 409 PDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ + + G+ P+ TY V INGLCK + A + + G +P V NTL+ +LC
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A+ + +EM + ++ ++ I++DG + ++ A LL EML P + T
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNIT 588
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +I + G ++EA L +++V+ P A +++LL
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLL 628
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
R G P V ++ ++ L +E A + +M+ PDVV + I++ G + GD
Sbjct: 508 RASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDV 567
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
EL EML + L+PD T+++ IN K ++DEA + + M+ G P+ V ++L
Sbjct: 568 ESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSL 627
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELN 149
L G K ++++M K V L+
Sbjct: 628 LKGYSLKGKTEKVVSMLQQMADKDVVLD 655
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T +I L K + A + N+ + G +P V Y +++ + E +
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
LF EM PDV ++N+ I+G K V+ A +++ M+ + P+ +T + L+
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G L +A + + M G + + +L G K + + +L++M K
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655
Query: 185 SSTFDNIICCMCQ 197
S I+ C+C
Sbjct: 656 SKLTSTILACLCN 668
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%)
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 136
IP + N I+ L K D I + M + P + + L+ + S A G
Sbjct: 56 IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115
Query: 137 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
V+ + +G LN++ + ++L G + +A L M + C P +++ +I +C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175
Query: 197 QKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + EA EL K++ P + + AL+
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALI 206
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 36/263 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPD--------------- 44
M K+ P V+DFT ++ F+VK + A+ ++ +M GIKPD
Sbjct: 82 MAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLK 141
Query: 45 --------------------VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
VV +TI+++G+ +GD + EL D + G DV TY
Sbjct: 142 LVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYG 201
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
V INGLCK K EA+ + M + PNVV +T++ LC+ G +S+A G+ EM K
Sbjct: 202 VLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 261
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G++ NL TY ++ GL EA LL+EM+K P + + ++ +C++G I +A
Sbjct: 262 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 321
Query: 205 LELMKKIVAKSFAPGARAWEALL 227
++ ++ P + +L+
Sbjct: 322 KSVIGFMILVGEVPDVFTYNSLI 344
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G P + ++ L KE + M A ++ M G PDV Y ++ +
Sbjct: 293 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 352
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F+ M+ G +PD+ Y I+G CK +++A+ ++D MIK+G P+VVT T
Sbjct: 353 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 412
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G C+ G AK + M G NL T I+LDGL + EA L M K
Sbjct: 413 LIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSN 472
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ I+ MC G +N ALEL + AK A+ ++
Sbjct: 473 LDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMI 519
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K G+ V + +I L K + +A+ L +M++ P+VV Y+ V+ G+ +G
Sbjct: 188 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 247
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L EM G+ P++ TY I GLC + EA ++D M+K+G P++ + N
Sbjct: 248 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 307
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G + +AK V+ M L G ++ TY ++D + ++ EA+ + E M+ +
Sbjct: 308 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG 367
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++I C+ IN+A+ L+ +++ F P W L+
Sbjct: 368 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLI 414
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 111/207 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + + P V+ ++ ++ L K+ +AL + +M GIKP++V YT ++ G+ G
Sbjct: 223 MEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGR 282
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L DEM+ +G++PD+ + N+ ++ LCK+ K+ +A ++ MI +G P+V T N+
Sbjct: 283 WKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNS 342
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + +A V + M +G ++ Y ++ G I +A LL+EM+K
Sbjct: 343 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 402
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
F P T+ +I CQ G A EL
Sbjct: 403 FTPDVVTWTTLIGGFCQVGRPLAAKEL 429
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ +T +I K + A+++L++M + G PDVV +T ++ G G
Sbjct: 363 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 422
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ELF M G +P++ T + ++GLCK + EA+ + +M K N+V +
Sbjct: 423 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 482
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L +C AG L+ A + + KG+++N++ Y IM++G + + +A LL M +
Sbjct: 483 ILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENG 542
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S T++ + + + I +++ + + K F+ A E ++
Sbjct: 543 CMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 589
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV-LGLIPDVYTYNVY 86
+AL + M + P V+ +T++L IV Y L EM LG+ PD + NV
Sbjct: 74 EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVV 133
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
IN LC V ++ +M+KLG +P+VVT L+ LC GD+ +A ++ + G
Sbjct: 134 INSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGY 193
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
++ TY ++++GL + EA L +M ++ + P + ++ +C+ GL++EAL
Sbjct: 194 RSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALG 253
Query: 207 LMKKIVAKSFAPGARAWEALL 227
L ++ K P + L+
Sbjct: 254 LCLEMSGKGIKPNLVTYTCLI 274
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P V + +I + + +A + M G PD+V YT ++ G + K
Sbjct: 331 VGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINK 390
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L DEM+ +G PDV T+ I G C+ + A ++ +M K G PN+ TC +L
Sbjct: 391 AMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILD 450
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC++ LS+A + M ++LN+ Y I+LDG+ ++ A L + K
Sbjct: 451 GLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQI 510
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I ++GL+++A +L+ + P + + +
Sbjct: 511 NVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFV 554
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 125/229 (54%), Gaps = 15/229 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA--LYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P V+ ++ + MD LYI+++M+ + P+ Y+IV++G
Sbjct: 298 MMKEGVMPDVVTYSSL----------MDGYCLYIISRMR---VAPNARSYSIVINGFCKI 344
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
K LF EM + PD TYN I+GLCK ++ A ++VD M G +++T
Sbjct: 345 KMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITY 404
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N+L+ ALC+ + KA ++K++ +G++L+++TY I++DGL + + +A ++ +++L
Sbjct: 405 NSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLI 464
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + T+ +I +C +GL+NEA L+ K+ P A E ++
Sbjct: 465 KGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 513
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V++F ++ LVK + + + Q++ +GIKP++V +I+++ G +
Sbjct: 60 PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 119
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L +G P+ T + G C +KV EA+ D ++ LG N V+ TL+ LC+
Sbjct: 120 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 179
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A +++++ K V ++ Y ++DGL + +A L EM+ K P T
Sbjct: 180 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 239
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I C G EA L++++V K+ P + L+
Sbjct: 240 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILV 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++ P ++ +I K + AL + +M+ I PD V Y ++ G+ G
Sbjct: 322 ISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGR 381
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G D+ TYN I+ LCK + VD+AI +V + G + ++ T N
Sbjct: 382 ISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNI 441
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ +KG L + TY IM++GL + + EA LL +M
Sbjct: 442 LIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNG 501
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T + II + + A +L+++++A+
Sbjct: 502 CVPDAVTCETIIRALFENDKNERAEKLLREMIAR 535
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 24/249 (9%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+G+ P + T +++ + +AL+ + + G + V Y +++G+ G+
Sbjct: 125 KMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETR 184
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
++ ++ + DV Y+ I+GLCK V++A ++ MI P VVT N+L+
Sbjct: 185 AALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLI 244
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK--- 179
C G +A G+++EM LK + +++T+ I++D L + +I EA + M+K+
Sbjct: 245 YGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVM 304
Query: 180 -------------CFY--------PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
C Y P + ++ +I C+ ++++AL L ++ + AP
Sbjct: 305 PDVVTYSSLMDGYCLYIISRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAP 364
Query: 219 GARAWEALL 227
+ +L+
Sbjct: 365 DTVTYNSLI 373
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G ++ + +I L K A+ ++ ++K GI+ D+ Y I++ G+ +G
Sbjct: 392 MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGR 451
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G V+TY + INGLC + ++EA ++ M GC P+ VTC T
Sbjct: 452 LKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCET 511
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL E +A+ +++EM +G+
Sbjct: 512 IIRALFENDKNERAEKLLREMIARGL 537
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 64/147 (43%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ML+L P V + ++ L K I + + G KPN+V+ + L+ C
Sbjct: 50 FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 109
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + A + ++ G N T ++ G ++ EA + +L F+ +
Sbjct: 110 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 169
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ +I +C+ G AL+++++I K
Sbjct: 170 YGTLINGLCKIGETRAALQMLRQIEGK 196
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 123/238 (51%), Gaps = 1/238 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G CP V+ FT ++R + A + ++M G+KPD + YT + G + G+
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + +EM G PD+ TYNV INGLCK D+A ++V M G P+ VT +
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ A +G L KA+ V +M KG+ ++ TY +++ + + A +EM K
Sbjct: 528 IIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKG 587
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
P T++ +I +C++ +++ A L ++ +K +P + +L++ S+L Y +
Sbjct: 588 VSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTY-TILINENSNLQYWQ 644
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + ++ L + R DA L+ M + + PD+V Y ++ G G++ +
Sbjct: 307 GALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEA 366
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
LF E+ L+P V TYN I+G C+ +D A + D MIK G P+VVT L+
Sbjct: 367 LLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRG 426
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G+L AK + EM +G++ + Y + G + +A + EEM + F P
Sbjct: 427 FCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPD 486
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I +C+ G ++A EL++K+ + P + +++
Sbjct: 487 LITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 106/198 (53%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
L + +M +G+ PDV VL + + +++E++ M+ + P + T+N ++
Sbjct: 157 LMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDS 216
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK+ +V A++++D M GC PN V+ N L+ L G+ +AK ++++M + G++++
Sbjct: 217 RCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVS 276
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
HTY ++ G K EA+ L EML + P T++ I+ +C+ G +++A +
Sbjct: 277 AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLD 336
Query: 210 KIVAKSFAPGARAWEALL 227
+V + P ++ L+
Sbjct: 337 VMVNEDLMPDLVSYNTLI 354
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 109/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F M+ KE A+ +L+ M+ G P+ V Y ++++G+ +G++ + EL
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKEL 264
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++M +LGL +TYN I G CK+ +EA + M+ G P VVT NT++ +LC
Sbjct: 265 IEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCR 324
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +S A+ + M + + +L +Y ++ G EA LL E+ K P T
Sbjct: 325 LGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVT 384
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ G ++ A + ++ P + L+
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + ++++ + P VV Y ++ G G+ + D+M+ GL PDV T+ + +
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G C+ + A ++ D M+ G KP+ + T + + G+ SKA G+ +EM +G
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+L TY ++++GL +A+ L+++M + P T+ +II GL+ +A E+
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544
Query: 208 MKKIVAKSFAPGARAWEALLLHS 230
++ K P + +L+HS
Sbjct: 545 FSDMLKKGIHPSVVTY-TVLIHS 566
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 104/223 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + +++ L + + + + M + I+P +V + ++ EG+ +
Sbjct: 167 GLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRA 226
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ D M + G P+ +YNV +NGL + + D A ++++ M LG K + T N L+
Sbjct: 227 VEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRG 286
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ +A + +EM +G + TY ++ L + +A L+ M+ + P
Sbjct: 287 FCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPD 346
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ +I + G EAL L ++ +K+ P + L+
Sbjct: 347 LVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLI 389
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG + +IR K+E +A + +M G P VV Y ++ + G
Sbjct: 268 MSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGR 327
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
D M+ L+PD+ +YN I G + EA+ + + P+VVT NT
Sbjct: 328 VSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNT 387
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G+L AKG+ +M G+ ++ T+ I++ G + A L +EML +
Sbjct: 388 LIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRG 447
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + I + G ++A + +++ A+ F P + L+
Sbjct: 448 LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ +T +I R A ++M+ G+ P+V+ Y ++ G+ E
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF EM G+ P+ YTY + IN +A+++ M+ KP+ T +
Sbjct: 608 MDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSA 667
Query: 121 LLGALCE 127
L+ L +
Sbjct: 668 LMKHLSK 674
>Medtr4g068800.1 | PPR containing plant-like protein | HC |
chr4:25806656-25804340 | 20130731
Length = 611
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KP+V + + G K++E+++EM +G P+ Y+Y++ I C ++++
Sbjct: 240 VKPNVHSFNTFMLCCYQSGLVEKVEEIWNEMSEMGCDPNAYSYSLLIAAFCDGGRMEDCE 299
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ + M K + +VV+ NT++G C+ GD+ +A+ +EMGL G++ + TY ++ G
Sbjct: 300 KMWEEMRKKEIEADVVSYNTIIGGFCKIGDVGRAEEFYREMGLVGIDATVSTYEHLVKGY 359
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK-SFAPG 219
G ++ A L+ ++ML+K F P +ST D ++ +C KG + EA++ ++ V K P
Sbjct: 360 CGIEDVESAVLVYKDMLRKDFRPDASTLDMVVRLLCYKGRVEEAMKFLRSGVGKFDLVPK 419
Query: 220 ARAWEALL 227
+++EAL+
Sbjct: 420 EKSYEALI 427
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P ++ +I R D + +M++ I+ DVV Y ++ G GD
Sbjct: 270 MSEMGCDPNAYSYSLLIAAFCDGGRMEDCEKMWEEMRKKEIEADVVSYNTIIGGFCKIGD 329
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E + EM ++G+ V TY + G C V+ A+ + M++ +P+ T +
Sbjct: 330 VGRAEEFYREMGLVGIDATVSTYEHLVKGYCGIEDVESAVLVYKDMLRKDFRPDASTLDM 389
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ LC G + +A ++ G+ +L +Y ++ G + + EA L EML
Sbjct: 390 VVRLLCYKGRVEEAMKFLRS-GVGKFDLVPKEKSYEALIKGFCFEGRMDEALKLQAEMLG 448
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K F S ++ I ++ LM KI+
Sbjct: 449 KGFQLNSEIYEVFIDGCIANTMMISFCHLMVKII 482
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 116/215 (53%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I + K++ DA + ++M GI P+VV Y+ ++SG G +LF++++
Sbjct: 206 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 265
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ + PD YT+N+ ++G CK K+ E + M+K G P+VVT N+L+ C +++
Sbjct: 266 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVN 325
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
AK + M GV ++ +Y I+++G ++ +A L EM K P T++++I
Sbjct: 326 TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 385
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + G I+ AL+L+ ++ + P + +++
Sbjct: 386 DGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 420
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 24/239 (10%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--IVAEGDYVKLD 65
P F ++ K+ + + + M + GI PDVV Y ++ G +V E + K
Sbjct: 271 PDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK-- 328
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F+ M G+ PD+ +YN+ ING CK KVD+A+ + + M PNVVT N+L+ L
Sbjct: 329 SIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGL 388
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR- 184
++G +S A ++ +M +GV N+ TY ++D L ++ +A L+ + + P
Sbjct: 389 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 448
Query: 185 -------------------SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
+T++ +I C+KGL +EAL L+ K+ S P A +E
Sbjct: 449 YTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYE 507
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 111/223 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ ++ +I + DA+ + N++ + IKPD + I++ G + +
Sbjct: 233 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 292
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+F M+ G+IPDV TYN ++G C +V+ A I ++M + G P++ + N L+
Sbjct: 293 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 352
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ + KA + EM K + N+ TY ++DGL I A L+++M + P
Sbjct: 353 FCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPN 412
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+++II + + +++A+ L+ K + P + L+
Sbjct: 413 ILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 455
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + +I K ++ A+ + N+M I P+VV Y ++ G+ G
Sbjct: 334 MAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGR 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L D+M G+ P++ TYN I+ L K ++VD+AI ++ G +P++ T
Sbjct: 394 ISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI 453
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ ++G ++ ++TY +M+ G K EA LL +M
Sbjct: 454 LIDGLCK---------------VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSS 498
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P + T++ I + ++A +L ++++ + + ++ + LT + T
Sbjct: 499 CIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYPCSSMKIHQSLTMVQHT 558
Query: 241 F 241
+
Sbjct: 559 W 559
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F ++L +G P+ T N I GLC + ++ +A D ++ LG + V+ TL+ L
Sbjct: 119 SVFAKILKMGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGL 178
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G+ A +++ + K V+LN Y ++ G+ + +A L EM+ K P
Sbjct: 179 CKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNV 238
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I G + +A++L KI+ ++ P + L+
Sbjct: 239 VTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILV 280
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 93/234 (39%), Gaps = 35/234 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + ++ + G P+ + ++ G+ +G + D+++ LG D +Y I+
Sbjct: 117 AFSVFAKILKMGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIH 176
Query: 89 GL-----------------------------------CKQNKVDEAIQIVDSMIKLGCKP 113
GL CK V++A + M+ G P
Sbjct: 177 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 236
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
NVVT + L+ G L A + ++ L+ ++ + +T+ I++DG ++ E +
Sbjct: 237 NVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 296
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M+K+ P T+++++ C +N A + + P R++ L+
Sbjct: 297 AMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 350
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 2/206 (0%)
Query: 23 EERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
+++ M L+ +L +M G++PD V YT ++ EG + K E D M+ P+V
Sbjct: 650 KQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVV 709
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TY ++NGLCK ++D A + + M+ PN VT L +L + G++ +A + EM
Sbjct: 710 TYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM 769
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
LKG+ N TY I++ G + EA+ +L EM + +P T+ II C+ G +
Sbjct: 770 -LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDV 828
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
A+EL ++ K P + A+ L+
Sbjct: 829 GAAVELWDTMLRKGVEPDSVAFNLLI 854
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V FT +I L +A + ++M + IKP V Y +++ G + K EL
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFEL 555
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ML GL+PD YTY I+GLC +V A +D + K K N + + LL C
Sbjct: 556 LEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCG 615
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L++A EM +G+ ++L + +++DG + + ++ LL++M + P S
Sbjct: 616 QGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVI 675
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I ++G ++ E + +V + P + A +
Sbjct: 676 YTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFM 715
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P FT +I K+ + A + +M + I P V +T ++ G+ + + +
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+LFDEM+ + P TYNV I G CK + +D+A ++++ M+ G P+ T L+
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
LC G +S AK + ++ K ++LN Y +L G G+ + EA EM+++
Sbjct: 578 LCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQR 632
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ GF P + + +I L K E A + M + + V Y+I++ G
Sbjct: 351 RFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLD 410
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ F M+ G+ +Y YN ING CK + A + MI G +P T TL+
Sbjct: 411 VAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLI 470
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ + KA + +EM K + +++T+ ++ GL E+ EAS L +EM+++
Sbjct: 471 SGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIK 530
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+ +++A EL++ ++ P + L+
Sbjct: 531 PTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++ +M +G++P +T ++SG + K +L+ EM + P VYT+ I
Sbjct: 447 AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIY 506
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLC N++ EA ++ D M++ KP VT N ++ C+A ++ KA ++++M G+
Sbjct: 507 GLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVP 566
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ +TYR ++ GL + A ++++ KK + ++ C +G + EAL
Sbjct: 567 DTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEAL 623
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 96/193 (49%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M +DGI+ + Y +++G GD + L+ +M+ GL P T+ I+G CK
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
+V++A ++ M + P+V T L+ LC ++++A + EM + ++ TY
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+M++G + +A LLE+ML P + T+ +I +C G ++ A + + + K
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597
Query: 215 SFAPGARAWEALL 227
+ + ALL
Sbjct: 598 NLKLNEMCYSALL 610
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 110/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R+ G V+ + ++ + ++ D + ++N+M + G P + ++ G+ +G+
Sbjct: 279 LREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGN 338
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L ++ G +P+++ YN IN LCK +D+A + +M + N VT +
Sbjct: 339 IDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSI 398
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C+ G L A+ M G+ ++ Y +++G ++ A L +M+ +
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++TF +I C+ + +A +L +++ K AP + AL+
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALI 505
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 8/223 (3%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
++ + +I L K ++AL + +++ G+K DVV Y ++ G + L
Sbjct: 252 SIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLM 311
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+EM+ LG +P + ++GL K+ +D A +V + + G PN+ N L+ ALC+
Sbjct: 312 NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKG 371
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV--GKAEIGEASL--LLEEMLKKCFYPR 184
DL KA+ + K M + LN TY I++D G ++ E+ ++E+ +++ YP
Sbjct: 372 EDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP- 430
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I C+ G ++ A L K++ + P A + L+
Sbjct: 431 ---YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLI 470
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 2/242 (0%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
+ F ++ ++ R DA+ +L M + + P+V + +L+G++ ++ + E+F
Sbjct: 147 STLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
DE + G+ PD YT + I LC+ A + + M ++VT N L+ LC+
Sbjct: 207 DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKG 266
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G + +A V K + KG++ ++ TY ++ G + + L+ EM++ F P +
Sbjct: 267 GGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAV 326
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFN 246
++ + +KG I+ A +L+ K+ F P + AL+ L G DL +E + + +
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHS 386
Query: 247 QN 248
N
Sbjct: 387 MN 388
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LGF P + ++ L K+ A ++ ++ + G P++ Y +++ + D
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + L+ M + L + TY++ I+ CK+ +D A MI+ G + + N+
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNS 433
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ GDLS A+ + +M +G+E T+ ++ G ++ +A L EM +K
Sbjct: 434 LINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE 493
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I +C + EA +L ++V + P + ++
Sbjct: 494 IAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMI 540
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T + L K A ++ +M I P+ V Y L + EG+ + +L
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EML GL+ + TYN+ I G CK ++ EA +++ M + G P+ +T +T++ C
Sbjct: 766 HHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCR 824
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+GD+ A + M KGVE + + +++ G + +A L +ML + PR
Sbjct: 825 SGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPR 881
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G + +IR K R ++A +L++M ++GI PD + Y+ ++ GD
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
EL+D ML G+ PD +N+ I G C +D+A ++ + M+ G KP +
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQI 883
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 116/212 (54%), Gaps = 7/212 (3%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL---DELFDEMLVLGLIPDVYTYNVYIN 88
I N+MK+ +P+++ +L+ +V L E+F + + LG+ P+V T+N+ I+
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C N +EA+++++ M + GC P+ VT NT+L ALC+ L++ + ++ +M G+
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N +TY I++ G + EA+ ++E M K P T++ ++ +C +G I+EA+ L
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339
Query: 209 KKIVAKSFAPGARAWEALL----LHSGSDLTY 236
K+ + P + L+ H GSD +
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAF 371
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G CP + + ++ L K + +L QMK G+ P+ Y I++ G
Sbjct: 237 MGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKW 296
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+ + M G++PDV+TYN + GLC + K+DEA+++ D M P+VVT NT
Sbjct: 297 LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNT 356
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ E A +++EM +GV+ N T+ IM+ + +I EAS ++ +M++
Sbjct: 357 LIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESG 416
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
F P T++ +I C+ G + EA ++M ++ K
Sbjct: 417 FSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG P V F +I + +AL ++NQM + G PD V Y VL+ +
Sbjct: 204 KLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLT 263
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
++ +L +M GL P+ TYN+ ++G CK + EA ++++ M G P+V T NT++
Sbjct: 264 QVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMV 323
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G + +A + +M + ++ TY ++DG A L+EEM +
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVK 383
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T + +I C +G I+EA +M K+V F+P + ++
Sbjct: 384 ENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMI 428
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 2/237 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
RK G+ + + +I K+E+ AL + +MK+ GI ++ Y ++ G+ G
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ + +E+L GL+PD T N+ I+G C + V++A Q + M++ KP++ TCN L
Sbjct: 543 DQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L LC G L K + KG ++ TY I++ + + +A L+ EM K
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
P T++ I+ + + G EA +L K K + L SD+ YSE
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPEL--GTSDMMYSE 717
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 2/219 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M P V+ + +I E RG DA + ++ +MK G+K + V + I++ EG
Sbjct: 342 MESFKLVPDVVTYNTLIDGCF-EHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEG 400
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ + +M+ G PD +TYN ING CK K+ EA +++D M + G K + T N
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TLL +C L A + + +G L+ TY ++ G + A L EEM +
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T++ II +C G ++A++ + +++ K P
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVP 559
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + ++ K + +A ++ M G+ PDV Y ++ G+ EG
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D+M L+PDV TYN I+G + D A ++V+ M G K N VT N
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G + +A VM +M G + TY M++G ++ EA +++EM +K
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ T + ++ MC + +++A L K + +
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGY 487
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 11/225 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G ++ + +IR L + A+ LN++ + G+ PD I++ G EG
Sbjct: 517 MKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGA 576
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + ++M+ L PD++T N+ + GLC++ +++ + + ++ I G + VT N
Sbjct: 577 VEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNI 636
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL------- 173
++ + C+ L A +M EM K +E + +TY ++ GL EA L
Sbjct: 637 IISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKG 696
Query: 174 EEMLKKCFYPRSSTFDNI----ICCMCQKGLINEALELMKKIVAK 214
+++ + P T D + I +C +G +A++L ++ K
Sbjct: 697 QQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQK 741
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
MI++ E + +A ++ +M + G PD Y +++G G + ++ DEM G
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
L D +T N ++ +C + ++D+A + K G + VT TL+ + +A
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ +EM G+ + TY ++ GL + +A L E+L+K P ST + II
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY 571
Query: 196 CQKGLINEALELMKKIVAKSFAP 218
C +G + +A + K+V S P
Sbjct: 572 CWEGAVEKAFQFHNKMVEHSLKP 594
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 24 ERGMDALYILN-QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 82
E+ +D Y L + ++ G D V Y ++ G + + +L++EM G++ + T
Sbjct: 469 EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIIT 528
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
YN I GLC K D+A+ ++ +++ G P+ T N ++ C G + KA +M
Sbjct: 529 YNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMV 588
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
++ ++ T I+L GL + + + L + K + T++ II C++ +
Sbjct: 589 EHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLE 648
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
+A +LM ++ K+ P + A++
Sbjct: 649 DAFDLMTEMEGKNLEPDRYTYNAIV 673
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++R L +E L + N G D V Y I++S E +L++
Sbjct: 594 PDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER---RLEDA 650
Query: 68 FD---EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-------CKPNVVT 117
FD EM L PD YTYN + GL K + +EA ++ + G P + T
Sbjct: 651 FDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGT 710
Query: 118 CNTL----LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+ + + +LC G A + ++ KGV LN +TY ++DGL+ +
Sbjct: 711 SDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKR 760
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAG---DLSKAKGVMKEMGLKGVELNLHTYRIML 157
QI + M +L +PN++TCNTLL AL + L ++ V ++ GV+ N++T+ I++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
G EA L+ +M + P + T++ ++ +C++ + + +L+ ++
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 279 PNRNTYNILV 288
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 35/263 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K P V F ++ KE + DA +L M +D IKPDVV Y ++ G +
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-------------------- 100
K ++FD M G+I +V Y +NG CK VDEAI
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381
Query: 101 ---------------QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++VD M G PN+VT +++L ALC+ + KA ++ + +G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ +++TY I++ GL + +A + E++L K + + +I C KG ++AL
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 206 ELMKKIVAKSFAPGARAWEALLL 228
L+ K+ P A+ +E ++L
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVIL 524
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I + K + DA + +QM I PDV Y ++SG A +L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + P+VYT+N+ ++G CK+ KV++A ++ M+K KP+VVT N+L+ C
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M GV N+ Y M++G + EA L EEM + P T
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVT 378
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I AL+L+ ++ + P + ++L
Sbjct: 379 YSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 113/210 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V +T M+ K + +A+ + +M+ I P+VV Y+ ++ G+ G
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYA 395
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM G P++ TY+ ++ LCK + VD+AI ++ ++ G +P++ T L+
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC++G L A+ V +++ +KG L+++ Y +M+ G K +A LL +M P
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T++ +I + +K + A +L+++++ +
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVR 545
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP V + +I + A+ + N+MK++ I P+V + I++ G EG
Sbjct: 233 CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKV 292
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ M+ + PDV TYN ++G C NKV++A I DSM G NV T++ C
Sbjct: 293 VLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFC 352
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + +A + +EM + + N+ TY ++DGL I A L++EM + P
Sbjct: 353 KIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIV 412
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I+ +C+ +++A+ L+ + + P + L+
Sbjct: 413 TYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F ++ LVK + AL + QM+ +GI+ D + I+++ G +
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L G P T+N I GLC + + +A+ D ++ G + V+ TL+ LC+
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++ A ++K + K V+ N Y +++D + + +A L +M+ K P T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +N A++L K+ ++ P + L+
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P + +LS +V + L +M + G+ D +T+N+ IN + + I
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++K G P +T NTL+ LC G + +A ++ +G L+ +Y +++GL
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
I A LL+ + K P + ++ II MC+ L+N+A +L ++VAK P
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 223 WEALL--LHSGSDLTYSETTFAGLFNQN 248
+ AL+ + S L Y+ F + +N
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKEN 266
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 77/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K A+ +L +K GI+PD+ YTI++ G+ G
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G DVY Y V I G C + D+A+ ++ M GC PN T
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM ++G+
Sbjct: 522 VILSLFEKDENDTAEKLLREMIVRGL 547
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P V+ ++ +I L K R AL ++++M G P++V Y+ +L +
Sbjct: 367 MRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHH 426
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L + G+ PD+YTY + I GLC+ ++++A + + ++ G +V
Sbjct: 427 VDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ C+ G KA ++ +M G N TY +++ L K E A LL EM+
Sbjct: 487 MIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ I ++ + G P + + ++ G+ +G + D+++ G D +Y IN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK ++ A+Q++ + +PN V N ++ +C+A ++ A + +M K +
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G +++ A L +M K+ P TF+ ++ C++G +N+A ++
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 209 KKIVAKSFAPGARAWEALL 227
++ P + +L+
Sbjct: 295 AIMMKDDIKPDVVTYNSLM 313
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 35/263 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K P V F ++ KE + DA +L M +D IKPDVV Y ++ G +
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-------------------- 100
K ++FD M G+I +V Y +NG CK VDEAI
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381
Query: 101 ---------------QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++VD M G PN+VT +++L ALC+ + KA ++ + +G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ +++TY I++ GL + +A + E++L K + + +I C KG ++AL
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 206 ELMKKIVAKSFAPGARAWEALLL 228
L+ K+ P A+ +E ++L
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVIL 524
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I + K + DA + +QM I PDV Y ++SG A +L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + P+VYT+N+ ++G CK+ KV++A ++ M+K KP+VVT N+L+ C
Sbjct: 259 FNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++KAK + M GV N+ Y M++G + EA L EEM + P T
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVT 378
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I AL+L+ ++ + P + ++L
Sbjct: 379 YSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 113/210 (53%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V +T M+ K + +A+ + +M+ I P+VV Y+ ++ G+ G
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYA 395
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM G P++ TY+ ++ LCK + VD+AI ++ ++ G +P++ T L+
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC++G L A+ V +++ +KG L+++ Y +M+ G K +A LL +M P
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ T++ +I + +K + A +L+++++ +
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVR 545
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP V + +I + A+ + N+MK++ I P+V + I++ G EG
Sbjct: 233 CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKV 292
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ M+ + PDV TYN ++G C NKV++A I DSM G NV T++ C
Sbjct: 293 VLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFC 352
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + +A + +EM + + N+ TY ++DGL I A L++EM + P
Sbjct: 353 KIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIV 412
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ +I+ +C+ +++A+ L+ + + P + L+
Sbjct: 413 TYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F ++ LVK + AL + QM+ +GI+ D + I+++ G +
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L G P T+N I GLC + + +A+ D ++ G + V+ TL+ LC+
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++ A ++K + K V+ N Y +++D + + +A L +M+ K P T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +N A++L K+ ++ P + L+
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV 278
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 2/208 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P + +LS +V + L +M + G+ D +T+N+ IN + + I
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++K G P +T NTL+ LC G + +A ++ +G L+ +Y +++GL
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
I A LL+ + K P + ++ II MC+ L+N+A +L ++VAK P
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 223 WEALL--LHSGSDLTYSETTFAGLFNQN 248
+ AL+ + S L Y+ F + +N
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKEN 266
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 77/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ ++ ++ L K A+ +L +K GI+PD+ YTI++ G+ G
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F+++LV G DVY Y V I G C + D+A+ ++ M GC PN T
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYEL 521
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM ++G+
Sbjct: 522 VILSLFEKDENDTAEKLLREMIVRGL 547
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P V+ ++ +I L K R AL ++++M G P++V Y+ +L +
Sbjct: 367 MRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHH 426
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L + G+ PD+YTY + I GLC+ ++++A + + ++ G +V
Sbjct: 427 VDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ C+ G KA ++ +M G N TY +++ L K E A LL EM+
Sbjct: 487 MIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ I ++ + G P + + ++ G+ +G + D+++ G D +Y IN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK ++ A+Q++ + +PN V N ++ +C+A ++ A + +M K +
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G +++ A L +M K+ P TF+ ++ C++G +N+A ++
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 209 KKIVAKSFAPGARAWEALL 227
++ P + +L+
Sbjct: 295 AIMMKDDIKPDVVTYNSLM 313
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 118/220 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ KE + DA +L M + G+K + V Y+ ++ G G + +L
Sbjct: 276 PTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDL 335
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M++ + P+VYT+ + ++ CK+ K+D+A +++ M++ PNV+T + LL C
Sbjct: 336 FNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGYCL 395
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
++++AK + K M +GV ++ +Y IM+ + EA L EEM K +P T
Sbjct: 396 VNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVT 455
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++ +C+ I AL+L+ ++ + P + ++L
Sbjct: 456 YSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSIL 495
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 37/257 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--IVAEGDYVK-- 63
P V FT ++ KEE+ A Y+LN M + + P+V+ Y+ +L G +V E + K
Sbjct: 346 PNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGYCLVNEVNEAKRI 405
Query: 64 ----------------------------LDE---LFDEMLVLGLIPDVYTYNVYINGLCK 92
+DE LF+EM + PDV TY+ ++GLCK
Sbjct: 406 FKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCK 465
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
++ A+++VD M G PN+ T +++L AL + + +A + KE KG++ N++T
Sbjct: 466 SERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYT 525
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS--TFDNIICCMCQKGLINEALELMKK 210
Y I +DGL + +A + E++L + + T+ +I C+KGL +EAL L+
Sbjct: 526 YTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRKGLFDEALTLLSN 585
Query: 211 IVAKSFAPGARAWEALL 227
+ S P ++ ++
Sbjct: 586 MKDNSCIPDTVTYKTII 602
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I + K++ A + +M I P+V+ Y +L G+ G L
Sbjct: 206 PHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISL 265
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M+ + P VYT+N+ ++G CK+ KV +A ++ M+K G K N VT +TL+ C
Sbjct: 266 FKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCI 325
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L +A + +M L V N++T+ I++D + +I +A+ +L M++K P T
Sbjct: 326 VGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVIT 385
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ ++ C +NEA + K + +
Sbjct: 386 YSCLLYGYCLVNEVNEAKRIFKSMTQR 412
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
P + F ++ LVK + + +M+ DG+KP++V + I+L+ G
Sbjct: 65 PPISQFNKILASLVKSNHYPTVVLLCRKMELNDGVKPNLVTFNILLNCYSHLGQMSFAFS 124
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ +++ +G PDV T+N ING C + + DE ++ D ++ LG + N ++ TL+ LC
Sbjct: 125 VLAKIIKIGYHPDVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQLNQISYGTLINKLC 184
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ G+ +A +++++ K V+ ++ Y +++D + + A L EML K P
Sbjct: 185 KGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVI 244
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ ++ +C G + +A+ L K +V+++ P + L+
Sbjct: 245 TYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFNILV 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 2/219 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V+ +T MI K + +A + +M+ I PDVV Y+ ++ G+
Sbjct: 409 MTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSER 468
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G P+++TY+ ++ L K+++V+EAI++ G +PNV T
Sbjct: 469 IPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTI 528
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNL--HTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+ LC+ G L A V +++ + N +T+ +M+ G K EA LL M
Sbjct: 529 FIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRKGLFDEALTLLSNMKD 588
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
P + T+ II + KG ++A +L + I + +F
Sbjct: 589 NSCIPDTVTYKTIISSLLDKGEKDKARKLCELIASGNFT 627
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K +AL +L Q+ ++P VV Y +++ + +
Sbjct: 167 LGFQLNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNV 226
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+L+ EML + P+V TYN ++GLC ++ +AI + M+ P V T N L+
Sbjct: 227 AFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFNILVD 286
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ G + AK V+ M GV+LN TY ++ G ++ EA L +M+ P
Sbjct: 287 GFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNP 346
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++ C++ I++A ++ ++ K P + LL
Sbjct: 347 NVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLL 390
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G + ++ +IR + +A+ + N+M + P+V +TI++ E
Sbjct: 304 MMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEK 363
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + + + M+ + P+V TY+ + G C N+V+EA +I SM + G +V++
Sbjct: 364 IDKANYVLNVMMEKDVTPNVITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTI 423
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ + +A+ + +EM K + ++ TY ++DGL I A L++EM +
Sbjct: 424 MISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVDGLCKSERIPNALKLVDEMHDRG 483
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I+ + +K + EA+EL K+ K P + +
Sbjct: 484 QPPNIFTYSSILDALLKKHQVEEAIELFKEFKDKGIQPNVYTYTIFI 530
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 108/225 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+G+ P V+ F +I + + L +++ G + + + Y +++ + G+
Sbjct: 131 KIGYHPDVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQLNQISYGTLINKLCKGGETR 190
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +L ++ + P V YNV I+ +CK V+ A + M+ PNV+T NTLL
Sbjct: 191 EALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLL 250
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC G L A + K M + + ++T+ I++DG + ++ +A ++L M+K
Sbjct: 251 HGLCIVGQLKDAISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVK 310
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T+ +I C G + EA++L K++ P + L+
Sbjct: 311 LNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILV 355
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 36/198 (18%)
Query: 66 ELFDEMLVL------------------------------------GLIPDVYTYNVYING 89
LF+ ML + G+ P++ T+N+ +N
Sbjct: 53 SLFNRMLHMHPAPPISQFNKILASLVKSNHYPTVVLLCRKMELNDGVKPNLVTFNILLNC 112
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
++ A ++ +IK+G P+VVT NTL+ C G+ + ++ G +LN
Sbjct: 113 YSHLGQMSFAFSVLAKIIKIGYHPDVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQLN 172
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+Y +++ L E EA LL ++ K P ++ +I MC+ L+N A +L
Sbjct: 173 QISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYY 232
Query: 210 KIVAKSFAPGARAWEALL 227
+++AK +P + LL
Sbjct: 233 EMLAKRISPNVITYNTLL 250
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + +I + K++ DA ++M I P VV Y ++ G+ G L
Sbjct: 209 VVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLH 268
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M++ + P VYT+++ ++ CK+ KV EA + M+K KPN+VT N+L+ C
Sbjct: 269 KMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVN 328
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++KA+ + M GV ++H+Y IM+ G + EA L EEM K +P T++
Sbjct: 329 EVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYN 388
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ AL+L+ ++ + P + +LL
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 117/220 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F+ ++ KE + +A + M + +KP++V Y +++G + K + +
Sbjct: 277 PTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESI 336
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M +G+ PDV++Y++ I+G CK VDEA+++ + M P+VVT N+L+ LC+
Sbjct: 337 FNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCK 396
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A ++ EM +G N+ TY +LD L + +A LL ++ P T
Sbjct: 397 SGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ G + +A ++ + ++ + + ++
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I N M Q G+ PDV Y+I++SG + +LF+EM + PDV TYN I+GLC
Sbjct: 336 IFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLC 395
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K ++ A++++ M G PN++T N+LL ALC+ + KA ++ ++ ++ ++
Sbjct: 396 KSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVC 455
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
TY I+++GL + +A + E++L + T++ +I C+KG +
Sbjct: 456 TYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 116/221 (52%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP V+ + +I L + DA+ +L++M + I P V ++I++ EG +
Sbjct: 241 CPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKN 300
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+F M+ + P++ TYN +NG C N+V++A I ++M ++G P+V + + ++ C
Sbjct: 301 VFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFC 360
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + +A + +EM K + ++ TY ++DGL I A L+ EM + P
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+++++ +C+ +++A+EL+ K+ + P + L+
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILI 461
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 107/220 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F ++ LVK + + QM+ +GI ++V +I+++ G +
Sbjct: 67 PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +L G PD T I GLC + + +A+ D ++ LG + N V+ TL+ LC+
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G A +++ + K V L++ Y ++DG+ + +A EM+ K P T
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +IC +C G + +A+ L+ K++ ++ P + L+
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILV 286
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P V ++ MI K + +A+ + +M I PDVV Y ++ G+ G
Sbjct: 340 MAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGR 399
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L EM G P++ TYN ++ LCK + VD+AI+++ + +P+V T N
Sbjct: 400 ISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNI 459
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
L+ LC++G L A+ V +++ + G ++++TY M+ G K
Sbjct: 460 LINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 35/234 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ + + + + G +PD + T ++ G+ +GD K D++L LG + +Y IN
Sbjct: 123 SFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182
Query: 89 GLCKQNKVDEAIQIV---------------DSMIKLGCK--------------------P 113
GLCK + A++++ +++I CK P
Sbjct: 183 GLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
VVT NTL+ LC G L A G++ +M L+ + ++T+ I++D + ++ EA +
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M+KK P T+++++ C +N+A + + AP ++ ++
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+ Q P ++ + +L +V Y + L +M G+ ++ T ++ IN +
Sbjct: 60 LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+ + +++K G +P+ +T TL+ LC GD+ KA ++ G +LN +YR
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+++GL + A +L + K ++ II +C+ L+N+A + ++VAK
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239
Query: 216 FAPGARAWEALL 227
P + L+
Sbjct: 240 ICPTVVTYNTLI 251
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G P + +I VK AL + ++M + G++PDV CY I++ G GD
Sbjct: 178 MWSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGD 237
Query: 61 YVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+VK +++ +L V + P V +YN+ I+GLC+ + E+++I + M K + T +
Sbjct: 238 FVKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYS 297
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ LCE GDL A+ V +EM L+GV+ ++ T ML+GL ++ E+ L EEM
Sbjct: 298 ALIHGLCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEM 354
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L G D Y+ +++G+ EG + ++ + M G + + YN I+
Sbjct: 416 ALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALID 475
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G K NKVD A+Q+ M GC PNVVT N ++ C A +A ++EM KG +
Sbjct: 476 GFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKP 535
Query: 149 NLHTYRIMLDGLV-GKAEIGEASLLL-EEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+L TY ++DGL GK + +L L + L K F P + + +I +C G + AL+
Sbjct: 536 DLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQ 595
Query: 207 L 207
L
Sbjct: 596 L 596
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
Y I++ G+ G K + + G D + Y+ INGLC++ ++DEA ++++ M
Sbjct: 400 YGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMD 459
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
K GCK N N L+ + + A V +EM G N+ TY I+++G
Sbjct: 460 KRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFP 519
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE---ALELMKKIVAKSFAP 218
EA +EEML+K + P T+ +I +CQ G +NE AL L + +AK F P
Sbjct: 520 EAYHCVEEMLEKGWKPDLITYSTLIDGLCQ-GKMNENDTALRLCYQFLAKGFKP 572
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + MI L + R ++L I +MK + K D Y+ ++ G+ GD ++
Sbjct: 256 PSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKV 315
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++EM++ G+ DV T N +NGLCK KVDE+ ++ + M G + NVV+ N L L E
Sbjct: 316 YEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSR-NVVSYNVFLKGLFE 374
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + + V + + ++ TY I++ GL + +A +LE + +
Sbjct: 375 NGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFA 434
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C++G ++EA +++ + + A + AL+
Sbjct: 435 YSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALI 474
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+P + + +L+ + + ++ F G+ P V TYNV + LCK+ + +A +
Sbjct: 114 RPGIRSFNTLLNAFAESHQWDRAEKFFAYFETAGVEPSVQTYNVLMKVLCKKGEFLKAKK 173
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+V M +G KP+ T TL+ + DL+ A V EM +GVE ++ Y I++DG
Sbjct: 174 LVTWMWSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFF 233
Query: 162 GKAEIGEASLLLEEMLK-KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ + ++ E +L+ + +P +++ +I +C+ G E+LE+ +++ + A
Sbjct: 234 KMGDFVKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDA 293
Query: 221 RAWEALL--LHSGSDL 234
+ AL+ L G DL
Sbjct: 294 FTYSALIHGLCEGGDL 309
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +I + ER +A + + +M + G KPD++ Y+ ++ G+ +G
Sbjct: 493 MSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGL-CQGK 551
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ D L + L G PD+ +N+ I+ LC KV A+Q+ M K C N+VT
Sbjct: 552 MNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVT 610
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NT++ + GD KA + ++ G++ ++ +Y I L+GL + +A L + L
Sbjct: 611 HNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDAL 670
Query: 178 KKCFYPRSSTFDNII 192
P T++ ++
Sbjct: 671 DNGVMPTVITWNILV 685
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +I L + AL + M++ ++V + ++ G GD K
Sbjct: 569 GFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVTHNTIMEGFYKIGDCEKA 627
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+++ ++ GL PD+ +YN+ +NGLC +V +A+ ++ + G P V+T N L+ A
Sbjct: 628 SKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNGVMPTVITWNILVRA 687
Query: 125 LCEAGD 130
+ G+
Sbjct: 688 VIFYGE 693
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G P + +I VK AL + ++M + G++PDV CY I++ G GD
Sbjct: 178 MWSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGD 237
Query: 61 YVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+VK +++ +L V + P V +YN+ I+GLC+ + E+++I + M K + T +
Sbjct: 238 FVKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYS 297
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ LCE GDL A+ V +EM L+GV+ ++ T ML+GL ++ E+ L EEM
Sbjct: 298 ALIHGLCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEM 354
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L G D Y+ +++G+ EG + ++ + M G + + YN I+
Sbjct: 416 ALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALID 475
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G K NKVD A+Q+ M GC PNVVT N ++ C A +A ++EM KG +
Sbjct: 476 GFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKP 535
Query: 149 NLHTYRIMLDGLV-GKAEIGEASLLL-EEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+L TY ++DGL GK + +L L + L K F P + + +I +C G + AL+
Sbjct: 536 DLITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQ 595
Query: 207 L 207
L
Sbjct: 596 L 596
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 48 YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI 107
Y I++ G+ G K + + G D + Y+ INGLC++ ++DEA ++++ M
Sbjct: 400 YGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRLDEAAKVLNLMD 459
Query: 108 KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
K GCK N N L+ + + A V +EM G N+ TY I+++G
Sbjct: 460 KRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCRAERFP 519
Query: 168 EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE---ALELMKKIVAKSFAP 218
EA +EEML+K + P T+ +I +CQ G +NE AL L + +AK F P
Sbjct: 520 EAYHCVEEMLEKGWKPDLITYSTLIDGLCQ-GKMNENDTALRLCYQFLAKGFKP 572
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + MI L + R ++L I +MK + K D Y+ ++ G+ GD ++
Sbjct: 256 PSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDGARKV 315
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++EM++ G+ DV T N +NGLCK KVDE+ ++ + M G + NVV+ N L L E
Sbjct: 316 YEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSR-NVVSYNVFLKGLFE 374
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + + V + + ++ TY I++ GL + +A +LE + +
Sbjct: 375 NGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFA 434
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C++G ++EA +++ + + A + AL+
Sbjct: 435 YSSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALI 474
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
+P + + +L+ + + ++ F G+ P V TYNV + LCK+ + +A +
Sbjct: 114 RPGIRSFNTLLNAFAESHQWDRAEKFFAYFETAGVEPSVQTYNVLMKVLCKKGEFLKAKK 173
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+V M +G KP+ T TL+ + DL+ A V EM +GVE ++ Y I++DG
Sbjct: 174 LVTWMWSVGMKPDKFTYGTLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFF 233
Query: 162 GKAEIGEASLLLEEMLK-KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ + ++ E +L+ + +P +++ +I +C+ G E+LE+ +++ + A
Sbjct: 234 KMGDFVKGKMMWERLLRVETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDA 293
Query: 221 RAWEALL--LHSGSDL 234
+ AL+ L G DL
Sbjct: 294 FTYSALIHGLCEGGDL 309
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ + +I + ER +A + + +M + G KPD++ Y+ ++ G+ +G
Sbjct: 493 MSTNGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGL-CQGK 551
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ D L + L G PD+ +N+ I+ LC KV A+Q+ M K C N+VT
Sbjct: 552 MNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVT 610
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NT++ + GD KA + ++ G++ ++ +Y I L+GL + +A L + L
Sbjct: 611 HNTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDAL 670
Query: 178 KKCFYPRSSTFDNII 192
P T++ ++
Sbjct: 671 DNGVMPTVITWNILV 685
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +I L + AL + M++ ++V + ++ G GD K
Sbjct: 569 GFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVTHNTIMEGFYKIGDCEKA 627
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+++ ++ GL PD+ +YN+ +NGLC +V +A+ ++ + G P V+T N L+ A
Sbjct: 628 SKIWAQISEDGLKPDIISYNITLNGLCTWGRVTDAVGFLNDALDNGVMPTVITWNILVRA 687
Query: 125 LCEAGD 130
+ G+
Sbjct: 688 VIFYGE 693
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + N+M + + PD+ Y I++ + + +LF++ML G +PD +TY +N
Sbjct: 201 AYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLN 260
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC++ K+ EA +++ M GC P++V NT++ C G A V+ +M G
Sbjct: 261 SLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLP 320
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
NL +YR +++GL + EA+ +EEML K F P + ++ C G I EA ++
Sbjct: 321 NLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVL 380
Query: 209 KKIVAKSFAPGARAW 223
K + AP W
Sbjct: 381 TKSLEHREAPHKDTW 395
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 101/199 (50%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + + G+ PD Y I++ GD LF++M ++PD+ +Y + +
Sbjct: 166 AFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQ 225
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC++++V+ A+ + + M+ G P+ T TLL +LC L +A ++ M +KG
Sbjct: 226 ALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 285
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ Y ++ G + +A ++++M P ++ ++ +C G+++EA + +
Sbjct: 286 DIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYV 345
Query: 209 KKIVAKSFAPGARAWEALL 227
+++++K F+P AL+
Sbjct: 346 EEMLSKGFSPHFAVIHALV 364
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P + + +++ L ++ + A+ + M G PD YT +L+ + +
Sbjct: 208 MFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKK 267
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L M V G PD+ YN I G C++ + +A +++D M GC PN+V+ T
Sbjct: 268 LREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRT 327
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G L +A ++EM KG + ++ G I EA +L + L+
Sbjct: 328 LVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHR 387
Query: 181 FYPRSSTFDNIICCMCQ 197
P T+ I+ +C+
Sbjct: 388 EAPHKDTWMIIVPQICE 404
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL-CKQNKVDEA 99
I P + Y I + G D K F ML + P N ++ L +N + A
Sbjct: 109 ITPTLFSYLIKIYGEANLPD--KALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYLRPA 166
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ K G P+ + N L+ A C GD+S A + +M + V ++ +YRI++
Sbjct: 167 FDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQA 226
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L K+++ A L E+ML K F P S T+ ++ +C+K + EA +L+ ++ K P
Sbjct: 227 LCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 286
Query: 220 ARAWEALLL 228
+ ++L
Sbjct: 287 IVHYNTVIL 295
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 106/199 (53%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L+QM + G+KP VV +++G+ EG+ + L EM G P+ YT+ +N
Sbjct: 126 AFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGALVN 185
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+ + M++ +PNVV N ++ C+ G +S+A + EM KGV+
Sbjct: 186 GLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKG 245
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L TY ++ G+ E +A LL EM++K P TF ++ C++GLI EA ++
Sbjct: 246 SLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVI 305
Query: 209 KKIVAKSFAPGARAWEALL 227
+V P + +L+
Sbjct: 306 SFMVQMGVEPNVVTYNSLI 324
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 104/191 (54%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + +M + G+K +V Y ++ G+ + G++ K L +EM+ G++PDV T+ + +
Sbjct: 230 EALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILV 289
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK+ + EA ++ M+++G +PNVVT N+L+G C ++ +A V + M LK
Sbjct: 290 DGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCL 349
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY ++ G ++ +A LL EM+ + YP T+ ++ C+ G A EL
Sbjct: 350 PSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKEL 409
Query: 208 MKKIVAKSFAP 218
+ P
Sbjct: 410 FFTMKQYGMVP 420
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V FT ++ KE ++A +++ M Q G++P+VV Y ++ G +
Sbjct: 273 MMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNE 332
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F M++ +P V TYN I+G CK VD+A+ +++ M+ G P+VVT T
Sbjct: 333 IDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTT 392
Query: 121 LLGALCEAGDLSKAKGV---MKEMGL--------------------------------KG 145
L+ CE G AK + MK+ G+
Sbjct: 393 LVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESD 452
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++L++ Y +M+DGL ++ +A +L +L K S TF+ +I +C+KGL+++A
Sbjct: 453 LDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAE 512
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
+L+ K+ P ++ +
Sbjct: 513 DLLMKMEENGCQPNKCSYNIFV 534
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ ++ L E A+ + +M+ G +P+ + +++G+ GD
Sbjct: 133 MFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGALVNGLCKIGD 192
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V +M+ P+V YN ++G CK V EA+ + M + G K ++VT N
Sbjct: 193 MVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVTYNC 252
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +C G+ KA ++ EM KGV ++ T+ I++DG + I EA ++ M++
Sbjct: 253 LIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMG 312
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++++I C I+EA+++ + +V K P + +L+
Sbjct: 313 VEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLI 359
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G+ P F ++ L K + A+ + M + +P+VV Y ++ G G
Sbjct: 168 MENAGYEPNGYTFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIMDGFCKGGF 227
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF EM G+ + TYN I G+C + +A +++ M++ G P+V T
Sbjct: 228 VSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTI 287
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKK 179
L+ C+ G + +AK V+ M GVE N+ TY ++ G EI EA + M LKK
Sbjct: 288 LVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKK 347
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C P T++++I C+ +++A+ L+ ++V + P W L+
Sbjct: 348 CL-PSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLV 394
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K + A+ +LN+M +G+ PDVV +T ++SG G + EL
Sbjct: 350 PSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKEL 409
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M G++P + T V ++GL K + EA+ + ++ + ++V N ++ LC+
Sbjct: 410 FFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCK 469
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L+ A+ V+ + +KG+ + +T+ IM+ GL K + +A LL +M + P +
Sbjct: 470 DGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGCQPNKCS 529
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
++ + + +K + + + ++ + K FA A E LL+ SD S+T
Sbjct: 530 YNIFVQGLLRKRDVLRSKKYLQIMKNKGFAVDATTTE-LLISIYSDDKESDT 580
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 83/158 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P ++ ++ L+K +A+ + +++ + D+V Y +++ G+ +G
Sbjct: 413 MKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGK 472
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +LV GL D YT+N+ I GLC++ +D+A ++ M + GC+PN + N
Sbjct: 473 LNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGCQPNKCSYNI 532
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
+ L D+ ++K ++ M KG ++ T +++
Sbjct: 533 FVQGLLRKRDVLRSKKYLQIMKNKGFAVDATTTELLIS 570
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 71/161 (44%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
F +ML L +P++ +N+ + K I ++ + T N ++ LC
Sbjct: 59 FFHQMLTLKPLPNIKDFNLLFTFITKTKNYTTTISLIKHAHSFNINADTYTLNIVINCLC 118
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
G A V+ +M G++ + T +++GL + + A L EM + P
Sbjct: 119 HLGHTKFAFSVLSQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGY 178
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++ +C+ G + A+ ++ +V +++ P + A++
Sbjct: 179 TFGALVNGLCKIGDMVSAVGCIRDMVERNYEPNVVVYNAIM 219
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ +T +IR E +A L M++ G++P++ Y ++ G G+
Sbjct: 149 MIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGN 208
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ E++ +ML GL PDV T+ + ++ LCK ++ A M K G PN+ N
Sbjct: 209 VKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNC 268
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+AGDL +A + EM GV ++ T I++ GL EA L+EEM K
Sbjct: 269 LIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAG 328
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + T++ +I C+ G + +A+E+ ++ + P + L+
Sbjct: 329 VFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLI 375
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + + +I K I + M ++G+ PDVV + I++ + GD
Sbjct: 184 MRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGD 243
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
F M G+ P++Y YN I+G CK + EA+++ D M + G +V TC+
Sbjct: 244 LEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSI 303
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC++G +AK +M+EM GV N TY ++DG ++ +A + +M ++
Sbjct: 304 LVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERK 363
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +I C+KG + A+ L ++V K P + AL+
Sbjct: 364 IEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALI 410
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + ++M Q GI P+VV YT ++ EGD + + M G+ P++YTY I
Sbjct: 141 NARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLI 200
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK V +I M++ G P+VVT L+ LC+ GDL A+ M GV
Sbjct: 201 DGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVF 260
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC------MCQKGLI 201
NL+ Y ++DG ++ EA L +EM R+ F ++ C +C G
Sbjct: 261 PNLYVYNCLIDGYCKAGDLVEAMRLRDEM------ERNGVFGDVFTCSILVKGLCDSGRF 314
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
EA LM+++ A + A++
Sbjct: 315 EEAKNLMEEMEKAGVFANAVTYNAVI 340
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ F ++ L K A M + G+ P++ Y ++ G GD
Sbjct: 219 MLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDKFGVFPNLYVYNCLIDGYCKAGD 278
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V+ L DEM G+ DV+T ++ + GLC + +EA +++ M K G N VT N
Sbjct: 279 LVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNA 338
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ GD+ KA V +M + +E N+ T+ ++DG K + A L EM+ K
Sbjct: 339 VIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKG 398
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I C+ A EL K+++ P +L+
Sbjct: 399 LVPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLI 445
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + +QM + I+P+V+ ++ ++ G +G+ L+ EM++ GL+PDV TY I+
Sbjct: 352 AIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALID 411
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK------EMG 142
G CK A ++ M++ G PNVVT +L+ L + G K G +K E+G
Sbjct: 412 GHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEG---KTYGAIKLFLEKTEVG 468
Query: 143 LKGVELNLHT---------YRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
G + + H+ Y ++ GL I +A+ ++M F P
Sbjct: 469 SPGGKTD-HSGVCSPNEVMYAALIQGLCKDGRIFKATKFFKDMRCSGFKP 517
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F+ +I K+ A+ + +M G+ PDVV YT ++ G + EL
Sbjct: 366 PNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFEL 425
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-----------CKPNVV 116
EM+ GL P+V T I+GL K+ K AI++ ++G C PN V
Sbjct: 426 HKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVGSPGGKTDHSGVCSPNEV 485
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ LC+ G + KA K+M G + ++ Y IML+ + + +L +M
Sbjct: 486 MYAALIQGLCKDGRIFKATKFFKDMRCSGFKPDMVLYVIMLEAHFRFKHMFDVMMLHADM 545
Query: 177 LK 178
LK
Sbjct: 546 LK 547
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G V + +++ L R +A ++ +M++ G+ + V Y V+ G GD
Sbjct: 289 MERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFANAVTYNAVIDGYCKMGD 348
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ +M + P+V T++ I+G CK+ + A+ + M+ G P+VVT
Sbjct: 349 MEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIEMVIKGLVPDVVTYTA 408
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEM--- 176
L+ C+ + A + KEM G+ N+ T ++DGL+ + + G L LE+
Sbjct: 409 LIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGLLKEGKTYGAIKLFLEKTEVG 468
Query: 177 -------LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P + +I +C+ G I +A + K + F P
Sbjct: 469 SPGGKTDHSGVCSPNEVMYAALIQGLCKDGRIFKATKFFKDMRCSGFKP 517
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 88/226 (38%), Gaps = 4/226 (1%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
FC ++ F+ ++K R + L N+ K + + + K
Sbjct: 10 FCQELLSFSASSNAMLKLLRRKNILITFNKNLSSITKSTSFSSNSFIKNTNTKNNITKTT 69
Query: 66 ELFDEMLVLG----LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
L + L + +P + N ++ L K K D + ++++ G P ++T L
Sbjct: 70 SLKKQHLHISNKPTTLPSLRECNALLHSLVKSKKFDSVWSVYNNLLSRGLLPTLITYGIL 129
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L C GD S A+ V EM +G+ N+ Y ++ + ++ EA L+ M +
Sbjct: 130 LNCCCNQGDFSNARKVFDEMIQRGIVPNVVVYTTLIRVFCNEGDMDEAERFLKLMRESGV 189
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +I C+ G + E+ ++ P + L+
Sbjct: 190 EPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRNGLHPDVVTFAILV 235
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ ++ +I L K++ DA + ++M I P VV ++ ++ G G + LF
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF 251
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+EM++ + PD YT+N+ ++ LCK+ K+ EA ++ M+K G +P VVT NTL+ C
Sbjct: 252 NEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLV 311
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
++ KAK V+ + V N +Y IM++G + EA L EM + P T+
Sbjct: 312 NEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTY 371
Query: 189 DNIICCMCQKGLINEALELMKKI 211
+++I +C+ G I A EL+ ++
Sbjct: 372 NSLIDGLCKAGRIPYAWELVDEM 394
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++ P + MI K + +AL + ++M GI P V Y ++ G+ G
Sbjct: 324 ISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGR 383
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM + D+ TYN I+ CK VD+AI +V + + G +PN+ T N
Sbjct: 384 IPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNI 443
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ V +++ +KG +N TY IM++GL + EA +LL +M
Sbjct: 444 LIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNG 503
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ II + K +A +L++++V K
Sbjct: 504 IIPDAVTYETIIQALFHKDENEKAQKLLREMVIK 537
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 114/224 (50%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K + AL +L Q++ + +VV Y+ ++ G+ +
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L+ EM+V + P V T++ I G C K +A ++ + M+ P+ T N L+
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +AK V+ M +GVE + TY ++DG E+G+A +L + + P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
S +++ +I C+ +++EAL L ++ + AP + +L+
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 35/255 (13%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI-----VAEGDYV 62
P F ++ L KE + +A ++ M ++G++P VV Y ++ G V + +V
Sbjct: 261 PDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV 320
Query: 63 ---------------------------KLDE---LFDEMLVLGLIPDVYTYNVYINGLCK 92
+DE LF EM G+ P TYN I+GLCK
Sbjct: 321 LSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCK 380
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
++ A ++VD M ++VT N+L+ C+ + KA ++K++ G++ N+ T
Sbjct: 381 AGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCT 440
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
Y I++DGL ++ A + +++L K + + T++ +I +C++GL +EA L+ K+
Sbjct: 441 YNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME 500
Query: 213 AKSFAPGARAWEALL 227
P A +E ++
Sbjct: 501 DNGIIPDAVTYETII 515
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F+ +I + DA + N+M I PD + I++ + EG + +
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNV 285
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ P V TYN ++G C N+V +A ++ + ++ PN + N ++ C+
Sbjct: 286 IAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCK 345
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + EM +G+ + TY ++DGL I A L++EM C T
Sbjct: 346 IKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVT 405
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLF 245
++++I C+ +++A+ L+KKI P + L+ L G L ++ F L
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 117/249 (46%), Gaps = 22/249 (8%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN-QMKQDGIKPDVVCYTIVLS------ 53
MR++ P +++F ++ +L+K + + L+ QM+ G+KPD+ +I+++
Sbjct: 57 MRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLG 116
Query: 54 ---------------GIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
G+ G + D +L LG + TY + INGLCK +
Sbjct: 117 QMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRA 176
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A+Q++ + NVV +T++ LC+ ++ A G+ EM +K + + T+ ++
Sbjct: 177 ALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIY 236
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
G + +A L EM+ K P + TF+ ++ +C++G I EA ++ ++ + P
Sbjct: 237 GFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
Query: 219 GARAWEALL 227
+ L+
Sbjct: 297 TVVTYNTLM 305
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 78/137 (56%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
++ + +I K + A+ ++ ++K+ GI+P++ Y I++ G+ G ++F
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
++L+ G + +TYN+ INGLCK+ DEA ++ M G P+ VT T++ AL
Sbjct: 463 DLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKD 522
Query: 130 DLSKAKGVMKEMGLKGV 146
+ KA+ +++EM +KG+
Sbjct: 523 ENEKAQKLLREMVIKGL 539
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 127/251 (50%), Gaps = 22/251 (8%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G + + + L++ + ++ +L++M ++GI+P++ Y IV+ G+
Sbjct: 319 MKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHM 378
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L D M+ G+ PD TY ++G C + KV EA I++ MI+ GC PN TCNT
Sbjct: 379 MLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNT 438
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-- 178
LL +L + G S+A+ ++++M K +L+ T I+++GL E+ +AS ++ EM
Sbjct: 439 LLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG 498
Query: 179 --------------------KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P T+ +I +C+ G + EA + +++AK+ P
Sbjct: 499 TNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHP 558
Query: 219 GARAWEALLLH 229
+ ++ +L+
Sbjct: 559 DSVTYDTFVLN 569
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 22/250 (8%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ L + +DA +++ M +G+ PD V YT +L G ++G +
Sbjct: 358 GIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEA 417
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +EM+ G P+ YT N +N L K+ + EA +++ M + + + VTCN ++
Sbjct: 418 KAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNG 477
Query: 125 LCEAGDLSKAKGVMKEMGLKGVEL------------NLH----------TYRIMLDGLVG 162
LC G+L KA V+ EM G ++H TY +++GL
Sbjct: 478 LCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCK 537
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
++ EA EM+ K +P S T+D + C++G I+ AL ++K + + +
Sbjct: 538 VGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQT 597
Query: 223 WEALLLHSGS 232
+ +L+L GS
Sbjct: 598 YNSLILGLGS 607
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 23/250 (9%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ L KE R +A +L +M + + D V IV++G+ G+
Sbjct: 424 MIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGE 483
Query: 61 YVKLDELFDEMLVLGL----------------------IPDVYTYNVYINGLCKQNKVDE 98
K E+ EM G +PDV TY INGLCK K++E
Sbjct: 484 LEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEE 543
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A + M+ P+ VT +T + C+ G +S A V+K+M G L TY ++
Sbjct: 544 AKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLIL 603
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS-FA 217
GL K +I E L++EM ++ +P T++N+I C+C+ G +A L+ +++ K +
Sbjct: 604 GLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVS 663
Query: 218 PGARAWEALL 227
P +++ L+
Sbjct: 664 PNVSSFKILI 673
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 4/220 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG----IKPDVVCYTIVLSGIV 56
M + G P V+ F I L + + +A I M+ DG KP+VV + ++L G
Sbjct: 245 MTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFC 304
Query: 57 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
EG + L + M G + +YN ++ GL + K+ E ++D M++ G +PN+
Sbjct: 305 QEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIY 364
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ N ++ LC + A+ +M M GV + TY +L G K ++ EA +L EM
Sbjct: 365 SYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM 424
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++K +P + T + ++ + ++G +EA E+++K+ KS+
Sbjct: 425 IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSY 464
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 112/204 (54%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F M++ +E +A ++ MK+ G + Y L G++ G ++ +
Sbjct: 291 PNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSV 350
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM+ G+ P++Y+YN+ ++GLC+ + + +A +++D M+ G P+ VT TLL C
Sbjct: 351 LDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCS 410
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +AK ++ EM KG N +T +L+ L + EA +L++M +K + + T
Sbjct: 411 KGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVT 470
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
+ ++ +C+ G + +A E++ ++
Sbjct: 471 CNIVVNGLCRNGELEKASEVVSEM 494
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ ++ K++ +A ++ +M + G+ PDVV + +S + G + +F +M
Sbjct: 222 YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQ 281
Query: 73 VLGLI----PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
+ G + P+V T+N+ + G C++ ++EA +V++M K G ++ + NT L L
Sbjct: 282 MDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRN 341
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G L + + V+ EM G+E N+++Y I++DGL + +A L++ M+ YP + T+
Sbjct: 342 GKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTY 401
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ C KG + EA ++ +++ K P LL
Sbjct: 402 TTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLL 440
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
PDV+ YT +++G+ G + + F EM+ L PD TY+ ++ CKQ K+ A+++
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRV 582
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
+ M + GC + T N+L+ L G + + G+M EM +G+ ++ TY M++ L
Sbjct: 583 LKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCE 642
Query: 163 KAEIGEASLLLEEMLKK-CFYPRSSTFDNIICCMCQKGLINEALEL 207
+ +A+ LL EML K P S+F +I C+ G A EL
Sbjct: 643 GGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACEL 688
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L+ +M+ G+ P+ YT+N+ I LC+ N +D A ++ D M + GC+PN T L+ C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
AG +A + G G +N Y ++ + EA L+E M +K P
Sbjct: 198 RAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255
Query: 187 TFDNIICCMCQKGLINEALELMK 209
TF++ I +C+ G + EA + +
Sbjct: 256 TFNSRISALCRAGKVFEASRIFR 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 18 RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI 77
R +++ R + M Q G+ P+ + +++ + ELFD+M G
Sbjct: 124 RSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQ 183
Query: 78 PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGV 137
P+ +T + + G C+ + +A++ VD K+G N V NTL+ + C+ +A+ +
Sbjct: 184 PNKFTVGILVRGFCRAGRTKQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKL 241
Query: 138 MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-------LKKCFYPRSSTFDN 190
++ M KG+ ++ T+ + L ++ EAS + +M L K P TF+
Sbjct: 242 VERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPK---PNVVTFNL 298
Query: 191 IICCMCQKGLINEA---LELMKK 210
++ CQ+G++ EA +E MKK
Sbjct: 299 MLKGFCQEGMMEEARSLVETMKK 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEG 59
MR+ G P + + +MI L + + DA +L++M G+ P+V + I++ G
Sbjct: 621 MRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSG 680
Query: 60 DYVKLDELFDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
D+ ELFD L V G +Y+ + N L K+ +A ++ ++ ++
Sbjct: 681 DFKVACELFDVALSVCGHKEALYS--LMFNELLAGGKLSDAKELFEASLERSLLSKNFMY 738
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
L+ LC+ G L A G+++++ KG + ++ ++DGL + +A L
Sbjct: 739 EDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P + ++ ++ F VKE A Y+ N + + G+ DV Y+++++G
Sbjct: 291 MIKQGVEPNIATYSSLMDGCFSVKEVN--KATYVFNTIARRGVALDVQSYSVMINGFCKN 348
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF EM ++P+ TYN I+GLCK ++ +A +D M G N++T
Sbjct: 349 KMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITY 408
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++LL LC+ + KA ++ ++ +G++L+++TY I++DGL ++ +A + + +L
Sbjct: 409 SSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLN 468
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ + + +I +C++G +EAL L+ K+ P +E ++
Sbjct: 469 NTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEIII 517
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L +++ +KPDVV Y ++ + +
Sbjct: 155 GFYLNEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDG 214
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L+ EM+V + PD TYN I G ++ EA+ +++ M PNV T + L+
Sbjct: 215 YDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDV 274
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G++ KA+ V+ M +GVE N+ TY ++DG E+ +A+ + + ++
Sbjct: 275 LCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALD 334
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ +++EA+ L K++ +K+ P + +L+
Sbjct: 335 VQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLI 377
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F+ +I L K+ A +L M + G++P++ Y+ ++ G + + K +
Sbjct: 263 PNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYV 322
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ + G+ DV +Y+V ING CK VDEA+ + M PN VT N+L+ LC+
Sbjct: 323 FNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCK 382
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +S A + EM +G N+ TY +LDGL ++ +A LL ++ + T
Sbjct: 383 LGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYT 442
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +C+ G + +A E+ + ++ ++ AR + ++
Sbjct: 443 YTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMI 482
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 115/220 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I L K++ D + ++M I PD + Y ++ G G + L
Sbjct: 193 PDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGL 252
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M + + P+VYT+++ I+ LCK +V +A ++ MIK G +PN+ T ++L+
Sbjct: 253 LNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFS 312
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KA V + +GV L++ +Y +M++G + EA L +EM K P + T
Sbjct: 313 VKEVNKATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVT 372
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I +C+ G +++A + + ++ + + +LL
Sbjct: 373 YNSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLL 412
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQ 101
P + + +LS + A+ ++ + F + + L I PD++T ++ IN C N+++ A
Sbjct: 53 PPIFEFNKILSSL-AKLNHFNIAISFSQQMELKPIQPDIFTLSILINCFCHLNQLNYAFS 111
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
I+ ++KLG +PN VT TL+ LC G++ KA ++ KG LN +Y +++GL
Sbjct: 112 ILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLC 171
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
E A LL ++ P ++ II +C+ L+++ +L +++ K P A
Sbjct: 172 KSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAI 231
Query: 222 AWEALL 227
+ L+
Sbjct: 232 TYNTLI 237
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 105/212 (49%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ G V ++ MI K + +A+ + +M + P+ V Y ++ G+ G
Sbjct: 328 RRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRMS 387
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ DEM G ++ TY+ ++GLCK ++VD+AI ++ + G + ++ T L+
Sbjct: 388 DAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILV 447
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A+ V + + L+ Y +M++GL + EA LL +M
Sbjct: 448 DGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCT 507
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T++ II + + ++A++L+++++A+
Sbjct: 508 PDGVTYEIIIRALFENNRNDKAVKLIREMIAR 539
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A IL ++ + G +P+ V T ++ G+ G+ K ++++ G + +Y IN
Sbjct: 109 AFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLIN 168
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + A+ ++ + KP+VV NT++ +LC+ +S + EM +K +
Sbjct: 169 GLCKSGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYP 228
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ TY ++ G ++ EA LL M K P TF +I +C+ G + +A ++
Sbjct: 229 DAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILIDVLCKDGEVKKARNVL 288
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 289 AVMIKQGVEPNIATYSSLM 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 102/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +F ++ L K A+ QM+ I+PD+ +I+++ +
Sbjct: 53 PPIFEFNKILSSLAKLNHFNIAISFSQQMELKPIQPDIFTLSILINCFCHLNQLNYAFSI 112
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++L LG P+ T I GLC +V +A+ + +I G N V+ TL+ LC+
Sbjct: 113 LGKILKLGYEPNTVTLTTLIKGLCLNGEVRKALYFHNDVIAKGFYLNEVSYGTLINGLCK 172
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G+ A +++++ V+ ++ Y ++D L + + L EM+ K YP + T
Sbjct: 173 SGETKAALSLLRKIEGSLVKPDVVMYNTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAIT 232
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I G + EA+ L+ ++ K+ P + L+
Sbjct: 233 YNTLIYGFSILGQMKEAVGLLNRMTLKNVNPNVYTFSILI 272
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ ++ ++ L K + A+ +L ++K GI+ D+ YTI++ G+ G
Sbjct: 396 MHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDGLCKNGK 455
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++ +L D Y V INGLCK+ DEA+ ++ M GC P+ VT
Sbjct: 456 LRDAQEVYQVLLNNTYHLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCTPDGVTYEI 515
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL E KA +++EM +G+
Sbjct: 516 IIRALFENNRNDKAVKLIREMIARGL 541
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 105/199 (52%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A Y+L M + ++PD+V Y+ ++ G + K LF+ + + G+ P+V++YN+ IN
Sbjct: 269 ARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMIN 328
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK VDEA+ + M PN VT N+L+ LC+ G +S + EM +G
Sbjct: 329 GLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPT 388
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY + DGL ++ A LL+++ + P ++ + +C+ G + +A E+
Sbjct: 389 DIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVY 448
Query: 209 KKIVAKSFAPGARAWEALL 227
+ + K + A+ + ++
Sbjct: 449 RDLTIKGYHLDAKMYTVMI 467
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 8 PGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P ++ ++ ++ FLVKE A ++ N + G+ P+V Y I+++G+ +
Sbjct: 283 PDIVTYSSLMDGYFLVKEVN--KAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAV 340
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
LF EM +IP+ TYN I+GLCK +V + +D M G +++T N+L L
Sbjct: 341 NLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGL 400
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ + +A ++K++ +G++ ++++Y I+ GL + +A + ++ K ++ +
Sbjct: 401 CKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDA 460
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C++G +EAL L+ K+ P +E ++
Sbjct: 461 KMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIII 502
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + MI L K + +A+ + +M + P+ V Y ++ G+ G +
Sbjct: 315 GVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDV 374
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ DEM G D+ TYN +GLCK ++VD AI ++ + G +P++ + L
Sbjct: 375 WDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A+ V +++ +KG L+ Y +M++GL + EA LL +M P
Sbjct: 435 LCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPD 494
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
T++ II + + ++A++ +++++A+
Sbjct: 495 GVTYEIIIRALFESDRNDKAVKFIREMIAR 524
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + T +I L + ALY + + G + V Y I+++G+ G+
Sbjct: 131 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 190
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL- 121
+L +++ + PDV YN I+ LCK V + + MI PNV+T NTL
Sbjct: 191 AALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLI 250
Query: 122 -----LGALCEA-GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
LG + EA G++ KA+ V+ M + VE ++ TY ++DG E+ +A L
Sbjct: 251 YGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNT 310
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + P +++ +I +C+ +++EA+ L K++ +K P + +L+
Sbjct: 311 LSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLI 362
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 7/214 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L ++K +KPDVV Y ++ + +
Sbjct: 168 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDG 227
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-------QIVDSMIKLGCKPNVVT 117
+L+ EM+V + P+V TYN I G ++ EA+ ++ MIK +P++VT
Sbjct: 228 YDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVT 287
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++L+ +++KAK + + L+GV N+ +Y IM++GL + EA L +EM
Sbjct: 288 YSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMH 347
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
K P + T++++I +C+ G +++ + + ++
Sbjct: 348 SKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEM 381
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ N++ P V + +LS +V + +M + G+ PD+ T ++ I
Sbjct: 52 DAVSSFNRILHISSTP-VFEFGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILI 110
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C N+++ A I+ ++KLG +PN VT TL+ LC G + KA + KG
Sbjct: 111 NSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFH 170
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
LN +Y I+++GL E A LLE++ P ++ II +C+ L+++ +L
Sbjct: 171 LNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDL 230
Query: 208 MKKIVAKSFAPGARAWEALL 227
+++ P + L+
Sbjct: 231 YSEMIVNKIHPNVITYNTLI 250
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 3 KLGFCPGVMDF----------TDMIRF------LVKEERGMDALYILNQMKQDGIKPDVV 46
KLG V DF TD+I + L K + A+ +L ++K GI+P +
Sbjct: 367 KLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMY 426
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
YTI+ G+ G E++ ++ + G D Y V INGLCK+ DEA+ ++ M
Sbjct: 427 SYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKM 486
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
GC P+ VT ++ AL E+ KA ++EM +G+
Sbjct: 487 KDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 75/179 (41%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L K R D +++M G D++ Y + G+
Sbjct: 346 MHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQ 405
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L ++ G+ P +Y+Y + GLCK ++++A ++ + G +
Sbjct: 406 VDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTV 465
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC+ G +A ++ +M G + TY I++ L +A + EM+ +
Sbjct: 466 MINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIAR 524
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 105/199 (52%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A Y+L M + ++PD+V Y+ ++ G + K LF+ + + G+ P+V++YN+ IN
Sbjct: 269 ARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMIN 328
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK VDEA+ + M PN VT N+L+ LC+ G +S + EM +G
Sbjct: 329 GLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPT 388
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY + DGL ++ A LL+++ + P ++ + +C+ G + +A E+
Sbjct: 389 DIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVY 448
Query: 209 KKIVAKSFAPGARAWEALL 227
+ + K + A+ + ++
Sbjct: 449 RDLTIKGYHLDAKMYTVMI 467
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 116/222 (52%), Gaps = 4/222 (1%)
Query: 8 PGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P ++ ++ ++ FLVKE A ++ N + G+ P+V Y I+++G+ +
Sbjct: 283 PDIVTYSSLMDGYFLVKEVN--KAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAV 340
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
LF EM +IP+ TYN I+GLCK +V + +D M G +++T N+L L
Sbjct: 341 NLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGL 400
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ + +A ++K++ +G++ ++++Y I+ GL + +A + ++ K ++ +
Sbjct: 401 CKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDA 460
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C++G +EAL L+ K+ P +E ++
Sbjct: 461 KMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIII 502
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + MI L K + +A+ + +M + P+ V Y ++ G+ G +
Sbjct: 315 GVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDV 374
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ DEM G D+ TYN +GLCK ++VD AI ++ + G +P++ + L
Sbjct: 375 WDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A+ V +++ +KG L+ Y +M++GL + EA LL +M P
Sbjct: 435 LCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPD 494
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
T++ II + + ++A++ +++++A+
Sbjct: 495 GVTYEIIIRALFESDRNDKAVKFIREMIAR 524
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 115/232 (49%), Gaps = 7/232 (3%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG+ P + T +I L + ALY + + G + V Y I+++G+ G+
Sbjct: 131 KLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFHLNHVSYGILINGLCKSGETK 190
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL- 121
+L +++ + PDV YN I+ LCK V + + MI PNV+T NTL
Sbjct: 191 AALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLI 250
Query: 122 -----LGALCEA-GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
LG + EA G++ KA+ V+ M + VE ++ TY ++DG E+ +A L
Sbjct: 251 YGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNT 310
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + P +++ +I +C+ +++EA+ L K++ +K P + +L+
Sbjct: 311 LSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLI 362
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 7/214 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + + +I L K AL +L ++K +KPDVV Y ++ + +
Sbjct: 168 GFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDG 227
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-------QIVDSMIKLGCKPNVVT 117
+L+ EM+V + P+V TYN I G ++ EA+ ++ MIK +P++VT
Sbjct: 228 YDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVT 287
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++L+ +++KAK + + L+GV N+ +Y IM++GL + EA L +EM
Sbjct: 288 YSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMH 347
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
K P + T++++I +C+ G +++ + + ++
Sbjct: 348 SKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEM 381
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ N++ P V + +LS +V + +M + G+ PD+ T ++ I
Sbjct: 52 DAVSSFNRILHISSTP-VFEFGKILSSLVKLNQFNTAVSFSHQMELKGIQPDIVTLSILI 110
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C N+++ A I+ ++KLG +PN VT TL+ LC G + KA + KG
Sbjct: 111 NSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKALYFHDHVIAKGFH 170
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
LN +Y I+++GL E A LLE++ P ++ II +C+ L+++ +L
Sbjct: 171 LNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDL 230
Query: 208 MKKIVAKSFAPGARAWEALL 227
+++ P + L+
Sbjct: 231 YSEMIVNKIHPNVITYNTLI 250
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 3 KLGFCPGVMDF----------TDMIRF------LVKEERGMDALYILNQMKQDGIKPDVV 46
KLG V DF TD+I + L K + A+ +L ++K GI+P +
Sbjct: 367 KLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMY 426
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
YTI+ G+ G E++ ++ + G D Y V INGLCK+ DEA+ ++ M
Sbjct: 427 SYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKM 486
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
GC P+ VT ++ AL E+ KA ++EM +G+
Sbjct: 487 KDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 75/179 (41%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L K R D +++M G D++ Y + G+
Sbjct: 346 MHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPTDIITYNSLFDGLCKNHQ 405
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L ++ G+ P +Y+Y + GLCK ++++A ++ + G +
Sbjct: 406 VDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTV 465
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ LC+ G +A ++ +M G + TY I++ L +A + EM+ +
Sbjct: 466 MINGLCKEGFFDEALSLLSKMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIAR 524
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
+ +T++I + + +AL + QMK+DG PDV YT++++ G + + F+E
Sbjct: 261 VSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEE 320
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M+ G+ P+VYTY V I+ CK K+DE ++++ +M++ G +VV N L+ C+ G
Sbjct: 321 MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGM 380
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ A V+ M L V N TY ++ G K + A LL +M + P T++
Sbjct: 381 MEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNT 440
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I +C+ +++ A L ++ F P R + A +
Sbjct: 441 LIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFI 477
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K GFC +T +I K DA + M Q+G + V YT ++ G G
Sbjct: 218 KFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKID 277
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ ELF +M G PDV TY V + C+ K EA++ + M++ G +PNV T L+
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ G + + ++ M KG+ ++ + ++DG + + +A +L+ M
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC 397
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S T++ +IC C+K ++ A+ L+ K+ +P + L+
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P V +T ++ + + +AL +M ++GI+P+V YT+++ G
Sbjct: 286 MKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGK 345
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+ ML GL+ V +N I+G CK+ +++AI ++DSM PN T N
Sbjct: 346 MDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNE 405
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + +A ++ +M + NL TY ++ GL + A L M+K
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL-------LHSGSD 233
F P TF I C+C+ G + +A ++ + + K + AL+ S +
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525
Query: 234 LTYSETTFAGLF 245
L + F G F
Sbjct: 526 LLFKRMLFEGCF 537
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M + G V+ F +I K RGM DA+ +L+ MK + + P+ Y ++ G +
Sbjct: 356 MLEKGLVSSVVPFNALIDGYCK--RGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRK 413
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ L ++M L P++ TYN I+GLCK VD A ++ MIK G P+ T
Sbjct: 414 KSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+ LC+ G + +A V + + K E N Y ++DG + +A LL + ML
Sbjct: 474 CAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLF 533
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +P S TF+ ++ + ++G + +A+ L+ + P + L+
Sbjct: 534 EGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI 582
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
CP + ++I +++ A+ +LN+M ++ + P++V Y ++ G+
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR 456
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS--------------------- 105
L M+ G +PD T+ +I+ LCK KV++A Q+ +S
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYC 516
Query: 106 --------------MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
M+ GC PN +T N LL L + G + A ++ MG + +H
Sbjct: 517 KAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVH 576
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY I+++ ++ +++ A++ L++M+ P T+ I C++G + EA E++ KI
Sbjct: 577 TYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKI 636
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 35/231 (15%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSG-------IVAEG----------------------DYV 62
+ M DG++P+++ + +++ +VA+ Y
Sbjct: 177 LFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYC 236
Query: 63 KLDELFDEMLVLGLIP------DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K+ EL D V ++P + +Y I+G C+ K+DEA+++ M + GC P+V
Sbjct: 237 KIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVP 296
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T L+ A CE G ++A +EM G+E N++TY +++D ++ E +L M
Sbjct: 297 TYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM 356
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L+K F+ +I C++G++ +A+ ++ + P +R + L+
Sbjct: 357 LEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 26/249 (10%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + F ++ L KE + DA+ +++ M + KP V YTI++ I+ E D+ +
Sbjct: 535 GCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRA 594
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ D+M+ G P+V TY +I C+Q ++ EA ++V + + G + + L+ A
Sbjct: 595 NMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNA 654
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK--------------------- 163
G L A GV+ M G E + TY I+L L+ +
Sbjct: 655 YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNA 714
Query: 164 -----AEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
A+ ++L E+M+++ P +T+ +I +C+ ++ A L + +P
Sbjct: 715 NIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISP 774
Query: 219 GARAWEALL 227
+LL
Sbjct: 775 SENIHNSLL 783
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K GF P F I L K + A + +K+ + + YT ++ G
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ LF ML G P+ T+NV ++GL K+ KV++A+ +VD M K KP V T
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI 580
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + D +A + +M G + N+ TY + + + EA ++ ++ ++
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
S +D ++ G ++ A ++ ++ P + + LL H
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKH 689
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A ++LN + V Y + + G +L+ LF +ML G+ P++ ++N +
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N CK V A ++K G + T +L+ C+ +L A V + M +G
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N +Y ++ G +I EA L +M + +P T+ ++ C+ G EAL+
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317
Query: 208 MKKIVAKSFAPGARAWEALL 227
+++V P + L+
Sbjct: 318 FEEMVENGIEPNVYTYTVLI 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +M + G P+V Y+ ++ G+ LF+ M G+ P +N ++ C
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K +EA++++DSM++ ++ + L+ L E G+ KA+ + + + G +
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLK 178
++++LDGLV K + E S L + M K
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEK 874
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 32/249 (12%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T I+ ++ R ++A ++ ++K++GI D Y ++++ A G +LD
Sbjct: 608 PNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN---AYGCIGQLDSA 664
Query: 68 FD---EMLVLGLIPDVYTYNVYINGLC--KQNK-------------VDEA---------- 99
F M G P TY++ + L K NK VD A
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724
Query: 100 -IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
+ + M++ GC PNV T + L+ LC+ LS A + M G+ + + + +L
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
EA LL+ M++ ++ ++C + ++G +A E+ + +++ +
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844
Query: 219 GARAWEALL 227
W+ LL
Sbjct: 845 DEVVWKVLL 853
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAE--------------------------GDY 61
A +L +M G +P Y+I+L ++ E D+
Sbjct: 663 SAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADF 722
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ LF++M+ G +P+V TY+ I GLCK + A ++ + M + G P+ N+L
Sbjct: 723 EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSL 782
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L + C+ G +A ++ M +L +Y++++ GL + +A + +L +
Sbjct: 783 LSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGY 842
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+ ++ + +KG ++E +L + I+ K+
Sbjct: 843 NYDEVVWKVLLDGLVRKGYVDECSQL-RDIMEKT 875
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V ++ +I+ L K E A + N MK+ GI P + +LS G
Sbjct: 732 MVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGM 791
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L D M+ + + +Y + + GL +Q ++A +I S++ G + V
Sbjct: 792 HEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKV 851
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
LL L G + + + M G L+ T+ ++ L G
Sbjct: 852 LLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQELNG 893
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL L++M + G +P+V+ YTI++ G +G + +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + M GL + YN I LCK K+ +A+Q+ M GCKP++ T N+L+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML------------DGLVGKAEIGEASL- 171
LC+ + +A G+ ++M L+GV N TY ++ D LVG+ L
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 172 ----------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
L+E+M + +P ++ + +I C+ G +N+AL+ ++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 607 DMIQRGLTPDIVTYNSLI 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ V Y +++G V G + + D L+ M++ G PD +T+N+ I+GLCK+ + A++
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+D M+K G +PNV+T L+ C+ G +A V+ M KG+ LN Y ++ L
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+I +A + EM K P TF+++I +C+ + EAL L + ++ +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513
Query: 222 AWEALL 227
+ L+
Sbjct: 514 TYNTLI 519
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + M +G+ + V Y ++ +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+L EM G D TYN I LCK ++ + +++ M P++ +CN
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C G ++ A +++M +G+ ++ TY +++GL EA L + K
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++ +I C +GL N+A +L+ K V+ F P W L+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K+ + DAL + +M G KPD+ + ++ G+
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ +ML+ G+I + TYN I+ + + +A ++V M GC + +T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ G K G++++M + + ++++ I+++ ++ +A L +M+++
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++++I +C+ G EAL L + AK P A + L+ S
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI---------SRYC 663
Query: 241 FAGLFN 246
+ GLFN
Sbjct: 664 YEGLFN 669
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +++ A +L M + G P+ + Y +++ +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
+ +L +EM ++G PDV T+N I+GLCK ++ EA ++ D M+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 108 ------KLG------------CKPNVVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVEL 148
++G PN V NTL+ +G +AK ++ K M + G E
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ IM+DGL K + A L+EM+KK F P T+ +I C++G EA +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KKIVAKSFAPGARAWEALL 227
+ AK + + L+
Sbjct: 431 NSMSAKGLSLNTVGYNCLI 449
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+P Y +VL +VA +F +ML G+ P VYT+ V + C N+VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ M K GC PN + L+ AL E +++A +++EM L G E ++ T+ ++ GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
I EA+ L + ML + F + ++ +C+ G ++EA ++ KI P
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336
Query: 221 RAWEALL--------LHSGSDLTYSETTFAGL 244
+ L+ DL Y AG
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + ++ LV A + M GI P V + +V+ +
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M G +P+ Y + I+ L + N+V+EA+++++ M +GC+P+V T N ++ L
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 126 CEAGDLSKAKGVMKEMGLKGVEL-------------------------------NLHTYR 154
C+AG + +A + M L+ N Y
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 155 IMLDGLVGKAEIGEAS-LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++G V EA LL + M+ F P + TF+ +I +C+KG + ALE + ++V
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 214 KSFAPGARAWEALL 227
K F P + L+
Sbjct: 401 KGFEPNVITYTILI 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 1 MRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G CP + + +I+ L K L ++ QM + I P + I+++ G
Sbjct: 538 MRFRG-CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +M+ GL PD+ TYN INGLCK + EA+ + + + G P+ VT N
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
TL+ C G + A ++ + G N T+ I+++ V K +
Sbjct: 657 TLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL L++M + G +P+V+ YTI++ G +G + +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + M GL + YN I LCK K+ +A+Q+ M GCKP++ T N+L+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML------------DGLVGKAEIGEASL- 171
LC+ + +A G+ ++M L+GV N TY ++ D LVG+ L
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 172 ----------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
L+E+M + +P ++ + +I C+ G +N+AL+ ++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 607 DMIQRGLTPDIVTYNSLI 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ V Y +++G V G + + D L+ M++ G PD +T+N+ I+GLCK+ + A++
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+D M+K G +PNV+T L+ C+ G +A V+ M KG+ LN Y ++ L
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+I +A + EM K P TF+++I +C+ + EAL L + ++ +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513
Query: 222 AWEALL 227
+ L+
Sbjct: 514 TYNTLI 519
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + M +G+ + V Y ++ +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+L EM G D TYN I LCK ++ + +++ M P++ +CN
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C G ++ A +++M +G+ ++ TY +++GL EA L + K
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++ +I C +GL N+A +L+ K V+ F P W L+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K+ + DAL + +M G KPD+ + ++ G+
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ +ML+ G+I + TYN I+ + + +A ++V M GC + +T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ G K G++++M + + ++++ I+++ ++ +A L +M+++
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++++I +C+ G EAL L + AK P A + L+ S
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI---------SRYC 663
Query: 241 FAGLFN 246
+ GLFN
Sbjct: 664 YEGLFN 669
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +++ A +L M + G P+ + Y +++ +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
+ +L +EM ++G PDV T+N I+GLCK ++ EA ++ D M+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 108 ------KLG------------CKPNVVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVEL 148
++G PN V NTL+ +G +AK ++ K M + G E
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ IM+DGL K + A L+EM+KK F P T+ +I C++G EA +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KKIVAKSFAPGARAWEALL 227
+ AK + + L+
Sbjct: 431 NSMSAKGLSLNTVGYNCLI 449
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+P Y +VL +VA +F +ML G+ P VYT+ V + C N+VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ M K GC PN + L+ AL E +++A +++EM L G E ++ T+ ++ GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
I EA+ L + ML + F + ++ +C+ G ++EA ++ KI P
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336
Query: 221 RAWEALL--------LHSGSDLTYSETTFAGL 244
+ L+ DL Y AG
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + ++ LV A + M GI P V + +V+ +
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M G +P+ Y + I+ L + N+V+EA+++++ M +GC+P+V T N ++ L
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 126 CEAGDLSKAKGVMKEMGLKGVEL-------------------------------NLHTYR 154
C+AG + +A + M L+ N Y
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 155 IMLDGLVGKAEIGEAS-LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++G V EA LL + M+ F P + TF+ +I +C+KG + ALE + ++V
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 214 KSFAPGARAWEALL 227
K F P + L+
Sbjct: 401 KGFEPNVITYTILI 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 1 MRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G CP + + +I+ L K L ++ QM + I P + I+++ G
Sbjct: 538 MRFRG-CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +M+ GL PD+ TYN INGLCK + EA+ + + + G P+ VT N
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
TL+ C G + A ++ + G N T+ I+++ V K +
Sbjct: 657 TLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL L++M + G +P+V+ YTI++ G +G + +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + M GL + YN I LCK K+ +A+Q+ M GCKP++ T N+L+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML------------DGLVGKAEIGEASL- 171
LC+ + +A G+ ++M L+GV N TY ++ D LVG+ L
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 172 ----------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
L+E+M + +P ++ + +I C+ G +N+AL+ ++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 607 DMIQRGLTPDIVTYNSLI 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ V Y +++G V G + + D L+ M++ G PD +T+N+ I+GLCK+ + A++
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+D M+K G +PNV+T L+ C+ G +A V+ M KG+ LN Y ++ L
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+I +A + EM K P TF+++I +C+ + EAL L + ++ +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513
Query: 222 AWEALL 227
+ L+
Sbjct: 514 TYNTLI 519
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + M +G+ + V Y ++ +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+L EM G D TYN I LCK ++ + +++ M P++ +CN
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C G ++ A +++M +G+ ++ TY +++GL EA L + K
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++ +I C +GL N+A +L+ K V+ F P W L+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K+ + DAL + +M G KPD+ + ++ G+
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ +ML+ G+I + TYN I+ + + +A ++V M GC + +T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ G K G++++M + + ++++ I+++ ++ +A L +M+++
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++++I +C+ G EAL L + AK P A + L+ S
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI---------SRYC 663
Query: 241 FAGLFN 246
+ GLFN
Sbjct: 664 YEGLFN 669
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +++ A +L M + G P+ + Y +++ +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
+ +L +EM ++G PDV T+N I+GLCK ++ EA ++ D M+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 108 ------KLG------------CKPNVVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVEL 148
++G PN V NTL+ +G +AK ++ K M + G E
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ IM+DGL K + A L+EM+KK F P T+ +I C++G EA +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KKIVAKSFAPGARAWEALL 227
+ AK + + L+
Sbjct: 431 NSMSAKGLSLNTVGYNCLI 449
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+P Y +VL +VA +F +ML G+ P VYT+ V + C N+VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ M K GC PN + L+ AL E +++A +++EM L G E ++ T+ ++ GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
I EA+ L + ML + F + ++ +C+ G ++EA ++ KI P
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336
Query: 221 RAWEALL--------LHSGSDLTYSETTFAGL 244
+ L+ DL Y AG
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + ++ LV A + M GI P V + +V+ +
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M G +P+ Y + I+ L + N+V+EA+++++ M +GC+P+V T N ++ L
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 126 CEAGDLSKAKGVMKEMGLKGVEL-------------------------------NLHTYR 154
C+AG + +A + M L+ N Y
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 155 IMLDGLVGKAEIGEAS-LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++G V EA LL + M+ F P + TF+ +I +C+KG + ALE + ++V
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 214 KSFAPGARAWEALL 227
K F P + L+
Sbjct: 401 KGFEPNVITYTILI 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 1 MRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G CP + + +I+ L K L ++ QM + I P + I+++ G
Sbjct: 538 MRFRG-CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +M+ GL PD+ TYN INGLCK + EA+ + + + G P+ VT N
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
TL+ C G + A ++ + G N T+ I+++ V K +
Sbjct: 657 TLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL L++M + G +P+V+ YTI++ G +G + +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + M GL + YN I LCK K+ +A+Q+ M GCKP++ T N+L+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML------------DGLVGKAEIGEASL- 171
LC+ + +A G+ ++M L+GV N TY ++ D LVG+ L
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 172 ----------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
L+E+M + +P ++ + +I C+ G +N+AL+ ++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 607 DMIQRGLTPDIVTYNSLI 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ V Y +++G V G + + D L+ M++ G PD +T+N+ I+GLCK+ + A++
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+D M+K G +PNV+T L+ C+ G +A V+ M KG+ LN Y ++ L
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+I +A + EM K P TF+++I +C+ + EAL L + ++ +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513
Query: 222 AWEALL 227
+ L+
Sbjct: 514 TYNTLI 519
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + M +G+ + V Y ++ +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+L EM G D TYN I LCK ++ + +++ M P++ +CN
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C G ++ A +++M +G+ ++ TY +++GL EA L + K
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++ +I C +GL N+A +L+ K V+ F P W L+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K+ + DAL + +M G KPD+ + ++ G+
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ +ML+ G+I + TYN I+ + + +A ++V M GC + +T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ G K G++++M + + ++++ I+++ ++ +A L +M+++
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++++I +C+ G EAL L + AK P A + L+ S
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI---------SRYC 663
Query: 241 FAGLFN 246
+ GLFN
Sbjct: 664 YEGLFN 669
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +++ A +L M + G P+ + Y +++ +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
+ +L +EM ++G PDV T+N I+GLCK ++ EA ++ D M+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 108 ------KLG------------CKPNVVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVEL 148
++G PN V NTL+ +G +AK ++ K M + G E
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ IM+DGL K + A L+EM+KK F P T+ +I C++G EA +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KKIVAKSFAPGARAWEALL 227
+ AK + + L+
Sbjct: 431 NSMSAKGLSLNTVGYNCLI 449
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+P Y +VL +VA +F +ML G+ P VYT+ V + C N+VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ M K GC PN + L+ AL E +++A +++EM L G E ++ T+ ++ GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
I EA+ L + ML + F + ++ +C+ G ++EA ++ KI P
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336
Query: 221 RAWEALL--------LHSGSDLTYSETTFAGL 244
+ L+ DL Y AG
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + ++ LV A + M GI P V + +V+ +
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M G +P+ Y + I+ L + N+V+EA+++++ M +GC+P+V T N ++ L
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 126 CEAGDLSKAKGVMKEMGLKGVEL-------------------------------NLHTYR 154
C+AG + +A + M L+ N Y
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 155 IMLDGLVGKAEIGEAS-LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++G V EA LL + M+ F P + TF+ +I +C+KG + ALE + ++V
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 214 KSFAPGARAWEALL 227
K F P + L+
Sbjct: 401 KGFEPNVITYTILI 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 1 MRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G CP + + +I+ L K L ++ QM + I P + I+++ G
Sbjct: 538 MRFRG-CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +M+ GL PD+ TYN INGLCK + EA+ + + + G P+ VT N
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
TL+ C G + A ++ + G N T+ I+++ V K +
Sbjct: 657 TLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL L++M + G +P+V+ YTI++ G +G + +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + M GL + YN I LCK K+ +A+Q+ M GCKP++ T N+L+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML------------DGLVGKAEIGEASL- 171
LC+ + +A G+ ++M L+GV N TY ++ D LVG+ L
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 172 ----------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
L+E+M + +P ++ + +I C+ G +N+AL+ ++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 607 DMIQRGLTPDIVTYNSLI 624
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ V Y +++G V G + + D L+ M++ G PD +T+N+ I+GLCK+ + A++
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALE 393
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+D M+K G +PNV+T L+ C+ G +A V+ M KG+ LN Y ++ L
Sbjct: 394 FLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALC 453
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGAR 221
+I +A + EM K P TF+++I +C+ + EAL L + ++ +
Sbjct: 454 KDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513
Query: 222 AWEALL 227
+ L+
Sbjct: 514 TYNTLI 519
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + M +G+ + V Y ++ +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+L EM G D TYN I LCK ++ + +++ M P++ +CN
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C G ++ A +++M +G+ ++ TY +++GL EA L + K
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++ +I C +GL N+A +L+ K V+ F P W L+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K+ + DAL + +M G KPD+ + ++ G+
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ +ML+ G+I + TYN I+ + + +A ++V M GC + +T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ G K G++++M + + ++++ I+++ ++ +A L +M+++
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++++I +C+ G EAL L + AK P A + L+ S
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI---------SRYC 663
Query: 241 FAGLFN 246
+ GLFN
Sbjct: 664 YEGLFN 669
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +++ A +L M + G P+ + Y +++ +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
+ +L +EM ++G PDV T+N I+GLCK ++ EA ++ D M+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 108 ------KLG------------CKPNVVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVEL 148
++G PN V NTL+ +G +AK ++ K M + G E
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ IM+DGL K + A L+EM+KK F P T+ +I C++G EA +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KKIVAKSFAPGARAWEALL 227
+ AK + + L+
Sbjct: 431 NSMSAKGLSLNTVGYNCLI 449
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+P Y +VL +VA +F +ML G+ P VYT+ V + C N+VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ M K GC PN + L+ AL E +++A +++EM L G E ++ T+ ++ GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
I EA+ L + ML + F + ++ +C+ G ++EA ++ KI P
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336
Query: 221 RAWEALL--------LHSGSDLTYSETTFAGL 244
+ L+ DL Y AG
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + ++ LV A + M GI P V + +V+ +
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M G +P+ Y + I+ L + N+V+EA+++++ M +GC+P+V T N ++ L
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 126 CEAGDLSKAKGVMKEMGLKGVEL-------------------------------NLHTYR 154
C+AG + +A + M L+ N Y
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 155 IMLDGLVGKAEIGEAS-LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++G V EA LL + M+ F P + TF+ +I +C+KG + ALE + ++V
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 214 KSFAPGARAWEALL 227
K F P + L+
Sbjct: 401 KGFEPNVITYTILI 414
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 1 MRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G CP + + +I+ L K L ++ QM + I P + I+++ G
Sbjct: 538 MRFRG-CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +M+ GL PD+ TYN INGLCK + EA+ + + + G P+ VT N
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
TL+ C G + A ++ + G N T+ I+++ V K +
Sbjct: 657 TLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL L++M + G +P+V+ YTI++ G +G + +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ + M GL + YN I LCK K+ +A+Q+ M GCKP++ T N+L+
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML------------DGLVGKAEIGEASL- 171
LC+ + +A G+ ++M L+GV N TY ++ D LVG+ L
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 172 ----------------------LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
L+E+M + +P ++ + +I C+ G +N+AL+ ++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 210 KIVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 607 DMIQRGLTPDIVTYNSLI 624
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 42 KPDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
P+ V Y +++G V G + + D L+ M++ G PD +T+N+ I+GLCK+ + A+
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+ +D M+K G +PNV+T L+ C+ G +A V+ M KG+ LN Y ++ L
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+I +A + EM K P TF+++I +C+ + EAL L + ++ +
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANT 512
Query: 221 RAWEALL 227
+ L+
Sbjct: 513 VTYNTLI 519
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + M +G+ + V Y ++ +
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ D+L EM G D TYN I LCK ++ + +++ M P++ +CN
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + C G ++ A +++M +G+ ++ TY +++GL EA L + K
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T++ +I C +GL N+A +L+ K V+ F P W L+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G + + +I L K+ + DAL + +M G KPD+ + ++ G+
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+ +ML+ G+I + TYN I+ + + +A ++V M GC + +T N
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC+ G K G++++M + + ++++ I+++ ++ +A L +M+++
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++++I +C+ G EAL L + AK P A + L+ S
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI---------SRYC 663
Query: 241 FAGLFN 246
+ GLFN
Sbjct: 664 YEGLFN 669
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V F +++ A +L M + G P+ + Y +++ +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
+ +L +EM ++G PDV T+N I+GLCK ++ EA ++ D M+
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 108 ------KLG------------CKPNVVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVEL 148
++G PN V NTL+ +G +AK ++ K M + G E
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T+ IM+DGL K + A L+EM+KK F P T+ +I C++G EA +++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 209 KKIVAKSFAPGARAWEALL 227
+ AK + + L+
Sbjct: 431 NSMSAKGLSLNTVGYNCLI 449
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+P Y +VL +VA +F +ML G+ P VYT+ V + C N+VD A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++ M K GC PN + L+ AL E +++A +++EM L G E ++ T+ ++ GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
I EA+ L + ML + F + ++ +C+ G ++EA ++ KI P
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336
Query: 221 RAWEALL--------LHSGSDLTYSETTFAGL 244
+ L+ DL Y AG
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + ++ LV A + M GI P V + +V+ +
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L +M G +P+ Y + I+ L + N+V+EA+++++ M +GC+P+V T N ++ L
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 126 CEAGDLSKAKGVMKEMGLKGVEL-------------------------------NLHTYR 154
C+AG + +A + M L+ N Y
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYN 340
Query: 155 IMLDGLVGKAEIGEAS-LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+++G V EA LL + M+ F P + TF+ +I +C+KG + ALE + ++V
Sbjct: 341 TLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK 400
Query: 214 KSFAPGARAWEALL 227
K F P + L+
Sbjct: 401 KGFEPNVITYTILI 414
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 1 MRKLGFCP-GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G CP + + +I+ L K L ++ QM + I P + I+++ G
Sbjct: 538 MRFRG-CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +M+ GL PD+ TYN INGLCK + EA+ + + + G P+ VT N
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
TL+ C G + A ++ + G N T+ I+++ V K +
Sbjct: 657 TLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQ 702
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ + +I L K R +AL + N ++ GI PD V Y ++S EG
Sbjct: 608 MIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
+ +L + + G IP+ T+++ IN K+++ D +
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQRDNS 706
>Medtr1g100593.1 | PPR containing plant-like protein | HC |
chr1:45524249-45521592 | 20130731
Length = 501
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 83/145 (57%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V+ FT +I + + Y N+MK++G PDVV YT++++G V +
Sbjct: 343 MRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITGYVVARE 402
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+F+EML L+P+V+TYN I GLC K DEA + M + GC PN V T
Sbjct: 403 LEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEMERKGCSPNSVVYIT 462
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG 145
L+ L AG ++ A+ V+K+M G
Sbjct: 463 LVSCLRNAGRVADAREVIKQMTETG 487
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI----VAEGD 60
GF ++ + +I + + L +L +M ++G PD Y I+L I + +GD
Sbjct: 262 GFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGD 321
Query: 61 YVKLD-----------ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
K D +L + M G+ P V + I+G + K+D + M K
Sbjct: 322 LDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKN 381
Query: 110 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
GC P+VV ++ A +L KA+ + +EM K + N+ TY M+ GL + EA
Sbjct: 382 GCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEA 441
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ +EM +K P S + ++ C+ G + +A E++K++
Sbjct: 442 CSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMT 484
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 31 YILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
++ QM DG D++ Y IV+ G ++ L EM G PD +TYN+ ++
Sbjct: 252 WVYEQMLLDGGFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHA 311
Query: 90 ---------------LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
L K+ + +A+++++ M + G +P V+ TL+ AG L
Sbjct: 312 ISKGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDAC 371
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+ EM G ++ Y +M+ G V E+ +A + EEML K P T++++I
Sbjct: 372 QYFFNEMKKNGCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRG 431
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C G +EA + K++ K +P + + L+
Sbjct: 432 LCMAGKFDEACSMFKEMERKGCSPNSVVYITLV 464
>Medtr1g100593.2 | PPR containing plant-like protein | HC |
chr1:45524249-45520736 | 20130731
Length = 501
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 83/145 (57%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V+ FT +I + + Y N+MK++G PDVV YT++++G V +
Sbjct: 343 MRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITGYVVARE 402
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+F+EML L+P+V+TYN I GLC K DEA + M + GC PN V T
Sbjct: 403 LEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEMERKGCSPNSVVYIT 462
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG 145
L+ L AG ++ A+ V+K+M G
Sbjct: 463 LVSCLRNAGRVADAREVIKQMTETG 487
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 15/223 (6%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI----VAEGD 60
GF ++ + +I + + L +L +M ++G PD Y I+L I + +GD
Sbjct: 262 GFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGD 321
Query: 61 YVKLD-----------ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
K D +L + M G+ P V + I+G + K+D + M K
Sbjct: 322 LDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKN 381
Query: 110 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
GC P+VV ++ A +L KA+ + +EM K + N+ TY M+ GL + EA
Sbjct: 382 GCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRGLCMAGKFDEA 441
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ +EM +K P S + ++ C+ G + +A E++K++
Sbjct: 442 CSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMT 484
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 31 YILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
++ QM DG D++ Y IV+ G ++ L EM G PD +TYN+ ++
Sbjct: 252 WVYEQMLLDGGFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHA 311
Query: 90 ---------------LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
L K+ + +A+++++ M + G +P V+ TL+ AG L
Sbjct: 312 ISKGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDAC 371
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+ EM G ++ Y +M+ G V E+ +A + EEML K P T++++I
Sbjct: 372 QYFFNEMKKNGCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRG 431
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C G +EA + K++ K +P + + L+
Sbjct: 432 LCMAGKFDEACSMFKEMERKGCSPNSVVYITLV 464
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 120/227 (52%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G+ P +T +I VK+ ++AL + ++M G+ +V+ ++ G GD
Sbjct: 281 MREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGD 340
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+LFDE++ G++PDV ++V ING K +++A ++ M +G +PNV N+
Sbjct: 341 VNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNS 400
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL E L A G+ E G+ N+ TY I+L L ++ EA L E+M+ K
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +++N+I C+KG +++A ++K I+ + P A + L+
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLI 506
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ +T +I L K + AL + + MK G+K DVV Y+ ++ G D
Sbjct: 599 GISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESA 658
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ F E+L +GL P+ YN I+G N ++ A+ + MIK ++ +++G
Sbjct: 659 SKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGG 718
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + G LS A + EM K + ++ Y ++++GL ++ AS +L+EM P
Sbjct: 719 LLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPS 778
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I ++G + EA L +++ K P ++ L+
Sbjct: 779 VLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + +++ + G+ PDVV ++++++G GD K EL+ M ++G+ P+V+ N +
Sbjct: 344 ALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLE 403
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G +QN ++ A + D ++ G NVVT N LL L E G +++A + ++M KG+
Sbjct: 404 GFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITP 462
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+L +Y ++ G K + +A +L+ +L++ P + T+ +I +KG A +
Sbjct: 463 SLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522
Query: 209 KKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
++++A + AP + ++ G SET
Sbjct: 523 EQMMAANIAPTDHTFNTVINGLGKTGRVSET 553
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K GF + + +I KE AL +M + GI PDV+ YT ++ G+
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIG 621
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
E+ +M G+ DV Y+ I+G CK + ++ A + ++ +G PN V N+++
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
++ A + +EM V +L Y ++ GL+ + ++ A L EML K
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + +I + G + A +++K++ + P + L+
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILI 786
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ +G P V ++ ++ A + ++ + GI +VV Y I+L + G
Sbjct: 386 MKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGK 444
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L+++M+ G+ P + +YN I G CK+ +D+A ++ S+++ G KPN VT
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + GD +A V ++M + HT+ +++GL + E L +K+
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F S T+++II ++G ++ AL +++ +P + +L+
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLI 611
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERG-MDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + ++I L ++G MD Y +L + + G+KP+ V YT+++ G +GD
Sbjct: 459 GITPSLVSYNNLI--LGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +F++M+ + P +T+N INGL K +V E +++ IK G +T N+++
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
+ G + A +EM G+ ++ TY ++DGL +IG A + +M K
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMK 636
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C+ + A + +++ P + +++
Sbjct: 637 LDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +T +I K+ A + QM I P + V++G+ G +
Sbjct: 494 GLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSET 553
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + + G + TYN I+G K+ VD A+ M + G P+V+T +L+
Sbjct: 554 QDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDG 613
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC++ + A + +M KG++L++ Y ++DG ++ AS E+L P
Sbjct: 614 LCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPN 673
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIV 212
+ ++++I + AL L ++++
Sbjct: 674 TVVYNSMISGFIHLNNMEAALNLHQEMI 701
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P F +I L K R + LN + G + Y ++ G EG
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGA 584
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EM G+ PDV TY I+GLCK NK+ A+++ M G K +VV +
Sbjct: 585 VDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSA 644
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ D+ A E+ G+ N Y M+ G + + A L +EM+K
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +II + ++G ++ AL+L ++++K P + L+
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + ++++L + + +A + +M GI P +V Y ++ G +G K +
Sbjct: 429 VVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLK 488
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+L GL P+ TY + I+G K+ + A + + M+ P T NT++ L + G
Sbjct: 489 SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTG 548
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+S+ + + +G TY ++DG + + A L EM + P T+
Sbjct: 549 RVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYT 608
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ I ALE+ + K A+ AL+
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALI 646
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P + + MI + AL + +M ++ + D+ YT ++ G++ EG
Sbjct: 668 IGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSL 727
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+L+ EML ++PD+ Y V INGL +++ A +I+ M P+V+ N L+
Sbjct: 728 ALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIA 787
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
G+L +A + EM KG+ + TY I+++G
Sbjct: 788 GNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R +KE + + + K G++ D Y+I++ + D EL EM G
Sbjct: 226 VMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFG 285
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC--------- 126
+P TY I KQ EA+++ D M+ +G NV+ +L+ C
Sbjct: 286 WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLAL 345
Query: 127 --------------------------EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+ GD+ KA + M L G++ N+ +L+G
Sbjct: 346 QLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ + A L +E ++ T++ ++ + + G +NEA L +K+V+K P
Sbjct: 406 HEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSL 464
Query: 221 RAWEALLL 228
++ L+L
Sbjct: 465 VSYNNLIL 472
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G + D + +L V E F ML L+P V N + + ++N V +A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
Q+ D M++ G + T + ++ A + G + + KE +G+E++ Y I++
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+ + ++ A LL+EM + + P T+ +I ++G EAL L ++V+
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYT--IVLSGIVAEGDYVKLD 65
P V +++ +V+ DA + ++M + GI D CYT +V+ + EG + +++
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGD--CYTLHVVMRACMKEGKFEEVE 240
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ F E GL D Y++ + +C++ ++ A +++ M + G P+ T ++ A
Sbjct: 241 KFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVAC 300
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
+ G+ +A + EM G+ +N+ R ++ G ++ A L +E+++ P
Sbjct: 301 VKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDV 360
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAG 243
F +I + G + +A EL ++ P +LL H + L ++ G
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHA----YG 416
Query: 244 LFNQ 247
LF++
Sbjct: 417 LFDE 420
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ +T +I L + +A IL +M + I P V+ Y I+++G EG+ + L
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCK 92
DEML GL+PD TY++ +NG K
Sbjct: 802 HDEMLDKGLVPDDTTYDILVNGKLK 826
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ GF F +++ V+ + DA+ M + + P V +L+ +V
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L+DEM+ G+ D YT +V + K+ K +E + G + + + L+
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A+C DL+ A ++KEM G + TY ++ V + EA L +EM+
Sbjct: 263 QAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLP 322
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ C G +N AL+L ++V P + L+
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLI 367
>Medtr7g090340.1 | PPR containing plant-like protein | HC |
chr7:35534069-35535796 | 20130731
Length = 521
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 5/230 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ GF P V + ++ +R + QM+++ I P+V +V+S G+
Sbjct: 176 MKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGE 235
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI-KLGCKPNVVTCN 119
K E+ ++M +GL P+V T+N I+G C + + A+++ D M+ K G PNVVT N
Sbjct: 236 LNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFN 295
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEML 177
TL+ C+ G L +A V EM L V N+ TY +++G G +E+G L EEM
Sbjct: 296 TLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIG--LFEEME 353
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ T++ +I +C++G +A ++K++ + P A + AL+
Sbjct: 354 RNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALI 403
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 1/240 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ F +I KE + +A + ++MK + P+VV Y +++G G+
Sbjct: 282 MGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGN 341
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF+EM + D+ TYN I GLCK+ K +A +V + K PN T +
Sbjct: 342 SEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSA 401
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + +A V + M G N +T+R++ + A +L +ML++
Sbjct: 402 LIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERF 461
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P SS + +C+ G AL L +I AK P E +++ +GS+ S +T
Sbjct: 462 MTPDSSILSEVYSGLCRCGRKQFALMLCSEIEAKRLLPQGFDREKIVI-TGSEHDTSNST 520
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ F +M G P V + N +++ + + + + M + PNV T N ++ A
Sbjct: 171 DTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAY 230
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML-KKCFYPR 184
C+ G+L+KA V+++M G+ N+ T+ ++ G K +G A + + M+ K +P
Sbjct: 231 CKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPN 290
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+ +I C++G ++EA + ++ + AP + L+
Sbjct: 291 VVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLI 333
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 4/216 (1%)
Query: 7 CPGVMD-FTDMIRFLVKEERGMDALYILNQMKQ--DGIKPDVVCYTIVLSGIVAEGDYVK 63
CP F I++ K + DA+Y N M++ DG KP V I++ G V G + +
Sbjct: 138 CPQTEPIFRFAIQYYCKAFKFDDAVYAFNVMRRLIDG-KPSVSVCNILIHGFVKSGRFDR 196
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
E +++M+ + PDV+T+N+ I+G C+ K A+++ D M K+GC PNVVT NTL+
Sbjct: 197 AFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIK 256
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
L + + G++ EM G +L+ T I++DGL + + + LL E K+ P
Sbjct: 257 GLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGVLP 316
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+ + ++ +C KG +ALE++ ++ +K P
Sbjct: 317 KGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPS 352
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 12/213 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +I VK R A NQM +D IKPDV + I++SG + + E+
Sbjct: 176 PSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEM 235
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FDEM +G P+V T+N I GL ++ +VDE I +V MI+LGC+ + VTC L+ LC+
Sbjct: 236 FDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCK 295
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +S+ ++ E +GV + Y ++++ L GK E +A ++ E+ K P
Sbjct: 296 EGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVP---- 351
Query: 188 FDNIICCMCQ----KGL--INEALELMKKIVAK 214
++I C+ +GL I EA+ L++K++ +
Sbjct: 352 --SLISCIVMIDGLRGLGKIEEAMRLVEKMLKE 382
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 40/237 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK-PDVVCYTIVLSGIVAEG 59
MRK+G P V+ F +I+ L +E R + + ++ +M + G + DV C I++ G+ EG
Sbjct: 239 MRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTC-EILVDGLCKEG 297
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC- 118
++ +L E G++P Y Y V + LC + + +A++++ + GC P++++C
Sbjct: 298 RVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCI 357
Query: 119 -----------------------------------NTLLGALCEAGDLSKAKGVMKEMGL 143
N++L LC+AG A +
Sbjct: 358 VMIDGLRGLGKIEEAMRLVEKMLKEEGMVLDVVTFNSVLQDLCDAGRTEDANRLRLLASS 417
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM--CQK 198
KG+E + TY+I++ G G+ E L++ EML K F P ++++ ++ + CQ+
Sbjct: 418 KGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSNCQR 474
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G V + + L K R +A ILN M + G+KP+VV +T+ + EG+
Sbjct: 418 MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGN 477
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + LF +M G +P++ TYN I+ CK+ KV +A +I MI G P++ T ++
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G + +A + EM LKG+ N+ TY M+ GL + EA L +EM+K
Sbjct: 538 LIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIG 597
Query: 181 FYPRSSTFDNIICCMCQKGLINEALE 206
P F +++ K L + LE
Sbjct: 598 LIPDDRVFTSLVGSF-HKPLTHAGLE 622
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL---GLIPDVYTYNVYIN 88
+L +M+ G+ ++V + + G G K+DE ++ G+ DV+TYN+ N
Sbjct: 379 LLLEMQSKGVDLNLVIFNTTMDGYCRRG---KMDEALRLQAIMEKKGINADVFTYNILAN 435
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK ++ DEA I++SM++ G KPNVVT + C+ G+L++A+ + ++M KG
Sbjct: 436 GLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP 495
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
N+ TY ++D K ++ +A + EM+ K P T+ ++I C G ++EAL+L
Sbjct: 496 NIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLF 555
Query: 209 KKIVAKSFAPGARAWEALL 227
++ K + +++
Sbjct: 556 NEMRLKGITRNVATYTSMI 574
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 108/210 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + M++ GI DV Y I+ +G+ Y + + + M+ G+ P+V T+ ++I
Sbjct: 410 EALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFI 469
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
CK+ + EA ++ M K G PN++T NTL+ A C+ + +A + EM KG+
Sbjct: 470 EIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLL 529
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+L+TY ++ G + EA L EM K +T+ ++I + ++G +EA +L
Sbjct: 530 PDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKL 589
Query: 208 MKKIVAKSFAPGARAWEALLLHSGSDLTYS 237
+++ P R + +L+ LT++
Sbjct: 590 YDEMMKIGLIPDDRVFTSLVGSFHKPLTHA 619
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A I +M++ I+ DV Y+ ++S G+ + LFDEM ++P+ +TY I
Sbjct: 305 EAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALI 364
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G+CK +++ A ++ M G N+V NT + C G + +A + M KG+
Sbjct: 365 GGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGIN 424
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY I+ +GL EA +L M++K P TF I C++G + EA L
Sbjct: 425 ADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERL 484
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ + K P + L+
Sbjct: 485 FRDMEKKGEVPNIITYNTLI 504
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ V ++ MI + + A + ++M Q I P+ Y ++ G+ G
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQ 372
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L EM G+ ++ +N ++G C++ K+DEA+++ M K G +V T N
Sbjct: 373 MEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNI 432
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L LC+ +AK ++ M KGV+ N+ T+ + ++ + + EA L +M KK
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+K + +A ++ +++ K P + +L+
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLI 539
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 4/214 (1%)
Query: 8 PGVMDFTDMIRFLV--KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P V + ++ V K+ +G+D IL M+++ + V Y+I++ + GD + +
Sbjct: 250 PNVFTYNTLLNAYVGRKDRKGVDE--ILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAE 307
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
++F+EM + DVY Y+ I+ + + A + D M + PN T L+G +
Sbjct: 308 KIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGV 367
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+AG + A+ ++ EM KGV+LNL + +DG + ++ EA L M KK
Sbjct: 368 CKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADV 427
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
T++ + +C+ +EA ++ +V K P
Sbjct: 428 FTYNILANGLCKLHRYDEAKCILNSMVEKGVKPN 461
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYVKLDELF 68
V T +I L + A ++++M GI KP+V Y +L+ V D +DE+
Sbjct: 216 VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEIL 275
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
M ++ V TY++ I ++EA +I + M + + +V ++++
Sbjct: 276 KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G++ +A + EM + + N HTY ++ G+ ++ A +LL EM K F
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIF 395
Query: 189 DNIICCMCQKGLINEALEL 207
+ + C++G ++EAL L
Sbjct: 396 NTTMDGYCRRGKMDEALRL 414
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVM 138
V + + I+ LC++ +V++A +++D M+ G KPNV T NTLL A D ++
Sbjct: 216 VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEIL 275
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
K M + V ++ TY I++ +I EA + EEM +K + ++I +
Sbjct: 276 KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
G + A L ++ + P A + AL+
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALI 364
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 16/239 (6%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P ++ +I FL + A + +MK++GI P V YTI++ G +
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ FDEML G P+V TY I+ K ++ A ++ + M+ GCKPNVVT L+
Sbjct: 515 RKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDG 574
Query: 125 LCEAGDLSKAKGVMKEM--GLKGVEL--------------NLHTYRIMLDGLVGKAEIGE 168
C+AG + KA + M ++ ++ N+ TY ++DGL + E
Sbjct: 575 HCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKE 634
Query: 169 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
A LL+ ML P +D +I C+ G + +A E+ K+ + ++P + + +
Sbjct: 635 AHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 1/211 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + ++ L K R +A +L+ M G +P+ + Y V+ G G E+
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M G P++YTY+ +I+ L K N++D ++++ M++ C PNVV ++ LC+
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A +M +M KG N+ TY M+DG +I + L +M K P T
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ +I C GL++EA +L+ ++ +++ P
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEM-KQTYWP 823
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 20/241 (8%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ +T +I +K ++ A + M +G KP+VV YT ++ G G K
Sbjct: 525 GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKA 584
Query: 65 DELFDEMLVLGLI------------------PDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
+++ M G I P+V TY ++GLCK N+V EA +++D+M
Sbjct: 585 CQIYARMR--GDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTM 642
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
+ GC+PN + + ++ C+ G L A+ V +M +G NL+TY +D L +
Sbjct: 643 LAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRL 702
Query: 167 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+L +ML+ P + ++ +C+ G +EA +LM K+ K P + A+
Sbjct: 703 DLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAM 762
Query: 227 L 227
+
Sbjct: 763 I 763
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 16/243 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG ++ ++ R L + A I+ +M G PD Y+ V+ +
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K LF+EM G++P VYTY + I+ CK + +A + D M+ GC PNVVT
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML--- 177
L+ A +A + A + + M L+G + N+ TY ++DG +I +A + M
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI 595
Query: 178 -------------KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
C P T+ ++ +C+ + EA EL+ ++A P ++
Sbjct: 596 ESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYD 655
Query: 225 ALL 227
A++
Sbjct: 656 AVI 658
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 25/251 (9%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + + M+ L + +A+ IL++M+ P+VV Y I+LSG + +G +
Sbjct: 275 FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCK 334
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ M+ G P+ +N I+ CK A ++ MIK GC+P + N +G++
Sbjct: 335 RILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSV 394
Query: 126 CEAGD------LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
C + L + EM GV LN L G + +A ++ EM+ K
Sbjct: 395 CSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGK 454
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG-------------------A 220
F P ST+ +I +C + +A L +++ P A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514
Query: 221 RAWEALLLHSG 231
R W +LH G
Sbjct: 515 RKWFDEMLHKG 525
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 8/216 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G+ P + ++ I L K+ R L +L++M ++ P+VV YT ++ G+ G
Sbjct: 677 MSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIG- 735
Query: 61 YVKLDELFDEMLVL---GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K DE + ML + G P+V TY I+G K K+++ +++ M GC PN +T
Sbjct: 736 --KTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ C G L +A ++ EM ++ ++R +++G E + LL+E+
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELS 851
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+ P S + +I + G + AL+L+++I +
Sbjct: 852 ENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISS 887
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF---DEMLVLGLIPDVYTYNV 85
AL L ++K G KP Y ++ + D KLD + EML + D YT +
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQ-VFLRAD--KLDTAYLVKREMLSYAFVMDRYTLSC 251
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+ LCK K EA ++D P+ V N ++ LCEA +A ++ M
Sbjct: 252 FAYSLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSS 309
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
N+ TYRI+L G + K ++G +L M+ + YP F+++I C+ + A
Sbjct: 310 CIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAY 369
Query: 206 ELMKKIVAKSFAPG 219
+L KK++ PG
Sbjct: 370 KLFKKMIKCGCQPG 383
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 23 EERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYT 82
E MD + L+ +G P+V+ Y ++ G+ + EL D ML G P+
Sbjct: 596 ESSDMDKYFKLDHNNCEG--PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIV 653
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
Y+ I+G CK K+ +A ++ M + G PN+ T ++ + L + L V+ +M
Sbjct: 654 YDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKML 713
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
N+ Y M+DGL + EA L+ +M +K P T+ +I + G I
Sbjct: 714 ENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIE 773
Query: 203 EALELMKKIVAKSFAPGARAWEALLLHSGSD 233
+ LEL + + +K AP + L+ H S+
Sbjct: 774 QCLELFRDMCSKGCAPNFITYRVLINHCCSN 804
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 6/229 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P F +I K A + +M + G +P + Y I + + + +
Sbjct: 344 GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSS 403
Query: 65 DEL------FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
D L + EML LG++ + + + LC K D+A +I+ M+ G P+ T
Sbjct: 404 DILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTY 463
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+ ++G LC+A + KA + +EM G+ +++TY I++D I +A +EML
Sbjct: 464 SKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLH 523
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P T+ +I + + A EL + ++ + P + AL+
Sbjct: 524 KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALI 572
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 120/226 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I FL ++ A+ ++ M++ G + + V Y +++ G+ + G Y + +L
Sbjct: 215 PSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKL 274
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G P + ++V +N L K+ K+DEA+ + M K KP+VVT N + LC+
Sbjct: 275 MFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCK 334
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++A ++ EM + G E N TYR++LDGL + +L M P S T
Sbjct: 335 EGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDT 394
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
F+ ++ + + G I+ +++++V + +WEA++ ++ S+
Sbjct: 395 FNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVIKYACSE 440
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 103/188 (54%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G +P+ V + I++ G + +G++ ++FDEML + P V +YN I L ++ +D+A
Sbjct: 177 GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKA 236
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+++V+ M + G + N VT L+ LC G +AK +M +M +G + L + ++++
Sbjct: 237 MRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L + +I EA +L EM K+ P T++ + +C++G EA +++ ++ P
Sbjct: 297 LGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
Query: 220 ARAWEALL 227
A + LL
Sbjct: 357 AATYRMLL 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 39/251 (15%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+LG+ + ++ L + + IL QMK D+ C V + V
Sbjct: 74 QLGYKHYYPSYAALLYKLARSKNFHAVETILTQMKNT----DIQCNETVFIALFQHYGPV 129
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-------- 114
K ELF M + ++N +N L EA + ++G +PN
Sbjct: 130 KAVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMM 189
Query: 115 ---------------------------VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
VV+ N+L+G L GDL KA ++++M KG
Sbjct: 190 KGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKR 249
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY ++++GL + EA L+ +M + P+ F ++ + ++G I+EA+ L
Sbjct: 250 ANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVL 309
Query: 208 MKKIVAKSFAP 218
+++ + P
Sbjct: 310 FREMRKRRLKP 320
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRK P V+ + + +L KE + +A +L +M+ G +P+ Y ++L G+ GD
Sbjct: 313 MRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGD 372
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + + M P T+N + GL K +D +++ M+K ++ +
Sbjct: 373 FESGLSVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEA 432
Query: 121 LLGALCEAGDLS 132
++ C D S
Sbjct: 433 VIKYACSEDDKS 444
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 120/226 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I FL ++ A+ ++ M++ G + + V Y +++ G+ + G Y + +L
Sbjct: 215 PSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKL 274
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G P + ++V +N L K+ K+DEA+ + M K KP+VVT N + LC+
Sbjct: 275 MFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCK 334
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++A ++ EM + G E N TYR++LDGL + +L M P S T
Sbjct: 335 EGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDT 394
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
F+ ++ + + G I+ +++++V + +WEA++ ++ S+
Sbjct: 395 FNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVIKYACSE 440
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 103/188 (54%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G +P+ V + I++ G + +G++ ++FDEML + P V +YN I L ++ +D+A
Sbjct: 177 GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKA 236
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+++V+ M + G + N VT L+ LC G +AK +M +M +G + L + ++++
Sbjct: 237 MRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L + +I EA +L EM K+ P T++ + +C++G EA +++ ++ P
Sbjct: 297 LGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
Query: 220 ARAWEALL 227
A + LL
Sbjct: 357 AATYRMLL 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 39/251 (15%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+LG+ + ++ L + + IL QMK D+ C V + V
Sbjct: 74 QLGYKHYYPSYAALLYKLARSKNFHAVETILTQMKNT----DIQCNETVFIALFQHYGPV 129
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-------- 114
K ELF M + ++N +N L EA + ++G +PN
Sbjct: 130 KAVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMM 189
Query: 115 ---------------------------VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
VV+ N+L+G L GDL KA ++++M KG
Sbjct: 190 KGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKR 249
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY ++++GL + EA L+ +M + P+ F ++ + ++G I+EA+ L
Sbjct: 250 ANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVL 309
Query: 208 MKKIVAKSFAP 218
+++ + P
Sbjct: 310 FREMRKRRLKP 320
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRK P V+ + + +L KE + +A +L +M+ G +P+ Y ++L G+ GD
Sbjct: 313 MRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGD 372
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + + M P T+N + GL K +D +++ M+K ++ +
Sbjct: 373 FESGLSVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEA 432
Query: 121 LLGALCEAGDLS 132
++ C D S
Sbjct: 433 VIKYACSEDDKS 444
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 120/226 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I FL ++ A+ ++ M++ G + + V Y +++ G+ + G Y + +L
Sbjct: 215 PSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKL 274
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G P + ++V +N L K+ K+DEA+ + M K KP+VVT N + LC+
Sbjct: 275 MFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCK 334
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++A ++ EM + G E N TYR++LDGL + +L M P S T
Sbjct: 335 EGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDT 394
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
F+ ++ + + G I+ +++++V + +WEA++ ++ S+
Sbjct: 395 FNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEAVIKYACSE 440
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 103/188 (54%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G +P+ V + I++ G + +G++ ++FDEML + P V +YN I L ++ +D+A
Sbjct: 177 GFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKA 236
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+++V+ M + G + N VT L+ LC G +AK +M +M +G + L + ++++
Sbjct: 237 MRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMND 296
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
L + +I EA +L EM K+ P T++ + +C++G EA +++ ++ P
Sbjct: 297 LGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPN 356
Query: 220 ARAWEALL 227
A + LL
Sbjct: 357 AATYRMLL 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 39/251 (15%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+LG+ + ++ L + + IL QMK D+ C V + V
Sbjct: 74 QLGYKHYYPSYAALLYKLARSKNFHAVETILTQMKNT----DIQCNETVFIALFQHYGPV 129
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-------- 114
K ELF M + ++N +N L EA + ++G +PN
Sbjct: 130 KAVELFRAMPKFNCARTLQSFNALLNILVDHGMFCEANDAFERCYEMGFRPNTVTFNIMM 189
Query: 115 ---------------------------VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
VV+ N+L+G L GDL KA ++++M KG
Sbjct: 190 KGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKR 249
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N TY ++++GL + EA L+ +M + P+ F ++ + ++G I+EA+ L
Sbjct: 250 ANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVL 309
Query: 208 MKKIVAKSFAP 218
+++ + P
Sbjct: 310 FREMRKRRLKP 320
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRK P V+ + + +L KE + +A +L +M+ G +P+ Y ++L G+ GD
Sbjct: 313 MRKRRLKPDVVTYNVFVNYLCKEGKTAEAYKMLVEMQISGCEPNAATYRMLLDGLCRNGD 372
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + + M P T+N + GL K +D +++ M+K ++ +
Sbjct: 373 FESGLSVLNLMFASRHCPLSDTFNCLVVGLLKSGNIDGGYFVLEEMVKRKVDFDLESWEA 432
Query: 121 LLGALCEAGDLS 132
++ C D S
Sbjct: 433 VIKYACSEDDKS 444
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P + + +I + DAL IL +MK GI P+ V Y I++ G+ GD
Sbjct: 655 MIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGD 714
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K ++ +EMLV+G++P T+ + + K D +QI + +I +G K + NT
Sbjct: 715 VQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNT 774
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G KAK V+ EM +G+ + TY ++ G + + +A +M
Sbjct: 775 LITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDG 834
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P +T++ ++ + GL+ ++++ + + F P A ++ L+ G E+T
Sbjct: 835 ISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEEST 894
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 4/225 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P + +++ + ++ L I N++ G+K + Y +++ + G K
Sbjct: 728 MGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRK 787
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ DEM+ G+ D TYN I G C + V++A + M G PN+ T NTLL
Sbjct: 788 AKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLW 847
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLKKCF 181
L AG + +++ M +G N TY I++ G VG E E++ EML K F
Sbjct: 848 GLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKE--ESTKFYREMLTKGF 905
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
P + T++ +I C + G +++A EL ++ K P + ++ L
Sbjct: 906 VPTTGTYNVLINCFAKAGRMHKAGELFNEMRTKGRIPNSSTYDIL 950
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ +T +I K ++L + QM +GI DVV + +L + G +
Sbjct: 313 PTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCRHGKLTEAAVF 372
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F EM +GL P+ +Y IN L K +V EA + M+ G ++VTC T++ L +
Sbjct: 373 FKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFK 432
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+A+ + + + + N TY +LDG E+ A L+L++M K+ P T
Sbjct: 433 VRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVIT 492
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F +II +KG++++A+++++++V ++ P + L+
Sbjct: 493 FSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILI 532
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P + + +I L K R M+A + +QM G+ D+V T ++ G+
Sbjct: 376 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTCTTIMDGLFKVRK 435
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E+F+ +L L L P+ TY+ ++G CK +++ A ++ M K PNV+T ++
Sbjct: 436 TKEAEEMFETILKLNLAPNCVTYSALLDGYCKLGEMELAELVLQKMQKEHVPPNVITFSS 495
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + G LSKA V++EM + + N Y I++D + A+ +E+
Sbjct: 496 IINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGKQDVANGYYKEIKVHR 555
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ FD ++ + + G ++ A L+K + +K P + +L+
Sbjct: 556 LEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLI 602
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML---------------- 72
A+ ++ + + ++ DVV Y +L GD + + LF+E+
Sbjct: 245 AMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKRAESLFNEIFAFQKDEDQLTNNDVVT 304
Query: 73 ---VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+ L P + TY I+ CK V+E++ + + MI G +VVTC+++L ALC G
Sbjct: 305 QNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCRHG 364
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
L++A KEM G++ N +Y +++ L + EA L +M+ R +FD
Sbjct: 365 KLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMV-----VRGVSFD 419
Query: 190 NIICCMCQKGLI-----NEALELMKKIVAKSFAPGARAWEALL 227
+ C GL EA E+ + I+ + AP + ALL
Sbjct: 420 IVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALL 462
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 27 MDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
MDA ++ M GI PD+V YT ++ G EG+ + EM DV N
Sbjct: 576 MDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKNTRFDVVACNT 635
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I GL + K D + MI+LG PN VT NT++ + C G++ A G++ EM G
Sbjct: 636 LIKGLLRLGKYDPQ-NVCSRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYG 694
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N TY I++ GL ++ +A+ +L EML P T ++ + + L
Sbjct: 695 IMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTIL 754
Query: 206 ELMKKIV 212
++ K++
Sbjct: 755 QIHNKLI 761
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 100/195 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G V+ + ++ L + + +A +M + G+ P+ V Y +++ + G ++
Sbjct: 345 GIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEA 404
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M+V G+ D+ T ++GL K K EA ++ ++++KL PN VT + LL
Sbjct: 405 FNLQSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDG 464
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G++ A+ V+++M + V N+ T+ +++G K + +A +L EM+++ P
Sbjct: 465 YCKLGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPN 524
Query: 185 SSTFDNIICCMCQKG 199
+ + +I + G
Sbjct: 525 TFVYAILIDAFFRAG 539
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K P V+ F+ +I K+ A+ +L +M Q I P+ Y I++ G
Sbjct: 481 MQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFVYAILIDAFFRAGK 540
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + E+ V L +++ +N L + ++D A +V M G P++V +
Sbjct: 541 QDVANGYYKEIKVHRLEESNVIFDILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTS 600
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G+ S A +++EM K ++ ++ GL+ + + + M++
Sbjct: 601 LIDGYFKEGNESAALSIVQEMTEKNTRFDVVACNTLIKGLLRLGKYDPQN-VCSRMIELG 659
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ II C KG I +AL ++ ++ + P A + L+
Sbjct: 660 LAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILI 706
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F +I +K R A ++M+ P + + +LS A G ++ ++ +M+
Sbjct: 58 FYTLISLYLKCGRFSTASDTFSRMRAFDFVPSLHFWKNLLSEFNASGLVSQVKVMYSDMV 117
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAI------QIVDSMIKLGCKPNVVTCNTLLGALC 126
G++PDV++ NV ++ LCK +D A+ ++D+ VT NT++ C
Sbjct: 118 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVIDN----------VTYNTVIWGFC 167
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ G + + G++ EM +G+ ++ T I++ G + A ++ ++
Sbjct: 168 QKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVMYNLVDGGVTKDVI 227
Query: 187 TFDNIICCMCQKGLINEALELMKK 210
+ +I C+ GL+++A++LM+K
Sbjct: 228 GLNTLIDGYCECGLMSQAMDLMEK 251
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%)
Query: 44 DVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
D V Y V+ G +G + L EM+ GL D T N+ + G C+ V A ++
Sbjct: 155 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVM 214
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
+++ G +V+ NTL+ CE G +S+A +M++ VE+++ TY +L
Sbjct: 215 YNLVDGGVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKM 274
Query: 164 AEIGEASLLLEEMLK-------------------KCFYPRSSTFDNIICCMCQKGLINEA 204
++ A L E+ + P T+ +I C+ + E+
Sbjct: 275 GDLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEES 334
Query: 205 LELMKKIV 212
L L ++++
Sbjct: 335 LSLSEQMI 342
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ +T +I L K++ DA + +M + PDV Y ++ G G LF+
Sbjct: 203 VVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFN 262
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M + + D YT+N ++ CK+ V E +V M+K G KP+++T N+L+ C
Sbjct: 263 DMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVK 322
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
++ KAK + M +GV N+ +Y IM++G + EA L +EM K P + +
Sbjct: 323 EVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYS 382
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I C+ G I +ALEL+ ++ + P + ++L
Sbjct: 383 SLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSIL 420
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + MI R DA+ + N MK + ++ D + ++S EG+ + +
Sbjct: 236 PDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAV 295
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+ PD+ TYN ++G C +VD+A I ++M++ G NV + + ++ C+
Sbjct: 296 VAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCK 355
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + +EM K + + Y ++DG I +A L++EM + P T
Sbjct: 356 VKMMDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIIT 415
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+++I+ +C+ + + + L++KI K P A + L
Sbjct: 416 YNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTIL 454
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K G P ++ + ++ LVKE A I N M Q G+ +V Y+I+++G
Sbjct: 299 MMKEGVKPDIITYNSLMDGYCLVKEVD--KAKNIFNTMVQRGVTANVRSYSIMINGFCKV 356
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF EM +IPD Y+ I+G CK ++ +A+++VD M G PN++T
Sbjct: 357 KMMDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITY 416
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
N++L ALC+ + K +++++ +KG++ + +TY I+ +GL + EA + ++
Sbjct: 417 NSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 474
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F ++ L R AL ++ GIKPD+ Y ++++ G L
Sbjct: 61 PPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFAFSL 120
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +L G PD+ T+N INGLC + +V +A+ + ++ L + + V+ TL+ LC+
Sbjct: 121 FANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLKFQLDRVSYETLINGLCK 180
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G+ A ++KE+ K V+ ++ Y +++GL + +A L EM+ K P T
Sbjct: 181 VGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFT 240
Query: 188 FDNIICCMCQKGLINEALELM 208
++ +I C G + +A+ L
Sbjct: 241 YNAMIYGFCVVGRLKDAIGLF 261
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 96/195 (49%)
Query: 33 LNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCK 92
N++ P + + +L+ + Y ++ G+ PD++TYNV IN +
Sbjct: 51 FNRLTNQIPTPPISQFGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQ 110
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
A + +++K G P++VT NTL+ LC G++ KA +++ + +L+ +
Sbjct: 111 LGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKALNFFEKLVVLKFQLDRVS 170
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
Y +++GL E A LL+E+ +K + II +C+ L+++A +L ++V
Sbjct: 171 YETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMV 230
Query: 213 AKSFAPGARAWEALL 227
AK +P + A++
Sbjct: 231 AKRVSPDVFTYNAMI 245
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 105/258 (40%), Gaps = 35/258 (13%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I + A + + + G PD+V + +++G+ +G+ K
Sbjct: 93 GIKPDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKA 152
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNK----------------------------- 95
F++++VL D +Y INGLCK +
Sbjct: 153 LNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIING 212
Query: 96 ------VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
VD+A + M+ P+V T N ++ C G L A G+ +M L+ VE +
Sbjct: 213 LCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEAD 272
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+T+ ++ + + E ++ M+K+ P T+++++ C +++A +
Sbjct: 273 EYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFN 332
Query: 210 KIVAKSFAPGARAWEALL 227
+V + R++ ++
Sbjct: 333 TMVQRGVTANVRSYSIMI 350
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+I L K++ +DA + ++M I PDVV ++ ++ G G + LF EM++
Sbjct: 140 IIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKN 199
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ DVYT+N+ ++ LCK+ V A ++ M+K G P+VVT +L+ C +++KAK
Sbjct: 200 INRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAK 259
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V + GV + HTY IM++G + EA L +EM ++ P + T++++I +
Sbjct: 260 HVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGL 319
Query: 196 CQKGLINEALELM 208
C+ G I A EL+
Sbjct: 320 CKSGRIPYAWELV 332
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V F ++ L KE A +L M ++G+ PDVV Y ++ G + K +F+
Sbjct: 204 VYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFN 263
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+ +G+ PD +TY++ ING CK VDEA+ + D M + G PN VT N+L+ LC++G
Sbjct: 264 IISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSG 323
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A ++ M G ++ TY ++D L I + P T++
Sbjct: 324 RIPYAWELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQG-----------IQPDMYTYN 372
Query: 190 NIICCMCQKGLINEALELMKKIVAK 214
+I +C+ G + A ++ + ++ K
Sbjct: 373 ILIDGLCKGGRLKNAQDIFQDLLIK 397
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F+ +I + DA + ++M I DV + I++ + EGD L
Sbjct: 167 PDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNL 226
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+IPDV TY ++G C N+V++A + + + ++G P+ T + ++ C+
Sbjct: 227 LAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCK 286
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ +A + EM +G+ N TY ++DGL I A L++ M T
Sbjct: 287 IKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFT 346
Query: 188 FDNIICCMCQKGLINEALE 206
++++I +C+ I++ ++
Sbjct: 347 YNSLIDALCKNHHIDQGIQ 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 99/199 (49%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL +L +++ I +VV + ++ + + + L+ EM+ + PDV T++ I
Sbjct: 118 ALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIY 177
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G C + +A ++ M+ +V T N L+ ALC+ GD+ AK ++ M +GV
Sbjct: 178 GFCIVGQFKDAFRLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIP 237
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++DG E+ +A + + + P + T+ +I C+ +++EAL L
Sbjct: 238 DVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLF 297
Query: 209 KKIVAKSFAPGARAWEALL 227
++ + AP + +L+
Sbjct: 298 DEMRRRGIAPNTVTYNSLI 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 29/214 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++G P ++ MI K + +AL + ++M++ GI P+ V Y ++ G+ G
Sbjct: 265 ISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGR 324
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL D M G D++TYN I+ LCK + +D+ IQ P++ T N
Sbjct: 325 IPYAWELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQGIQ-----------PDMYTYNI 373
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G L A+ + +++ L+ + E L+ +M
Sbjct: 374 LIDGLCKGGRLKNAQDIFQDL------------------LIKEGLFDEVDALMSKMDDNG 415
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T+ II + K +A +L+++++A+
Sbjct: 416 IIPDAVTYVTIIRALFHKDENEQAEKLLREMIAR 449
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+ F P V FT ++ KE + ++A ++L QMK GI+PD+V + +L G G
Sbjct: 246 RYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMG 305
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L EM G P+ +Y V I LCK K++EA+++ M + GC+ +V+T TL+
Sbjct: 306 DAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLI 365
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C+ G + + ++ +M +G N TY ++ K E+ E L+ EM K
Sbjct: 366 SGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCV 425
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
P + ++ +I C+ G + + + L ++ A PG
Sbjct: 426 PDLNIYNIVIRLACKLGEVKQGVRLWNEMEASGLNPG 462
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 110/211 (52%), Gaps = 6/211 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P +T +I+ L K E+ +A+ + +M++ G + DV+ YT ++SG G
Sbjct: 314 MRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGK 373
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EL D+M G P+ TY + K+ +++E +++V+ M K+GC P++ N
Sbjct: 374 IKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNI 433
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ G++ + + EM G+ + T+ IM++G + + + EA +EM+ +
Sbjct: 434 VIRLACKLGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRG 493
Query: 181 FY--PRSSTFDNIICCMCQKGLINEALELMK 209
+ P+ T ++ + L E LE+ K
Sbjct: 494 LFAAPQYGTLKELMNSL----LRAEKLEMAK 520
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDG---IKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ MI+ L K + ++++M+ + I P V + I++ + K E+ D
Sbjct: 151 YKAMIKVLSKMRQFGAVWGLIDEMRVENSELISPQV--FVILMRRFASARMVSKAIEVLD 208
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
EM G D Y + ++ LCK V EA + + M + P V +LL C+ G
Sbjct: 209 EMPKYGCEVDEYVFGCLLDALCKNGSVKEAASLFEDM-RYKFTPTVKHFTSLLYGWCKEG 267
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
L +AK V+ +M G+E ++ + +L G ++G+A LL+EM +K P ++++
Sbjct: 268 KLVEAKHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYT 327
Query: 190 NIICCMCQKGLINEALEL 207
+I +C+ + EA+ +
Sbjct: 328 VLIQSLCKHEKLEEAMRM 345
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + ++ K+E + + ++N+M++ G PD+ Y IV+ G+
Sbjct: 384 MKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVIRLACKLGE 443
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG--CKPNVVTC 118
+ L++EM GL P + T+ + ING +Q + EA + M+ G P T
Sbjct: 444 VKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRGLFAAPQYGTL 503
Query: 119 NTLLGALCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ +L A L AK + KG E+N+ + I + L K + EA +M+
Sbjct: 504 KELMNSLLRAEKLEMAKDTWSCITSSKGCEMNVGAWTIWIHALFSKGHVKEACSFCIDMM 563
Query: 178 KKCFYPRSSTFDNII 192
P+ TF ++
Sbjct: 564 DNDLMPQPDTFAKLM 578
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 67 LFDEMLVLG---LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L DEM V + P V+ + + V +AI+++D M K GC+ + LL
Sbjct: 170 LIDEMRVENSELISPQVFV--ILMRRFASARMVSKAIEVLDEMPKYGCEVDEYVFGCLLD 227
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC+ G + +A + ++M K H + +L G + ++ EA +L +M P
Sbjct: 228 ALCKNGSVKEAASLFEDMRYKFTPTVKH-FTSLLYGWCKEGKLVEAKHVLVQMKDAGIEP 286
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+N++ Q G + +A +L+K++ K P A ++ L+
Sbjct: 287 DIVVFNNLLGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLI 330
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ KE +A ++ M ++G+ PDVV Y ++ G K +
Sbjct: 158 PDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHV 217
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP----------NVVT 117
+ +GL P+ +YN+ ING CK VDEA+ + + M G P NV+T
Sbjct: 218 LSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVIT 277
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N+ L ALC+ + KA +K++ G++ ++TY I++DGL + + A ++ +++L
Sbjct: 278 YNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLL 337
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K + T++ +I +C +GL ++A+ L++K+ P +E ++
Sbjct: 338 IKGYKVTVWTYNIMINGLCLEGLFDQAMILLEKMEENGCIPDVVTYETII 387
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + ++ + A ++L+ + + G+ P+ Y I+++G
Sbjct: 186 MMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKM 245
Query: 61 YVKLDELFDEMLVLGLIPD----------VYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+ LF+EM G+ PD V TYN +++ LCK ++VD+AI V + G
Sbjct: 246 VDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHG 305
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
+P + T N L+ LC+ L A+ + +++ +KG ++ + TY IM++GL + +A
Sbjct: 306 IQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDQAM 365
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+LLE+M + P T++ II + + + A +L+++++A+
Sbjct: 366 ILLEKMEENGCIPDVVTYETIIRALFKNDENDRAEKLLREMIAR 409
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K + +AL +L ++ + DVV Y+ ++ + + +
Sbjct: 49 LGFHLDQVSYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTE 108
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L+ EM+ + PDV T++ I G C ++ EA + M+ P+V T N L+
Sbjct: 109 AYVLYSEMITKRISPDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVD 168
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
A C+ G+ +AK V+ M +GV ++ TY ++DG ++ +A +L + + P
Sbjct: 169 AFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTP 228
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+++++ II C+ +++EAL L ++ + AP
Sbjct: 229 NANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAP 263
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
LF ++L +G PD+ T+N I GLC KV EA+ D +I LG + V+ TL+ L
Sbjct: 6 SLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGL 65
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G ++A V++++ K V ++ Y ++D L + EA +L EM+ K P
Sbjct: 66 CKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPDV 125
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF +I C G + EA L ++V K+ P + L+
Sbjct: 126 VTFSALIYGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILV 167
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+GF P ++ F +I+ L + +AL+ + + G D V Y +++G+ G
Sbjct: 13 KVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGKTT 72
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ ++ ++ + DV Y+ I+ LCK V EA + MI P+VVT + L+
Sbjct: 73 EALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKRISPDVVTFSALI 132
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G L +A G+ EM LK + +++T+ I++D + EA ++ M+K+
Sbjct: 133 YGFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVI 192
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +++ C +N+A ++ I P A ++ ++
Sbjct: 193 PDVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIII 237
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 80/146 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ + + L K + A+ + ++K GI+P + Y I++ G+ E
Sbjct: 266 MHDRGQHANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVR 325
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G V+TYN+ INGLC + D+A+ +++ M + GC P+VVT T
Sbjct: 326 LENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDQAMILLEKMEENGCIPDVVTYET 385
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL + + +A+ +++EM +G+
Sbjct: 386 IIRALFKNDENDRAEKLLREMIARGL 411
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+D A + ++K+G +P+++T NTL+ LC G + +A + G L+ +Y
Sbjct: 1 MDFAFSLFGKILKVGFQPDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGT 60
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+++GL + EA +L ++ K + II +C+ L+ EA L +++ K
Sbjct: 61 LINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKDKLVTEAYVLYSEMITKR 120
Query: 216 FAPGARAWEALL 227
+P + AL+
Sbjct: 121 ISPDVVTFSALI 132
>Medtr5g089850.1 | PPR containing protein | HC |
chr5:39081850-39080081 | 20130731
Length = 502
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 16/221 (7%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +GFCP F ++ ++E +A + N+M Q G+ PD++ ++ ++ G+
Sbjct: 167 MLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGE 226
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F++M +GL+PD Y + ING C+ N V A+++ + M++ C +VVT NT
Sbjct: 227 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNT 286
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG----------------LVGKA 164
LL LC L A + KEM +GV + +T ++ G + ++
Sbjct: 287 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRS 346
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
E+ +A L +M+ + +P +F +I C GL++E+L
Sbjct: 347 EMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESL 387
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G PG+ + +I L KE A +L++M G PD + VL + D
Sbjct: 132 MEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKED 191
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +F+EML G++PD+ +++ I + ++ A+ + M +G P+ V
Sbjct: 192 VWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 251
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C D+S A V EM + +++ TY +L+GL + +A L +EM+++
Sbjct: 252 LINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 311
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA-WEALL 227
+P T +I C+ G + +AL L + I +S A+ W ++
Sbjct: 312 VFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMI 359
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 113/218 (51%), Gaps = 6/218 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+RK GFC + ++ +VK L++M+ G+KP + Y +++G+ EG
Sbjct: 103 LRKRGFCVSINACNALLGSIVK------VRVYLSEMEAKGLKPGLFTYNALINGLCKEGG 156
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y + D+ML +G PD T+N + ++ V EA ++ + M++ G P++++ ++
Sbjct: 157 YESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSS 216
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++G G+L +A ++M G+ + Y I+++G ++ A + EM+++
Sbjct: 217 IIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERS 276
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T++ ++ +C+ ++++A EL K++V + P
Sbjct: 277 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 44/262 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ +G P + +T +I + AL + N+M + DVV Y +L+G+
Sbjct: 237 MKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKM 296
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS--------------- 105
DELF EM+ G+ PD YT I+G CK + +A+ + ++
Sbjct: 297 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWR 356
Query: 106 -MIKLGCKPNVVTCNTLLGALC--------------EAGDLSKAKGVMKEMGLKGVELN- 149
MI P+ ++ + L+ C AG++SKA + M +GV +
Sbjct: 357 DMISREIFPHYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDC 416
Query: 150 -------------LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
L TY +L G + EA ++L +M+ K P ST+ ++I
Sbjct: 417 ITYNTLINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYV 476
Query: 197 QKGLINEALELMKKIVAKSFAP 218
K + EA + +++ + F P
Sbjct: 477 SKDNMKEAFRVHDEMLQRGFVP 498
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 112/200 (56%), Gaps = 1/200 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K+ P ++ + +I L K+ +A + +M ++GI+ DV Y ++ G + G
Sbjct: 201 MKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGR 260
Query: 61 YVKLDELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +L DEM+V G + PDVYT+N+ I+GLCK +V EA +V MIK G KP++V+ N
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYN 320
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ C +G + +AK V +M + N+ +Y +++G + EA +LL EM K
Sbjct: 321 ALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK 380
Query: 180 CFYPRSSTFDNIICCMCQKG 199
P + T++ ++ + + G
Sbjct: 381 NLVPDTVTYNCLLDGLSKSG 400
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 96/185 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K +A+ +L +M + PD V Y +L G+ G + +L
Sbjct: 349 PNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDL 408
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ M G D+ TYNV ++ K K D+A+ + +I++G PN+ T N LL LC+
Sbjct: 409 VEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCK 468
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G L AK + + + KG + N+ TY IM+ GL + + EA LL +M+ + P T
Sbjct: 469 SGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYIT 528
Query: 188 FDNII 192
FD I+
Sbjct: 529 FDTIV 533
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+GF V T +++ L + R ++A+ +L++ G + D VCY +++G+ G
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
++F +M + + P++ YN I+GLCKQ VDEA + M++ G + +V + N+++
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 123 GALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
C G A ++ EM ++G V +++T+ I++DGL + EA ++ M+K+ +
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P +++ ++ C G + EA ++ K+V ++ P ++ L+
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLI 358
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F+ +I + + A +L + + G + DV T ++ G+ +G ++ L
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
E + G D Y INGLCK K +AIQ+ M K+ PN++ NT++ LC+
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKCFYPRSS 186
G + +A G+ EM G+EL++++Y M+ G A LL+EM ++ YP
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+ +I +C+ G ++EA ++ ++ + + P ++ AL+
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALM 323
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I L K R +A ++ M + G KPD+V Y +++G G + ++
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD+M+ +P+V +Y ING CK VDEA+ ++ M P+ VT N LL L +
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSK 398
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +++ M G +L TY ++LD + +A L + +++ P T
Sbjct: 399 SGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRT 458
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ ++ +C+ G + A E+ + + AK P R + ++
Sbjct: 459 YNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMI 498
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 3/235 (1%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V + MI R A+ +L++M G + PDV + I++ G+ G + +
Sbjct: 245 VYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVV 304
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
M+ G PD+ +YN +NG C V EA Q+ D M++ PNV++ TL+ C+
Sbjct: 305 AVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKV 364
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+ +A ++ EM K + + TY +LDGL L+E M T+
Sbjct: 365 RMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITY 424
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTF 241
+ ++ + ++AL L + I+ +P R + LL L L Y++ F
Sbjct: 425 NVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIF 479
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + ++ L K R + ++ M+ G D++ Y ++L
Sbjct: 377 MHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K LF ++ +G+ P++ TYN+ ++GLCK ++ A +I + GC+PN+ T N
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNI 496
Query: 121 LLGALCEAGDLSKAKGVMKEM 141
++ LC+ G L +A+ ++ +M
Sbjct: 497 MIHGLCKEGFLDEAEALLYKM 517
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G ++ + ++ K E+ AL + + + GI P++ Y I+L G+ G
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F + G P++ TYN+ I+GLCK+ +DEA ++ M+ PN +T +T
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531
Query: 121 LLGAL 125
++ A+
Sbjct: 532 IVRAI 536
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 46/266 (17%)
Query: 3 KLGFCPGVMDFTDMI----RFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVA 57
KLG P ++ + +I RF+ G+DA Y ILN+MK+ GI PDVV Y + SG V
Sbjct: 35 KLGLNPDIITYNTLIDGYCRFV-----GIDAAYNILNRMKEAGINPDVVSYNSLSSGAVR 89
Query: 58 EGDYVKLDELFDEMLVLGLIPDVY------------------------------------ 81
+ K +LFDEML G+ PDV+
Sbjct: 90 KCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMA 149
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
+YNV INGLCK V+ A+ + ++ + G P V+T N ++ LC+A L+ A+ V+ E
Sbjct: 150 SYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEF 209
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
G E N TY ++ + + +L EM +K F + ++ + + G I
Sbjct: 210 CDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRI 269
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
EA E+ +K+++ P ++ ++
Sbjct: 270 EEADEIAEKMMSNGLVPDLASYNTMI 295
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GF P + +T +++ + R L IL++M++ G D Y V++ +V G +
Sbjct: 212 FGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEE 271
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
DE+ ++M+ GL+PD+ +YN IN C+Q + DEA+++VD + K G K + T ++
Sbjct: 272 ADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIH 331
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC+ G+ A+ + M G NL + +LD L +I +A + + M K +
Sbjct: 332 GLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVKDSFT 391
Query: 184 RSSTFDNIICCMCQKGLINEAL 205
+S N+ C +K I L
Sbjct: 392 YTSLLHNL--CRAKKFRIASKL 411
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEG 59
M + G P V + ++ + + +A + + + G I P + Y ++++G+ G
Sbjct: 103 MLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNG 162
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
LF + G +P+V TYN INGLCK ++ +A ++++ G +PN +T
Sbjct: 163 YVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYT 222
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
T++ G L + ++ EM KG + Y ++ LV I EA + E+M+
Sbjct: 223 TVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSN 282
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P ++++ +I C++G +EAL L+ +I
Sbjct: 283 GLVPDLASYNTMINLFCRQGRFDEALRLVDEI 314
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+R+ GF P V+ + MI L K R DA +LN+ G +P+ + YT V+ G
Sbjct: 174 LRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGR 233
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+ EM G D + Y + L K +++EA +I + M+ G P++ + NT
Sbjct: 234 LEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNT 293
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C G +A ++ E+ +G++ + +T+ I++ GL A L+ M
Sbjct: 294 MINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLG 353
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
F F++I+ C+ + G I++A+++ + K
Sbjct: 354 FGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVK 387
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ GF + ++ LVK R +A I +M +G+ PD+ Y +++ +G
Sbjct: 244 MRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGR 303
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + L DE+ G+ D YT+ + I+GLCK + A + +D M LG N+V N+
Sbjct: 304 FDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNS 363
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L L +AGD+ KA V M +K + TY +L L + AS LL ++
Sbjct: 364 ILDCLGKAGDIDKAVKVFDSMEVK----DSFTYTSLLHNLCRAKKFRIASKLLVASIEDG 419
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
F +T +I + GL+ EA ++ KI
Sbjct: 420 FQILRATQRAVIDGLTTSGLVYEARKVKLKI 450
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 49 TIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 108
I +S + K + + + + LGL PD+ TYN I+G C+ +D A I++ M +
Sbjct: 11 NITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKE 70
Query: 109 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 168
G P+VV+ N+L L K+ + EM G+ ++ +Y I++ + E
Sbjct: 71 AGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEE 130
Query: 169 ASLLLEEMLKKC-FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
A+ + ++ ++ YP ++++ +I +C+ G +N AL L + + + F P + A++
Sbjct: 131 ANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMI 190
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++ ++ R A +L +M+ ++P+ Y+ +L+ +G+
Sbjct: 342 MEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGE 401
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K ++ EM + G+ PD + YNV I+ K N +D A+ + M+ G +P+ VT NT
Sbjct: 402 WQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNT 461
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++G S+A+ + +EM G + TY IM++ + + + LL +M +
Sbjct: 462 LIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQG 521
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ ++ + G N+A+E ++ + + F P + + AL+
Sbjct: 522 LLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALI 568
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +I L R ++A + ++K++G++P Y +L G V G
Sbjct: 276 GLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDA 335
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + EM G++PD +TY++ ++ + + A ++ M +PN + +L +
Sbjct: 336 EFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILAS 395
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G+ K+ V+KEM + GV+ + H Y +M+D + A E ML + P
Sbjct: 396 YRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPD 455
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ T++ +I C C+ G + A EL +++ ++P
Sbjct: 456 TVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSP 489
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNV 85
+ +L +MK G++PD Y +++ G Y LD F+ ML G+ PD T+N
Sbjct: 405 SFQVLKEMKMSGVQPDRHFYNVMIDTF---GKYNCLDHAMATFERMLSEGIRPDTVTWNT 461
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+ CK + A ++ + M + G P V+T N ++ ++ + ++ +M +G
Sbjct: 462 LIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQG 521
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N TY ++D +A LE + F P S+ ++ +I Q+GL ++A+
Sbjct: 522 LLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAV 581
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSD 233
+ + A+ P A +L+ G D
Sbjct: 582 NAFRMMAAEGLTPSLLALNSLINAFGED 609
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G+ P VM + MI + +ER +L++M+ G+ P+ V YT ++ G
Sbjct: 482 MQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGR 541
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E + + +G P YN IN ++ D+A+ M G P+++ N+
Sbjct: 542 FNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNS 601
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ A E ++A V++ M GV+ ++ TY ++ L+ + + + EEM+
Sbjct: 602 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 658
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I K R A + +M+Q G P V+ Y I+++ + A+ + ++
Sbjct: 451 GIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERV 510
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++L +M GL+P+ TY ++ K + ++AI+ ++ + +G KP N L+ A
Sbjct: 511 NDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINA 570
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G +A + M +G+ +L +++ EA +L+ M + P
Sbjct: 571 YAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 630
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
T+ ++ + + ++ + +++V P +A
Sbjct: 631 VVTYTTLMKALIRVDKFHKVPAVYEEMVMSGCTPDRKA 668
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + +T ++ K R DA+ L +K G KP Y +++ G
Sbjct: 517 MQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGL 576
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F M GL P + N IN + + EA ++ M + G KP+VVT T
Sbjct: 577 SDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 636
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG 145
L+ AL K V +EM + G
Sbjct: 637 LMKALIRVDKFHKVPAVYEEMVMSG 661
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG--DYVKLDELFDEMLVLGLIPDVYTYNVY 86
AL ++++M++DG +PD + Y+ ++ + D L +L+ E+ + D + N
Sbjct: 193 ALNLMSRMRRDGFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDI 252
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I G K A+ + G P T ++ AL +G +A+ + +E+ G+
Sbjct: 253 ILGFSKAGDATRAMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGL 312
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
E Y +L G V + +A ++ EM K P T+ ++ G A
Sbjct: 313 EPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARI 372
Query: 207 LMKKIVAKSFAPGARAWEALL 227
++K++ A + P + + +L
Sbjct: 373 VLKEMEASNLQPNSFIYSRIL 393
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P ++ ++ R A +L +M+ ++P+ Y+ +L+ +G+
Sbjct: 342 MEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGE 401
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K ++ EM + G+ PD + YNV I+ K N +D A+ + M+ G +P+ VT NT
Sbjct: 402 WQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNT 461
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C++G S+A+ + +EM G + TY IM++ + + + LL +M +
Sbjct: 462 LIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQG 521
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ ++ + G N+A+E ++ + + F P + + AL+
Sbjct: 522 LLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALI 568
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +I L R ++A + ++K++G++P Y +L G V G
Sbjct: 276 GLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKDA 335
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + EM G++PD +TY++ ++ + + A ++ M +PN + +L +
Sbjct: 336 EFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILAS 395
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G+ K+ V+KEM + GV+ + H Y +M+D + A E ML + P
Sbjct: 396 YRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPD 455
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ T++ +I C C+ G + A EL +++ ++P
Sbjct: 456 TVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSP 489
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 6/208 (2%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNV 85
+ +L +MK G++PD Y +++ G Y LD F+ ML G+ PD T+N
Sbjct: 405 SFQVLKEMKMSGVQPDRHFYNVMIDTF---GKYNCLDHAMATFERMLSEGIRPDTVTWNT 461
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I+ CK + A ++ + M + G P V+T N ++ ++ + ++ +M +G
Sbjct: 462 LIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQG 521
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ N TY ++D +A LE + F P S+ ++ +I Q+GL ++A+
Sbjct: 522 LLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAV 581
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSD 233
+ + A+ P A +L+ G D
Sbjct: 582 NAFRMMAAEGLTPSLLALNSLINAFGED 609
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G+ P VM + MI + +ER +L++M+ G+ P+ V YT ++ G
Sbjct: 482 MQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGKSGR 541
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E + + +G P YN IN ++ D+A+ M G P+++ N+
Sbjct: 542 FNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGLSDQAVNAFRMMAAEGLTPSLLALNS 601
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ A E ++A V++ M GV+ ++ TY ++ L+ + + + EEM+
Sbjct: 602 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFHKVPAVYEEMV 658
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 99/218 (45%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I K R A + +M+Q G P V+ Y I+++ + A+ + ++
Sbjct: 451 GIRPDTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERV 510
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++L +M GL+P+ TY ++ K + ++AI+ ++ + +G KP N L+ A
Sbjct: 511 NDLLSKMQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINA 570
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G +A + M +G+ +L +++ EA +L+ M + P
Sbjct: 571 YAQRGLSDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 630
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
T+ ++ + + ++ + +++V P +A
Sbjct: 631 VVTYTTLMKALIRVDKFHKVPAVYEEMVMSGCTPDRKA 668
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + +T ++ K R DA+ L +K G KP Y +++ G
Sbjct: 517 MQSQGLLPNAVTYTTLVDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYAQRGL 576
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F M GL P + N IN + + EA ++ M + G KP+VVT T
Sbjct: 577 SDQAVNAFRMMAAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 636
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKG 145
L+ AL K V +EM + G
Sbjct: 637 LMKALIRVDKFHKVPAVYEEMVMSG 661
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG--DYVKLDELFDEMLVLGLIPDVYTYNVY 86
AL ++++M++DG +PD + Y+ ++ + D L +L+ E+ + D + N
Sbjct: 193 ALNLMSRMRRDGFQPDFINYSSIIKSLTRSNRIDSPILQKLYAEIESDKIEADGHLLNDI 252
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I G K A+ + G P T ++ AL +G +A+ + +E+ G+
Sbjct: 253 ILGFSKAGDATRAMHFLAVAQGKGLSPKSGTLAAVILALGNSGRTIEAEALFEEIKENGL 312
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
E Y +L G V + +A ++ EM K P T+ ++ G A
Sbjct: 313 EPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARI 372
Query: 207 LMKKIVAKSFAPGARAWEALL 227
++K++ A + P + + +L
Sbjct: 373 VLKEMEASNLQPNSFIYSRIL 393
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 1 MRKLGFC---PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
++++G C P + T +++ L R ++A L+ M Q G PD+V Y+ + G+V
Sbjct: 508 LKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVN 567
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ ++F ++ G PDV +NV I GLCK N+ EA + ++K G P+VVT
Sbjct: 568 IQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVT 627
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N + C+ G++ KA + M + ++ TY ++DG + +A LL +EM
Sbjct: 628 YNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEME 687
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDL 234
K P TF +I +C+ EAL ++++ K P + + ALL SDL
Sbjct: 688 KNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDL 744
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P ++ ++ I LV + A+ I + G PDVVC+ +++ G+
Sbjct: 546 MTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNR 605
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++LF E++ GL P V TYN++I+ CK VD+A+ + M K P+VVT T
Sbjct: 606 FTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTT 665
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ A + KEM G N T+ ++ GL EA L EM +K
Sbjct: 666 LVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPTEALCYLREMQQKE 725
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P S + ++ + A E+ +++V F P
Sbjct: 726 MKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGFFP 763
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ P ++ + ++I L K R + +L +MK+ GI+P Y + + D
Sbjct: 441 MRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKD 500
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ EM G P + + + LC +V EA + +D+M + G P++V+ +
Sbjct: 501 VSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSA 560
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+G L ++ A + K++ G ++ + +++ GL EA L E++K+
Sbjct: 561 AIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRG 620
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ I C C+ G +++A+ + ++ + P + L+
Sbjct: 621 LSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDKVPSVVTYTTLV 667
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F+ +I +K ++ AL + N M++ KP ++ Y ++ + K EL
Sbjct: 413 PNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYEL 472
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM LG+ P +TYN LCK+ V A ++ M G P + L+ LC+
Sbjct: 473 LREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCD 532
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +A + M +G ++ +Y + GLV E+ A + +++ P
Sbjct: 533 HGRVIEACEFLDNMTQQGFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVC 592
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
F+ +I +C+ EA +L ++V + +P
Sbjct: 593 FNVLIRGLCKVNRFTEAEDLFHELVKRGLSPS 624
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 50 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
++ S + D ++D F + + + P++ ++++ I+G K +++D A+ + + M +
Sbjct: 386 MIQSKSSTDSDENRMDVFFKTVKRM-VFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRF 444
Query: 110 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
KP ++ N L+ +LC++ L K+ +++EM G+E TY + L + ++ A
Sbjct: 445 VDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAA 504
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
++L+EM P ++ +C G + EA E + + + F P ++ A
Sbjct: 505 CVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLPDIVSYSA 560
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYVK 63
F PG F +R L A + ++M + G+ PD + +L I G
Sbjct: 111 SFTPGAFSF--FLRCLGNLRLVHQANQLFDEMSRKGLFVPDRYSHNTLLEVISKCGLVDL 168
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
++ +EM G D YT I C + D+A+ + M + G V C+ +
Sbjct: 169 MEMRLNEMKGFGWEFDKYTLTPVIVTYCNAQRFDQALSVYKEMEEKGWVDERV-CSMMAL 227
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK-CFY 182
+ G++ KA +++ MG G+ L+ T+ +++ G V ++ + +A L ++M ++ F
Sbjct: 228 CFSKLGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFT 287
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKI 211
P S +D +I +C+ + A+ L ++
Sbjct: 288 PDVSLYDVLIGGLCKNKDTDRAISLFSEM 316
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G+ T +I +R AL + +M++ G + VC + L G+
Sbjct: 176 MKGFGWEFDKYTLTPVIVTYCNAQRFDQALSVYKEMEEKGWVDERVCSMMALC-FSKLGE 234
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC-KPNVVTCN 119
K EL + M G+ T+ V I+G K+++VD+A+Q+ D M + P+V +
Sbjct: 235 VDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYD 294
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+G LC+ D +A + EM GV ++ ++ + L ++
Sbjct: 295 VLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEE 354
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
++ ++ C GL++EA L++ ++
Sbjct: 355 DEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMI 387
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 56/239 (23%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL-GLIPDVYTYNVYI 87
A ++ +M + G++ + +++ G V E K +LFD+M PDV Y+V I
Sbjct: 238 AFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYDVLI 297
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNV------VTC----------------------- 118
GLCK D AI + M + G +P++ ++C
Sbjct: 298 GGLCKNKDTDRAISLFSEMKEFGVRPDIGILTKLISCFSDSKSMVSRLLEEIPEGEEDEQ 357
Query: 119 ------NTLLGALCEAGDLSKAKGVMKEM----------------GLKGVEL----NLHT 152
N LL G + +A +++ M K V+ N+ +
Sbjct: 358 TLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFPNITS 417
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+ I++DG + ++ A L +M + P ++N+I +C+ + ++ EL++++
Sbjct: 418 FSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREM 476
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 1/194 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQ-MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
P + + +I V R +A +L Q M G +PD + I++ G+ +G V E
Sbjct: 275 PNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALE 334
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+EM+ G P+V TY + ING CK K+ +A Q+ M GCKP++ T N+L+ LC
Sbjct: 335 FLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIYGLC 394
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + +A G+ +M L+GV N TY ++ + I +A L+ EML + F +
Sbjct: 395 KNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNI 454
Query: 187 TFDNIICCMCQKGL 200
T++ +I +C+ GL
Sbjct: 455 TYNGLIKALCKTGL 468
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P F MI L K+ + AL LN+M + G +P+V+ YTI+++G +G
Sbjct: 308 GFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDA 367
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+++ EM G PD+YT+N I GLCK +K++EA+ + M G N +T NTL+ A
Sbjct: 368 FQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHA 427
Query: 125 ----------------------------------------LCEAGDLSKAKGVMKEMGLK 144
LC+ + + G+ +M L+
Sbjct: 428 FLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLE 487
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
GV N TY ++ + I +A L+ EML + F + T++ +I +C+ G I +
Sbjct: 488 GVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKG 547
Query: 205 LELMKKIVAKSFAPGARA 222
L L++++ K P +
Sbjct: 548 LGLIEEMFGKGIFPSINS 565
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L K ++ + L + + M +G+ + + Y ++ + + +L +EML G D
Sbjct: 468 LCKNDKMEETLGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLD 527
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
TYN I LCK +++ + +++ M G P++ +CN L + C G ++ A ++
Sbjct: 528 NITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLR 587
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+M +G+ ++ TY +++GL I EA L + + P + T++ +I C +
Sbjct: 588 DMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYED 647
Query: 200 LINEALELMKKIVAKSFAPGARAWEALL 227
L N+A L+ K V+ F P W L+
Sbjct: 648 LFNDACLLLFKGVSNGFIPNEITWSILI 675
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQ 101
P+ V Y +++G VA G + + D L+ M++ G PD + +N+ I+GLCK+ + A++
Sbjct: 275 PNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALE 334
Query: 102 IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV 161
++ M++ G +PNV+T L+ C+ G + A + EM KG + +++T+ ++ GL
Sbjct: 335 FLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIYGLC 394
Query: 162 GKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++ EA L +M + + T++ +I + I +A +L+ +++ + F
Sbjct: 395 KNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGF 449
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 5/232 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F +I L K ++ +AL + + M +G+ + + Y ++ +
Sbjct: 374 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDS 433
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYI-----NGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ +L +EML G D TYN I GLCK +K++E + + M G N
Sbjct: 434 IQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANT 493
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
+T NTL+ A + +A ++ EM +G L+ TY ++ L I + L+EE
Sbjct: 494 ITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEE 553
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M K +P ++ + + C G +N+AL ++ ++ + P + +L+
Sbjct: 554 MFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLI 605
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 16/234 (6%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVL-----------SG 54
F P + ++ LV A + M GI P V + IV+ G
Sbjct: 161 FEPTFKSYNVVLEILVSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFCMTFNDVIHG 220
Query: 55 IVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
+ G + +L D ML+ G D Y + GLC+ +VDEA +++ S I PN
Sbjct: 221 LCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEA-RVLLSKIP---NPN 276
Query: 115 VVTCNTLLGALCEAGDLSKAKGVM-KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
V NTL+ +G +AK ++ + M + G E + + IM+DGL K + A L
Sbjct: 277 TVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALEFL 336
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
EM++K F P T+ +I C+ G I +A ++ ++ +K P + +L+
Sbjct: 337 NEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLI 390
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G + + +I ++ + A ++N+M G D + Y ++ + G K
Sbjct: 488 GVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKG 547
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +EM G+ P + + N+ N C KV++A++ + MI G P++VT N+L+
Sbjct: 548 LGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLTPDIVTYNSLING 607
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G + +A + + +G+ N TY ++ + +A LLL + + F P
Sbjct: 608 LCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFNDACLLLFKGVSNGFIPN 667
Query: 185 SSTFDNIICCMCQK 198
T+ +I C +K
Sbjct: 668 EITWSILINCFVKK 681
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DAL L M G+ PD+V Y +++G+ G + LF+ + G+ P+ TYN I
Sbjct: 581 DALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLI 640
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ C ++ ++A ++ + G PN +T + L+ + ++ G
Sbjct: 641 SSFCYEDLFNDACLLLFKGVSNGFIPNEITWSILINCFVKKYQRDYPPSIIDNTG----- 695
Query: 148 LNLHTY--RIMLDGLVGK 163
LN+H + ++ G +G+
Sbjct: 696 LNIHLFLKQVHKSGSIGR 713
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 116/234 (49%), Gaps = 2/234 (0%)
Query: 5 GFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
G C P + ++ +I K R A+ + ++MK++G++P YT ++ G +
Sbjct: 225 GHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEE 284
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L EM + +P VYTY I GL K +V++A + +M+K GCKP+VV N L+
Sbjct: 285 ALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLIN 344
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-GKAEIGEASLLLEEMLKKCFY 182
L + L +A + +EM L N+ TY ++ L KA EAS LE M K
Sbjct: 345 ILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVV 404
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTY 236
P S T+ +I C+ + +AL L++++ K F P A+ +L+ G Y
Sbjct: 405 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRY 458
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P +T ++ K + +AL ++++M+ P V YT ++ G+ G
Sbjct: 257 MKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGR 316
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ ML G PDV N IN L + +++ EA+++ + M L C PNVVT NT
Sbjct: 317 VEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376
Query: 121 LLGALCE-AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ +L E S+A ++ M GV + TY I++DG + +A LLLEEM +K
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
F P + + ++I + + A EL +++ + R + ++ H G ++E
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEA 496
Query: 240 TFAGLFNQ 247
GLFN+
Sbjct: 497 M--GLFNE 502
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P ++ +I K R AL +L +M + G P Y +++ +
Sbjct: 398 MKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKR 457
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +ELF E+ V Y V I K + +EA+ + + M KLGC P+V N
Sbjct: 458 YEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNA 517
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + A + +A + + M G +++++ I+L+GL A + +M
Sbjct: 518 LITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSST 577
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P + +++ ++ C+ + GL EA +LMK++ +K F
Sbjct: 578 IKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGF 613
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
MI+ K R +A+ + N+MK+ G PDV Y +++G+V + LF M G
Sbjct: 483 MIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENG 542
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
PD+ ++N+ +NGL + A+++ M KP+ V+ NT+LG L AG +A
Sbjct: 543 CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEAT 602
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
+MKEM KG E +L TY +L+ VGK +
Sbjct: 603 KLMKEMNSKGFEYDLITYSSILEA-VGKVD 631
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
G + +++++ L + + AL I Q+K +P Y V+ ++ EG + K+ EL+
Sbjct: 159 GPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELY 218
Query: 69 DEMLVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EM G PD TY+ I+ K N+ D A+++ D M + G +P TL+G +
Sbjct: 219 NEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFK 278
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + +A ++ EM ++ ++TY ++ GL + +A + + MLK P
Sbjct: 279 LGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVL 338
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+N+I + + + EA+EL +++ + P + ++
Sbjct: 339 MNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTII 378
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P V +T++IR L K R DA + M +DG KPDVV +++ I+ D
Sbjct: 292 MRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLIN-ILGRSD 350
Query: 61 YVKLD-ELFDEMLVL------------------------------------GLIPDVYTY 83
+K ELF+EM +L G++P +TY
Sbjct: 351 RLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTY 410
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
++ I+G CK N+V++A+ +++ M + G P +L+ +L +A A + +E+
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
++ Y +M+ EA L EM K P ++ +I M + +++E
Sbjct: 471 NCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDE 530
Query: 204 ALELMK 209
A L +
Sbjct: 531 AFSLFR 536
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 67/125 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+KLG P V + +I +V+ + +A + M+++G PD+ + I+L+G+ G
Sbjct: 503 MKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGG 562
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E+F +M + PD +YN + L + +EA +++ M G + +++T ++
Sbjct: 563 PKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSS 622
Query: 121 LLGAL 125
+L A+
Sbjct: 623 ILEAV 627
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 114/219 (52%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ +I L KE+ +A + +QM I PDVV + ++ G G ++ LF
Sbjct: 210 NVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLF 269
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
EM++ + P+VYT+N+ ++ LCK+ + A ++ M+K G PNVVT ++++ C
Sbjct: 270 HEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLV 329
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
+++KAK V+ + GV + +Y IM++G I EA L EM + P + T+
Sbjct: 330 NEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTY 389
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++I +C+ G I+ A E + ++ P + +L+
Sbjct: 390 SSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLI 428
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 109/215 (50%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I L K + +AL +L ++ + +V+ + ++ + E + EL+ +M+
Sbjct: 179 YAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMI 238
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
V + PDV T+N I G C ++ EA + M+ PNV T N L+ ALC+ G+L
Sbjct: 239 VKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLK 298
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
AK ++ M +GV N+ TY ++DG E+ +A +L + + P + +++ +I
Sbjct: 299 GAKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMI 358
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+ +INEA L ++ + +P + +L+
Sbjct: 359 NGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLI 393
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 7/227 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ L KE A +L M ++G+ P+VV Y+ ++ G + K +
Sbjct: 279 PNVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHV 338
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ +G+ PD +YN+ ING CK ++EA + + M G PN VT ++L+ LC+
Sbjct: 339 LSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCK 398
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +S A + EM G ++ TY ++D L + +A +L++++ + T
Sbjct: 399 LGRISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYT 458
Query: 188 FDNIICCMCQ-------KGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ +GL+NEA L+ K+ P A E ++
Sbjct: 459 YNILIDGLCKQGRLKDAQGLLNEAETLLSKMEDNGCVPDAVTCETII 505
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P +++F ++ LVK A+ + +Q++ +GI D V + I+++ G+
Sbjct: 67 PSILEFNKILGSLVKTNNNHYTAAISLSHQLELNGITADTVTFNILINCYCHLGEMTFAF 126
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F ++L LG P T+N ING+C K+ EA+ D M+ N VT L+ L
Sbjct: 127 SIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHEFHLNQVTYAKLINGL 186
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G ++A +++++ K V N+ + ++D L + + EA L +M+ K P
Sbjct: 187 CKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDV 246
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+++I C G + EA L ++V K+ P + L+
Sbjct: 247 VTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILV 288
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 107/204 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ F +I + ++A + ++M I P+V + I++ + EG+ L
Sbjct: 244 PDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNL 303
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G+IP+V TY+ ++G C N+V++A ++ ++ ++G P+ + N ++ C+
Sbjct: 304 LAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMINGFCK 363
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++A + EM +G+ N TY ++DGL I A ++EM P T
Sbjct: 364 IKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICT 423
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
++++I +C+ +++A+ L+KKI
Sbjct: 424 YNSLIDALCKNHHVDKAIVLVKKI 447
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++G P + MI K + +A + N+M+ GI P+ V Y+ ++ G+ G
Sbjct: 342 ITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGR 401
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E DEM G PD+ TYN I+ LCK + VD+AI +V + G + N+ T N
Sbjct: 402 ISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMYTYNI 461
Query: 121 LLGALCEAGDLSKAKGVMKE 140
L+ LC+ G L A+G++ E
Sbjct: 462 LIDGLCKQGRLKDAQGLLNE 481
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A I ++ + G P + + +++G+ G + D ML + TY IN
Sbjct: 125 AFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEALHFHDHMLAHEFHLNQVTYAKLIN 184
Query: 89 GLCKQNKVDEAIQ-------------------IVDS----------------MIKLGCKP 113
GLCK K EA+Q I+DS MI P
Sbjct: 185 GLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISP 244
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
+VVT N+L+ C G L +A G+ EM LK + N++T+ I++D L + + A LL
Sbjct: 245 DVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNLKGAKNLL 304
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M+K+ P T+ +I+ C +N+A ++ I P A+++ ++
Sbjct: 305 AVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVLSTITRMGVPPDAQSYNIMI 358
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + ++ +I L K R A +++M+ +G PD+ Y ++ +
Sbjct: 377 MRCRGISPNTVTYSSLIDGLCKLGRISYAWEFVDEMRDNGQPPDICTYNSLIDALCKNHH 436
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK-------VDEAIQIVDSMIKLGCKP 113
K L ++ G+ ++YTYN+ I+GLCKQ + ++EA ++ M GC P
Sbjct: 437 VDKAIVLVKKIKDQGIQLNMYTYNILIDGLCKQGRLKDAQGLLNEAETLLSKMEDNGCVP 496
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+ VTC T++ AL E +A+ +++EM +G+
Sbjct: 497 DAVTCETIIRALFENDKNERAEKLLREMIARGL 529
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G CP + + ++ F K+ D +++ + G++P+VV Y I++ + G
Sbjct: 276 MAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGY 335
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+D++ M + P + TYN+ +N LCK +D +I + M+ C P++VT NT
Sbjct: 336 SDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNT 395
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL ALC+ G + ++ ++ + L TY I+++GL I A + EM++K
Sbjct: 396 LLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKG 455
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMK 209
P T ++ +CQ EA+E+ K
Sbjct: 456 IDPDYITHRTLVWGLCQVYQFEEAVEIFK 484
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I L IL M + I P +V Y I+L+ + G +
Sbjct: 315 GMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRS 374
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ +M+ PD+ TYN +N LCK+ +DE+IQ++ S+ C P +VT N ++
Sbjct: 375 ISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVING 434
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + AK + EM KG++ + T+R ++ GL + EA + + M + +
Sbjct: 435 LARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIK 494
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C++ ++ A++ + +V P + + LL
Sbjct: 495 GYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLL 537
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 6/215 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKE---ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M + P ++ + ++ L K +R + +LYI +M + PD+V Y +L+ +
Sbjct: 346 MNETSISPTLVTYNILLNSLCKSGFLDRSI-SLYI--KMVSENCSPDIVTYNTLLNALCK 402
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
EG + +L + P + TYN+ INGL + + A ++ M++ G P+ +T
Sbjct: 403 EGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYIT 462
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
TL+ LC+ +A + K M G ++ + Y+ ++ GL + ++ A L+ M+
Sbjct: 463 HRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMV 522
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K P + ++ + +G++NEA +L ++++
Sbjct: 523 KAQCKPDGKIYYTLLKSVANEGMVNEANDLHQRLI 557
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 99/215 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +IR + + A+ + G P ++ Y +++ + +
Sbjct: 210 GCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRA 269
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ ++M G PD+ YN +N KQ + ++ +++ G +PNVVT N L+ +
Sbjct: 270 LEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHS 329
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L G ++K M + L TY I+L+ L + + L +M+ + P
Sbjct: 330 LSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPD 389
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
T++ ++ +C++G I+E+++L+ + + +PG
Sbjct: 390 IVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPG 424
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++ P T++IR L++ + I+N M G PD + + V+ + G
Sbjct: 136 MARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGH 195
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGL------------------------------ 90
E + M + G +PD TYN I +
Sbjct: 196 LKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYAL 255
Query: 91 -----CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
CK A+++++ M + GC P++ N+L+ + G+ V+ + G
Sbjct: 256 LVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHG 315
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ N+ TY I++ L +L+ M + P T++ ++ +C+ G ++ ++
Sbjct: 316 MQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSI 375
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L K+V+++ +P + LL
Sbjct: 376 SLYIKMVSENCSPDIVTYNTLL 397
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%)
Query: 51 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+L + + G L + M + IP + I GL + +VD+ +I++ M+ G
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG 175
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
P+ +T N ++G+LC+ G L A ++ M L G + TY ++ + K + A
Sbjct: 176 GVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAV 235
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
++ L+K F P T+ ++ +C+ + ALE+++ + + P + +L+ S
Sbjct: 236 SFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFS 295
Query: 231 GSDLTYSETTF 241
Y +T
Sbjct: 296 SKQGNYKDTAL 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P T ++ G++ G K ++ + M++ G +PD T+N I LCK+ + A++
Sbjct: 143 PHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEF 202
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++ M GC P+ T NT++ + + GD + A K+ KG L TY ++++ +
Sbjct: 203 LEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCK 262
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
A +LE+M ++ P + +++++ ++G + ++ +++ P
Sbjct: 263 HCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVT 322
Query: 223 WEALLLHSGSDLTYSE 238
+ +L+HS S YS+
Sbjct: 323 YN-ILIHSLSLHGYSD 337
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Query: 53 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 112
S + AEG +V+ EL T N + LC + K+ A ++V+ M ++
Sbjct: 97 STLSAEGQFVRNGEL--------------TSNKILQSLCSRGKLTAAARLVEVMARMSQI 142
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P+ +C L+ L G + K +M M + G + T+ ++ L + + A
Sbjct: 143 PHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEF 202
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
LE M P + T++ II C+ KG N A+ K + K F P
Sbjct: 203 LEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPP 248
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G CP + + ++ F K+ D +++ + G++P+VV Y I++ + G
Sbjct: 276 MAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGY 335
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+D++ M + P + TYN+ +N LCK +D +I + M+ C P++VT NT
Sbjct: 336 SDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNT 395
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL ALC+ G + ++ ++ + L TY I+++GL I A + EM++K
Sbjct: 396 LLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKG 455
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMK 209
P T ++ +CQ EA+E+ K
Sbjct: 456 IDPDYITHRTLVWGLCQVYQFEEAVEIFK 484
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I L IL M + I P +V Y I+L+ + G +
Sbjct: 315 GMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRS 374
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ +M+ PD+ TYN +N LCK+ +DE+IQ++ S+ C P +VT N ++
Sbjct: 375 ISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVING 434
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + AK + EM KG++ + T+R ++ GL + EA + + M + +
Sbjct: 435 LARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIK 494
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C++ ++ A++ + +V P + + LL
Sbjct: 495 GYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLL 537
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 6/215 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKE---ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M + P ++ + ++ L K +R + +LYI +M + PD+V Y +L+ +
Sbjct: 346 MNETSISPTLVTYNILLNSLCKSGFLDRSI-SLYI--KMVSENCSPDIVTYNTLLNALCK 402
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
EG + +L + P + TYN+ INGL + + A ++ M++ G P+ +T
Sbjct: 403 EGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYIT 462
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
TL+ LC+ +A + K M G ++ + Y+ ++ GL + ++ A L+ M+
Sbjct: 463 HRTLVWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMV 522
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
K P + ++ + +G++NEA +L ++++
Sbjct: 523 KAQCKPDGKIYYTLLKSVANEGMVNEANDLHQRLI 557
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 99/215 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +IR + + A+ + G P ++ Y +++ + +
Sbjct: 210 GCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRA 269
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ ++M G PD+ YN +N KQ + ++ +++ G +PNVVT N L+ +
Sbjct: 270 LEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHS 329
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L G ++K M + L TY I+L+ L + + L +M+ + P
Sbjct: 330 LSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPD 389
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
T++ ++ +C++G I+E+++L+ + + +PG
Sbjct: 390 IVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPG 424
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++ P T++IR L++ + I+N M G PD + + V+ + G
Sbjct: 136 MARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGH 195
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGL------------------------------ 90
E + M + G +PD TYN I +
Sbjct: 196 LKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYAL 255
Query: 91 -----CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
CK A+++++ M + GC P++ N+L+ + G+ V+ + G
Sbjct: 256 LVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHG 315
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ N+ TY I++ L +L+ M + P T++ ++ +C+ G ++ ++
Sbjct: 316 MQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSI 375
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L K+V+++ +P + LL
Sbjct: 376 SLYIKMVSENCSPDIVTYNTLL 397
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%)
Query: 51 VLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
+L + + G L + M + IP + I GL + +VD+ +I++ M+ G
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG 175
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEAS 170
P+ +T N ++G+LC+ G L A ++ M L G + TY ++ + K + A
Sbjct: 176 GVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAV 235
Query: 171 LLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
++ L+K F P T+ ++ +C+ + ALE+++ + + P + +L+ S
Sbjct: 236 SFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFS 295
Query: 231 GSDLTYSETTF 241
Y +T
Sbjct: 296 SKQGNYKDTAL 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQI 102
P T ++ G++ G K ++ + M++ G +PD T+N I LCK+ + A++
Sbjct: 143 PHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEF 202
Query: 103 VDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVG 162
++ M GC P+ T NT++ + + GD + A K+ KG L TY ++++ +
Sbjct: 203 LEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCK 262
Query: 163 KAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
A +LE+M ++ P + +++++ ++G + ++ +++ P
Sbjct: 263 HCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVT 322
Query: 223 WEALLLHSGSDLTYSE 238
+ +L+HS S YS+
Sbjct: 323 YN-ILIHSLSLHGYSD 337
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Query: 53 SGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 112
S + AEG +V+ EL T N + LC + K+ A ++V+ M ++
Sbjct: 97 STLSAEGQFVRNGEL--------------TSNKILQSLCSRGKLTAAARLVEVMARMSQI 142
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P+ +C L+ L G + K +M M + G + T+ ++ L + + A
Sbjct: 143 PHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEF 202
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
LE M P + T++ II C+ KG N A+ K + K F P
Sbjct: 203 LEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPP 248
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 114/212 (53%), Gaps = 3/212 (1%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P V + +I L K + +AL + +M KP+ V Y ++ G+ G
Sbjct: 109 KRRMTPYVFSYIIIINGLCKIKMVDEALNLFTEMH---CKPNTVTYNSLIDGLCKSGRIS 165
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
EL D+M G DV TYN +++ LCK ++VD+AI +V + G +PN+ T + L+
Sbjct: 166 HAWELLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILI 225
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A+ + +++ +KG ++ L TY IM++GL + EA LLE+M
Sbjct: 226 DGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCI 285
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T+ II + + ++A +L+++++A+
Sbjct: 286 PNAVTYATIIHALFKNDENDKAEKLLREMIAR 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 112/200 (56%), Gaps = 6/200 (3%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL-DELFDEMLVLGLIPDVYTYNVYINGL 90
+ N + + + P V Y I+++G+ +K+ DE + + P+ TYN I+GL
Sbjct: 103 VFNVIGKRRMTPYVFSYIIIINGLCK----IKMVDEALNLFTEMHCKPNTVTYNSLIDGL 158
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
CK ++ A +++D M G +V+T N+ L ALC+ + KA ++K++ +G++ N+
Sbjct: 159 CKSGRISHAWELLDQMHDRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNI 218
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
+TY I++DGL + + A ++ +++L K + T+ +I +C +GL +EA+ L++K
Sbjct: 219 NTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEK 278
Query: 211 IVAKSFAPGARAWEALLLHS 230
+ P A + A ++H+
Sbjct: 279 MEDNGCIPNAVTY-ATIIHA 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 81/146 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V+ + + L K + A+ ++ ++K GI+P++ Y+I++ G+ EG
Sbjct: 174 MHDRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCKEGR 233
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G ++TY + INGLC + DEA+ +++ M GC PN VT T
Sbjct: 234 LENAQVIFQDLLIKGYKVTLWTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNAVTYAT 293
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL + + KA+ +++EM +G+
Sbjct: 294 IIHALFKNDENDKAEKLLREMIARGL 319
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ +I L K++ +DA + +M I PDVV Y ++ G G L
Sbjct: 99 PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM + ++P+V ++N+ I+GLCK+ V ++ MIK KP+VVTC++L+
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+KA+ + M GV ++L +Y IM++GL + EA +L +EM K P + T
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I + + G I+ +L+ ++ A + + +LL
Sbjct: 279 YSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLL 318
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K P V+ + +I FLVK + A YI N M Q+G+ D+ Y I+++G+
Sbjct: 197 MIKQSVKPDVVTCSSLIDGYFLVK--KANKARYIFNAMAQNGVTIDLRSYNIMINGLSKA 254
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF EM + PD TY+ I+GL K ++ ++D M G NV+T
Sbjct: 255 KMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITY 314
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++LL LC++G A + ++ KG E N+ TY I++DGL + +A + ++L
Sbjct: 315 SSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLI 374
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEA 204
K + + +I +C++ L +EA
Sbjct: 375 KGYRLDVRLYTVMINGLCREALFDEA 400
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P V F +I L KE +L M + +KPDVV + ++ G
Sbjct: 162 MRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKK 221
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +F+ M G+ D+ +YN+ INGL K VDEA+ + M P+ +T +T
Sbjct: 222 ANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYST 281
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L + G +S ++ EM G N+ TY +L+ L A + ++ K
Sbjct: 282 LIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKG 341
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P T++ ++ +C+ G + +A E+ ++ K + R + ++
Sbjct: 342 FEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMI 388
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L ++ + G +PD V T +L G+ + K D+++ G D +Y IN
Sbjct: 29 AFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLIN 88
Query: 89 GLCKQNKVDEAIQIVDSMI--------------KLGCK-------PNVVTCNTLLGALCE 127
GLCK + Q + SMI L C+ P+VVT NTL+ C
Sbjct: 89 GLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCI 148
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L A + EM LK + N+ ++ I++DGL + ++ +L M+K+ P T
Sbjct: 149 VGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVT 208
Query: 188 FDNII 192
++I
Sbjct: 209 CSSLI 213
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G V+ ++ ++ L K A+ I ++K G +P++V Y I++ G+ G
Sbjct: 302 MRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGR 361
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+F ++L+ G DV Y V INGLC++ DEA GC PN VT
Sbjct: 362 LKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA---------YGCTPNAVTYEI 412
Query: 121 LLGAL 125
++ AL
Sbjct: 413 IIRAL 417
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M + G+ D+ ++ IN +++ A ++ ++K+G +P+ VT TLL LC +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE---------------------IGEA 169
+ KA ++ KG L+ +Y +++GL E + +A
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L EM+ K +P T++ +I C G + +A+ L ++ K+ P ++ L+
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILI 178
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 64/129 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + ++ +I L K R ++++M+ G +V+ Y+ +L+ + G + +
Sbjct: 274 PDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRI 333
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++ G P++ TYN+ ++GLCK ++ +A +I ++ G + +V ++ LC
Sbjct: 334 FTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCR 393
Query: 128 AGDLSKAKG 136
+A G
Sbjct: 394 EALFDEAYG 402
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR +G P V T + + L + + M + G P + + ++ G G
Sbjct: 243 MRDVGVRPSVTAMTILFKLLFRVGDYGTIWSLFKDMIRKGPAPSSITFNTMICGFCRRGK 302
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V + LF M G PDV+TYNV ING C A+ + M+K GC+P+V T NT
Sbjct: 303 VVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRGCEPSVSTFNT 362
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L +LC G++ +A+ + + GV N Y M+DG V +IG ASLL +EM K
Sbjct: 363 ILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKG 422
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P TF+ + + G + +L+ + F + D+T S
Sbjct: 423 VPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDCSLY---------DMTVSWHC 473
Query: 241 FAGLFNQ 247
+AG +Q
Sbjct: 474 WAGRLDQ 480
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P V+ F+ +I L K +A + +M G P+ Y ++ G G
Sbjct: 593 MKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGR 652
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ EM + GL+PD +T+N+ I+ C+Q + AI M ++G P++ T N
Sbjct: 653 MAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNI 712
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G C+A D+ +A ++ +M G+ ++ TY I + G ++ A +L+E++
Sbjct: 713 LVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNIRMHGYCSVRKMNRAIAILDELVSAG 772
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
P + T++ ++ +C +++ A+ + K++ F P LL H
Sbjct: 773 IVPNTVTYNTVMGGICSD-ILDRAMIVTAKLIKMGFIPNVITTNILLSH 820
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%)
Query: 26 GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
++AL ILN+M+ G++P V TI+ + GDY + LF +M+ G P T+N
Sbjct: 233 SLEALDILNRMRDVGVRPSVTAMTILFKLLFRVGDYGTIWSLFKDMIRKGPAPSSITFNT 292
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I G C++ KV + M K GC+P+V T N ++ C G+ S A G ++ M +G
Sbjct: 293 MICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRG 352
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
E ++ T+ +L L + + EA L + +L P ++ ++ ++ + I A
Sbjct: 353 CEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRAS 412
Query: 206 ELMKKIVAKSFAP 218
L K++ K P
Sbjct: 413 LLYKEMRIKGVPP 425
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + F + K R D +L + + G D Y + +S G
Sbjct: 418 MRIKGVPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDCSLYDMTVSWHCWAGR 477
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L + L +GL V +N I ++ D+A +I M+K G P+ TCN+
Sbjct: 478 LDQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNS 537
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL LC G L +A+ ++ M KG + Y ++ DG ++ A + +EM ++
Sbjct: 538 LLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERG 597
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
YP F +I + + G ++EA E+ ++++ F P A+ +L+
Sbjct: 598 IYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLI 644
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + F MI + + + + + M + G +PDV Y ++++G G+
Sbjct: 278 MIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVIINGCCVGGN 337
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
M+ G P V T+N ++ LC++ V EA ++ D ++ LG PN NT
Sbjct: 338 TSVAVGWLRLMMKRGCEPSVSTFNTILHSLCREGNVVEARKLFDRVLALGVVPNTAIYNT 397
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +A D+ +A + KEM +KGV + T+ I + G + + LL ++ +
Sbjct: 398 MMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMG 457
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F+ S +D + C G +++A++L+K +A A+ +L+
Sbjct: 458 FFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLI 504
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +GF P + +I R AL + +M+ G+ PD + I++ +G+
Sbjct: 628 MLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGN 687
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F +M +GL+PD++T+N+ + G CK + A IV+ M G P++ T N
Sbjct: 688 MKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYPDITTYNI 747
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ C +++A ++ E+ G+ N TY ++ G+ + A ++ +++K
Sbjct: 748 RMHGYCSVRKMNRAIAILDELVSAGIVPNTVTYNTVMGGICSDI-LDRAMIVTAKLIKMG 806
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
F P T + ++ C++G+ AL +K+
Sbjct: 807 FIPNVITTNILLSHFCKQGMPERALLWGQKL 837
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K GF P ++ L ++ + +A +L++M + G V YT++ G D
Sbjct: 523 MVKCGFTPSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKMND 582
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ EM G+ PDV ++ I+GL K VDEA ++ M+ +G PN N+
Sbjct: 583 MDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNS 642
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G C G +++A V KEM L+G+ + T+ I++D + + A +M +
Sbjct: 643 LIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIG 702
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P TF+ ++ C+ + A +++ K+ P
Sbjct: 703 LMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYGLYP 740
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G+ V + +++ EG K E++ M+ G P T N + GLC++ K+ EA
Sbjct: 492 GLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNSLLMGLCRKGKLQEA 551
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++ M + G V L + D+ A+ + KEM +G+ ++ + ++DG
Sbjct: 552 RALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDG 611
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
L + EA + EML F P + ++++I C G + +AL++ K++ + P
Sbjct: 612 LSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLP 670
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 4/219 (1%)
Query: 8 PGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
P ++ + ++ FLVKE L+ N + G+ P+V Y ++++G+ +
Sbjct: 156 PNIVTYNSLMDGYFLVKEVNKAKQLF--NTISLRGMTPNVRSYKVMINGLCKNKMVDEAA 213
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
LF EM ++PD YN I+GLCK ++ + + M G N++T N+LL L
Sbjct: 214 NLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGL 273
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ + KA ++ ++ +G+ N++TY I++DGL + +A + +++L K + +
Sbjct: 274 CKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDA 333
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
+ +I +C++G ++EAL L+ K+ P +E
Sbjct: 334 RIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYE 372
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + FT ++ L K+ A +L M + ++P++V Y ++ G + K +L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ + + G+ P+V +Y V INGLCK VDEA + M P+ V N+L+ LC+
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+ + + EM +G N+ TY +LDGL ++ +A LL ++ + P T
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +C+ G + +A E+ + ++ K + AR + ++
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMI 340
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE- 66
P V+ + +I L K++ D + ++M I PDVV Y ++ ++ Y+K+ +
Sbjct: 37 PDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLL-NFVYIKIRKE 95
Query: 67 --------------LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK 112
L ++M + P++ T+ ++GLCK +V +A ++ MIK +
Sbjct: 96 YGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVE 155
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
PN+VT N+L+ +++KAK + + L+G+ N+ +Y++M++GL + EA+ L
Sbjct: 156 PNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANL 215
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+EM K P + ++++I +C+ I + + + ++ + + +LL
Sbjct: 216 FKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLL 270
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN------ 84
+ LN +++ +KPDVV Y ++ + + +L+ EM+ + PDV TYN
Sbjct: 25 FHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSL 84
Query: 85 ---VYIN-----GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKG 136
VYI G ++ EA+ +++ M PN+ T TL+ LC+ G++ KA+
Sbjct: 85 LNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARN 144
Query: 137 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
V+ M + VE N+ TY ++DG E+ +A L + + P ++ +I +C
Sbjct: 145 VLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLC 204
Query: 197 QKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +++EA L K++ +K+ P A+ +L+
Sbjct: 205 KNKMVDEAANLFKEMHSKNMVPDTVAYNSLI 235
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + MI L K + +A + +M + PD V Y ++ G+ +
Sbjct: 188 GMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDV 247
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EM G ++ TYN ++GLCK ++VD+AI ++ + G +PN+ T L+
Sbjct: 248 WDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDG 307
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L A+ V +++ KG +L+ Y +M++GL + + EA LL +M P
Sbjct: 308 LCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPD 367
Query: 185 SSTFD 189
T++
Sbjct: 368 GVTYE 372
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ + ++ L K + A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 254 MHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGR 313
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++ ++L G D Y V INGLCK+ +DEA+ ++ M C P+ VT
Sbjct: 314 LRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEI 373
Query: 121 LLGALCEA 128
+ AL E+
Sbjct: 374 TIRALFES 381
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 65/141 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M P + + +I L K R D + +M G +++ Y +L G+
Sbjct: 219 MHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQ 278
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K L ++ G+ P++YTY + ++GLCK ++ +A ++ ++ G + +
Sbjct: 279 VDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338
Query: 121 LLGALCEAGDLSKAKGVMKEM 141
++ LC+ G L +A ++ +M
Sbjct: 339 MINGLCKEGFLDEALSLLSKM 359
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++ L K A I + MK +PD Y+I+L G E + K E+F EM+
Sbjct: 169 FNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMV 227
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP------------------- 113
G PD+ TY + ++ LCK +VDEA+++V M C+P
Sbjct: 228 SAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIE 287
Query: 114 ----------------NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+VV N L+GA C+A L V+KEM G+ N T +++
Sbjct: 288 DAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
L+ + E +A + M+K C P + T+ +I C++ ++ AL++ K + +K F
Sbjct: 348 SSLISQGETDKAFSVFRRMIKLC-EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFV 406
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 407 PSLHTFSVLI 416
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + M+ L K R +A+ ++ +M + +P Y++++ E
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F EM G+ DV YN I CK NK+ +++ M G PN TCN ++ +
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSS 349
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L G+ KA V + M +K E + TY +++ + E+ A + + M K F P
Sbjct: 350 LISQGETDKAFSVFRRM-IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPS 408
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW---EALLLHSGSD 233
TF +I +C KG +A L+++++ K P + LL+ G D
Sbjct: 409 LHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 23 EERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
E GM A KQ + Y +++ + Y + EL + M G++ +V
Sbjct: 74 ENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAKIRQYQIMWELVNSMRKKGMV-NVE 132
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+ + + + +KVDEA+ + M K N+ N LL ALC++ ++ KA+ + M
Sbjct: 133 TFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 192
Query: 142 GLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
KG E + TY I+L+G + + +A + EM+ P T+ ++ +C+ G
Sbjct: 193 --KGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGR 250
Query: 201 INEALELMKKIVAKSFAPGARAWEALLLHS 230
++EA+E++K++ P + + ++L+H+
Sbjct: 251 VDEAVEVVKEMDDNDCRPTSFIY-SVLVHT 279
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++ L K A I + MK +PD Y+I+L G E + K E+F EM+
Sbjct: 169 FNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMV 227
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP------------------- 113
G PD+ TY + ++ LCK +VDEA+++V M C+P
Sbjct: 228 SAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIE 287
Query: 114 ----------------NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+VV N L+GA C+A L V+KEM G+ N T +++
Sbjct: 288 DAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
L+ + E +A + M+K C P + T+ +I C++ ++ AL++ K + +K F
Sbjct: 348 SSLISQGETDKAFSVFRRMIKLC-EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFV 406
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 407 PSLHTFSVLI 416
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + M+ L K R +A+ ++ +M + +P Y++++ E
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F EM G+ DV YN I CK NK+ +++ M G PN TCN ++ +
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSS 349
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L G+ KA V + M +K E + TY +++ + E+ A + + M K F P
Sbjct: 350 LISQGETDKAFSVFRRM-IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPS 408
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW---EALLLHSGSD 233
TF +I +C KG +A L+++++ K P + LL+ G D
Sbjct: 409 LHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 23 EERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
E GM A KQ + Y +++ + Y + EL + M G++ +V
Sbjct: 74 ENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAKIRQYQIMWELVNSMRKKGMV-NVE 132
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+ + + + +KVDEA+ + M K N+ N LL ALC++ ++ KA+ + M
Sbjct: 133 TFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 192
Query: 142 GLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
KG E + TY I+L+G + + +A + EM+ P T+ ++ +C+ G
Sbjct: 193 --KGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGR 250
Query: 201 INEALELMKKIVAKSFAPGARAWEALLLHS 230
++EA+E++K++ P + + ++L+H+
Sbjct: 251 VDEAVEVVKEMDDNDCRPTSFIY-SVLVHT 279
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++ L K A I + MK +PD Y+I+L G E + K E+F EM+
Sbjct: 169 FNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMV 227
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP------------------- 113
G PD+ TY + ++ LCK +VDEA+++V M C+P
Sbjct: 228 SAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIE 287
Query: 114 ----------------NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+VV N L+GA C+A L V+KEM G+ N T +++
Sbjct: 288 DAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
L+ + E +A + M+K C P + T+ +I C++ ++ AL++ K + +K F
Sbjct: 348 SSLISQGETDKAFSVFRRMIKLC-EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFV 406
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 407 PSLHTFSVLI 416
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + M+ L K R +A+ ++ +M + +P Y++++ E
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F EM G+ DV YN I CK NK+ +++ M G PN TCN ++ +
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSS 349
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L G+ KA V + M +K E + TY +++ + E+ A + + M K F P
Sbjct: 350 LISQGETDKAFSVFRRM-IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPS 408
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW---EALLLHSGSD 233
TF +I +C KG +A L+++++ K P + LL+ G D
Sbjct: 409 LHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 23 EERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
E GM A KQ + Y +++ + Y + EL + M G++ +V
Sbjct: 74 ENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAKIRQYQIMWELVNSMRKKGMV-NVE 132
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+ + + + +KVDEA+ + M K N+ N LL ALC++ ++ KA+ + M
Sbjct: 133 TFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 192
Query: 142 GLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
KG E + TY I+L+G + + +A + EM+ P T+ ++ +C+ G
Sbjct: 193 --KGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGR 250
Query: 201 INEALELMKKIVAKSFAPGARAWEALLLHS 230
++EA+E++K++ P + + ++L+H+
Sbjct: 251 VDEAVEVVKEMDDNDCRPTSFIY-SVLVHT 279
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 37/250 (14%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F ++ L K A I + MK +PD Y+I+L G E + K E+F EM+
Sbjct: 169 FNGLLSALCKSRNVRKAQEIFDSMK-GRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMV 227
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP------------------- 113
G PD+ TY + ++ LCK +VDEA+++V M C+P
Sbjct: 228 SAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIE 287
Query: 114 ----------------NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+VV N L+GA C+A L V+KEM G+ N T +++
Sbjct: 288 DAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIM 347
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
L+ + E +A + M+K C P + T+ +I C++ ++ AL++ K + +K F
Sbjct: 348 SSLISQGETDKAFSVFRRMIKLC-EPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFV 406
Query: 218 PGARAWEALL 227
P + L+
Sbjct: 407 PSLHTFSVLI 416
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ + M+ L K R +A+ ++ +M + +P Y++++ E
Sbjct: 230 GCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDA 289
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F EM G+ DV YN I CK NK+ +++ M G PN TCN ++ +
Sbjct: 290 IDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSS 349
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L G+ KA V + M +K E + TY +++ + E+ A + + M K F P
Sbjct: 350 LISQGETDKAFSVFRRM-IKLCEPDADTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPS 408
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW---EALLLHSGSD 233
TF +I +C KG +A L+++++ K P + LL+ G D
Sbjct: 409 LHTFSVLINGLCAKGNAMKACILLEEMIEKGIRPSRITFGKLRQLLIKEGRD 460
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 23 EERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
E GM A KQ + Y +++ + Y + EL + M G++ +V
Sbjct: 74 ENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAKIRQYQIMWELVNSMRKKGMV-NVE 132
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
T+ + + + +KVDEA+ + M K N+ N LL ALC++ ++ KA+ + M
Sbjct: 133 TFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSM 192
Query: 142 GLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
KG E + TY I+L+G + + +A + EM+ P T+ ++ +C+ G
Sbjct: 193 --KGRFEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGR 250
Query: 201 INEALELMKKIVAKSFAPGARAWEALLLHS 230
++EA+E++K++ P + + ++L+H+
Sbjct: 251 VDEAVEVVKEMDDNDCRPTSFIY-SVLVHT 279
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 108/197 (54%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I + M G+ +V YT +++G+ + LF+EM +IP+V TYN I+GL
Sbjct: 337 IFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLG 396
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K K+ +++VD M G PN++T N++L ALC+ + KA ++ + +G+ +++
Sbjct: 397 KLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMY 456
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
TY +++ GL ++ +A + E++L K + T+ +I C KGL + AL L+ K+
Sbjct: 457 TYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKM 516
Query: 212 VAKSFAPGARAWEALLL 228
P A+ +E ++L
Sbjct: 517 EDNGCIPNAKTYEIVIL 533
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 116/214 (54%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V +T MI L K + +A+ + +M+ I P+VV Y ++ G+ G
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L DEM G P++ TYN ++ LCK + VD+AI ++ ++ G +P++ T
Sbjct: 401 ISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTV 460
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC++G L A+ V +++ +KG L+++TY +M+ G K A LL +M
Sbjct: 461 LIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNG 520
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T++ +I + +K + A +L+++++A+
Sbjct: 521 CIPNAKTYEIVILSLFEKDENDMAEKLLREMIAR 554
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 108/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F ++ LVK + AL + QM+ +GI D + I+++ G +
Sbjct: 68 PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ++L G P+ T+N I GLC + + +A+ D ++ G + V+ TL+ LC+
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G ++ A ++K + K V+ N Y +++D + + +A L +M+ K P T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++I C G + EA+ L+ K++ ++ P + L+
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILV 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 109/220 (49%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I + K + DA + +QM I PD ++ G G + L
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGL 267
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M++ + P +YT+++ ++ CK+ KV EA ++ +K +VVT N+L+ C
Sbjct: 268 LHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCL 327
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++KAK + M +GV N+ +Y M++GL + EA L EEM + P T
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVT 387
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++++I + + G I+ L+L+ ++ + P + ++L
Sbjct: 388 YNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K A+ +L +K GI+PD+ YT+++ G+ G
Sbjct: 411 MHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGK 470
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+++LV G DVYTY V I G C + D A+ ++ M GC PN T
Sbjct: 471 LEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEI 530
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM +G+
Sbjct: 531 VILSLFEKDENDMAEKLLREMIARGL 556
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 101/200 (50%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ +L++M + I P + ++I++ EG + + + +I DV TYN +
Sbjct: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G C ++++A I DSM G NV + T++ LC+ + +A + +EM + +
Sbjct: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ TY ++DGL +I L++EM + P T+++I+ +C+ +++A+ L
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ + + P + L+
Sbjct: 443 LTNLKDQGIRPDMYTYTVLI 462
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 103/234 (44%), Gaps = 35/234 (14%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
+ + ++ + G P+ + + ++ G+ +G + D+++ G D +Y IN
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183
Query: 89 GLCKQNKVDEAIQ-------------------IVDSMIKLG----------------CKP 113
GLCK ++ A+Q I+D+M K P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
+ TCN+L+ C G L +A G++ +M L+ + ++T+ I++D + ++ EA ++L
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303
Query: 174 EEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+KK T+++++ C IN+A ++ + ++ +++ ++
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMI 357
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 106/196 (54%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ ++K G+ PDV Y+I++ G+V G + +LF EM GL DV YN I+G C
Sbjct: 574 LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K KVD+A Q+++ M G +P VVT +++ L + L +A + +E GV+LN+
Sbjct: 634 KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVV 693
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y ++DG I EA L+LEE+++K P S T++ ++ + + I+EA + +
Sbjct: 694 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753
Query: 212 VAKSFAPGARAWEALL 227
+P A + ++
Sbjct: 754 KNLKCSPNAMTYSIMI 769
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G P V ++ +I LVK + + +MK+ G+ DV+ Y V+ G G
Sbjct: 578 IKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGK 637
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +L +EM GL P V TY ++GL K +++DEA + + +G NVV ++
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G + +A +++E+ KG+ N +T+ +LD LV EI EA + + M
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ +I +C N+A +++ + P + ++
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +I+ K R D I +M G PD++ + + G+ K L
Sbjct: 515 PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRAL 574
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+E+ GL+PDV +Y++ I+GL K E ++ M + G +V+ NT++ C+
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCK 634
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G + KA +++EM KG++ + TY ++DGL + EA +L EE
Sbjct: 635 SGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I + G I+EA ++++++ K P + W LL
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLL 734
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 118/230 (51%), Gaps = 6/230 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G V+ + +I K + A +L +MK G++P VV Y V+ G+ A+ D
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGL-AKID 671
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+LDE LF+E +G+ +V Y+ I+G K ++DEA I++ +++ G PN T
Sbjct: 672 --RLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N LL AL +A ++ +A+ + M N TY IM++GL + +A + +EM
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQ 789
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K+ P + T+ +I + + G + EA L + A P + + A++
Sbjct: 790 KQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMI 839
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRK F P +T +I L R L + +QM++ G + +V +T ++ EG
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L DEM D+ YNV I+ K KVD A + M G P+ VT T
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+G LC+A L +A + +E+ L ++ Y M+ G + EA LLE +K
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ I+ C+ +KG + EAL + ++ + AP + L+
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILI 419
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 105/218 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P +M MI L K ++ +A I + PD + ++ G+ G
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGR 497
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L+++ML IP+V Y I K + ++ +I M+ GC P+++ N+
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ + +AG++ K + + +E+ +G+ ++ +Y I++ GLV E L EM ++
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ ++ +I C+ G +++A +L++++ K P
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQP 655
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + MI + +A +L + K+ G P V+ Y +L+ + +G + +
Sbjct: 341 PCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRI 400
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P++ TYN+ I+ LCK +++ A+++ D+M + G PN++T N ++ LC+
Sbjct: 401 HDEMR-QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCK 459
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
A L +A + + K + T+ ++DGL + + +A L E+ML P
Sbjct: 460 AQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVV 519
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTY 236
+ ++I + G + ++ K++V + +P + +LL+S D +
Sbjct: 520 YTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP-----DLMLLNSYMDCVF 563
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
+ +G V+ ++ +I K R +A IL ++ Q G+ P+ + +L +V +
Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEI 743
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ F M L P+ TY++ INGLC K ++A M K G KPN +T T+
Sbjct: 744 DEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTM 803
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKC 180
+ L +AG++ +A+G+ G + Y M++GL + +A ++ EE LK C
Sbjct: 804 IAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGC 863
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ L P M ++ MI L + A +M++ G+KP+ + YT +++G+ G+
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ LFD G +PD YN I GL NK +A + + GC+ N TC
Sbjct: 813 VMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVV 872
Query: 121 LLGALCEAGDLSKAK---GVMKEMG 142
LL AL +A L +A V++EM
Sbjct: 873 LLDALHKADCLEQAAIVGAVLREMA 897
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ LVK E +A MK P+ + Y+I+++G+ + K
Sbjct: 722 GLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKA 781
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ EM GL P+ TY I GL K V EA + D G P+ N ++
Sbjct: 782 FVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEG 841
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L A A V +E LKG +N T ++LD L KA+ E + ++ +L++ +
Sbjct: 842 LSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL-HKADCLEQAAIVGAVLREMAKSQ 900
Query: 185 SST 187
+T
Sbjct: 901 HAT 903
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 13/233 (5%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS--GIVAEGD 60
K GF P ++ T +I+ E R AL +L +++ + DVV YT ++ +A
Sbjct: 132 KFGFQPNIVTLTTLIK---GETRA--ALQMLRKIEGKLVNTDVVMYTAIIDMLSFMAFAW 186
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
V + LF EM++ ++P+VYT N+ ++ LCK+ V +A ++ M+K G P+VVT
Sbjct: 187 LVNSKQAFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVT 246
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+L+ C ++KAK V +G + ++ ++H+Y I+++GL + EA L +EM
Sbjct: 247 YTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEM- 305
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHS 230
C P T+ ++I +C+ G ++ A EL+ K+ P LLH+
Sbjct: 306 -HC-EPNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLLHA 356
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V +T +I L K + +AL + +M +P++V Y+ ++ G+ G EL
Sbjct: 277 PDVHSYTIIINGLCKIKMVDEALNLFKEMH---CEPNMVTYSSLIDGLCKSGRVSHAWEL 333
Query: 68 FDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
D+M G ++ TYN ++ LCK + VD+AI +V + G +PN+ T N L+ LC
Sbjct: 334 LDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLC 393
Query: 127 EAGDLSKAKGVMKE-------MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ G L A+G+ E M G + TY ++ L E +A LL EM+ +
Sbjct: 394 KEGRLRNAQGLFDEAVTLLSKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREMIAR 453
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKP-DVVCYTIVLSGIVAEGDYVKLDE 66
P ++ ++ +I L K R A +L++M D +P +++ Y +L + K
Sbjct: 309 PNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIA 368
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKV-------DEAIQIVDSMIKLGCKPNVVTCN 119
L ++ G+ P++ TYN+ I+GLCK+ ++ DEA+ ++ M GC P+ VT
Sbjct: 369 LVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEAVTLLSKMEDNGCIPDAVTYE 428
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV 146
T++ AL + + KA+ +++EM +G+
Sbjct: 429 TIIRALFKNDENDKAEKLLREMIARGL 455
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 18 RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD--YVKLDELFDEMLVLG 75
+F++ +A+ N M P ++ + +L +V + Y LF+++ +
Sbjct: 40 QFVISTVDVDNAVSSFNHMLCVNPPPPIIEFNKILGSLVKSKNNHYPTAISLFNQLELNR 99
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG------ 129
+ PD+ T+N+ IN C +++ A ++ ++K G +PN+VT TL+ A
Sbjct: 100 VTPDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGETRAALQMLRK 159
Query: 130 -----------------------------DLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+ +A G+ EM L + N++T I++D L
Sbjct: 160 IEGKLVNTDVVMYTAIIDMLSFMAFAWLVNSKQAFGLFHEMVLTNILPNVYTSNILVDAL 219
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ + +A ++ M+K+ P T+ +++ C +N+A + + + P
Sbjct: 220 CKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRKIKPDV 279
Query: 221 RAWEALL 227
++ ++
Sbjct: 280 HSYTIII 286
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I ++ + ++A + N M + G +PD+V + ++SG G+ ++ +L
Sbjct: 265 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 324
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD + G++PDV++Y + I G CK ++DEA+ + + M ++V ++L+ LC+
Sbjct: 325 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 384
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A + + G N+ TY I++D +I L + M K P T
Sbjct: 385 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 444
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ I EA+ L+ + +K+ AP + + +L
Sbjct: 445 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLF 484
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I K+E A + ++ GI PD++ YT ++ G G + ++ +L
Sbjct: 195 PNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQL 254
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM+ + P+VYT+NV I+ C++ K+ EA + + M+K G +P++VT NTL+ C
Sbjct: 255 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 314
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G++ +A+ + + +G+ ++ +Y I++ G I EA L EM K
Sbjct: 315 HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 374
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I+ A EL I P + L+
Sbjct: 375 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 414
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I L K R +DA +L +M+ +KP++V Y +++ + K +L+ +++
Sbjct: 165 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 224
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+G+ PD+ TY I G C+ + E Q++ M+ PNV T N L+ A C G +
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A+G+ M +G + ++ T+ ++ G + EA L + + ++ P ++ +I
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 344
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFN 246
C+ I+EA+ L ++ K+ + +L+ L ++Y+ F+ + N
Sbjct: 345 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINN 400
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G+ P + T +++ L A+ + + G+ D VCY +++G+ G +
Sbjct: 120 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 179
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L EM + P++ YN+ I+ CK +A + ++ +G P+++T +L+
Sbjct: 180 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 239
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G + K +M EM K + N++T+ +++D K ++ EA + M+K+
Sbjct: 240 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 299
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P TF+ +I C G + EA +L + + P ++ L++
Sbjct: 300 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 345
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P ++ +T +IR + + + ++ +M I P+V + +++ +G ++
Sbjct: 226 MGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIE 285
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+F+ M+ G PD+ T+N I+G C V EA ++ D++ + G P+V + L+
Sbjct: 286 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 345
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ + +A + EM K + L++ Y ++DGL I A L + P
Sbjct: 346 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 405
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C+ I+ +EL K + K P + L+
Sbjct: 406 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 449
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I L K R A + + + DG P+V+ Y I++ D ELF M
Sbjct: 375 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 434
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
GL P V TYN+ ING CK ++ EA+ ++ M P+ +T N+L LC++G +S
Sbjct: 435 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 494
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
A + K M + G +++ TY ++LD ++
Sbjct: 495 DAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 529
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L + + G +P+ + T V+ G+ G+ K + D + G++ D Y IN
Sbjct: 111 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLIN 170
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + +A Q++ M KPN+V N ++ + C+ KA+ + ++ G++
Sbjct: 171 GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDP 230
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G + GE L+ EM+ K P TF+ +I C+KG + EA +
Sbjct: 231 DILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMF 290
Query: 209 KKIVAKSFAPGARAWEALL 227
+V + P + L+
Sbjct: 291 NLMVKRGQQPDIVTFNTLI 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V +T +I K +R +A+ + N+M+ + D+V Y+ ++ G+ G
Sbjct: 332 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 391
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
ELF + G P+V TYN+ I+ CK +D I++ M G P V+T N L+
Sbjct: 392 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 451
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
C++ + +A ++ M K + + TY + DGL I +A L + M
Sbjct: 452 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 503
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N + P V+ + ++ +V L +M+ G+ P ++T +++I
Sbjct: 40 DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 99
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C ++ A ++ ++K G +PN +T T++ LC G++ KA + +G+
Sbjct: 100 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 159
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L+ Y +++GL +A LL+EM + P ++ II C+ L +A +L
Sbjct: 160 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 219
Query: 208 MKKIVAKSFAPGARAWEALL 227
KIV P + +L+
Sbjct: 220 YLKIVDMGIDPDILTYTSLI 239
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%)
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
N +D+A+ + + +I + P+V+ NT++G++ + A ++K+M KGV ++ T
Sbjct: 36 NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 95
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
I ++ E+G A +L +LK+ + P + T ++ +C G + +A++ + A
Sbjct: 96 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 155
Query: 214 K 214
+
Sbjct: 156 Q 156
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K + + + M G+ P V+ Y I+++G + L
Sbjct: 405 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 464
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M L PD TYN +GLCK ++ +A ++ M G +V T N LL A C+
Sbjct: 465 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 524
Query: 128 AGDLS 132
A D++
Sbjct: 525 AQDVA 529
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I K +R +A+ +L+ M+ + PD + Y + G+ G
Sbjct: 437 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 496
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
ELF M V G DV TYNV ++ CK V
Sbjct: 497 WELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 528
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I ++ + ++A + N M + G +PD+V + ++SG G+ ++ +L
Sbjct: 265 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 324
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD + G++PDV++Y + I G CK ++DEA+ + + M ++V ++L+ LC+
Sbjct: 325 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 384
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A + + G N+ TY I++D +I L + M K P T
Sbjct: 385 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 444
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ I EA+ L+ + +K+ AP + + +L
Sbjct: 445 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLF 484
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I K+E A + ++ GI PD++ YT ++ G G + ++ +L
Sbjct: 195 PNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQL 254
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM+ + P+VYT+NV I+ C++ K+ EA + + M+K G +P++VT NTL+ C
Sbjct: 255 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 314
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G++ +A+ + + +G+ ++ +Y I++ G I EA L EM K
Sbjct: 315 HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 374
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I+ A EL I P + L+
Sbjct: 375 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 414
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I L K R +DA +L +M+ +KP++V Y +++ + K +L+ +++
Sbjct: 165 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 224
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+G+ PD+ TY I G C+ + E Q++ M+ PNV T N L+ A C G +
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A+G+ M +G + ++ T+ ++ G + EA L + + ++ P ++ +I
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 344
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFN 246
C+ I+EA+ L ++ K+ + +L+ L ++Y+ F+ + N
Sbjct: 345 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINN 400
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G+ P + T +++ L A+ + + G+ D VCY +++G+ G +
Sbjct: 120 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 179
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L EM + P++ YN+ I+ CK +A + ++ +G P+++T +L+
Sbjct: 180 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 239
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G + K +M EM K + N++T+ +++D K ++ EA + M+K+
Sbjct: 240 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 299
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P TF+ +I C G + EA +L + + P ++ L++
Sbjct: 300 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 345
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P ++ +T +IR + + + ++ +M I P+V + +++ +G ++
Sbjct: 226 MGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIE 285
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+F+ M+ G PD+ T+N I+G C V EA ++ D++ + G P+V + L+
Sbjct: 286 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 345
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ + +A + EM K + L++ Y ++DGL I A L + P
Sbjct: 346 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 405
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C+ I+ +EL K + K P + L+
Sbjct: 406 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 449
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I L K R A + + + DG P+V+ Y I++ D ELF M
Sbjct: 375 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 434
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
GL P V TYN+ ING CK ++ EA+ ++ M P+ +T N+L LC++G +S
Sbjct: 435 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 494
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
A + K M + G +++ TY ++LD ++
Sbjct: 495 DAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 529
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L + + G +P+ + T V+ G+ G+ K + D + G++ D Y IN
Sbjct: 111 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLIN 170
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + +A Q++ M KPN+V N ++ + C+ KA+ + ++ G++
Sbjct: 171 GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDP 230
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G + GE L+ EM+ K P TF+ +I C+KG + EA +
Sbjct: 231 DILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMF 290
Query: 209 KKIVAKSFAPGARAWEALL 227
+V + P + L+
Sbjct: 291 NLMVKRGQQPDIVTFNTLI 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V +T +I K +R +A+ + N+M+ + D+V Y+ ++ G+ G
Sbjct: 332 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 391
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
ELF + G P+V TYN+ I+ CK +D I++ M G P V+T N L+
Sbjct: 392 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 451
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
C++ + +A ++ M K + + TY + DGL I +A L + M
Sbjct: 452 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 503
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N + P V+ + ++ +V L +M+ G+ P ++T +++I
Sbjct: 40 DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 99
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
N C ++ A ++ ++K G +PN +T T++ LC G++ KA + +G+
Sbjct: 100 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 159
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L+ Y +++GL +A LL+EM + P ++ II C+ L +A +L
Sbjct: 160 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 219
Query: 208 MKKIVAKSFAPGARAWEALL 227
KIV P + +L+
Sbjct: 220 YLKIVDMGIDPDILTYTSLI 239
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%)
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
N +D+A+ + + +I + P+V+ NT++G++ + A ++K+M KGV ++ T
Sbjct: 36 NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 95
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
I ++ E+G A +L +LK+ + P + T ++ +C G + +A++ + A
Sbjct: 96 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 155
Query: 214 K 214
+
Sbjct: 156 Q 156
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K + + + M G+ P V+ Y I+++G + L
Sbjct: 405 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 464
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M L PD TYN +GLCK ++ +A ++ M G +V T N LL A C+
Sbjct: 465 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 524
Query: 128 AGDLS 132
A D++
Sbjct: 525 AQDVA 529
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I K +R +A+ +L+ M+ + PD + Y + G+ G
Sbjct: 437 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 496
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
ELF M V G DV TYNV ++ CK V
Sbjct: 497 WELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 528
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GF P V ++ LVK+ R +D + +M + + P+V + I+L+ + G +
Sbjct: 139 GFSPSVFTCNMVLGSLVKD-REVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKS 197
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L +M G P TYN +N CK+ + A +++D+M G +V T N L+
Sbjct: 198 AGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLID 257
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LC +K +++ M V N TY +++GLV + +IG A+ + EEM P
Sbjct: 258 DLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLP 317
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
S T++ +I C G I EAL L +V+ P + ALL
Sbjct: 318 NSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALL 361
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V + +I L ++ R IL +M+++ + P+ + Y +++G+V EG
Sbjct: 240 MASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGK 299
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F+EM + L+P+ TYN I G C ++EA+++ D M+ G +PN VT
Sbjct: 300 IGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGA 359
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL + + V++ M + GV + +Y M+DGL + EA LL++MLK
Sbjct: 360 LLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVS 419
Query: 181 FYPRSSTFDNIICCMCQKG 199
P TF ++ + G
Sbjct: 420 VSPDIVTFSVLVNGFLKAG 438
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 1 MRKLGFC---PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M FC P V D +IR ++E DA+ M G P V +VL +V
Sbjct: 99 METYPFCNSNPAVFDL--LIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVK 156
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ + F EM+ + P+V T+N+ +N LC++ K A ++ M + G P VT
Sbjct: 157 DREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVT 216
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTLL C+ G A ++ M KG+ ++ TY +++D L K+ + L+L M
Sbjct: 217 YNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMR 276
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
K YP T++ +I + ++G I A ++ +++ + P + + L+
Sbjct: 277 KNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIF 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE- 66
P +T ++ L+KE ALY+ M +G++PD + + ++L +G K+++
Sbjct: 655 PNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDI 714
Query: 67 ----------------------------------LFDEMLVLGLIPDVYTYNVYINGLCK 92
L++EM++ G PD T++ I G CK
Sbjct: 715 LSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCK 774
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
+D A++ + + G K + T N L+ LCE ++ A ++K++ + GV N+ T
Sbjct: 775 SGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDT 834
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y + +G V EA +L +L+ + P F +I MC+ G + A+EL ++
Sbjct: 835 YNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEM 893
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + ++ + K+ R A +++ M GI DV Y +++ + +
Sbjct: 205 MDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSR 264
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + M + P+ TYN INGL K+ K+ A ++ + M PN VT NT
Sbjct: 265 SAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNT 324
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G++ +A + M G+ N TY +L+G+ A+ G S +LE M
Sbjct: 325 LIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDG 384
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I +C+ GL+ EA++L+ ++ S +P + L+
Sbjct: 385 VRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLV 431
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+ + G + M+ + +A+ +L++M + PD YT +++G+ +G V
Sbjct: 580 IPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVP 639
Query: 64 LDELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
L + GL+ P+ Y ++GL K+ A+ + + M+ G +P+ + N LL
Sbjct: 640 ALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLL 699
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
G +SK ++ M + + NL TY I+L G + + S L EM+ F
Sbjct: 700 DRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFA 759
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P T+ ++I C+ G ++ A++ ++KI + F
Sbjct: 760 PDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGF 793
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 1/212 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LG P V + + V+ +A IL+ + ++G P +T ++ G+ G+
Sbjct: 826 LGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKG 885
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL DEM +LG+ + I GL + K DEA +I+ M+++ P V T TL+
Sbjct: 886 AMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMH 945
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ G+++KA + M V+L++ Y +++ GL +I A L EEM ++ +P
Sbjct: 946 TYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWP 1005
Query: 184 RSSTFDNII-CCMCQKGLINEALELMKKIVAK 214
+S + +I +C I E+ +L++ + +
Sbjct: 1006 NTSIYIVLIDSFLCTGNYIVESEKLLRDLRTR 1037
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTI-VLSGIVAEGDYVK 63
GF P + + +I K A+ L ++ +G K D C+T+ VL + E + +K
Sbjct: 757 GFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVD--CFTLNVLVSKLCERNEIK 814
Query: 64 LD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +L ++ +LG+ P+V TYN NG + DEA I+ ++++ G P TL+
Sbjct: 815 MAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLI 874
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
+C G++ A + EM + GV ++ GL + EA+ +L ML+
Sbjct: 875 RGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQII 934
Query: 183 PRSSTFDNIICCMCQKGLINEALEL 207
P +TF ++ C++G + +ALEL
Sbjct: 935 PTVATFTTLMHTYCKEGNVAKALEL 959
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 22/249 (8%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG- 59
MR G G + +T MI L K +A+ +L+ M + + PD+V ++++++G + G
Sbjct: 380 MRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGK 439
Query: 60 ---------------DYVKLDEL------FDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
+Y K+ L + M G + D +T +V + C+ +++E
Sbjct: 440 TGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEE 499
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A VD M ++G P+ VT + ++ +GD KA V +M G + TY +L
Sbjct: 500 AEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLK 559
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
GL+ I EA + + + S+ ++ ++ + G ++ A+ L+ ++V +F P
Sbjct: 560 GLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVP 619
Query: 219 GARAWEALL 227
+ + +L+
Sbjct: 620 DSFTYTSLI 628
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + + M G++P+ V Y +L+GI + + + + M + G+ +Y I
Sbjct: 337 EALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMI 396
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVT----------------------CNTLLGAL 125
+GLCK ++EA+Q++D M+K+ P++VT +TL+
Sbjct: 397 DGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHSTLIYNY 456
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G+L +A M G + T +++ + EA ++ M + P S
Sbjct: 457 CKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSS 516
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
TFD II G +A + K+ + P +E
Sbjct: 517 VTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYE 555
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 114/220 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I ++ + ++A + N M + G +PD+V + ++SG G+ ++ +L
Sbjct: 249 PNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKL 308
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD + G++PDV++Y + I G CK ++DEA+ + + M ++V ++L+ LC+
Sbjct: 309 FDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 368
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A + + G N+ TY I++D +I L + M K P T
Sbjct: 369 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 428
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C+ I EA+ L+ + +K+ AP + + +L
Sbjct: 429 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLF 468
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I K+E A + ++ GI PD++ YT ++ G G + ++ +L
Sbjct: 179 PNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQL 238
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM+ + P+VYT+NV I+ C++ K+ EA + + M+K G +P++VT NTL+ C
Sbjct: 239 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 298
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G++ +A+ + + +G+ ++ +Y I++ G I EA L EM K
Sbjct: 299 HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 358
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I +C+ G I+ A EL I P + L+
Sbjct: 359 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 398
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ +I L K R +DA +L +M+ +KP++V Y +++ + K +L+ +++
Sbjct: 149 YGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIV 208
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+G+ PD+ TY I G C+ + E Q++ M+ PNV T N L+ A C G +
Sbjct: 209 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 268
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A+G+ M +G + ++ T+ ++ G + EA L + + ++ P ++ +I
Sbjct: 269 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 328
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLFN 246
C+ I+EA+ L ++ K+ + +L+ L ++Y+ F+ + N
Sbjct: 329 IGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINN 384
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G+ P + T +++ L A+ + + G+ D VCY +++G+ G +
Sbjct: 104 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 163
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+L EM + P++ YN+ I+ CK +A + ++ +G P+++T +L+
Sbjct: 164 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 223
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G + K +M EM K + N++T+ +++D K ++ EA + M+K+
Sbjct: 224 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 283
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P TF+ +I C G + EA +L + + P ++ L++
Sbjct: 284 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 329
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P ++ +T +IR + + + ++ +M I P+V + +++ +G ++
Sbjct: 210 MGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIE 269
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+F+ M+ G PD+ T+N I+G C V EA ++ D++ + G P+V + L+
Sbjct: 270 AQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 329
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+ + +A + EM K + L++ Y ++DGL I A L + P
Sbjct: 330 GYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 389
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C+ I+ +EL K + K P + L+
Sbjct: 390 NVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 433
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I L K R A + + + DG P+V+ Y I++ D ELF M
Sbjct: 359 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 418
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
GL P V TYN+ ING CK ++ EA+ ++ M P+ +T N+L LC++G +S
Sbjct: 419 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 478
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG 167
A + K M + G +++ TY ++LD ++
Sbjct: 479 DAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 513
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +L + + G +P+ + T V+ G+ G+ K + D + G++ D Y IN
Sbjct: 95 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLIN 154
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK + +A Q++ M KPN+V N ++ + C+ KA+ + ++ G++
Sbjct: 155 GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDP 214
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
++ TY ++ G + GE L+ EM+ K P TF+ +I C+KG + EA +
Sbjct: 215 DILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMF 274
Query: 209 KKIVAKSFAPGARAWEALL 227
+V + P + L+
Sbjct: 275 NLMVKRGQQPDIVTFNTLI 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V +T +I K +R +A+ + N+M+ + D+V Y+ ++ G+ G
Sbjct: 316 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 375
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
ELF + G P+V TYN+ I+ CK +D I++ M G P V+T N L+
Sbjct: 376 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 435
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
C++ + +A ++ M K + + TY + DGL I +A L + M
Sbjct: 436 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 487
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 11 MDFTDMIRFLVKEERGMDALYILNQMKQDGIK------PDVVCYTIVLSGIVAEGDYVKL 64
M+ + L G D +Y N + + P V+ + ++ +V
Sbjct: 1 MELSKKCNLLQARGEGCDVVYCYNNKVKVCLPQISEPLPSVIQFNTIIGSVVKMKHCPVA 60
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M+ G+ P ++T +++IN C ++ A ++ ++K G +PN +T T++
Sbjct: 61 ISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKG 120
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G++ KA + +G+ L+ Y +++GL +A LL+EM + P
Sbjct: 121 LCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 180
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ II C+ L +A +L KIV P + +L+
Sbjct: 181 IVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 223
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K + + + M G+ P V+ Y I+++G + L
Sbjct: 389 PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNL 448
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M L PD TYN +GLCK ++ +A ++ M G +V T N LL A C+
Sbjct: 449 LSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 508
Query: 128 AGDLS 132
A D++
Sbjct: 509 AQDVA 513
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I K +R +A+ +L+ M+ + PD + Y + G+ G
Sbjct: 421 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 480
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
ELF M V G DV TYNV ++ CK V
Sbjct: 481 WELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 512
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V F MI+ + M + +L M++ G+ P+VV YT ++ G GD +LF
Sbjct: 164 VYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGCCKNGDVHLAKKLFC 223
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M L L+ + +TY+V ING KQ E Q+ +SM G PNV T ++++G C G
Sbjct: 224 KMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSSVIGEYCNDG 283
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ KA V EM K + ++ TY ++++GL ++GEA L + + P T++
Sbjct: 284 SIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYN 343
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C I+ A+ L ++ + +P + L+
Sbjct: 344 TLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLI 381
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ G P V+ + +I K AL ++ +M++ I P V YTI+L+G V
Sbjct: 365 LKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFVRINY 424
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ M GL+ DVYTY V I+GLC + EA ++ S+ +L +PN V +T
Sbjct: 425 MEKAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDT 484
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+ G+ +A ++ EM KG+ N+ ++ + L ++ EA ++L+ M+
Sbjct: 485 LIHGYCKEGNCYRALRLLNEMIGKGMVPNVASFCSTIGLLCKDEKLKEAEVVLQHMVNLG 544
Query: 181 FYPRSSTFD 189
P S ++
Sbjct: 545 LKPSVSLYN 553
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ ++G P + + +I+ E+ A+ + N++K +G+ P VV Y +++G G+
Sbjct: 330 VNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGN 389
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L EM + P TY + +NG + N +++A +I M K G +V T
Sbjct: 390 LAGALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGV 449
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G + +A + K + +E N Y ++ G + A LL EM+ K
Sbjct: 450 LIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCYRALRLLNEMIGKG 509
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
P ++F + I +C+ + EA +++ +V P +
Sbjct: 510 MVPNVASFCSTIGLLCKDEKLKEAEVVLQHMVNLGLKPSVSLY 552
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ +T +I K A + +MK + + Y+++++G +G
Sbjct: 190 MEKTGLSPNVVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGL 249
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++++ M + G++P+VYTY+ I C +D+A + D M + +++T N
Sbjct: 250 QKEGFQMYESMKLSGIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNL 309
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC L +A + + G+ N+ TY ++ G +I A L E+
Sbjct: 310 LINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNG 369
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++ +I + G + AL L+K++ ++ AP + +LL+ + Y E
Sbjct: 370 LSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTY-TILLNGFVRINYMEKA 428
Query: 241 F 241
F
Sbjct: 429 F 429
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ L ++ +I K+ + + MK GI P+V Y+ V+ +G
Sbjct: 225 MKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSSVIGEYCNDGS 284
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +FDEM + + TYN+ INGLC+ K+ EA+++ + ++G +PN+ T NT
Sbjct: 285 IDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNT 344
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C+A + A + E+ G+ + TY ++ G + A L++EM ++
Sbjct: 345 LIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERN 404
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P T+ ++ + + +A E+
Sbjct: 405 IAPTKVTYTILLNGFVRINYMEKAFEI 431
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 6/226 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ +M + +I L + ++ +A+ + ++ + G++P++ Y ++ G D
Sbjct: 295 MREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYC---D 351
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K+D L++E+ GL P V TYN I G K + A+ +V M + P VT
Sbjct: 352 AEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVT 411
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
LL + KA + M G+ +++TY +++ GL + EAS L + +
Sbjct: 412 YTILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLD 471
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
+ P S +D +I C++G AL L+ +++ K P ++
Sbjct: 472 ELNMEPNSVIYDTLIHGYCKEGNCYRALRLLNEMIGKGMVPNVASF 517
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 5/217 (2%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ ++ V + +ALY L++M G P + +L+ ++ + + +FDE L
Sbjct: 98 YEAIVNAYVHSQSPDEALYFLHEMIHKGHAPISNTFNNLLNLLIRSNSFCRAWLVFDE-L 156
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
++ DVY++ + I G C+ + ++ Q++ M K G PNVV TL+ C+ GD+
Sbjct: 157 KNKVVLDVYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGCCKNGDVH 216
Query: 133 KAKGVMKEMGLKGVEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
AK + +M KG++L N HTY ++++G + E + E M P T+ +
Sbjct: 217 LAKKLFCKM--KGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSS 274
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C G I++A + ++ K A + L+
Sbjct: 275 VIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLI 311
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 40/268 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M ++GF + +I L+ G +AL + +M +G+KP + Y+ ++ +
Sbjct: 192 MTEVGFILNAYSYNGLIHLLLP---GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRR 248
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
GD K+ L +EM +GL P++YTY + I L + ++D+A I M GC P+V+T
Sbjct: 249 GDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITY 308
Query: 119 NTLLGALCEAGDLSKAKGV-----------------------------------MKEMGL 143
L+ ALC AG L KAK + EM +
Sbjct: 309 TVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G ++ TY I+++ L ++ A +L+ M K +P T++ +IC + + ++E
Sbjct: 369 DGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDE 428
Query: 204 ALELMKKIVAKSFAPGARAWEALLLHSG 231
ALEL++ + + P A ++ + + G
Sbjct: 429 ALELLENMESLGVKPTAFSYVLFIDYYG 456
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%)
Query: 34 NQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ 93
N+M+ DG PDVV YTI++ + GD + ++ D M G+ P+++TYN I GL K
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
++DEA++++++M LG KP + + ++GD +KA + M +G+ ++
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
L L I EA + ++ K P S T++ ++ C + G I++A +L+ ++++
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 214 KSFAP 218
K P
Sbjct: 544 KGCEP 548
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ +G P + +T IR L + R DA I +M +G PDV+ YT+++ + A G
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K EL+ +M PD TY ++ K ++ + + M G P+VVT
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ ALC++GD+ +A ++ M KG+ NLHTY M+ GL+ + EA LLE M
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++ I + G +A++ + + + P A A L
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASL 487
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 120/232 (51%), Gaps = 2/232 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P + ++ K +R ++ LY + ++M+ G +P+ + + I++S +V
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKR-INKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ K +L+ E++ P TY I+GL K + ++A++I + M+ GC PN V N
Sbjct: 881 NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ ++G++ A + K+M +G+ +L +Y I+++ L I EA EE+
Sbjct: 941 ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT 1000
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
P + +++ II + + ++EAL L ++ + +P + AL+LH G
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P + I + K A+ MK+ GI P + L + G
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +++F+++ GL PD TYN+ + K ++D+A Q++ MI GC+P+V+ N+
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L +AG + A + + + + TY I+L GL + +I +A L M +
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + TF++++ C+ + ++ AL++ ++ + P + ++
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 4/223 (1%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + +I L+K R A+ I +M G P+ V Y I+++G G+
Sbjct: 897 FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
ELF +M+ G+ PD+ +Y + + LC ++DEA+Q + + G P+ V+ N ++ L
Sbjct: 957 ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYR--IMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
++ L +A + EM +G+ +L+TY I+ G+ GK ++ A + EE+ P
Sbjct: 1017 GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDV--AVKMYEELQLVGLEP 1074
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
T++ +I G ++A + KK++ +P + L
Sbjct: 1075 SVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + +I LVK AL + ++ P Y ++ G++ G
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++F+EML G P+ YN+ ING K ++D A ++ M+K G +P++ +
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC G + +A +E+ L G++ + +Y +++GL + EA L EM +
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I + G ++ A+++ +++ P + AL+
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALI 1083
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + + MI L+K R +AL +L M+ G+KP Y + + GD
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + F+ M G++P + N + L + ++ EA I + + K G P+ VT N
Sbjct: 461 PAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNM 520
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +AG + KA ++ EM KG E ++ +++ L + A + +
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLK 580
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ ++ + ++G I +ALEL + P + +LL
Sbjct: 581 LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +M ++GI+PD+ YTI++ + G + + F+E+ + GL PD +YN INGL
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K ++DEA+ + M G P++ T N L+ L AG + A + +E+ L G+E ++
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
TY ++ G +A + ++M+ P + TF + + GL++
Sbjct: 1078 TYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 36/248 (14%)
Query: 16 MIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
+I+ L K ++ +DA + ++ ++ GI P + Y ++ G++ K ELF++M
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G P+ +TYN+ ++ K ++++ + M GC+PN +T N ++ AL ++ +L+KA
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 135 -----------------------KGVMK------------EMGLKGVELNLHTYRIMLDG 159
G++K EM G N Y I+++G
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
EI A L ++M+K+ P ++ ++ C+C G I+EA++ +++ P
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005
Query: 220 ARAWEALL 227
++ ++
Sbjct: 1006 TVSYNFII 1013
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ K G P + + +++ K + A +L++M G +PDV+ +++ + G
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGR 565
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F + L L P V TYN+ + GL K+ K+ +A+++ SM + GC PN +T N+
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL L + + A + M + ++ TY ++ GL+ + I A +M KK
Sbjct: 626 LLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKF 684
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS-FAPGARAWEALL 227
P T +I + + G + +A++++ + V ++ ++ W L+
Sbjct: 685 LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELM 732
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P + + L + R +A I N + + G+ PD V Y +++ G
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +L EM+ G PDV N IN L K +VD A ++ + L P VVT N
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL L + G + KA + M G N T+ +LD L + A + M
Sbjct: 591 LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL---MKKIVAKSF 216
P T++ II + ++G I+ A MKK ++ +
Sbjct: 651 CNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDY 689
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I L K R +AL + ++MK GI PD+ Y ++ + G
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++++E+ ++GL P V+TYN I G D+A + M+ +GC PN T L
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120
Query: 125 LCEAG 129
AG
Sbjct: 1121 YPRAG 1125
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ L P V+ + ++ L KE + + AL + M + G P+ + + +L +++ D
Sbjct: 576 LKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD-CLSKND 634
Query: 61 YVKLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
V L ++F M ++ PDV TYN I GL ++ ++D A M K P+ VT
Sbjct: 635 AVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLC 693
Query: 120 TLLGALCEAGDLSKA-KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
TL+ + G + A K VM+ + ++ N + +++ ++ +AEI EA
Sbjct: 694 TLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEA 744
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 123/228 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF + + +++ L + ++ IL+++ + G+ P+VV Y+I++ E
Sbjct: 164 MEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERG 223
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L D+++ G P++ +YNV + GLCK+ + ++AI++ + + G KP VV+ N
Sbjct: 224 VDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNI 283
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL +LC G +A +M M G ++ TY +++ L I +A +L+EM K
Sbjct: 284 LLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSG 343
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
F +++++ II +C++G ++ ++ + +++ + F + A+ L
Sbjct: 344 FKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIAL 391
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T ++ +L + A+ ++ +M+ +G + V Y ++ G+ G +
Sbjct: 133 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQS 192
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ D ++ GL+P+V TY++ I K+ VDEA++++D +I G KPN+V+ N LL
Sbjct: 193 MQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTG 252
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G A + KE+ KG + + ++ I+L L + EA L+ M + P
Sbjct: 253 LCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPS 312
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I + G I +A +++ ++ F A ++ ++
Sbjct: 313 VVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPII 355
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
KE R DA L Q+ G KP+V T +L + G K + + M+ G+IPD
Sbjct: 80 KEMRLNDAFLQLEQIVGKGNKPEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAA 139
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
+Y +N LC++ V A+Q+V+ M G N VT NTL+ LC G L+++ ++ +
Sbjct: 140 SYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRL 199
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
KG+ N+ TY I+++ + + EA LL++++ K P +++ ++ +C++G
Sbjct: 200 IKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRT 259
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
+A++L K++ K F P + LL
Sbjct: 260 EDAIKLFKELPEKGFKPCVVSHNILL 285
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V T ++ L + + A+ ++ M GI PD YT +++ + G+
Sbjct: 98 GNKPEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAASYTFLVNYLCRRGNVGYA 157
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L ++M G + TYN + GLC K+++++QI+D +IK G PNVVT + L+ A
Sbjct: 158 MQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEA 217
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ + +A ++ ++ KG + NL +Y ++L GL + +A L +E+ +K F P
Sbjct: 218 AYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPC 277
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++ +C +G +EA ELM + AP + L+
Sbjct: 278 VVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLI 320
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V+ ++R L E R +A ++ M +DG P VV Y ++++ + +G +
Sbjct: 273 GFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQA 332
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ DEM G +YN I LCK+ +VD +Q +D MI N T N +
Sbjct: 333 FKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAI-AL 391
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LCE G + +A +++ +G K Y+ ++ L K A +L EM F P
Sbjct: 392 LCERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPD 451
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
S T+ ++I MC++G+++EAL++ + + P + AL+L
Sbjct: 452 SYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALIL 495
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ ++I L ++ A IL +M G PD Y+ ++ G+ EG + ++F +
Sbjct: 420 YKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILE 479
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G +P V YN I GLCK ++D +I+I M+ GC PN +T N L+ AL ++
Sbjct: 480 EHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNILVEALAFEEEME 539
Query: 133 KAKGVMKEMGLKGV 146
A ++ E+ LKGV
Sbjct: 540 LAATLLNELYLKGV 553
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 24 ERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
ERGM +A IL ++ + P Y V++ + +G+ ++ EM V G PD Y
Sbjct: 394 ERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSY 453
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TY+ I G+C++ +DEA+QI + + G P+V N L+ LC++ + + + + M
Sbjct: 454 TYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMM 513
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
KG N TY I+++ L + E+ A+ LL E+ K +S+
Sbjct: 514 VNKGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQST 558
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%)
Query: 26 GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNV 85
G+ L+I M + G+ PD Y I+++G + LF+EM + P+V TYN
Sbjct: 76 GLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNS 135
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
INGLC+ ++ A+++VD M G PN++T N++L LC+ D+ KA + ++ +
Sbjct: 136 LINGLCRSGRISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQD 195
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ +++TY I++ GL + +A + E +L K + T+ +I C KGL EA
Sbjct: 196 IQPSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLFGEAF 255
Query: 206 ELMKKI 211
L+ K+
Sbjct: 256 TLLSKM 261
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + MI K + +A+ + +M I P+VV Y +++G+ G
Sbjct: 86 MARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGR 145
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM G P++ TYN ++ LCK VD+AI + + +P++ T N
Sbjct: 146 ISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQPSMYTYNI 205
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ LC+ G L A+ V + + +KG L+ +TY IM+ G K GEA LL +M
Sbjct: 206 LIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLFGEAFTLLSKM 261
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 118/227 (51%), Gaps = 6/227 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG---DYVKL 64
P V+ ++ +I + K++ D + + ++M I P++V Y ++ G G D L
Sbjct: 18 PDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLNDAFGL 77
Query: 65 DELF--DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+LF M G+ PD +Y + ING CK VDEA+ + + M PNVVT N+L+
Sbjct: 78 LQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLI 137
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC +G +S A ++ EM +G N+ TY +LD L ++ +A + L ++ +
Sbjct: 138 NGLCRSGRISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVDKAIVFLTKLKDQDIQ 197
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
P T++ +I +C+ G + +A ++ + ++ K + A + +++H
Sbjct: 198 PSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTY-TIMIH 243
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P V+ + ++++ A+ I+ QM+++ + + ++ G G+
Sbjct: 541 KDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETR 600
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN-------- 114
+ E+FD M G IP V+TYN I GL ++ ++++A+QI+D M G PN
Sbjct: 601 RALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLM 660
Query: 115 ---------------------------VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
V T LL A C++G + A V KEM K +
Sbjct: 661 QGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIP 720
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N Y I++DG + ++ EA+ L+++M K+ P T+ + I C+ G + A ++
Sbjct: 721 RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQV 780
Query: 208 MKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+K++ A+ P + + L+H + + E
Sbjct: 781 IKEMEARGIKPNLKTY-TTLIHGWARAAFPE 810
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V + +I LV++ + AL IL++M G+ P+ YT ++ G + GD
Sbjct: 609 MRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLMQGYASLGD 668
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + F + GL DVYTY + CK ++ A+ + M N N
Sbjct: 669 TEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNI 728
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ GD+ +A +M++M +GV+ ++HTY ++ ++ A+ +++EM +
Sbjct: 729 LIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARG 788
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET- 239
P T+ +I + +AL+ + + P + L+ S T +++
Sbjct: 789 IKPNLKTYTTLIHGWARAAFPEKALKCFEDLKVAGLKPDRAVYHCLMTSLLSRATIAQSY 848
Query: 240 TFAGLFN 246
++GL +
Sbjct: 849 IYSGLLS 855
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ GF P ++ + +I K + AL I MK GIK ++ Y+++ +G V D
Sbjct: 469 LKECGFSPSIVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKD 528
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F+++ GL PDV YN + C +D AI IV M + + T
Sbjct: 529 WANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLP 588
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ AG+ +A + M G +HTY ++ GLV K ++ +A +L+EM
Sbjct: 589 IIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAG 648
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ ++ G +A + + +EALL
Sbjct: 649 VSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALL 695
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 92/198 (46%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
L + ++K+ G P +V Y +++ G K E+ M +G+ ++ TY++ NG
Sbjct: 463 LIVFERLKECGFSPSIVSYGCLINLYTKIGKVSKALEISRVMKTVGIKHNMKTYSMLFNG 522
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
K A + + + K G KP+V+ N ++ A C G++ +A ++K+M +
Sbjct: 523 FVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRAT 582
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
T+ ++ G E A + + M + P T++ +I + +K + +AL+++
Sbjct: 583 TRTFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILD 642
Query: 210 KIVAKSFAPGARAWEALL 227
++ +P + L+
Sbjct: 643 EMNLAGVSPNEHTYTTLM 660
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 104/258 (40%), Gaps = 35/258 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P ++ +I +AL + +MK +GI+ +V Y+I++ G G+
Sbjct: 329 MRARGIEPSSHVYSSLIHAYAVGRDMEEALNCVRKMKDEGIEMSIVTYSIIVGGFAKLGN 388
Query: 61 YVKLDELFDE-----------------------------------MLVLGLIPDVYTYNV 85
D F E M G+ + Y+
Sbjct: 389 ADAADNWFKEAKESLPSLNAVIYGSIIYAHCQACKMGRAEALVREMEEQGIDAPIDIYHT 448
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++G ++ + + + + + G P++V+ L+ + G +SKA + + M G
Sbjct: 449 MMDGYTMIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYTKIGKVSKALEISRVMKTVG 508
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
++ N+ TY ++ +G V + A + E++ K P ++NI+ C G ++ A+
Sbjct: 509 IKHNMKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAI 568
Query: 206 ELMKKIVAKSFAPGARAW 223
++K++ + R +
Sbjct: 569 CIVKQMQRERHRATTRTF 586
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ MI++ + A M+ GI+P Y+ ++ D +
Sbjct: 301 PARKEYGLMIKYYARRGDMHHARQAFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALNC 360
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G+ + TY++ + G K D A + N V +++ A C+
Sbjct: 361 VRKMKDEGIEMSIVTYSIIVGGFAKLGNADAADNWFKEAKESLPSLNAVIYGSIIYAHCQ 420
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LVGKAEIGEASLLLEEMLKKC-FYPR 184
A + +A+ +++EM +G++ + Y M+DG ++G E L++ E LK+C F P
Sbjct: 421 ACKMGRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEE---KCLIVFERLKECGFSPS 477
Query: 185 SSTFDNIICCMCQKGLINEALELMK 209
++ +I + G +++ALE+ +
Sbjct: 478 IVSYGCLINLYTKIGKVSKALEISR 502
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 111/215 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + +T ++ L + ++A ++N ++ P+ + Y+ V+ G+ EG
Sbjct: 469 MYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGK 528
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L EM+ G +P+ N+ I LC+ V A + ++ + GC NVV +
Sbjct: 529 LSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTS 588
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+ GDL A ++++M L + TY + D L K+ + EAS L+ +ML K
Sbjct: 589 VIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKG 648
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
P T+ +I CQ G +++ ++L++K++A+
Sbjct: 649 IDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ 683
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 90/190 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +I L K DAL L + ++ G D V Y+ V+ + K L
Sbjct: 371 PDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSL 430
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+M G PDV TY I+G C+ K+DEA +++ M K GCKPN VT LL LC
Sbjct: 431 VIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCH 490
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G +A+ ++ N TY ++ GL + ++ EA L EM++K F P
Sbjct: 491 NGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVD 550
Query: 188 FDNIICCMCQ 197
+ +I +C+
Sbjct: 551 INLLIQSLCR 560
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P V+ +T +I + + +A +L QM + G KP+ V YT++L+G+ G
Sbjct: 434 MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ E+ + P+ TY+ ++GL ++ K+ EA + MI+ G PN V N
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINL 553
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ +LC ++ AK ++E KG +N+ + ++ G ++ A +LE+M
Sbjct: 554 LIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSN 613
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P + T+ + + +K ++EA EL+ K++ K P + A++
Sbjct: 614 KHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 10/245 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P + I LVK + AL L +MK GI+PD+V Y ++ G D
Sbjct: 258 MQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC---D 314
Query: 61 YVKLD---ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVV 116
++D EL EM G PD +Y + LCK KV+E +++++M++ P+ V
Sbjct: 315 VHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV 374
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T NTL+ AL + G A ++E KG ++ Y ++D I +A L+ +M
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 233
K P T+ II C+ G I+EA ++++++ P + L L H+G
Sbjct: 435 YSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKS 494
Query: 234 LTYSE 238
L E
Sbjct: 495 LEARE 499
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 36/255 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P ++ + +I+ R DAL ++ +M G PD V Y V++ + +
Sbjct: 293 MKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRK 352
Query: 61 YVKLDELFDEMLV-LGLIPDVYTYNVYI-------------------------------- 87
++ L + M+ LIPD TYN I
Sbjct: 353 VEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYS 412
Query: 88 ---NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ CK +D+A +V M GC P+VVT ++ C G + +AK ++++M
Sbjct: 413 AVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH 472
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G + N TY ++L+GL + EA ++ + + P + T+ ++ + ++G ++EA
Sbjct: 473 GCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Query: 205 LELMKKIVAKSFAPG 219
+L ++++ K F P
Sbjct: 533 CDLTREMIEKGFLPN 547
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 1/216 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
R+ + + + M+ L K A IL M + GI+ ++ V+ G
Sbjct: 189 RQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGML 248
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ M G+ PD+ N I L K NK+++A++ ++ M G +P++V+ N L
Sbjct: 249 RNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCL 308
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC- 180
+ C+ + A ++ EM KG + +Y ++ L ++ E L+E M++
Sbjct: 309 IKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSN 368
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P T++ +I + + G ++AL +++ K F
Sbjct: 369 LIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGF 404
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 52/273 (19%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + K + DA + ++M I PDV+ Y+ ++SG G L
Sbjct: 48 PNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGL 107
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F++M + PDVYT+N+ ++ CK+ +V EA ++ M+K G KP+VVT NTL+ C
Sbjct: 108 FNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCL 167
Query: 128 AGDLSKAKGVMKEMG--------------------------------------------- 142
+++ AK + M
Sbjct: 168 VKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPD 227
Query: 143 -------LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
L G+ +++TY I + GL ++ +A + E++L K + T+ +I
Sbjct: 228 IITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGF 287
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
C KGL EAL L+ K+ P A+ +E ++L
Sbjct: 288 CDKGLFKEALALLSKMEDNGCIPDAKIYEIVIL 320
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--IVAEGDYVK-- 63
P V F + KE R +A Y+L+ M + GIKP VV Y +++G +V E + K
Sbjct: 118 PDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDI 177
Query: 64 ------------LDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK 108
+DE L++EM IPDV TY+ ++ + + + + I + I
Sbjct: 178 FNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITY--NSIL 235
Query: 109 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 168
G +P++ T + LC++G L A+ V +++ +KG L+++TY +M+ G K E
Sbjct: 236 DGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKE 295
Query: 169 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
A LL +M P + ++ +I + +K + A +L+++++A+
Sbjct: 296 ALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIAR 341
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ ++ + +RG I DGI+PD+ YTI + G+ G ++
Sbjct: 207 PDVVTYSSLVDIM--HDRGQPPDIITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDARKV 264
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+++LV G DVYTY V I G C + EA+ ++ M GC P+ ++ +L E
Sbjct: 265 FEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVILSLFE 324
Query: 128 AGDLSKAKGVMKEMGLKGV 146
+ A+ +++EM +G+
Sbjct: 325 KDENDMAEKLLREMIARGL 343
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 65/140 (46%)
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK + A+Q++ + +PNV+ +T++ +C+ ++ A + EM K +
Sbjct: 23 DGSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRIS 82
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY ++ G ++ + L +M + P TF+ + C++G + EA +
Sbjct: 83 PDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYV 142
Query: 208 MKKIVAKSFAPGARAWEALL 227
+ ++ P + L+
Sbjct: 143 LSMMMKHGIKPSVVTYNTLM 162
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 123/228 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF + + +++ L + ++ IL+++ + G+ P+VV Y+I++ E
Sbjct: 39 MEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERG 98
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +L D+++ G P++ +YNV + GLCK+ + ++AI++ + + G KP VV+ N
Sbjct: 99 VDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNI 158
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL +LC G +A +M M G ++ TY +++ L I +A +L+EM K
Sbjct: 159 LLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEMTKSG 218
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
F +++++ II +C++G ++ ++ + +++ + F + A+ L
Sbjct: 219 FKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIAL 266
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P +T ++ +L + A+ ++ +M+ +G + V Y ++ G+ G +
Sbjct: 8 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQS 67
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ D ++ GL+P+V TY++ I K+ VDEA++++D +I G KPN+V+ N LL
Sbjct: 68 MQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTG 127
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G A + KE+ KG + + ++ I+L L + EA L+ M + P
Sbjct: 128 LCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPS 187
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I + G I +A +++ ++ F A ++ ++
Sbjct: 188 VVTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPII 230
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P V+ ++R L E R +A ++ M +DG P VV Y ++++ + +G +
Sbjct: 148 GFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQA 207
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++ DEM G +YN I LCK+ +VD +Q +D MI N T N +
Sbjct: 208 FKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAI-AL 266
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LCE G + +A +++ +G K Y+ ++ L K A +L EM F P
Sbjct: 267 LCERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPD 326
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
S T+ ++I MC++G+++EAL++ + + P + AL+L
Sbjct: 327 SYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALIL 370
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M GI PD YT +++ + G+ +L ++M G + TYN + GLC K
Sbjct: 4 MVSSGIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGK 63
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+++++QI+D +IK G PNVVT + L+ A + + +A ++ ++ KG + NL +Y +
Sbjct: 64 LNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNV 123
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+L GL + +A L +E+ +K F P + + ++ +C +G +EA ELM +
Sbjct: 124 LLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDG 183
Query: 216 FAPGARAWEALL 227
AP + L+
Sbjct: 184 QAPSVVTYNVLI 195
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ ++I L ++ A IL +M G PD Y+ ++ G+ EG + ++F +
Sbjct: 295 YKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSSLIRGMCREGMLDEALQIFGILE 354
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G +P V YN I GLCK ++D +I+I M+ GC PN +T N L+ AL ++
Sbjct: 355 EHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMMVNKGCMPNEMTYNILVEALAFEEEME 414
Query: 133 KAKGVMKEMGLKGV 146
A ++ E+ LKGV
Sbjct: 415 LAATLLNELYLKGV 428
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 24 ERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
ERGM +A IL ++ + P Y V++ + +G+ ++ EM V G PD Y
Sbjct: 269 ERGMVKEAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSY 328
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TY+ I G+C++ +DEA+QI + + G P+V N L+ LC++ + + + + M
Sbjct: 329 TYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDNYNALILGLCKSQRIDMSIEIFQMM 388
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
KG N TY I+++ L + E+ A+ LL E+ K +S+
Sbjct: 389 VNKGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGVLSQST 433
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+T +I L K + DA + ++M I DV Y ++SG A LF++M
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMT 61
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ PDVYT+N+ ++G CK +V EA ++ MIK KP VVT ++L+ C +++
Sbjct: 62 AENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVN 121
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
KAK + M +GV N+ +Y M++G + EA L EEM + + +I
Sbjct: 122 KAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLI 181
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C+ G I+ AL+L+ ++ + P + ++L
Sbjct: 182 DGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSIL 216
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ K+ R +A +L M +D IKP VV Y+ ++ G + K E+
Sbjct: 67 PDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKAKEI 126
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FD M G++ +V +Y ING CK VDEAI + + M NV+ + L+ LC+
Sbjct: 127 FDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDGLCK 186
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
+G +S A ++ EM +G N+ Y +LD L + +A
Sbjct: 187 SGRISYALKLVDEMHDRGQPPNIVIYSSILDALCKNHRVDQA 228
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ + N+M + I PDV + I++ G +G + + M+ + P V TY+ +
Sbjct: 52 DAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLM 111
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G C N+V++A +I DSM G NV + T++ C+ + +A + +EM + +
Sbjct: 112 DGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKII 171
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ Y ++DGL I A L++EM + P + +I+ +C+ +++A+ L
Sbjct: 172 RNVLIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDALCKNHRVDQAIAL 231
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG P + + +I + + DAL ILN+MK GI P+ V Y I++ G+ G
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K + DEMLV+ +P T+ + + K D+ +QI + ++ G + ++ NT
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G KAK V+ EM +G+ +L TY ++ G + + +A +M
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 840
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVA----KSFAPGARAWEALL 227
P +T++ ++ + GL+ E +E +K+V+ + P A ++ L+
Sbjct: 841 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 115/227 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P + + +I L K R M+A + +QM GI D+V T V+ G+ G
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +E+F+ +L L L P+ TY+ ++G CK K++ A ++ M K PNV+T ++
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + G LSKA V++EM + V N Y I++DG E A +EM +
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRR 561
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ FD ++ + + G ++EA L+ + +K P + +L+
Sbjct: 562 LEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLI 608
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 12/226 (5%)
Query: 8 PGVMDFTDMI----RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
P ++ +T +I +F+ EE +LY +M +GI PDVV + +L G G +
Sbjct: 319 PTLVTYTTLIAAYCKFVGVEES--HSLY--KKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
LF EM +GL P+ +Y IN L K +V EA + M+ G ++VTC T++
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL--VGKAEIGEASLLLEEMLKKCF 181
L + G +A+ V + + + N TY +LDG +GK E+ E L+L++M K+
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE--LVLQKMEKEHV 492
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +II +KG++++A+++++++V ++ P + L+
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD 65
F P + +++ + E+ L I ++ G++ + Y +++ G K
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+ DEM+ G+ D+ TYN I G C + V++A++ M G PN+ T NTLLG L
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 855
Query: 126 CEAG----DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE-EMLKKC 180
AG + + + ++ EM +G+ N TY I++ G G+ + +++L EM+ K
Sbjct: 856 SNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY-GRVGNRKKTIILHIEMITKG 914
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
F P T++ +I + G + EA EL+ ++ K P + ++ L
Sbjct: 915 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 34/261 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++++ +I KE + AL I+ +MK+ I+ DVV Y ++ G++ G
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651
Query: 61 Y---------VKLD-------------------------ELFDEMLVLGLIPDVYTYNVY 86
Y ++L ++ +EM G++P+ TYN+
Sbjct: 652 YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I GLCK V++A +D M+ + P +T L+ A + K + +++ G+
Sbjct: 712 IGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGL 771
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
EL+L Y ++ +A ++L+EM+K+ T++ +I C + +AL+
Sbjct: 772 ELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALK 831
Query: 207 LMKKIVAKSFAPGARAWEALL 227
++ AP + LL
Sbjct: 832 TYSQMFVDGIAPNITTYNTLL 852
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 96/184 (52%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + ++ + + +A + +M + G+ P+ V Y +++ + G ++
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +M+V G+ D+ T ++GL K K EA ++ ++++KL PN VT + LL
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + A+ V+++M + V N+ T+ +++G K + +A +L EM+++ P
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530
Query: 185 SSTF 188
+ +
Sbjct: 531 TIVY 534
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V+ F+ +I K+ A+ +L +M Q + P+ + Y I++ G G+
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
D+ EM L +++ +N L + ++DEA ++ M G P++V +
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + G+ A +++EM K + ++ Y ++ GL+ + + + M++
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELG 665
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ II C KG +AL+++ ++ + P A + L+
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 33/234 (14%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F +IR + +R A + M+ G+ P + + +L A G ++ ++ +ML
Sbjct: 62 FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 73 VLGLIPDVY---------------------------------TYNVYINGLCKQNKVDEA 99
G++PDV+ TYN I G C++ VD+
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++ M+K G + +TCN L+ C G + A+ VM + GV ++ ++DG
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+ +A+ L+E + T++ ++ C+ G + A L +I+
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILG 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 19/209 (9%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
D + D V Y V+ G +G + L EM+ GL D T N+ + G C+ V
Sbjct: 155 NDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
A ++ +++ G +V+ NTL+ CEAG +S+A +++ V++++ TY +L
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLL 274
Query: 158 DGLVGKAEIGEASLLLEEMLK-------------------KCFYPRSSTFDNIICCMCQK 198
++ A L E+L K P T+ +I C+
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334
Query: 199 GLINEALELMKKIVAKSFAPGARAWEALL 227
+ E+ L KK++ P ++L
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSIL 363
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG- 59
M K G ++ + +IR AL +QM DGI P++ Y +L G+ G
Sbjct: 801 MVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 860
Query: 60 ---DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
+ ++L EM GL+P+ TY++ ++G + + I + MI G P +
Sbjct: 861 MEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLK 920
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
T N L+ ++G + +A+ ++ ++ KG N TY I+ G
Sbjct: 921 TYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 87/208 (41%), Gaps = 19/208 (9%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A +++ + G+ DV+ ++ G G + EL + + D+ TYN +
Sbjct: 216 AEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLK 275
Query: 89 GLCKQNKVDEAIQIVDSMIKL-------------------GCKPNVVTCNTLLGALCEAG 129
CK + A + + ++ +P +VT TL+ A C+
Sbjct: 276 AFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFV 335
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ ++ + K+M + G+ ++ T +L G ++ EA++L EM + P ++
Sbjct: 336 GVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYA 395
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFA 217
II + + G + EA L ++V + +
Sbjct: 396 TIINSLFKSGRVMEAFNLQSQMVVRGIS 423
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
++++M + G+ P+ Y I++SG G+ K L EM+ G +P + TYNV I+
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930
Query: 92 KQNKVDEAIQIVDSMIKLGCKPN-----VVTCNTLLGALCEAGDLS-------KAKGVMK 139
K K+ EA ++++ ++ G PN ++TC L + D S + K ++
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLI 990
Query: 140 EMGLKGVELN 149
EMG KG++ +
Sbjct: 991 EMGRKGLKFS 1000
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 113/215 (52%), Gaps = 8/215 (3%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI--------KPDVVCYTIVLSGIVAEG 59
P V F ++ L K+ + +A ++ +M + + KP+ V Y ++ G G
Sbjct: 350 PNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSG 409
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+L D+M G P+V TYN ++ LCK + VD+AI +V++ G +P++ T N
Sbjct: 410 RLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYN 469
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TL+ LC+ G L A+ + +++ +KG L TY IM++GL + + EA LL +M
Sbjct: 470 TLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDN 529
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P T+ II + +K ++A +L+++++ +
Sbjct: 530 GCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVR 564
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 109/207 (52%), Gaps = 8/207 (3%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK--------LDELFDEMLVLGLIPDV 80
A + ++M I P+V + I++ + +G + +DE + + P+
Sbjct: 336 AFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNT 395
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
+YN I+G CK ++ A +++D M G PNV+T N+LL ALC+ + KA ++
Sbjct: 396 VSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNN 455
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+G++ ++HTY ++DGL + + +A L+ +++L K + + T++ +I +C +GL
Sbjct: 456 FKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGL 515
Query: 201 INEALELMKKIVAKSFAPGARAWEALL 227
++EA L+ K+ P ++ ++
Sbjct: 516 LDEAETLLSKMEDNGCIPDVVTYQTII 542
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V+ + ++ L K A+ ++N K GI+PD+ Y ++ G+ +G
Sbjct: 421 MRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGR 480
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L+ G +TYN+ INGLC + +DEA ++ M GC P+VVT T
Sbjct: 481 LKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQT 540
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ AL E + KA+ +++E+ ++G+
Sbjct: 541 IIHALFEKDENDKAEKLVRELIVRGL 566
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILN-QMKQDGIKPDVVCYTIVLSGIVAEG 59
M ++ P +++F ++ +L+K + + L+ QM+ G+KPD+ +I+++
Sbjct: 161 MLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY---- 216
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
Y K+ G P+ T I GLC KV+EA+ D ++ LG N VT
Sbjct: 217 -YFKM----------GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYG 265
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ LC+ G A V++++ K V N+ Y ++DGL + +A L EM+ K
Sbjct: 266 ILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVK 325
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF +A L ++V K+ P + L+
Sbjct: 326 RIPPTVVTF--------------KAFSLFHEMVLKNINPNVYTFNILV 359
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIV-AEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+A+ N+M Q P +V + +L+ ++ + Y + L +M G+ PD++T ++
Sbjct: 153 NAVLSFNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSIL 212
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
IN K+G +PN +T TL+ LC G +++A + G
Sbjct: 213 INCY---------------YFKMGYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGF 257
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
LN TY I+++GL + A +L ++ K + +I +C+ L+ +A
Sbjct: 258 HLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYG 317
Query: 207 LMKKIVAKSFAPGARAWEALLL 228
L +++ K P ++A L
Sbjct: 318 LYSEMIVKRIPPTVVTFKAFSL 339
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 115/215 (53%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ ++ L E R +A+ +L++M+ +G P+ V + +++S + +GD + +L D M
Sbjct: 213 YSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMF 272
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ G +P+ TYN ++GLC + K+D+A+ +++ M+ C PN +T TL+ + G
Sbjct: 273 LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 332
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
V+ + KG N +Y ++ GL + + L +EM++K P + + +I
Sbjct: 333 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 392
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C++G +EA E + ++ K P + + +L+
Sbjct: 393 DGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLM 427
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F ++ VK R +D + +L +++ G + + Y+ ++SG+ EG +L
Sbjct: 313 PNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQL 372
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ EM+ G P+ Y+ I+GLC++ K DEA + + M G PN T ++L+ E
Sbjct: 373 WKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFE 432
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
AGD+ KA V KEM + Y I+++GL ++ EA ++ ++ML +
Sbjct: 433 AGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 492
Query: 188 FDNIICCMCQKGLINEALELMKKIV 212
+ ++I C L+ + ++L +++
Sbjct: 493 YSSMIHGFCNAQLVEQGMKLFNQML 517
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%)
Query: 31 YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGL 90
++++ I+P+ + + +V+ + G+ + E+F M + D YTY+ ++GL
Sbjct: 161 HVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGL 220
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
C + ++DEA+ ++D M G PN V N L+ ALC+ GDLS+A ++ M LKG N
Sbjct: 221 CNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNE 280
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY ++ GL K ++ +A LL M+ P TF ++ + G + + ++
Sbjct: 281 VTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVS 340
Query: 211 IVAKSFAPGARAWEALL 227
+ K + ++ +L+
Sbjct: 341 LEEKGYRGNEFSYSSLI 357
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F +I+ L + A+ + M D Y+ ++ G+ EG + L
Sbjct: 173 PNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSL 232
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM V G P+ +NV I+ LCK+ + A ++VD+M GC PN VT N+L+ LC
Sbjct: 233 LDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G L KA ++ M N T+ ++DG V + +L + +K + +
Sbjct: 293 KGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS 352
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++I + ++G ++L K++V K P + AL+
Sbjct: 353 YSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 392
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 6/218 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ ++ +I L KE +G + + +M + G KP+ + Y+ ++ G+ EG +
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEA 404
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E EM G P+ +TY+ + G + + +AI + M C + V + L+
Sbjct: 405 KEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILING 464
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L +A V K+M +G++L++ Y M+ G + + L +ML C P+
Sbjct: 465 LCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML--CHNPK 522
Query: 185 SS----TFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T++ ++ C K ++ A++++ ++ + P
Sbjct: 523 LQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP 560
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
++ +I L K + +AL + QM GIK DVV Y+ ++ G + +LF++ML
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517
Query: 73 VLG--LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
L PDV TYN+ +N C +N V AI I+++M+ GC P+ +TC+ L L + D
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMD 577
Query: 131 LSK-AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ + + E+ ++ L+ + AS ++E ML+K P+ ST+
Sbjct: 578 PPQDGREFLDELVVR---------------LIKRQRTVGASNIIEVMLQKFLLPKPSTWA 622
Query: 190 NIICCMCQ 197
+ +C+
Sbjct: 623 LAVQQLCK 630
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 107/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ L + + A+ +LN+M + P+ + + ++ G V G +
Sbjct: 275 GCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDG 334
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + G + ++Y+ I+GL K+ K + +Q+ M++ GCKPN + + L+
Sbjct: 335 VRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDG 394
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G +AK + EM KG N TY ++ G +I +A L+ +EM
Sbjct: 395 LCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 454
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C+ G + EAL + K+++++ A+ +++
Sbjct: 455 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMI 497
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 80 VYTYNVYINGLCKQNKVDEAIQ----IVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
V ++N +N + ++ D A++ ++DS +PN ++ N ++ ALC G++ +A
Sbjct: 136 VKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAV 195
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V + M + + +TY ++ GL + I EA LL+EM + +P F+ +I +
Sbjct: 196 EVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISAL 255
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+KG ++ A +L+ + K P + +L+
Sbjct: 256 CKKGDLSRASKLVDNMFLKGCVPNEVTYNSLV 287
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A + +MK GI PDV Y+I++ G +G + E+F EM G++P++Y+Y++ I
Sbjct: 269 EASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILI 328
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+G CK+ +VD+A+++ + M G P+V + + L+ C GD+ A +EM
Sbjct: 329 DGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFS 388
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ Y ++ G + A M K +P + ++I+ C+K N+AL L
Sbjct: 389 PSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALAL 448
Query: 208 MKKI 211
+K
Sbjct: 449 SEKF 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V ++ +I ++ R A + +M+ GI P++ Y+I++ G EG
Sbjct: 277 MKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGR 336
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMI------------- 107
K E+F+EM G++PDVY+Y++ I+G C++ +D AI+ + M
Sbjct: 337 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCS 396
Query: 108 ----------------------KLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
KLG P+ + CN +L C D +KA + ++ G
Sbjct: 397 LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 456
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
V N ++Y + + + +A LL MLK+ P + +I C ++ +A+
Sbjct: 457 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAV 516
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L K+ + + L+
Sbjct: 517 MLFIKMTKVGITFNVKTYTILI 538
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 82/146 (56%)
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
C+ V+ G+ G + E+F EM G++PDVY+Y++ I+G C++ +VD+A ++ M
Sbjct: 253 CFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 312
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
G PN+ + + L+ C+ G + KA V +EM G+ ++++Y I++DG K ++
Sbjct: 313 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 372
Query: 167 GEASLLLEEMLKKCFYPRSSTFDNII 192
A EEM F P + + ++I
Sbjct: 373 DSAIKFWEEMTSNNFSPSAFNYCSLI 398
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGM-------DALYILNQMKQDGIKPDVVCYTIVLSGI 55
K G P + +T M+ F RG+ A IL ++ G P+VV Y + G+
Sbjct: 170 KFGPRPNIHTYTIMMNFFC---RGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGL 226
Query: 56 VAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
G + L + + + +N I GLC+ +DEA ++ M G P+V
Sbjct: 227 CKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 286
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
+ + L+ C G + +A V KEM G+ N+++Y I++DG + + +A + EE
Sbjct: 287 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 346
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M P ++ +I C+KG ++ A++ +++ + +F+P A + +L+
Sbjct: 347 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 398
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 112/223 (50%), Gaps = 4/223 (1%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLS----GIVAEGDYVKL 64
+M +++ LV++ R + + + G +P++ YTI+++ G+ D +
Sbjct: 141 NIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRA 200
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ ++ + G P+V TY YI GLCK A +++ ++ + N N ++
Sbjct: 201 SEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYG 260
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC+ G L +A V KEM G+ ++++Y I++DG K + +AS + +EM P
Sbjct: 261 LCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPN 320
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +I C++G +++ALE+ +++ P ++ L+
Sbjct: 321 IYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILI 363
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M K+G V +T +I + + + MD Y + MK+ + PD + YT +++G G
Sbjct: 522 MTKVGITFNVKTYTILINLFISDCK-MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTG 580
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ + LFDEM G P+V TY +IN K NK ++A ++ + M + G P+ +
Sbjct: 581 EMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYT 640
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ A C G++++A+ + EM +G N+ Y +++ + + +A L EEM
Sbjct: 641 MLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRA 700
Query: 179 K 179
K
Sbjct: 701 K 701
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M F P ++ +I+ K ++ +AL M++ G+ PD + +LS + D
Sbjct: 382 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 441
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K L ++ G+ + Y+YN +I+ +C+ + ++A+Q++ M+K P+VV +T
Sbjct: 442 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 501
Query: 121 LLGALCEAGDLSKAKGVM--KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ C A L+ K VM +M G+ N+ TY I+++ + ++ A L + M +
Sbjct: 502 LIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKE 559
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
YP + +++ C G + A L ++ + +P + +
Sbjct: 560 SRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 608
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F +I+ A Y+ + K DGI+ +++ +L +V + + LF+ ++
Sbjct: 110 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 169
Query: 73 VLGLIPDVYTYNVYINGLCK----QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
G P+++TY + +N C+ + A +I+ + G PNVVT T + LC+
Sbjct: 170 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKV 229
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTF 188
G A +++ + K LN H + ++ GL + EAS + +EM P ++
Sbjct: 230 GLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSY 289
Query: 189 DNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I C+KG +++A E+ K++ P ++ L+
Sbjct: 290 SILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILI 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 12 DFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
+ + I + + AL +L M + + PDVV Y+ ++S + K LF +M
Sbjct: 463 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 522
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
+G+ +V TY + IN K+D A ++ M + P+ + +L+ C G++
Sbjct: 523 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 582
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
++A+ + EM +G N+ TY ++ + + +A L E+M ++ YP + +
Sbjct: 583 TRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTML 642
Query: 192 ICCMCQKGLINEALELMKKI 211
I C G +N A L ++
Sbjct: 643 IAAFCNTGEMNRAEALFDEM 662
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K P V++++ +I K A+ + +M + GI +V YTI+++ +++
Sbjct: 487 MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCK 546
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF M + PD Y + G C ++ A + D M + GC PNVVT
Sbjct: 547 MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 606
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ + ++A + ++M +GV + Y +++ E+ A L +EM ++
Sbjct: 607 FINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQE- 665
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
N++ C LIN ++L K+ A+ RA
Sbjct: 666 ----GRCTPNVVMYTC---LINSYIKLNKRDQAEKLYEEMRA 700
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYN 84
DA + +M GI P+VV YT ++ G G KL+E LF +M+ + P+VYT+N
Sbjct: 9 DAFDLYYEMVASGISPNVVTYTALIDGFCVVG---KLEEALGLFKKMISENINPNVYTFN 65
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
++ CK+ K++EA ++++M++ K +VV ++L+ C ++ KA+ + K M +
Sbjct: 66 GLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAER 125
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
+ ++ +Y IM++ + EA L EEM K +P T+ +I +C+ G ++ A
Sbjct: 126 ELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYA 185
Query: 205 LELMKKIVAKSFAPGARAW 223
+EL+ ++ + P +
Sbjct: 186 MELVDEMDDRGEPPNIITY 204
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ KE + +A +LN M + +K DVV Y+ +++G + K +
Sbjct: 59 PNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSI 118
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M L DV +YN+ IN CK VDEAI++ + M P+VVT +TL+ LC+
Sbjct: 119 FKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCK 178
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+G LS A ++ EM +G N+ TY ++D L
Sbjct: 179 SGRLSYAMELVDEMDDRGEPPNIITYCPIVDVL 211
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 86/162 (53%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+L+ EM+ G+ P+V TY I+G C K++EA+ + MI PNV T N L+ A
Sbjct: 12 DLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAF 71
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G + +AK V+ M K ++ ++ Y +++G E+ +A + + M ++
Sbjct: 72 CKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDV 131
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+++ +I C+ +++EA++L +++ K P + L+
Sbjct: 132 RSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLI 173
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 67/138 (48%)
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
+CK V++A + M+ G PNVVT L+ C G L +A G+ K+M + + N
Sbjct: 1 MCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPN 60
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
++T+ ++D + +I EA +L M++K + +++ C + +A + K
Sbjct: 61 VYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFK 120
Query: 210 KIVAKSFAPGARAWEALL 227
+ + + R++ ++
Sbjct: 121 TMAERELSYDVRSYNIMI 138
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEG 59
+R G P V+ + +I + A LN++ +G + PDVV YT ++SG
Sbjct: 239 LRSFGCSPDVITYNTIIHGFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLS 298
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ LFDEM+ G +P+ +T+N I+G K + ++ + M+ GC P+VVT
Sbjct: 299 RMKEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFT 358
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ G + A + EM + V +L+T+ ++++G + EA +L + +
Sbjct: 359 SLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQS 418
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
P+S ++ +I C+ G ++EA +++ ++ P + L++
Sbjct: 419 DVVPQSFVYNPVIDGYCKSGNVDEANKILAEMEENRCKPDKLTYTILII 467
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 113/235 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P F +I VK +L + ++M G PDVV +T +++G G
Sbjct: 310 MIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQ 369
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+++EM + +YT++V +NG CK N++ EA I+ + + P N
Sbjct: 370 VKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNP 429
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C++G++ +A ++ EM + + TY I++ G K + EA + ++ML C
Sbjct: 430 VIDGYCKSGNVDEANKILAEMEENRCKPDKLTYTILIIGHCSKGRMAEAIGIFDKMLAVC 489
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLT 235
P T +N+ C+ + G+ EA + + + K + + ++ + +D+T
Sbjct: 490 CAPDEITINNLRSCLLKAGMPAEAARVKQALCHKHNSSTSLKKKSFHESTNADIT 544
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
+L +CP ++R L + +A +L ++ G PDV+ Y ++ G +
Sbjct: 206 RLRYCPVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVD 265
Query: 63 KLDELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ +E+ + G + PDV +Y I+G CK +++ EA + D MI+ G PN T N L
Sbjct: 266 RARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPNAFTFNAL 325
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + GD++ + + +M +G ++ T+ +++G ++ A + EM +
Sbjct: 326 IDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKV 385
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF ++ C+ ++EA +++ ++ P + + ++
Sbjct: 386 AASLYTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVI 431
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 89/163 (54%), Gaps = 1/163 (0%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+LF E++ L P YT N+ + GLC+ ++DEA +++ + GC P+V+T NT++
Sbjct: 199 DLFWELVRLRYCPVTYTINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGF 258
Query: 126 CEAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C ++ +A+ + E+ L G V ++ +Y ++ G + + EAS L +EM++ P
Sbjct: 259 CRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPN 318
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ TF+ +I + G + +L + K++ + P + +L+
Sbjct: 319 AFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLI 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 9/229 (3%)
Query: 15 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
D+ L+ + + +A+ + ++ + P I++ G+ G+ + +L ++
Sbjct: 183 DLFNILIIKNKAREAVDLFWELVRLRYCPVTYTINILMRGLCRAGEIDEACKLLGDLRSF 242
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSK 133
G PDV TYN I+G C+ ++VD A ++ + G P+VV+ T++ C+ + +
Sbjct: 243 GCSPDVITYNTIIHGFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRMKE 302
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A + EM G N T+ ++DG V ++ + + +ML + P TF ++I
Sbjct: 303 ASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLIN 362
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL--------LHSGSDL 234
G + ALE+ ++ ++ A + L+ LH D+
Sbjct: 363 GYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDI 411
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 1/226 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KL + ++R L + A + + M+ DG PD ++S G +
Sbjct: 101 KLHMNHNYWTYNMLLRSLCETNHHRSAKLVYDWMRFDGQVPDSWLLGFLVSSYALIGRFD 160
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
EL ++ + +V YN N L +NK EA+ + +++L P T N L+
Sbjct: 161 VSKELLVDVQCNNVGVNVVVYNDLFNILIIKNKAREAVDLFWELVRLRYCPVTYTINILM 220
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM-LKKCF 181
LC AG++ +A ++ ++ G ++ TY ++ G +E+ A L E+ L
Sbjct: 221 RGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSFLNEVCLNGQV 280
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ++ II C+ + EA L +++ P A + AL+
Sbjct: 281 APDVVSYTTIISGYCKLSRMKEASSLFDEMIRSGTMPNAFTFNALI 326
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 96/188 (51%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
G+ P + ++S +V + K +FD M G++ DVYTY IN CK K+DEA
Sbjct: 205 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEA 264
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ + M + G PNVVT N L+ LC++G L +A M V +L TY I+++G
Sbjct: 265 VGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNG 324
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
LV + EA+ +L EM K F P F+ +I +KG +++AL + + K P
Sbjct: 325 LVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 384
Query: 220 ARAWEALL 227
A LL
Sbjct: 385 AVTHNTLL 392
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + M+ +R +A+ + N++ + ++ V Y I+++ G++ +
Sbjct: 591 GVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEA 650
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L D M + P ++TY+ I+G+C + V+EA I + M G PNV L+G
Sbjct: 651 FKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGG 710
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + + + +++EM ++ N TY IM+DG EA+ LL EM+ P
Sbjct: 711 YCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPD 770
Query: 185 SSTFDNIICCMCQKGLINEALE 206
+ T+ + C++ + E L+
Sbjct: 771 TVTYTVLQKGYCKENELEETLQ 792
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + ++I L K R +AL +M ++ + P +V Y I+++G+V + +
Sbjct: 275 GVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEA 334
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ + EM G P+ + +N I+G ++ +D+A+++ D M G KPN VT NTLL
Sbjct: 335 NSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQG 394
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C + +A+ V++ + + +N +L L ++ A +++ +L +
Sbjct: 395 FCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVN 454
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIV-AKSFAPGARAWEALL 227
S ++C +C+ G EA++L ++ K A ALL
Sbjct: 455 DSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALL 498
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K GF P + +++ L + + D +L++ K G+ P++ Y ++L G
Sbjct: 552 MMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADR 611
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
LF++++ + YN+ I K EA ++ D+M P + T ++
Sbjct: 612 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSS 671
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ +C + +AKG+ +EM +G+ N+ Y ++ G ++ + +L+EM C
Sbjct: 672 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 731
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
P T+ +I C+ G EA +L+ +++A +P + L
Sbjct: 732 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 777
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 6/212 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ LVK + + + M + G+ DV Y ++ G K+
Sbjct: 205 GVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGG---KI 261
Query: 65 DE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
DE LF +M G++P+V TYN I+GLCK +++EA+ M++ P++VT L
Sbjct: 262 DEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGIL 321
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ L + +A V+ EM KG N + ++DG K + +A + ++M K
Sbjct: 322 VNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGL 381
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
P + T + ++ C+ + +A ++++ +++
Sbjct: 382 KPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLS 413
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 24 ERG-MDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
ERG M+ ++ + +M + G+ D + Y ++ G G + +L ++M+ G PD Y
Sbjct: 503 ERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTY 562
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TYN + GL + K+D+ +++ G PN+ T +L C A + A + ++
Sbjct: 563 TYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKL 622
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
VEL+ Y I++ EA L + M +P T+ +II MC L+
Sbjct: 623 VYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLV 682
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
EA + +++ + P + AL+
Sbjct: 683 EEAKGIFEEMRNEGLMPNVFCYTALI 708
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
+ G+ + +L G+ G+ ++ + EM+ GL+ D +YN I G CK K++
Sbjct: 484 KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIE 543
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
EA ++ + M+K G KP+ T N L+ L + G + V+ E GV N++TY +ML
Sbjct: 544 EAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALML 603
Query: 158 DGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
+G I A L +++ ++ +I + G EA +L + + +
Sbjct: 604 EGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIH 663
Query: 218 PGARAWEALL 227
P + +++
Sbjct: 664 PTIFTYSSII 673
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 40/265 (15%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P F +I ++ DAL + + M G+KP+ V + +L G
Sbjct: 341 MYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQ 400
Query: 61 YVKLDELFDEML--VLGLIPDVYTYNVYINGLCKQNKVDEAIQIV-----------DSMI 107
+ +++ + +L VL + D +Y +++ LCK +K D A++IV DS++
Sbjct: 401 MEQAEQVLEYLLSNVLSVNEDACSYVLHL--LCKSSKFDSALKIVKALLLRNIKVNDSLL 458
Query: 108 KL-------------------------GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
L G N T N LL LCE G++ + V KEM
Sbjct: 459 TLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMV 518
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
+G+ L+ +Y ++ G +I EA L E+M+K+ F P + T++ ++ + KG ++
Sbjct: 519 ERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMD 578
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
+ ++ + P + +L
Sbjct: 579 DVGRVLHEAKDHGVVPNIYTYALML 603
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE--LFDEMLVLGLI-PDVYTYN 84
+A+ + +M + G+ P+VV Y ++ G+ G +L+E +F +V + P + TY
Sbjct: 263 EAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSG---RLEEALMFKGRMVENKVNPSLVTYG 319
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+ +NGL K K DEA ++ M G PN N L+ G++ A V +M LK
Sbjct: 320 ILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLK 379
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G++ N T+ +L G ++ +A +LE +L ++ +C+ + A
Sbjct: 380 GLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSA 439
Query: 205 LELMKKIVAKS 215
L+++K ++ ++
Sbjct: 440 LKIVKALLLRN 450
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR P + ++ +I + + +A I +M+ +G+ P+V CYT ++ G G
Sbjct: 657 MRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQ 716
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+++ + EM + P+ TY + I+G CK EA ++++ MI G P+ VT
Sbjct: 717 MDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTV 776
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
L C+ +L + G V L TY ++D L
Sbjct: 777 LQKGYCKENELEETL-----QGDTAVPLEEITYTTLVDKL 811
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P + F M V +A ++ +M++ G++P+ +T++++G EG
Sbjct: 241 MPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQ 300
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + + LG P++ +NV ING + D +++ M + +P+VVT +T
Sbjct: 301 IKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEVLRLMKEFQIQPDVVTYST 360
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ A +AG K K + M GV+ ++H Y I++ G V E +A LL +M++
Sbjct: 361 IMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESG 420
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF N+I G ++ A+++ K+ +P R +EAL+
Sbjct: 421 VRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALI 467
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 4/216 (1%)
Query: 1 MRKLGFCPGVMDFTDMIR-FLVKEER-GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
++ LGF P ++ F +I F+ + +R G+D +L MK+ I+PDVV Y+ +++
Sbjct: 311 IKDLGFKPNLLVFNVLINGFVDRMDRDGVDE--VLRLMKEFQIQPDVVTYSTIMNAWSQA 368
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G K ++FD ML G+ PDV+ Y++ + G + + ++A +++ MI+ G +PNVVT
Sbjct: 369 GFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTF 428
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ +G + A + +M GV NL T+ ++ G + ++ +L+ M +
Sbjct: 429 TNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEILQLMEE 488
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+P+ STF + GL EA+ L AK
Sbjct: 489 FHVHPKKSTFLLVSKAWRFAGLTEEAIRLRSISRAK 524
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 1/215 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +T ++ L ++ +++Q+++ +K + + Y V++ G+
Sbjct: 104 GHQPSLITYTSLLHALTMQKCFKSIHSLVSQVEEKQMKTNSIFYNAVINAFAESGNMEDA 163
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLG 123
+ +M G P TY+ I G K EA++++D M+ G KP++ T N L+
Sbjct: 164 KKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIK 223
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC++G++S+A ++ +M G+ + T+ M G V +E EA ++ EM +K P
Sbjct: 224 ALCQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEP 283
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
TF I+ ++G I EAL+ + +I F P
Sbjct: 284 NERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKP 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 45 VVC-YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
VVC T +L+ ++ G + +F +++ G P + TY ++ L Q +V
Sbjct: 73 VVCSRTKLLNILIVCGKPQAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLV 132
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG--LV 161
+ + K N + N ++ A E+G++ AK +++M G + TY ++ G +V
Sbjct: 133 SQVEEKQMKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIV 192
Query: 162 GKAEIGEASLLLEEMLKK-CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
GK+ GEA LL+ ML P T++ +I +CQ G ++EA ++ K+ A P +
Sbjct: 193 GKS--GEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDS 250
Query: 221 RAWEALLL 228
+ + +
Sbjct: 251 VTFNTMAI 258
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M L P V++F ++ LVK + + + Q++ +GIKP++V +I+++ G
Sbjct: 36 MLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQ 95
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++L +G P+ T + G C +KV EA+ D ++ LG N V+ T
Sbjct: 96 MRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGT 155
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G+ A +++++ K V N+ Y ++DGL + +A L EM+ K
Sbjct: 156 LINGLCKIGETRAALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYELYSEMITKR 215
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T +++I C G EA L++++V K+ P + L+
Sbjct: 216 ISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILV 262
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 114/225 (50%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+G+ P + T +++ + +AL+ + + G + V Y +++G+ G+
Sbjct: 108 KMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETR 167
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
++ ++ + +V Y+ I+GLCK V++A ++ MI P VVT N+L+
Sbjct: 168 AALQMLRQIEGKLVRTNVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLI 227
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C G +A G+++EM LK + +++T+ I++D L + +I EA + M+K+
Sbjct: 228 YGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVM 287
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +++ C +N+A ++ I AP AR++ ++
Sbjct: 288 PDVVTYSSLMDGYCLVNEVNKAKHVLSIISRMRVAPNARSYSIVI 332
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ ++ +I L K++ DA + ++M I P VV ++ G G + + L
Sbjct: 184 NVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLL 243
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
EM++ + PDVYT+N+ ++ LCK+ K+ EA + M+K G P+VVT ++L+ C
Sbjct: 244 REMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLV 303
Query: 129 GDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+++KAK V+ + V N +Y I+++G
Sbjct: 304 NEVNKAKHVLSIISRMRVAPNARSYSIVINGF 335
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 64/147 (43%)
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F ML+L P V + ++ L K I + + G KPN+V+ + L+ C
Sbjct: 33 FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 92
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + A + ++ G N T ++ G ++ EA + +L F+ +
Sbjct: 93 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 152
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ +I +C+ G AL+++++I K
Sbjct: 153 YGTLINGLCKIGETRAALQMLRQIEGK 179
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 106/196 (54%), Gaps = 2/196 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ ++M+ G P++V + +++G +G +K EL + +L L PD++T++ I+GLC
Sbjct: 438 VFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLC 497
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ + +EA + + M++ G PN + N L+ +LC G+ +++ +++ M +G+ +++
Sbjct: 498 RLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIY 557
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+Y ++ ++ +A L + M K F P + T+ I + + G + EA ++ +
Sbjct: 558 SYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSM 617
Query: 212 VAKSFAPGA--RAWEA 225
A +P + R EA
Sbjct: 618 EANGCSPDSYDRVEEA 633
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 114/223 (51%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ P F ++ LVK +A I + G+KP + Y + + + +
Sbjct: 341 GYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDEG 400
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D++ D+M+ GLI +V +YN+ I+ CK + +D+A ++ M G PN+VT NTL+
Sbjct: 401 DQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLING 460
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ G + KA+ +++ + ++ ++ T+ ++DGL EA EM++ P
Sbjct: 461 HCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPN 520
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ +I +C G +++L++++ + +P ++ AL+
Sbjct: 521 AIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALI 563
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
R+ FC G + ++ L + + + + G PD + ++++ +V +
Sbjct: 303 REEDFCSGKLACDTVLYCLANNSMAKEMVVFIRKALARGYVPDSSVFNVIMACLVKRAEL 362
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ E+F+ G+ P + TY L K + DE QI D M+ G NVV+ N L
Sbjct: 363 REACEIFEIFTKRGVKPGIGTYLTLAEALYKDEQRDEGDQISDQMVSDGLISNVVSYNML 422
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C+ + KA V EM L+G NL T+ +++G I +A LLE +L+
Sbjct: 423 IDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRL 482
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF II +C+ EA E ++V P A + L+
Sbjct: 483 KPDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILI 528
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 6/220 (2%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LG P + +I LVK A QM D PD + Y +++ G+ G +
Sbjct: 163 LGISPTTRLYNSLIDALVKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVCKIGVVDE 222
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L +M GL P+V+TY + I+G C +VDEA ++D M + N T TL+
Sbjct: 223 ALRLIRQMKDKGLFPNVFTYTILIDGFCNAKRVDEAFGVLDMMKESRVCANEATIRTLVH 282
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG----LVGKAEIGEASLLLEEMLKK 179
+ D SKA ++ E + E + + ++ D L + E + + + L +
Sbjct: 283 GVFRCVDPSKAFVLLSEFLDR--EEDFCSGKLACDTVLYCLANNSMAKEMVVFIRKALAR 340
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+ P SS F+ I+ C+ ++ + EA E+ + + PG
Sbjct: 341 GYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPG 380
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ Q+ GI P Y ++ +V F +M+ PD TYNV I+G+C
Sbjct: 156 VFGQISFLGISPTTRLYNSLIDALVKSNSIDLAYSKFQQMVGDHCFPDRITYNVLIHGVC 215
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K VDEA++++ M G PNV T L+ C A + +A GV+ M V N
Sbjct: 216 KIGVVDEALRLIRQMKDKGLFPNVFTYTILIDGFCNAKRVDEAFGVLDMMKESRVCANEA 275
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKK--CFYPRSSTFDNIICCMCQKGLINEALELMK 209
T R ++ G+ + +A +LL E L + F D ++ C+ + E + ++
Sbjct: 276 TIRTLVHGVFRCVDPSKAFVLLSEFLDREEDFCSGKLACDTVLYCLANNSMAKEMVVFIR 335
Query: 210 KIVAKSFAPGARAWEALL 227
K +A+ + P + + ++
Sbjct: 336 KALARGYVPDSSVFNVIM 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 82/176 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P ++ F +I K+ + A +L + ++ +KPD+ ++ ++ G+
Sbjct: 442 MQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLCRLKR 501
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E F+EM+ G+ P+ YN+ I LC + +++++ M + G P++ + N
Sbjct: 502 TEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNA 561
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ C + KAK + M G + +TY + L + EA + M
Sbjct: 562 LIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSM 617
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + +IR L ++ +L +M+++GI PD+ Y ++
Sbjct: 512 MVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNK 571
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +LFD M G PD YTY+ +I L + +++EA ++ SM GC P+
Sbjct: 572 VEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSMEANGCSPD------ 625
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELN 149
+ +A+ +++ KG+ LN
Sbjct: 626 ------SYDRVEEAQKIVERCRQKGIALN 648
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I K+ +AL + ++M+++GI D+V Y ++ G EG +
Sbjct: 230 GVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREA 289
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+F E + IP+ TY I+G CK N+ +EA+++ + M+ G P VVT N++L
Sbjct: 290 MRMFGE--IKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRK 347
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
LC G + A ++ EM + V+ + T +++ ++ A +ML+ P
Sbjct: 348 LCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPN 407
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
S T+ +I C+ + A EL+ ++ F+P R + ++
Sbjct: 408 SFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I K A +ILN+M+ G+ PD+ Y +++ +G + +
Sbjct: 195 GVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEA 254
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ D+M G+ D+ +YN I G CK+ K+ EA+++ + PN VT TL+
Sbjct: 255 LSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDG 312
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+A + +A + + M KG+ + TY +L L I +A+ LL EM ++
Sbjct: 313 YCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQAD 372
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
S T + +I C+ G +N AL+ K++ P + ++AL+
Sbjct: 373 SVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALI 415
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 2/212 (0%)
Query: 22 KEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVY 81
K + DA+ + QM +KP + T++++ ++ +G + +++ M+ G++P++Y
Sbjct: 142 KSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIY 201
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
YN I+ K V+ A I++ M G P++ T NTL+ C+ G +A V +M
Sbjct: 202 VYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKM 261
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
+G+ L++ +Y ++ G + ++ EA + E+ K P T+ +I C+
Sbjct: 262 EREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEF 319
Query: 202 NEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
EAL L + +VAK PG + ++L SD
Sbjct: 320 EEALRLREMMVAKGLYPGVVTYNSILRKLCSD 351
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G PGV+ + ++R L + R DA +L++M + ++ D V +++ GD
Sbjct: 333 GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSA 392
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ +ML GL P+ +TY I+G CK ++++ A +++ M+ G PN T + ++ +
Sbjct: 393 LKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDS 452
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ + + E KG LN+ YR ++ L I A LL M K
Sbjct: 453 YCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGISGD 512
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAK 214
S + ++ + G N A ++++++ +
Sbjct: 513 SVIYTSLAFSYWKSGNTNAASDMLEEMARR 542
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +T +I K +AL + M G+ P VV Y +L + ++G ++L
Sbjct: 301 PNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKL 360
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM + D T N IN CK ++ A++ M++ G PN T L+ C+
Sbjct: 361 LHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCK 420
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+L AK ++ M G N TY ++D K L +E L K F S
Sbjct: 421 TSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISL 480
Query: 188 FDNIICCMCQKGLINEALELMKKIVAK 214
+ +I +C+ I A +L+ + K
Sbjct: 481 YRALIRRLCKIERIECAEKLLYHMEGK 507
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 36/256 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ + K R A+ N+MK G+K + V YT ++S + K +
Sbjct: 348 PNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQY 407
Query: 68 FDEMLVLGLIPDV-----------------------------------YTYNVYINGLCK 92
FDEML G PD + YNV I+G CK
Sbjct: 408 FDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCK 467
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
+ K++ ++++ M + G KP++VT NTL+ L +AGD + A VMK+M +G++ ++ T
Sbjct: 468 KKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVT 527
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI-ICCMCQKGLINEALELMKKI 211
Y ++ K I EA + EM P ++ NI I +C+ + A+ LM +
Sbjct: 528 YGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDM 587
Query: 212 VAKSFAPGARAWEALL 227
K P + A+
Sbjct: 588 KVKGVQPNTTTYNAIF 603
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + +I L R DA +++Q+K+ G D CY +++SG + ++
Sbjct: 415 GCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERV 474
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ +EM G+ PD+ TYN ++ L K A +++ MIK G KP+VVT ++ A
Sbjct: 475 YEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHA 534
Query: 125 LCEAGDLSKAKGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C ++ +A + EM V N Y I++D L ++ A L+++M K P
Sbjct: 535 YCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQP 594
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
++T++ I + K ++++A ELM ++V + P E L
Sbjct: 595 NTTTYNAIFKGVQDKRMLHKAFELMDRMVEDACNPDYVTMEIL 637
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M ++ I+P+VV ++ G+ G E F+EM GL + TY I+ C N
Sbjct: 341 MNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNN 400
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+D+A+Q D M+ GC P+ + L+ L AG + A V+ ++ G L+ H Y +
Sbjct: 401 IDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNV 460
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++ G K ++ +L EM + P T++ ++ + + G A ++MKK++ +
Sbjct: 461 LISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEG 520
Query: 216 FAPGARAWEALL 227
P + A++
Sbjct: 521 LKPSVVTYGAVI 532
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 8/231 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P T +I L + A +L+ + + G + +L+G+ E D K+
Sbjct: 162 GVFPDTFKLTQLISKLCGNRKNGVAWELLHAVIKLGGTVEAASCNALLTGLGRERDIHKM 221
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-------LGCKPNVVT 117
+EL EM + + P V T+ + IN CK ++DEA+ + D + +G +P+VV
Sbjct: 222 NELLAEMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGREKKWIGVEPDVVL 281
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
NTL+ LC+ G + +++EM K + N TY ++DG I +A L M
Sbjct: 282 YNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNIDKARELFGLM 341
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ P T + ++ MC+ G + A+E ++ K A + AL+
Sbjct: 342 NEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALI 392
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 1/238 (0%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYV 62
+G P V+ + +I L K R + L +L +MK + KP+ + Y ++ G G+
Sbjct: 273 IGVEPDVVLYNTLINGLCKVGREEEGLNLLEEMKTEKKNKPNTITYNCLIDGFCKAGNID 332
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K ELF M + P+V T N ++G+CK +V A++ + M G K N VT L+
Sbjct: 333 KARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALI 392
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A C ++ KA EM G + Y ++ GL +G+AS+++ ++ + F
Sbjct: 393 SAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFG 452
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
++ +I C+K + E++ ++ P + L+ + G ++ T
Sbjct: 453 LDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATAT 510
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ + ++ +L K A ++ +M ++G+KP VV Y V+ + +
Sbjct: 481 MEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKN 540
Query: 61 YVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++F EM ++P + YN+ I+ LCK N V+ A+ ++D M G +PN T N
Sbjct: 541 IDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYN 600
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
+ + + L KA +M M + T I+ + L EI + L ++
Sbjct: 601 AIFKGVQDKRMLHKAFELMDRMVEDACNPDYVTMEILTEWLSAIGEIEKLKLFVK 655
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 20 LVKEERGMDALYILNQMKQD--GIKPDVVCYTIVLSGIVAEGDYVKLDE----LFDEMLV 73
L+K R DA +L+Q+ Q G PD +G + G+ VK D DE +V
Sbjct: 99 LLKSGRIDDARQVLDQLLQPDTGFPPDD------FTGQIVFGELVKRDRPGKGFADEEIV 152
Query: 74 --------LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
G+ PD + I+ LC K A +++ ++IKLG +CN LL L
Sbjct: 153 GLVTKLCEYGVFPDTFKLTQLISKLCGNRKNGVAWELLHAVIKLGGTVEAASCNALLTGL 212
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
D+ K ++ EM + ++ T+ I+++ I EA
Sbjct: 213 GRERDIHKMNELLAEMEEMKIHPSVITFGILINQFCKSRRIDEA 256
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ GF P + + ++ K R +AL +L M+ +G P ++ Y ++S V G
Sbjct: 338 IKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGW 397
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L +M+ G+ PDV+TY ++G K K + A ++ D M GCKPN+ T N
Sbjct: 398 LEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNA 457
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKK 179
L+ G + V +E+ G ++ T+ +L + G ++ E + + +EM +
Sbjct: 458 LIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLL-AVFGHNQMDSEVAGVFKEMKRS 516
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P TF+ +I + G ++A+ + K ++ +P + A+L
Sbjct: 517 GFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVL 564
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P ++ + +I V+ +A + QM + GIKPDV YT +LSG G
Sbjct: 373 MESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGK 432
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++DEM G P++ T+N I + E +++ + + + GC P++VT NT
Sbjct: 433 DEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNT 492
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL S+ GV KEM G T+ ++ +A + + ML+
Sbjct: 493 LLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESG 552
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ST++ ++ + + G ++ +++ ++ P + +LL
Sbjct: 553 VSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLL 599
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG-DYVK 63
GF V +T +I + R DA+ + N+M++DG P +V Y +L+ G + +
Sbjct: 236 GFEIDVYAYTCLITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVYGKMGMSWSR 295
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ +FD M G++PD+YTYN I + + +E + + D + G P+ VT N LL
Sbjct: 296 VTAIFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLD 355
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+A +A V+K+M G + TY ++ V + EAS L +M++K P
Sbjct: 356 VFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKP 415
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
T+ ++ + G A E+ ++ A P + AL+ G+
Sbjct: 416 DVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGN 464
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I + MK +G+ PD+ Y +++ Y ++ +FD++ G +PD TYN ++
Sbjct: 299 IFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFA 358
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K + EA+Q++ M G P ++T N+L+ A G L +A + +M KG++ ++
Sbjct: 359 KARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVF 418
Query: 152 TYRIMLDGL--VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
TY +L G GK E A + +EM P TF+ +I +G+ E +++ +
Sbjct: 419 TYTTLLSGFEKAGKDEF--AFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFE 476
Query: 210 KIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
+I +P W LL G + SE AG+F +
Sbjct: 477 EIKECGCSPDIVTWNTLLAVFGHNQMDSEV--AGVFKE 512
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P + + ++ + ++ + IL ++ + G+KPD V Y V+ G
Sbjct: 688 MYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGR 747
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F EM L+P+V TYN ++ + EAI ++ MIK GC+P+ T N+
Sbjct: 748 MKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNS 807
Query: 121 LLGALCEAGDLSKAKGVMKEMG 142
++ C+ +A +K +G
Sbjct: 808 IIDWYCKHNRQDEANSFVKNLG 829
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++ L K R A +L ++ DG + DV YT +++ ++G Y +F++M G
Sbjct: 212 IVNILGKAGRVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNKMQRDG 271
Query: 76 LIPDVYTYNVYINGLCKQN-KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL-SK 133
P + TYN +N K I DSM G P++ T NTL+ C G L +
Sbjct: 272 CTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTNGVVPDLYTYNTLI-TCCRRGSLYEE 330
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
V ++ G + TY +LD EA +L++M F P T++++I
Sbjct: 331 VVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLIS 390
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G + EA L ++V K P + LL
Sbjct: 391 AHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLL 424
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G PG+ MI +++ A ILN M ++G P + Y ++
Sbjct: 653 LKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDK 712
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K +E+ E+L G+ PD +YN I C+ ++ EA+++ M PNVVT NT
Sbjct: 713 FQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNT 772
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ +A V++ M +G + +TY ++D EA+ ++ +
Sbjct: 773 FVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 40/271 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M+ G P + F +I+ + RGM + + + ++K+ G PD+V + +L+
Sbjct: 443 MKAAGCKPNICTFNALIK--MHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHN 500
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
++ +F EM G +P+ T+N I+ + D+A+ + SM++ G P++ T
Sbjct: 501 QMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTY 560
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI------------ 166
N +L AL G +++ ++ EM N TY +L EI
Sbjct: 561 NAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYS 620
Query: 167 -----------------GEASLLLE------EMLKKCFYPRSSTFDNIICCMCQKGLINE 203
++ LL+E E+ ++ P +T + +I +K ++++
Sbjct: 621 GSIETHPVLLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSK 680
Query: 204 ALELMKKIVAKSFAPGARAWEALL-LHSGSD 233
A E++ + F P + +L+ ++S SD
Sbjct: 681 ANEILNFMYENGFTPSLTTYNSLMYMYSRSD 711
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
++K+ GI P + ++S + K +E+ + M G P + TYN + + +
Sbjct: 652 ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSD 711
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K ++ +I+ ++K G KP+ V+ NT++ A C G + +A + EM + N+ TY
Sbjct: 712 KFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYN 771
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+ + EA ++ M+K+ P +T+++II C+ +EA +K +
Sbjct: 772 TFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 105/273 (38%), Gaps = 35/273 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ GF P F +I + A+ + M + G+ PD+ Y VL+ + G
Sbjct: 513 MKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGF 572
Query: 61 YVKLDELFDEMLVLGLIPDVYTY----NVYING--------------------------- 89
+ + +++ EM P+ TY + Y NG
Sbjct: 573 WEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHPVLLKT 632
Query: 90 -LCKQNKVDEAIQIVDSMIKL---GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+ +K D ++ + +L G P + T N ++ +SKA ++ M G
Sbjct: 633 LVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENG 692
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+L TY ++ + ++ +L E+LKK P +++ +I C+ G + EAL
Sbjct: 693 FTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEAL 752
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+ ++ + P + + +D + E
Sbjct: 753 RMFSEMKDSALVPNVVTYNTFVATYAADSMFVE 785
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 79/166 (47%)
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
++ + F E+ G+ P + T N I+ ++ V +A +I++ M + G P++ T N+L
Sbjct: 644 METERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSL 703
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + K++ +++E+ KG++ + +Y ++ + EA + EM
Sbjct: 704 MYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSAL 763
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ + + EA+++++ ++ + P + +++
Sbjct: 764 VPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSII 809
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++ GF P + + ++ K R +AL +L M+ +G P ++ Y ++S V G
Sbjct: 338 IKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGW 397
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L +M+ G+ PDV+TY ++G K K + A ++ D M GCKPN+ T N
Sbjct: 398 LEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNA 457
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKK 179
L+ G + V +E+ G ++ T+ +L + G ++ E + + +EM +
Sbjct: 458 LIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLL-AVFGHNQMDSEVAGVFKEMKRS 516
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F P TF+ +I + G ++A+ + K ++ +P + A+L
Sbjct: 517 GFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVL 564
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P ++ + +I V+ +A + QM + GIKPDV YT +LSG G
Sbjct: 373 MESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGK 432
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++DEM G P++ T+N I + E +++ + + + GC P++VT NT
Sbjct: 433 DEFAFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNT 492
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL S+ GV KEM G T+ ++ +A + + ML+
Sbjct: 493 LLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESG 552
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P ST++ ++ + + G ++ +++ ++ P + +LL
Sbjct: 553 VSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLL 599
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG-DYVK 63
GF V +T +I + R DA+ + N+M++DG P +V Y +L+ G + +
Sbjct: 236 GFEIDVYAYTCLITAYASKGRYNDAVSVFNKMQRDGCTPTLVTYNSILNVYGKMGMSWSR 295
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ +FD M G++PD+YTYN I + + +E + + D + G P+ VT N LL
Sbjct: 296 VTAIFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLD 355
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+A +A V+K+M G + TY ++ V + EAS L +M++K P
Sbjct: 356 VFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKP 415
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
T+ ++ + G A E+ ++ A P + AL+ G+
Sbjct: 416 DVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNALIKMHGN 464
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I + MK +G+ PD+ Y +++ Y ++ +FD++ G +PD TYN ++
Sbjct: 299 IFDSMKTNGVVPDLYTYNTLITCCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFA 358
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K + EA+Q++ M G P ++T N+L+ A G L +A + +M KG++ ++
Sbjct: 359 KARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVF 418
Query: 152 TYRIMLDGL--VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
TY +L G GK E A + +EM P TF+ +I +G+ E +++ +
Sbjct: 419 TYTTLLSGFEKAGKDEF--AFEVYDEMKAAGCKPNICTFNALIKMHGNRGMFVEMMKVFE 476
Query: 210 KIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
+I +P W LL G + SE AG+F +
Sbjct: 477 EIKECGCSPDIVTWNTLLAVFGHNQMDSEV--AGVFKE 512
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P + + ++ + ++ + IL ++ + G+KPD V Y V+ G
Sbjct: 688 MYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGR 747
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F EM L+P+V TYN ++ + EAI ++ MIK GC+P+ T N+
Sbjct: 748 MKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNS 807
Query: 121 LLGALCEAGDLSKAKGVMKEMG 142
++ C+ +A +K +G
Sbjct: 808 IIDWYCKHNRQDEANSFVKNLG 829
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 3/214 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++ L K R A +L ++ DG + DV YT +++ ++G Y +F++M G
Sbjct: 212 IVNILGKAGRVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNKMQRDG 271
Query: 76 LIPDVYTYNVYINGLCKQN-KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL-SK 133
P + TYN +N K I DSM G P++ T NTL+ C G L +
Sbjct: 272 CTPTLVTYNSILNVYGKMGMSWSRVTAIFDSMKTNGVVPDLYTYNTLI-TCCRRGSLYEE 330
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
V ++ G + TY +LD EA +L++M F P T++++I
Sbjct: 331 VVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLIS 390
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G + EA L ++V K P + LL
Sbjct: 391 AHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLL 424
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+++ G PG+ MI +++ A ILN M ++G P + Y ++
Sbjct: 653 LKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDK 712
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K +E+ E+L G+ PD +YN I C+ ++ EA+++ M PNVVT NT
Sbjct: 713 FQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNT 772
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ +A V++ M +G + +TY ++D EA+ ++ +
Sbjct: 773 FVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 40/271 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M+ G P + F +I+ + RGM + + + ++K+ G PD+V + +L+
Sbjct: 443 MKAAGCKPNICTFNALIK--MHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHN 500
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
++ +F EM G +P+ T+N I+ + D+A+ + SM++ G P++ T
Sbjct: 501 QMDSEVAGVFKEMKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTY 560
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI------------ 166
N +L AL G +++ ++ EM N TY +L EI
Sbjct: 561 NAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYS 620
Query: 167 -----------------GEASLLLE------EMLKKCFYPRSSTFDNIICCMCQKGLINE 203
++ LL+E E+ ++ P +T + +I +K ++++
Sbjct: 621 GSIETHPVLLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSK 680
Query: 204 ALELMKKIVAKSFAPGARAWEALL-LHSGSD 233
A E++ + F P + +L+ ++S SD
Sbjct: 681 ANEILNFMYENGFTPSLTTYNSLMYMYSRSD 711
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
++K+ GI P + ++S + K +E+ + M G P + TYN + + +
Sbjct: 652 ELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSD 711
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
K ++ +I+ ++K G KP+ V+ NT++ A C G + +A + EM + N+ TY
Sbjct: 712 KFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYN 771
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+ + EA ++ M+K+ P +T+++II C+ +EA +K +
Sbjct: 772 TFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSIIDWYCKHNRQDEANSFVKNL 828
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 105/273 (38%), Gaps = 35/273 (12%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ GF P F +I + A+ + M + G+ PD+ Y VL+ + G
Sbjct: 513 MKRSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGF 572
Query: 61 YVKLDELFDEMLVLGLIPDVYTY----NVYING--------------------------- 89
+ + +++ EM P+ TY + Y NG
Sbjct: 573 WEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHPVLLKT 632
Query: 90 -LCKQNKVDEAIQIVDSMIKL---GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
+ +K D ++ + +L G P + T N ++ +SKA ++ M G
Sbjct: 633 LVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENG 692
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+L TY ++ + ++ +L E+LKK P +++ +I C+ G + EAL
Sbjct: 693 FTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEAL 752
Query: 206 ELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+ ++ + P + + +D + E
Sbjct: 753 RMFSEMKDSALVPNVVTYNTFVATYAADSMFVE 785
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 79/166 (47%)
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
++ + F E+ G+ P + T N I+ ++ V +A +I++ M + G P++ T N+L
Sbjct: 644 METERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSL 703
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + K++ +++E+ KG++ + +Y ++ + EA + EM
Sbjct: 704 MYMYSRSDKFQKSEEILREVLKKGMKPDKVSYNTVIYAYCRNGRMKEALRMFSEMKDSAL 763
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ + + EA+++++ ++ + P + +++
Sbjct: 764 VPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQNTYNSII 809
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 13 FTDMIRFLVKEERGMDAL-YILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
F +I L KE +A Y+L + + D G P + Y I+L+G + L++E
Sbjct: 220 FEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEE 279
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M + P V TY + G C+ +V++A+++V M K G KPN + N ++ AL EAG
Sbjct: 280 MKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGR 339
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+A G+M+ + + L TY ++ G +I AS +L++M+ + F P +T++
Sbjct: 340 FKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNY 399
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAP 218
+ G ++E + L K++ P
Sbjct: 400 FFRYFSRCGKVDEGMNLYTKMIESGHNP 427
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + + +I L + R +AL ++ + I P + Y ++ G GD
Sbjct: 315 MTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGD 374
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +M+ G +P TYN + + KVDE + + MI+ G P+ +T +
Sbjct: 375 IEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHL 434
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L LCE L A V EM KG +++L T ++ L ++ EA E+M+++
Sbjct: 435 VLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRG 494
Query: 181 FYPRSSTFDNIICCMCQKGLINEALEL 207
P+ TF + + ++G+ A +L
Sbjct: 495 IIPQYLTFQKLNVELKKQGMNEMARKL 521
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LG+ P + + M+ + + A + +MK + ++P VV Y ++ G K
Sbjct: 248 LGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEK 307
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
E+ EM G+ P+ YN I+ L + + EA+ +++ L P + T N+L+
Sbjct: 308 ALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVK 367
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C+AGD+ A ++K+M +G TY ++ E L +M++ P
Sbjct: 368 GFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNP 427
Query: 184 RSSTFDNIICCMCQKGLINEALEL 207
T+ ++ +C++ E LEL
Sbjct: 428 DRLTYHLVLKMLCEE----EKLEL 447
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 30/248 (12%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I + DA+ N+M + I P+V +TI++ G EG + +
Sbjct: 8 PNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGRVKEAKNV 67
Query: 68 FDEMLVLGLIPDVYTYNVYING---------------------------LCKQNKVDEAI 100
M+ G+ PDV TYN ++G LCK +V A+
Sbjct: 68 LAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKKCIANKFFRSTLIDVLCKSRRVSYAL 127
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
++VD M G +P+++T N++L ALC+ KA ++ ++ +G+ N++TY I++ GL
Sbjct: 128 ELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVKGL 187
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ +A + E++ + + +I C KGL +E L L+ K+ P A
Sbjct: 188 CRSGKLEDARKVFEDL---GYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIPDA 244
Query: 221 RAWEALLL 228
+ +E ++L
Sbjct: 245 KTYEIIIL 252
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 59/231 (25%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG--IVAEGDYVKLD 65
P V FT ++ KE R +A +L M + GIKPDVV Y ++ G IV E + K
Sbjct: 43 PNVYTFTILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAKKK 102
Query: 66 -------------------------ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
EL DEM G PD+ TYN ++ LCK++ +AI
Sbjct: 103 CIANKFFRSTLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAI 162
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG------------------ 142
++ + G +PN+ T L+ LC +G L A+ V +++G
Sbjct: 163 ALLTKLKDQGIRPNMNTYTILVKGLCRSGKLEDARKVFEDLGYNLDVYAYTVMIQGFCDK 222
Query: 143 ---------LKGVELN-----LHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L +E N TY I++ L K E A LL EM+ +
Sbjct: 223 GLFDEVLALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K+ A+ +L ++K GI+P++ YTI++ G+ G
Sbjct: 133 MHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQGIRPNMNTYTILVKGLCRSGK 192
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++F++ LG DVY Y V I G C + DE + ++ M + GC P+ T
Sbjct: 193 LEDARKVFED---LGYNLDVYAYTVMIQGFCDKGLFDEVLALLSKMEENGCIPDAKTYEI 249
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L E + A+ +++EM ++G+
Sbjct: 250 IILSLFEKDENDMAEKLLREMIMRGL 275
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M+ PNVVT + L+ C G L A +M + + N++T+ I++DG +
Sbjct: 1 MVSRRTSPNVVTYSALISGFCIVGKLRDAIDFFNKMIFENINPNVYTFTILVDGFCKEGR 60
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ EA +L M+K+ P T+++++ C ++ E + KK +A F
Sbjct: 61 VKEAKNVLAMMMKQGIKPDVVTYNSLMDGYC---IVKEVNKAKKKCIANKF 108
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 100/185 (54%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M+ G P++V + I+++G +G +K E + +L L PD++T++ I+GLC+ +
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKR 60
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+EA + + M++ G PN + N L+ +LC G+ +++ +++ M +G+ ++++Y
Sbjct: 61 TEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNA 120
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++ ++ +A L + M K F P + T+ I + + G + EA ++ I A
Sbjct: 121 LIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSIEANG 180
Query: 216 FAPGA 220
+P +
Sbjct: 181 CSPDS 185
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 90/172 (52%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + F+ +I L + +R +A N+M + G+ P+ + Y I++ + + G+ + +L
Sbjct: 43 PDIFTFSCIIDGLCRLKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKL 102
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M G+ PD+Y+YN I C+ NKV++A ++ DSM K G P+ T + + AL E
Sbjct: 103 LRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSE 162
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+G L +AK + + G + + +++ LV + EA ++E +K
Sbjct: 163 SGRLEEAKKMFYSIEANGCSPDSYVCNLVIKALVRHDRVEEAQKIVERCRQK 214
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P ++ F +I K+ + A L + ++ +KPD+ ++ ++ G+
Sbjct: 1 MQLRGFTPNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKR 60
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ E F+EM+ G+ P+ YN+ I LC + +++++ M + G P++ + N
Sbjct: 61 TEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNA 120
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C + KAK + M G + +TY + L + EA KK
Sbjct: 121 LIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEA--------KKM 172
Query: 181 FYPRSS---TFDNIICCMCQKGLI-NEALELMKKIVAKSFAPG 219
FY + + D+ +C + K L+ ++ +E +KIV + G
Sbjct: 173 FYSIEANGCSPDSYVCNLVIKALVRHDRVEEAQKIVERCRQKG 215
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + + +IR L ++ +L +M+++GI PD+ Y ++
Sbjct: 71 MVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNK 130
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +LFD M G PD YTY+ +I L + +++EA ++ S+ GC P+ CN
Sbjct: 131 VEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSIEANGCSPDSYVCNL 190
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELN 149
++ AL + +A+ +++ KG+ LN
Sbjct: 191 VIKALVRHDRVEEAQKIVERCRQKGIALN 219
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 94/161 (58%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
LF+EM +IPDV TY+ I+G CK K+ A+ +V+ M G P+++ N++L ALC
Sbjct: 17 LFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRGQPPDIIIYNSILDALC 76
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + KA ++ + +G++ +++TY I++DGL + +A + +++L K + +
Sbjct: 77 KNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDARNIFKDLLVKGYNITVN 136
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T+ ++I +C GL +EAL L+ ++ S P +E ++
Sbjct: 137 TYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVVTYEIII 177
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
MI K +R +A+ + +M+ I PDVV Y+ ++ G L +EM G
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRG 60
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
PD+ YN ++ LCK ++VD+AI ++ G +P+V T L+ LC+ L A+
Sbjct: 61 QPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLEDAR 120
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ K++ +KG + ++TY M+ GL EA LL EM P T++ II +
Sbjct: 121 NIFKDLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVVTYEIIIRSL 180
Query: 196 CQKGLINEALELMKKIVAKSF 216
K ++A +++++++ +
Sbjct: 181 FDKDENDKAEKIIREMITRDL 201
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ +I K E+ AL ++N+M G PD++ Y +L + K L
Sbjct: 28 PDVVTYSSLIDGFCKSEKISHALNLVNEMHDRGQPPDIIIYNSILDALCKNHQVDKAIAL 87
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+ G+ P VYTY + I+GLCK ++++A I ++ G V T ++ LC
Sbjct: 88 LTKFKNQGIQPSVYTYTILIDGLCKGERLEDARNIFKDLLVKGYNITVNTYTDMIHGLCN 147
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
G +A ++ EM N+ TY I++ L K E +A ++ EM+ +
Sbjct: 148 MGLFDEALALLLEMKDNSCIPNVVTYEIIIRSLFDKDENDKAEKIIREMITR 199
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K + A+ +L + K GI+P V YTI++ G+
Sbjct: 56 MHDRGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGER 115
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+F ++LV G V TY I+GLC DEA+ ++ M C PNVVT
Sbjct: 116 LEDARNIFKDLLVKGYNITVNTYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVVTYEI 175
Query: 121 LLGALCEAGDLSKAKGVMKEM 141
++ +L + + KA+ +++EM
Sbjct: 176 IIRSLFDKDENDKAEKIIREM 196
>Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:51916-50064 | 20130731
Length = 381
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 113/229 (49%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERG--MDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M ++ P +++F ++ LVK A+ + +Q++ +GI PD+V +I+++
Sbjct: 121 MIRMNPTPSIIEFNKILGSLVKSNNNHYTTAISLFHQLEFNGIIPDIVTLSILINCYCHL 180
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G +F +L +G P+ T N + G+C KV EA+ D +I LG N VT
Sbjct: 181 GQMNFAFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTY 240
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
TL+ LC+ G ++A V++++ K V ++ Y ++D L + + EA L +M+
Sbjct: 241 GTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTEAYELYSQMIV 300
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K F P T ++I C G + +A L +++ + P + L+
Sbjct: 301 KKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILV 349
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 92/188 (48%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A I + + G +P+ V ++ G+ G + D ++ LG + TY IN
Sbjct: 186 AFSIFGNILKMGFQPNTVTLNTLVKGMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLIN 245
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK K EA+Q++ + +VV +T++ +LC+ +++A + +M +K
Sbjct: 246 GLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTEAYELYSQMIVKKFSP 305
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ T ++ G ++ +A L EML +P TF+ ++ +C++G + A+ L+
Sbjct: 306 YVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVDALCKEGNVKGAMNLL 365
Query: 209 KKIVAKSF 216
++ ++F
Sbjct: 366 AVMMKEAF 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
LGF + + +I L K + +AL +L ++ + DVV Y+ ++ + E +
Sbjct: 231 LGFPLNQVTYGTLINGLCKMGKTTEALQVLRKIDGKLVNTDVVMYSTIIDSLCKEIFVTE 290
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL+ +M+V P V T + I G C ++ +A + M+ PNV T N L+
Sbjct: 291 AYELYSQMIVKKFSPYVVTLSSLIYGFCIVGQLKKAFCLFHEMLLTNIHPNVYTFNILVD 350
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNL 150
ALC+ G++ A ++ M + L++
Sbjct: 351 ALCKEGNVKGAMNLLAVMMKEAFRLHV 377
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD--LSK 133
+IP + T +Y + N V +A+ MI++ P+++ N +LG+L ++ + +
Sbjct: 92 IIPFLRT-RLYSHSRSVPNHVHDAVSSFHHMIRMNPTPSIIEFNKILGSLVKSNNNHYTT 150
Query: 134 AKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
A + ++ G+ ++ T I+++ ++ A + +LK F P + T + ++
Sbjct: 151 AISLFHQLEFNGIIPDIVTLSILINCYCHLGQMNFAFSIFGNILKMGFQPNTVTLNTLVK 210
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
MC G + EAL ++A F + L+
Sbjct: 211 GMCLNGKVKEALHFHDHVIALGFPLNQVTYGTLI 244
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G PGV+ + MI+ L K + DA+ +N+MK PD ++ V+ G V + D
Sbjct: 515 GIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSA 574
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
++F +M+ P+V Y ING CK + A ++ +M +PNVVT L+G
Sbjct: 575 LKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGG 634
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG---------LVGKAEIGEASLLLE- 174
+ G KA + M + N T+ +++G L+ K E + SL+L+
Sbjct: 635 FSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDF 694
Query: 175 --EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M+ + + +T+++II C+C+ G+++ A L K++ K F + + ALL
Sbjct: 695 FATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALL 749
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 103/199 (51%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + +M + G+ PD Y +++SG+ +G + L EML L L PD Y Y ++
Sbjct: 434 ALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVD 493
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
G + N++D+A ++ + ++ G P VV N ++ LC+ G ++ A + +M +
Sbjct: 494 GFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAP 553
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ +T+ ++DG V + ++ A + +M+K+ + P + ++I C+ ++ A ++
Sbjct: 554 DEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVF 613
Query: 209 KKIVAKSFAPGARAWEALL 227
+ + + + P + L+
Sbjct: 614 RAMQSFNLEPNVVTYTILI 632
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 108/218 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++G P + + +I F R +A L + K+ + P+ YT ++ +GD
Sbjct: 336 MTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGD 395
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
YV ++ ++ G PD+ +Y +I+G ++D A+ + + M++ G P+ N
Sbjct: 396 YVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNV 455
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+ G AK ++ EM ++ + + Y ++DG + E+ +A+ L E ++ K
Sbjct: 456 LMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKG 515
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P ++ +I +C+ G + +A+ + K+ + AP
Sbjct: 516 IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAP 553
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 43 PDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG------LIPDVYTYNVYINGLCKQNKV 96
P VV +L+ +V G EL+D+ML G L+ D Y+ + + GLC KV
Sbjct: 162 PCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKV 221
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
+E +++D GC PNVV N ++ C+ GDL +A V +E+ LKG L TY +
Sbjct: 222 EEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGAL 281
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+DG + LL EM F++II + GL+++A E+M+ +
Sbjct: 282 IDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGC 341
Query: 217 APGARAWEALLLHSGS 232
P + L+ S S
Sbjct: 342 EPDITTYNILINFSCS 357
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%)
Query: 39 DGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
+G P+VV Y +++ G +GD + +F+E+ + G +P + TY I+G CK K
Sbjct: 234 NGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQV 293
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
Q+++ M +G NV N+++ A + G + KA +M+ M G E ++ TY I+++
Sbjct: 294 VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
I EA LE ++ P ++ ++ C++G A +++ KI P
Sbjct: 354 FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKP 413
Query: 219 GARAWEALL 227
++ A +
Sbjct: 414 DLVSYGAFI 422
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P +T ++ K+ + A +L ++ + G KPD+V Y + G VA G+ +
Sbjct: 378 PNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMV 437
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++M+ G+ PD YNV ++GLCK+ + A ++ M+ L +P+ TL+
Sbjct: 438 REKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIR 497
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+L KA + + + KG++ + Y +M+ GL ++ +A + +M P T
Sbjct: 498 NNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYT 557
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL--LHSGSDLTYSETTFAGLF 245
+I ++ ++ AL++ +++ + + P A+ +L+ +D++ +E F +
Sbjct: 558 HSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQ 617
Query: 246 NQN 248
+ N
Sbjct: 618 SFN 620
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + + +I K + +LN+M G+ +V + ++ G K
Sbjct: 270 GFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ M +G PD+ TYN+ IN C ++ EA + ++ + PN + L+ A
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C+ GD A ++ ++ G + +L +Y + G V EI A ++ E+M++K +P
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ ++ +C+KG A L+ +++ + P A + L+
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLV 492
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A ++ M + G +PD+ Y I+++ + G + +E + L+P+ ++Y ++
Sbjct: 329 AAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMH 388
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
CKQ A ++ + + G KP++V+ + G++ A V ++M KGV
Sbjct: 389 AYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFP 448
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ Y +++ GL K A LLL EML P + + ++ + +++A EL
Sbjct: 449 DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELF 508
Query: 209 KKIVAKSFAPGARAWEALL 227
+ +++K PG + ++
Sbjct: 509 EVVMSKGIDPGVVGYNVMI 527
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%)
Query: 50 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
IV+ G+ G + +L D+ G +P+V YNV I+G CK+ + A ++ + +
Sbjct: 210 IVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLK 269
Query: 110 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
G P + T L+ C+AG ++ EM + G+ +N+ + ++D + +A
Sbjct: 270 GFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ ++ M + P +T++ +I C G I EA E +++ ++ P ++ L+
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLM 387
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 104/196 (53%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ + +I L K++ DA + ++M + I PDV + ++ G G LF
Sbjct: 17 VVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFS 76
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+M++ + P VYT+ + ++GLCK+ K+ EA ++ M+K G PNVVT +++ C
Sbjct: 77 QMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVN 136
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+++K K V + + GV N +Y IM++G + EA +L +EM + P + T+
Sbjct: 137 EVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYS 196
Query: 190 NIICCMCQKGLINEAL 205
++I +C+ ++ L
Sbjct: 197 SLIDGLCKSTMLGSLL 212
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 52/259 (20%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V FT ++ L KE + +A ++ M +DG+ P+VV YT ++ G + K +
Sbjct: 85 PSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHV 144
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG---- 123
F + +G+ P+ +YN+ ING CK V+EA+ + M G P VT ++L+
Sbjct: 145 FRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCK 204
Query: 124 ----------------------------ALCEAGDLSKA--------------------K 135
ALC++ L KA +
Sbjct: 205 STMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGIQSDILKNAQ 264
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V +++ +KG LN+ TY IM++GL + EA LL +M P + T++ I +
Sbjct: 265 DVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRAL 324
Query: 196 CQKGLINEALELMKKIVAK 214
K +A +L +K++A+
Sbjct: 325 FHKDENEKAEKLFRKMIAR 343
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F +I + DA + +QM I P V +TI++ G+ EG + +
Sbjct: 50 PDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSV 109
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
M+ G++P+V TY + G C N+V++ + ++ ++G PN + N ++ C+
Sbjct: 110 IAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCK 169
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+++A + KEM +G+ TY ++DGL +G + M+ YP +
Sbjct: 170 IKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVL 229
Query: 188 FDNIICCMCQKGLINEALELMKKI 211
+ I +C+ +++A+ L+KKI
Sbjct: 230 Y---IDALCKSNHLDKAIALVKKI 250
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ ++ ++K GI+ D++ ++F ++L+ G ++ TYN+ IN
Sbjct: 243 AIALVKKIKDQGIQSDIL---------------KNAQDVFQDLLIKGYSLNIQTYNIMIN 287
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
GLCK+ DEA ++ M G P+ VT T + AL + KA+ + ++M +G+
Sbjct: 288 GLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGL 345
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
++ GFC GV D M F ERGM ALY+ ++M + G P + + +L +V +G
Sbjct: 150 KEFGFCSGVFDML-MKAF---AERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKG 205
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +FD+++ G++PDVY ++ +N C+ +VD A+++++ M+K G +PNVVT N
Sbjct: 206 EGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYN 265
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ GD + V++ M +GV N+ T +++ G K ++ EA LL E+
Sbjct: 266 GLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I+ LV DAL++ + M + G+ P+ + +L GD +
Sbjct: 432 GITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRA 491
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ E+L G +N I+GLCK K+ EA + D M +LG P+ +T TL
Sbjct: 492 MMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDG 551
Query: 125 LCEAGDLSKA---KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
C+ G++ +A KGVM+ + ++ Y ++DGL ++ + + LL EM +
Sbjct: 552 YCKNGNVQEAFQIKGVMERQAMSA---SIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGL 608
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T+ +I C + +++A L +++ + F P ++ D SE T
Sbjct: 609 SPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEAT 667
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 9/223 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + ++ V +L M + G+ +VV T+++ G +G
Sbjct: 252 MVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGK 311
Query: 61 YVKLDELF-----DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
+ ++L DE+LV+ D Y V ++G C+ ++++A++I D M+++G K N+
Sbjct: 312 MDEAEKLLREVEEDELLVV----DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNM 367
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
V CNTL+ C+ G + +A+ V M ++ + ++Y +LDG + ++ +A +L EE
Sbjct: 368 VICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEE 427
Query: 176 MLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
ML P T++ +I + G ++AL L +V + P
Sbjct: 428 MLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTP 470
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%)
Query: 25 RGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYN 84
R DA+ I ++M + G+K ++V ++ G G + + +F M+ L PD Y+YN
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406
Query: 85 VYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
++G C++ KV +A + + M+ G P VVT NT++ L + G A + M +
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
GV N + MLD + A +L +E+L + F + F+ +I +C+ G + EA
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526
Query: 205 LELMKKIVAKSFAPGARAWEAL 226
+ ++ +P + L
Sbjct: 527 GAVFDRMKELGLSPDEITYRTL 548
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%)
Query: 41 IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+KPD Y +L G EG K L +EML G+ P V TYN I GL D+A+
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+ M++ G PN ++C T+L + GD +A + KE+ +G + + M+ GL
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
++ EA + + M + P T+ + C+ G + EA ++ + ++ +
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASI 577
Query: 221 RAWEALL 227
+ +L+
Sbjct: 578 EMYNSLI 584
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 112/221 (50%), Gaps = 8/221 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P V+ + ++ L +++R +A IL++M + D++ S + + D
Sbjct: 638 MIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM----LDFDILAVHNKCSDKLVKND 693
Query: 61 YV----KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
K+ + D+ + + + YN+ I+GLCK K+DEA ++ ++ G P+
Sbjct: 694 LTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNF 753
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T TL+ A +G++ +A + EM KG+ N+ Y +++GL I A L ++
Sbjct: 754 TYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKL 813
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFA 217
+K P + T++ +I C C+ G +++A L +K+ + +
Sbjct: 814 YQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A +L+ + G PD Y ++ G+ + +L DEML GLIP++ YN I
Sbjct: 735 EARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALI 794
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
NGLCK +D A ++ + + G PN VT N L+G C GDL KA + ++M +G+
Sbjct: 795 NGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854
Query: 148 LNL 150
+
Sbjct: 855 TRI 857
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + + + +I L K + D +L +M+ G+ P+VV Y ++SG E
Sbjct: 568 MERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQK 627
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-------CKP 113
K L+ EM+ G P+V + ++ L + +++ EA I+D M+ C
Sbjct: 628 LDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSD 687
Query: 114 NVVT-------------------CNTL---------LGALCEAGDLSKAKGVMKEMGLKG 145
+V CN+L + LC++G L +A+ V+ + +G
Sbjct: 688 KLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG 747
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ TY ++ + EA L +EML+K P + ++ +I +C+ G I+ A
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQ 807
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
L K+ K P A + L+
Sbjct: 808 RLFYKLYQKGLVPNAVTYNILI 829
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEG 59
M + G V+ T ++R K+ + +A +L ++++D + D Y +++ G G
Sbjct: 287 MSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMG 346
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ DEML +GL ++ N I G CK +V EA ++ M+ KP+ + N
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TLL C G +SKA + +EM G+ + TY ++ GLV +A L M+++
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + ++ C + G + A+ L K+I+ + F A+ ++
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMI 514
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +I +A + ++M + G+ P++ Y +++G+ G+ +
Sbjct: 747 GFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRA 806
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
LF ++ GL+P+ TYN+ I C+ +D+A ++ + M + G ++
Sbjct: 807 QRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALY-ILNQMKQD-GIKPDVVCYTIVLSGIVAEGDYVKLD 65
P + + +++ L K R + +Y +++M+ +KP++V YTI++ + + +
Sbjct: 196 PDIYSYNFLVKNLCKS-RTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREAT 254
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
L D + G PD + YN + G C ++ EAI++ + M + G +P+++T NTL+ L
Sbjct: 255 RLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGL 314
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
++G +S+AK +++ M KG + TY +++G+ K E A LLEEM K P +
Sbjct: 315 SKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNT 374
Query: 186 STFDNIICCMCQKGLINEALEL 207
T++ ++ +C+ + ++A+EL
Sbjct: 375 CTYNTLLHGLCKSRMFDKAMEL 396
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 GFCP--GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P G +D +R L +R DA+ ++ ++ PD+ Y ++ +
Sbjct: 158 GISPDKGTVDLA--VRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLS 215
Query: 63 KLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
+ DEM + P++ TY + I+ +C + EA ++VD + + G KP+ NT+
Sbjct: 216 LVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTI 275
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C S+A V M KGVE +L TY ++ GL + EA LL M +K
Sbjct: 276 MKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGH 335
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P T+ +++ MC+KG AL L++++ K +P + LL
Sbjct: 336 FPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLL 381
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +++ RG +A+ + N+MK+ G++PD++ Y ++ G+ G +
Sbjct: 264 GFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEA 323
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L M G PD TY +NG+C++ + A+ +++ M GC PN T NTLL
Sbjct: 324 KKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHG 383
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
LC++ KA + M G++L++ +Y + L + +A
Sbjct: 384 LCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADA 428
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K P ++ +T +I + + +A +++ ++++G KPD Y ++ G
Sbjct: 227 KFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGS 286
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ E+++ M G+ PD+ TYN I GL K +V EA +++ M + G P+ VT +L+
Sbjct: 287 EAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLM 346
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
+C G+ A +++EM +KG N TY +L GL +A L M
Sbjct: 347 NGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLK 406
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+++ + +C G + +A E+ V A+ L
Sbjct: 407 LDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTL 450
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 12/211 (5%)
Query: 28 DALYILNQMK--QDGIKPDVVCYTIVLSGIVAEGD--YVKLD---ELFDEMLVLGLIPDV 80
D++ L M PD Y I+L+ D Y L + + M+ G+ PD
Sbjct: 104 DSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDK 163
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
T ++ + LC ++VD+A++++ + C P++ + N L+ LC++ LS + E
Sbjct: 164 GTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDE 223
Query: 141 MGLK-GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII--CCMCQ 197
M K V+ NL TY I++D + + EA+ L++ + ++ F P ++ I+ CM
Sbjct: 224 MRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLS 283
Query: 198 KGLINEALELMKKIVAKSFAPGARAWEALLL 228
+G +EA+E+ ++ K P + L+
Sbjct: 284 RG--SEAIEVYNRMKEKGVEPDLITYNTLIF 312
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P ++ + +I L K R +A +L M + G PD V YT +++G+ +G+
Sbjct: 295 MKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGE 354
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L +EM + G P+ TYN ++GLCK D+A+++ +M G K ++ + T
Sbjct: 355 TLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYAT 414
Query: 121 LLGALCEAGDLSKAKGVM 138
+ ALC G ++ A V
Sbjct: 415 FVRALCSVGRVADAYEVF 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P + +T ++ + ++ + AL +L +M+ G P+ Y +L G+
Sbjct: 330 MAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRM 389
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K EL+ M GL D+ +Y ++ LC +V +A ++ D ++ +V +T
Sbjct: 390 FDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYST 449
Query: 121 LLGAL 125
L L
Sbjct: 450 LESTL 454
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 123/268 (45%), Gaps = 48/268 (17%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSG----- 54
M+ +G PGV+ F ++ L+K R A + ++M K G+KPD Y I++ G
Sbjct: 181 MKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNS 240
Query: 55 IVAEG--------------DYVKLDELFDEMLVLGLI------------------PDVYT 82
+V EG D V + L D + G I PDV T
Sbjct: 241 MVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVT 300
Query: 83 YNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM- 141
Y I G C++ +VDEA+ I++ M G KPN+VT NTL+ LCEA K K ++++M
Sbjct: 301 YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMK 360
Query: 142 GLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG-- 199
G G + T+ +++ + EA + E M K S+++ +I +CQKG
Sbjct: 361 GDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDY 420
Query: 200 -----LINEALELMKKIVAKSFAPGARA 222
L +E E K+I+ S+ P A
Sbjct: 421 GKAEMLFDELFE--KEILLSSYGPKPLA 446
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 42/262 (16%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +T +IR +++ +AL IL +M G+KP++V Y ++ G+ + K+ E+
Sbjct: 296 PDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEI 355
Query: 68 FDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
++M G IPD T+N IN C +DEA ++ ++M KL + + + L+ LC
Sbjct: 356 LEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLC 415
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLH-------TYRIMLDGLVGKAEIGEASLLLEE---- 175
+ GD KA+ + E+ K + L+ + +Y+ M L + +A +L +
Sbjct: 416 QKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKR 475
Query: 176 ------------------------------MLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
ML++ F P +D +I +K A
Sbjct: 476 GTQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAK 535
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
E ++K++ S+ P W ++L
Sbjct: 536 ETLEKMLKSSYKPQTSTWHSIL 557
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 41/248 (16%)
Query: 5 GFCPGVMDFTDMIRFLVKEER---GMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
GF + M+ L +E+ + LY + + +K + + ++ G +
Sbjct: 112 GFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLF 171
Query: 62 VKLDELFDEMLVLGLIPDV------------------------------------YTYNV 85
+ +LF+ M ++G+ P V YTYN+
Sbjct: 172 KESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNI 231
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
I G CK + VDE M C P+VVT NTL+ LC AG + A ++ M K
Sbjct: 232 LIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKC 291
Query: 146 VEL--NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+L ++ TY ++ G K E+ EA +LEEM + P T++ +I +C+ ++
Sbjct: 292 KDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDK 351
Query: 204 ALELMKKI 211
E+++++
Sbjct: 352 MKEILEQM 359
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + M ++L + + A +L Q+ + G + D + Y IV+ G EG Y L
Sbjct: 444 PLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHCKEGSYENGYGL 502
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
ML +PD+ Y+ I+G +++K A + ++ M+K KP T +++L L E
Sbjct: 503 LVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLE 562
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G + ++ GV+ M + + N++ L L + +A + E + K F +
Sbjct: 563 QGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVK--- 619
Query: 188 FDNIICCMCQKGLINEALELM 208
D ++ +C K EA +L+
Sbjct: 620 MDEVVQFLCNKRRALEACKLL 640
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKE---ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
MR G CP V+ + ++ L + +R D L +N P+ V Y IV+SG
Sbjct: 224 MRNFGCCPDVVSYNTLMTGLCRVNDVDRARDLLKEINS-------PNDVSYMIVISGYCK 276
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ + +F+EM+ G+ P V ++N I+G K + A+ + MI GC P+VVT
Sbjct: 277 LSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVT 336
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+L+ C G + + EM + NL+TY I++ L + EA LL +
Sbjct: 337 FTSLIDGYCRVGQVDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLN 396
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEA 204
+ P++ ++ +I C+ G ++EA
Sbjct: 397 QSEIVPQAFIYNPVIDGYCKSGNVDEA 423
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 39/247 (15%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV------------- 62
+ R L +E + A + + M+ DG+ PD I++S G +
Sbjct: 99 LFRSLCRESQHNSAKILYDVMRSDGLLPDGRLLGILVSSFAFVGRFDVCKEIVNDCLRNS 158
Query: 63 -------------------KLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI 100
+LD+ LF E++ L L D +T+N+ I G C ++DEA
Sbjct: 159 VDVNVVVYNNILNILVKCGRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAF 218
Query: 101 QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+ ++ M GC P+VV+ NTL+ LC D+ +A+ ++KE+ N +Y I++ G
Sbjct: 219 RFLNDMRNFGCCPDVVSYNTLMTGLCRVNDVDRARDLLKEIN----SPNDVSYMIVISGY 274
Query: 161 VGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
+ + EAS + EM++ P ++F+ +I + G I+ A+++ KK++ P
Sbjct: 275 CKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDV 334
Query: 221 RAWEALL 227
+ +L+
Sbjct: 335 VTFTSLI 341
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
LVK R DA+ + ++ + + D + I++ G G+ + ++M G PD
Sbjct: 173 LVKCGRLDDAVSLFREIVRLNLNVDSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPD 232
Query: 80 VYTYNVYINGLCKQNKVD-------------------------------EAIQIVDSMIK 108
V +YN + GLC+ N VD EA I + M++
Sbjct: 233 VVSYNTLMTGLCRVNDVDRARDLLKEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVR 292
Query: 109 LGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGE 168
G +P+V + N L+ +AGD+S A + K+M L G + ++ T+ ++DG ++
Sbjct: 293 SGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDY 352
Query: 169 ASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
L EM + F T+ II +C+ + EA EL++ + P A + ++
Sbjct: 353 GLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVI 411
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 4/237 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V F +I VK A+ + +M G PDVV +T ++ G G
Sbjct: 290 MVRSGVQPSVASFNALIDGFVKAGDISSAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQ 349
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL++EM ++YTY++ I+ LCK N++ EA +++ + + P N
Sbjct: 350 VDYGLELWNEMKARNFSANLYTYSIIISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNP 409
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C++G++ +A ++ +M K L T+ I++ G K EA + ML
Sbjct: 410 VIDGYCKSGNVDEANAIVVDMEKKCKPDKL-TFTILIIGHCMKGRAYEAIGIFYRMLATG 468
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYS 237
P T + C+ + G+ EA + K+I+ K+ G+ + + SD +S
Sbjct: 469 CSPDDVTIRTLSSCLLKSGMPTEAARV-KEILFKN--QGSSPKNSYHQSTDSDTQHS 522
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
++G P + MI K + +A + N+M+ GI P+ V Y+ ++ G+ G
Sbjct: 240 QMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRIS 299
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
EL DEM G PD+ TYN I+ LCK + VD+ IQ+ ++ T N L+
Sbjct: 300 YAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQL-----------DMYTYNILI 348
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
LC+ G L A+ + +++ +KG L + TY IM++GL + + EA LL +M
Sbjct: 349 DGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCV 408
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + T + II + + A +L+++++ +
Sbjct: 409 PDAVTCETIIRALFENDKNERAEKLLREMIVR 440
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 41/261 (15%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV----- 62
P V+ F +I + ++A + ++M I P+V + I++ + EG+
Sbjct: 158 PDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNL 217
Query: 63 ------------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG 110
K + + +G+ PD +YN+ ING CK V+EA + + M G
Sbjct: 218 LAMMMKQVNEVNKAKHVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRG 277
Query: 111 CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG------------------------LKGV 146
PN VT ++L+ LC+ G +S A ++ EM +G+
Sbjct: 278 ISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGI 337
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+L+++TY I++DGL + + +A ++ +++L K + T+ +I +C +GL++EA
Sbjct: 338 QLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEA 397
Query: 207 LMKKIVAKSFAPGARAWEALL 227
L+ K+ P A E ++
Sbjct: 398 LLSKMEDNGCVPDAVTCETII 418
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 17/242 (7%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
KLG P + F +I + + +AL+ + M + V Y I+++G+ G
Sbjct: 48 KLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGLCKMGKTT 107
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ + ++ + +V +N I+ LCK+ V EA ++ MI P+VVT N+L+
Sbjct: 108 EALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLI 167
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC-- 180
C G L +A G+ EM LK + N++T+ I++D L + + A LL M+K+
Sbjct: 168 YGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNE 227
Query: 181 ---------------FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
P + +++ +I C+ ++NEA L ++ + +P + +
Sbjct: 228 VNKAKHVLSTITQMGVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSS 287
Query: 226 LL 227
L+
Sbjct: 288 LI 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F ++L LG P T+N ING+C K EA+ D M+ N VT L+ L
Sbjct: 41 SIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILINGL 100
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G ++A ++++ K V +N+ + ++D L + + EA L +M+ K P
Sbjct: 101 CKMGKTTEALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDV 160
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
TF+++I C G + EA L ++V K+ P + L+
Sbjct: 161 VTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPNVYTFNILV 202
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDV---------VC---- 47
MR G P + ++ +I L K R A ++++M+ +G +PD+ +C
Sbjct: 273 MRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNGQQPDICTYNSLIDALCKNHH 332
Query: 48 -----------YTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
Y I++ G+ +G +F ++L+ G V+TY + INGLC + +
Sbjct: 333 VDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLL 392
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
DEA ++ M GC P+ VTC T++ AL E +A+ +++EM ++G+
Sbjct: 393 DEAEALLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIVRGL 442
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A I ++KLG P +T NTL+ +C G +A M LN TY I+++
Sbjct: 39 AFSIFAKILKLGHHPTTITFNTLINGMCLNGKFKEALHFHDHMLAHVFHLNQVTYAILIN 98
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
GL + EA L ++ K + II +C++ L+ EA EL +++ K +P
Sbjct: 99 GLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIIDSLCKEKLVTEAYELYSQMIVKKISP 158
Query: 219 GARAWEALL 227
+ +L+
Sbjct: 159 DVVTFNSLI 167
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M I PDVV Y ++ G G +L DEM G P++ TYN ++ LCK++
Sbjct: 1 MHCKNIIPDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHH 60
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+D+AI ++ + G +PN+ T L+G LC+ G L A+ V + + +KG L+++ Y +
Sbjct: 61 LDKAITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAV 120
Query: 156 MLDGLVGKAEIGEASLLLEEML--KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
M+ G EA +L +M C P ++T + IIC + K I++A L+ +++
Sbjct: 121 MIHGFCNNGLFDEALAMLSKMTTDNNC-NPNAATNEIIICSLFDKNEIDKAKRLLHEMIV 179
Query: 214 KSF 216
+
Sbjct: 180 RGL 182
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + ++ L K A+ +L+++K GI+P++ YTI++ G+ G
Sbjct: 36 MHDRGQPPNIITYNSILDALCKRHHLDKAITLLSKLKDQGIQPNIYTYTILIGGLCKGGR 95
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK-LGCKPNVVTCN 119
++F+ +LV G DVY Y V I+G C DEA+ ++ M C PN T
Sbjct: 96 LEDARKVFEVILVKGYNLDVYAYAVMIHGFCNNGLFDEALAMLSKMTTDNNCNPNAATNE 155
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + ++ KAK ++ EM ++G+
Sbjct: 156 IIICSLFDKNEIDKAKRLLHEMIVRGL 182
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + +I K + AL ++++M G P+++ Y +L + K L
Sbjct: 8 PDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITL 67
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
++ G+ P++YTY + I GLCK ++++A ++ + ++ G +V ++ C
Sbjct: 68 LSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAYAVMIHGFCN 127
Query: 128 AGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
G +A ++ +M N T I++ L K EI +A LL EM+
Sbjct: 128 NGLFDEALAMLSKMTTDNNCNPNAATNEIIICSLFDKNEIDKAKRLLHEMI 178
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 113 PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLL 172
P+VV N+L+ C++G +S A ++ EM +G N+ TY +LD L + + +A L
Sbjct: 8 PDVVAYNSLIDGFCKSGKISYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLDKAITL 67
Query: 173 LEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
L ++ + P T+ +I +C+ G + +A ++ + I+ K + A+ A+++H
Sbjct: 68 LSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGYNLDVYAY-AVMIH 123
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 100/184 (54%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
GI P+VV YT ++ G G + LF +M+ + P+VYT+N ++ CK+ K++EA
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
++++M++ K +VV ++L+ C ++ KA+ + K M + + ++ +Y IM++
Sbjct: 86 KNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINE 145
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
+ EA L EEM K +P T+ +I +C+ G ++ A+EL+ ++ + P
Sbjct: 146 FCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPN 205
Query: 220 ARAW 223
+
Sbjct: 206 IITY 209
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F ++ KE + +A +LN M + +K DVV Y+ +++G + K +
Sbjct: 64 PNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSI 123
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M L DV +YN+ IN CK VDEAI++ + M P+VVT +TL+ LC+
Sbjct: 124 FKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCK 183
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
+G LS A ++ EM +G N+ TY ++D L
Sbjct: 184 SGRLSYAMELVDEMDDRGEPPNIITYCPIVDVL 216
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 61 YVKLDELFDEM---------LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 111
YVKL+E+ +++ L+ G+ P+V TY I+G C K++EA+ + MI
Sbjct: 3 YVKLEEIQEQLYNCCDKLLNLMCGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENI 62
Query: 112 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL 171
PNV T N L+ A C+ G + +AK V+ M K ++ ++ Y +++G E+ +A
Sbjct: 63 NPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQS 122
Query: 172 LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + M ++ +++ +I C+ +++EA++L +++ K P + L+
Sbjct: 123 IFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLI 178
>Medtr6g005000.1 | PPR containing plant-like protein | HC |
chr6:556927-554990 | 20130731
Length = 645
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 37/264 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P ++ + +I K+ R DA Y+ M G+ P+++ Y+ +++G+ EG
Sbjct: 289 MEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGK 348
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQ-NKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +LF++M+ G+ PDV +YN I+G CK+ K+ ++ MI +G +P+ VTC
Sbjct: 349 IKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCR 408
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVEL--NLHTY-------------------RIMLD 158
+ G L A ++ E+ G+++ NL+ Y RI D
Sbjct: 409 IVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQD 468
Query: 159 G---------------LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G L + EA +L EM KK +T+ II C+C+ +E
Sbjct: 469 GDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSE 528
Query: 204 ALELMKKIVAKSFAPGARAWEALL 227
A L++++V+ P AL+
Sbjct: 529 AENLLEEMVSLGILPDLEIKRALI 552
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 109/217 (50%), Gaps = 10/217 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +LG F M L +E L +M+++G +PD+V Y I+++G +
Sbjct: 254 MGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRR 313
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
L+ M + G++P++ +Y+ +NGLCK+ K+ EA Q+ + M++ G P+VV+ NT
Sbjct: 314 LEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNT 373
Query: 121 LLGALC-EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ C E G + + ++ EM G+ + T RI+ G + ++ A ++ E+ +
Sbjct: 374 LISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRF 433
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ +D ++ +C++G + A+SF
Sbjct: 434 GIKIPENLYDYLLVALCKEG---------RPFAARSF 461
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 24 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 83
E+G++ + + + P+VV +L+G+ + E+++EM LG+ + YT+
Sbjct: 210 EKGLETFW---KNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTF 266
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
N+ + LC++ D+ ++ M + G +P++VT N L+ C+ L A + K MG+
Sbjct: 267 NIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGI 326
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
+GV NL +Y +++GL + +I EA L +M+++ P +++ +I C++G
Sbjct: 327 RGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEG 382
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%)
Query: 46 VCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDS 105
V + +++ V G K E F + + +P+V N +NGL K N + E ++ +
Sbjct: 194 VIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWEVYEE 253
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M +LG N T N + LC GD K G +++M +G E +L TY I+++G K
Sbjct: 254 MGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRR 313
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
+ +A L + M + P ++ ++ +C++G I EA +L ++V + P ++
Sbjct: 314 LEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNT 373
Query: 226 LL 227
L+
Sbjct: 374 LI 375
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F P V+ ++ L K + + +M + GI + + I+ + EGD K+
Sbjct: 223 SFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKV 282
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ ++M G PD+ TYN+ ING CK+ ++++A + M G PN+++ + L+
Sbjct: 283 NGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNG 342
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV---GKAEIGEASLLLEEMLKKCF 181
LC+ G + +A + +M +G++ ++ +Y ++ G GK ++ + LL EM+
Sbjct: 343 LCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRS--LLHEMIGIGI 400
Query: 182 YPRSSTFDNIICCMCQKGLINEA 204
P DN+ C + +G E
Sbjct: 401 RP-----DNVTCRIVFQGYTREG 418
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 37/257 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M + G P V+ + +I KE M +L++M GI+PD V IV G EG
Sbjct: 359 MVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREG 418
Query: 60 DY--------------VKLDE-LFDEMLVL---------------------GLIPDVYTY 83
+K+ E L+D +LV +P++ TY
Sbjct: 419 KLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTY 478
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
LC N V+EA+ + M K K N+ T ++ LC S+A+ +++EM
Sbjct: 479 IKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVS 538
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
G+ +L R +++G + ++ +A LL+ K+ + +++ I+ C+ G + E
Sbjct: 539 LGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAE 598
Query: 204 ALELMKKIVAKSFAPGA 220
+EL K+V + P +
Sbjct: 599 LMELQDKLVKIGYVPNS 615
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 69/133 (51%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+AL + ++M + +K ++ Y ++S + + + L +EM+ LG++PD+ I
Sbjct: 493 EALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALI 552
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
NG C++N VD+A+ ++ K + + N ++ CE G++++ + ++ G
Sbjct: 553 NGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYV 612
Query: 148 LNLHTYRIMLDGL 160
N T + ++ GL
Sbjct: 613 PNSLTCKYVIRGL 625
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Query: 20 LVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
L KE R A L ++ QDG P++ Y + + + + + L EM +
Sbjct: 449 LCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKL 508
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
++ TY I+ LC+ + EA +++ M+ LG P++ L+ CE D+ KA ++
Sbjct: 509 NLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLL 568
Query: 139 KEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQK 198
K + + +Y ++ + E L ++++K + P S T +I + QK
Sbjct: 569 KFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGL-QK 627
Query: 199 GL 200
G+
Sbjct: 628 GM 629
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ M+ L + +A+ +LN+ + I D + Y V + + + +L+++M
Sbjct: 398 YMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMK 457
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
G PD++TYN+ I+ + +VD A++I + + C+P+V++ N+L+ L + GD+
Sbjct: 458 QDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVD 517
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A KEM KG+ ++ TY +++ ++ A L +EM+ + P T++ ++
Sbjct: 518 EAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILL 577
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEAL-LLHSG 231
C+ + G EA++L K+ + P + + L L SG
Sbjct: 578 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG 617
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P + + +I + R A+ I +++ +PDV+ Y +++ + GD
Sbjct: 456 MKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGD 515
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ F EM GL PDV TY+ I K +KV+ A + D MI GC PN+VT N
Sbjct: 516 VDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNI 575
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
LL L +G ++A + ++ +G+ + TY ++
Sbjct: 576 LLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 9/217 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G+ + F ++ L K+++ A + MK+ +PD YTI+ I G
Sbjct: 214 MLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIM---IRMTGK 270
Query: 61 YVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
K DE LF ML G ++ YN I L K D+A+ + M++ GC+PN T
Sbjct: 271 AGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFT 330
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+ LL L G L+K ++ EM K + ++ Y + +G + EA L M
Sbjct: 331 YSVLLNVLVAEGQLNKLDNIV-EMSKKYMNKQIYAYFVRTLSKLGHS--SEAHRLFCNMW 387
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ +++ +C G I EA++L+ + K
Sbjct: 388 NVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEK 424
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
+K+ G++ + Y +L G + D K ++ +ML G D++ +N+ ++ L K K
Sbjct: 179 VKKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQK 238
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
VD+A ++ + M + C+P+ T ++ +AG ++ + + M KG LNL Y
Sbjct: 239 VDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNT 298
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE---ALELMKKIV 212
M++ L +A LL +M++ P T+ ++ + +G +N+ +E+ KK +
Sbjct: 299 MIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYM 358
Query: 213 AK 214
K
Sbjct: 359 NK 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 34/260 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF ++ + MI L K A+ + ++M ++G +P+ Y+++L+ +VAEG
Sbjct: 284 MLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ 343
Query: 61 YVKLDELFDEMLVLGLIPDVYTY----------------------NVYING--------- 89
KLD + EM + +Y Y NV+ G
Sbjct: 344 LNKLDNIV-EMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSML 402
Query: 90 --LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
LC K+ EAI +++ + + + NT+ AL +S + ++M G
Sbjct: 403 ESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPP 462
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY I++ + A + EE+ P +++++I C+ + G ++EA
Sbjct: 463 PDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMR 522
Query: 208 MKKIVAKSFAPGARAWEALL 227
K++ K P + L+
Sbjct: 523 FKEMQEKGLNPDVVTYSTLI 542
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+R L K +A + M K D Y +L + + G + +L +
Sbjct: 366 FVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKC 425
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ D YN L + +V + + M + G P++ T N L+ + AG + A
Sbjct: 426 ITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAV 485
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ +E+ + ++ +Y +++ L ++ EA + +EM +K P T+ +I C
Sbjct: 486 KIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECF 545
Query: 196 CQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + A L +++A+ +P + LL
Sbjct: 546 GKTDKVEMACSLFDEMIAEGCSPNLVTYNILL 577
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L+ M++ G+K + I++ G + LD + GL + Y+Y + G
Sbjct: 146 LLDDMEKRGVKGSISTVNILI------GFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYL 199
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ D+A + M++ G ++ N LL AL + + KA V ++M + E +
Sbjct: 200 RLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTF 259
Query: 152 TYRIMLDGLVGKAEIGEASL-LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
TY IM+ + GKA + SL L + ML+K F ++ +I + + + ++A+ L K
Sbjct: 260 TYTIMIR-MTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSK 318
Query: 211 IVAKSFAPGARAWEALL 227
+V P + LL
Sbjct: 319 MVENGCQPNEFTYSVLL 335
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 16/243 (6%)
Query: 5 GFCPGVMDFTDMIRFLVKEER------GMDALYILNQMKQ---------DGIKPDVVCYT 49
G C G+ D R L++ ER G +L +Q+ +G + D
Sbjct: 268 GLC-GLGRLEDAKRVLLEMERKGFLPRGFSSLVFDDQLMSGNENGLLNGNGTQVDEWTCN 326
Query: 50 IVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKL 109
+L+G+ G K E+ ++ G++P +YN+ +N C++ +++ I + M K
Sbjct: 327 ALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKR 386
Query: 110 GCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
G KP+ VT NTL+ CE GDL++A+ +K+M KGV L TY +++G +
Sbjct: 387 GLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRC 446
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
+ EE+ K P ++ ++I C+C+ G + +A ++ +V + +P A + L+
Sbjct: 447 FEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEA 506
Query: 230 SGS 232
S S
Sbjct: 507 SCS 509
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+++ LV A+ + N + + G++PD Y + D K EL + M G
Sbjct: 125 LLQSLVDLRHFQKAITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLMEKDG 184
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P Y YN+ + GLCK K+ +A ++ D MI+ PN VT NTL+ C+ G + +A
Sbjct: 185 IRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAF 244
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR---SSTFDNII 192
+ M + N+ TY +L GL G + +A +L EM +K F PR S FD+ +
Sbjct: 245 RLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVFDDQL 304
Query: 193 CCMCQKGLIN 202
+ GL+N
Sbjct: 305 MSGNENGLLN 314
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + F +I + A + +M + G+ P + Y +++G D
Sbjct: 383 MEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCD 442
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+V+ E+F+E+ G+ P+V +Y IN LCK K+ +A ++ M+ G PN N
Sbjct: 443 FVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNM 502
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A C A + EM G++ + TY +++G+ + EA L M +K
Sbjct: 503 LIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRKG 562
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P T+++++ G + LEL + + P + L+
Sbjct: 563 YKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLI 609
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 92/193 (47%)
Query: 35 QMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+M++ G+KP V + +++ GD + + +M+ G+ P + TYN ING
Sbjct: 382 EMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTC 441
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
+I + + G KPNV + +L+ LC+ G L A+ V+ +M +GV N Y
Sbjct: 442 DFVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYN 501
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
++++ ++ +A L EM++ T++ +I + + G + EA L + K
Sbjct: 502 MLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMTRK 561
Query: 215 SFAPGARAWEALL 227
+ P + +L+
Sbjct: 562 GYKPDVITYNSLM 574
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +I + DA LN+M Q+GI +V Y +++GI G +
Sbjct: 492 GVSPNADIYNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEA 551
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ LF M G PDV TYN ++ ++ +++ D+M K G KP++ T + L+ +
Sbjct: 552 ENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLINS 611
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G ++ K + +G+K + + Y M+ G + +A L ++M+ +
Sbjct: 612 CRKKGVVTMEKMFQEMLGMKLIP-DRAVYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSD 670
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I + ++E ++ + AK P A ++ L+
Sbjct: 671 KVTYNCLILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKILV 713
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
IL +++ +G+ P V Y I+++ +GD K +EM GL P T+N IN C
Sbjct: 344 ILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFC 403
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
+ +++A + V MI+ G P + T N+L+ D + + +E+ KG++ N+
Sbjct: 404 ETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVK 463
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+Y +++ L ++ +A ++L +M+ + P + ++ +I C +A + ++
Sbjct: 464 SYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEM 523
Query: 212 VAKSFAPGARAWEALLLHSGSD--LTYSETTF 241
+ + L+ G + +T +E F
Sbjct: 524 IQNGIDATIVTYNTLINGIGKNGRVTEAENLF 555
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 6/225 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G+ P V+ + ++ L + + MK+ GIKP + + +++ +G
Sbjct: 558 MTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLINSCRKKG- 616
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V ++++F EML + LIPD YN I G + V +A+ + M+ G + VT N
Sbjct: 617 VVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSDKVTYNC 676
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A +S+ K ++ +M KG+ TY+I++ G + A EM
Sbjct: 677 LILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKILVKGHCDLKDFNGAYFWYREMFDSG 736
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
F ++ IC GL E + +IV+ + E
Sbjct: 737 F-----ILNDCICSQLISGLREEEMLHEAEIVSSELTSELQQLEG 776
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 66 ELFDEMLVLGLI-PDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
ELF M G I P+ + N + L +AI + + + + G +P+ + +
Sbjct: 105 ELFYSMKNDGFILPNCFI-NRLLQSLVDLRHFQKAITLFNDVAESGVRPDSFAYGKAVLS 163
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
DL+K ++ M G+ + Y ++L GL +I +A + +EM+++ P
Sbjct: 164 AAMLKDLNKCFELINLMEKDGIRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPN 223
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
+ TF+ +I C+ G I+EA L ++
Sbjct: 224 TVTFNTLIDGYCKVGGIDEAFRLRARM 250
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ + +++ + + +A +MK+ + DVV YT ++ G G+
Sbjct: 230 MVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGE 289
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +FD M+ GL+P V TYN I LCK++ V A+ + D M+ GC PN+ T N
Sbjct: 290 VKRSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNV 349
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC +G++ + MK M G ++ TY +++ + E+ + L E+M
Sbjct: 350 VIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEKGLELFEKMGNGT 409
Query: 181 FYPRSSTFDNIICCMCQKGLINE---ALELMKKIVAKSFAP 218
P T++ +I M + + A +L+ ++V + F P
Sbjct: 410 CLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGFLP 450
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%)
Query: 24 ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTY 83
+R AL +L +M + G+ P +V Y +L G G + E F EM DV TY
Sbjct: 218 KRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTY 277
Query: 84 NVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGL 143
++G +V + ++ D+M+K G P+V T N L+ LC+ + A V EM
Sbjct: 278 TTMVHGFGVAGEVKRSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVG 337
Query: 144 KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
KG NL TY +++ GL EI ++ M + P T++ +I C +G + +
Sbjct: 338 KGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYCDEGELEK 397
Query: 204 ALELMKKI 211
LEL +K+
Sbjct: 398 GLELFEKM 405
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 4/234 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR L P F + + A+ + M + G D+ + +L ++ +
Sbjct: 126 MRALRLGPTPKTFAILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILD-VLCKTK 184
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
V++ + L D +YN+ NG C + A+Q++ M++ G P +VT NT
Sbjct: 185 RVEMANNLFKTLRGRFKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNT 244
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL G L++A EM + E+++ TY M+ G E+ + + + M+K+
Sbjct: 245 LLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVKEG 304
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSG 231
P +T++ +I +C+K + AL + ++V K P + + L HSG
Sbjct: 305 LVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVVIRGLCHSG 358
>Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14710511-14713103 | 20130731
Length = 745
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 7/223 (3%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD--- 65
V + + + +++ R M A + N M ++GI+P Y I+L G+ +KLD
Sbjct: 203 SVKAYDALFKVILRRGRYMMAKRVYNAMLREGIEPTRHTYNILLWGMFLS---LKLDTAV 259
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+D+M G+ PDV TYN I+G + KVDEA + M PNV++ T+L
Sbjct: 260 RFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTMLKGF 319
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR- 184
+ G + +A V +EM G++ N T+ +L GL ++ EA +L EM+++ P+
Sbjct: 320 VDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGEMVERYIAPKD 379
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+S F ++ C C+ G ++ A++++ ++ S A + L+
Sbjct: 380 NSVFMKLMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLI 422
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ I + Q +K Y + I+ G Y+ +++ ML G+ P +TYN+ +
Sbjct: 191 EAVKIFQKCDQKSVK----AYDALFKVILRRGRYMMAKRVYNAMLREGIEPTRHTYNILL 246
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G+ K+D A++ D M G +P+VVT NTL+ + +A+ + EM K +
Sbjct: 247 WGMFLSLKLDTAVRFYDDMKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLM 306
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
N+ +Y ML G V ++ A + EEM P + TF ++ +C + EA +
Sbjct: 307 PNVISYTTMLKGFVDVGKVDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNV 366
Query: 208 MKKIVAKSFAP 218
+ ++V + AP
Sbjct: 367 LGEMVERYIAP 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P V+ + +I + ++ +A + +MK + P+V+ YT +L G V G
Sbjct: 265 MKSRGIEPDVVTYNTLIHGFFRFKKVDEAESLFVEMKGKNLMPNVISYTTMLKGFVDVGK 324
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIK--LGCKPNVVTC 118
+ E+F+EM G+ P+ T+ + GLC +K+ EA ++ M++ + K N V
Sbjct: 325 VDRAFEVFEEMKDCGIKPNAVTFTTLLPGLCDADKMVEAGNVLGEMVERYIAPKDNSVFM 384
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
L+ C+ G+L A V+ M + Y ++++ A LL+++++
Sbjct: 385 K-LMECQCKGGNLDAAVDVLNAMIRLSIPTEAGHYGVLIENFCKANVYDRAEKLLDKLIE 443
Query: 179 KCFYPR--------SSTFDNIICCMCQKGLINEALELMKKIVAK 214
K R +S ++ +I +C G +A ++++ K
Sbjct: 444 KDIVLRPETSYEMEASAYNRMIGYLCDNGKTAKAEMFFRQLMKK 487
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ MI +L + A Q+ + G+ D V + ++ G EG+ E+ M
Sbjct: 461 YNRMIGYLCDNGKTAKAEMFFRQLMKKGVL-DPVAFNNLMCGHSKEGNPDSAFEIATIMS 519
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
+ D Y+Y + I ++ + +A +D M++ G +PN +++ +L E G +
Sbjct: 520 RRKVHSDEYSYRLLIESYLRKGEPADAKTALDHMLEGGHEPNSSLYRSVMESLFEDGRVQ 579
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
A VMK M KGV+ N+ +L+ L + + EA ++ ++ P FD+++
Sbjct: 580 TASRVMKNMVEKGVKNNMDLVSKILEALFIRGHVEEALGRIDLLMNSGCEP---DFDHLL 636
Query: 193 CCMCQKGLINEALELMKKIVAK 214
+C+K AL L+ ++ +
Sbjct: 637 SILCEKEKRIAALRLLDFVLER 658
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M G+ P V D +++ + E R +D AL + N MK DGI + V + ++ G+ +EG
Sbjct: 339 MENKGYLPNV-DTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSEG 397
Query: 60 ---DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVV 116
D + EL +E G + YN I GL KQN+ DEA + + M KL P V
Sbjct: 398 RIEDGFSILELMEETKE-GSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLF--PRAV 454
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
+ + C+ G + AK + +M +G ++ Y ++ G I EA L+ EM
Sbjct: 455 DRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEM 514
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +P +STF+ II C++G I AL+ M+ I A+ P + L+
Sbjct: 515 ISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLI 565
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G PG F ++R L + + +L+ + P + + +L +V E +
Sbjct: 101 IGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVKEDIDMA 160
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ M+ G+ D YT+ + + GLC N++ E +++ + G PN V NTLL
Sbjct: 161 REFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLH 220
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
ALC G + +A+ +M EM V+ N T+ I++ + + +A +LLE+ P
Sbjct: 221 ALCRNGKVGRARSLMNEM----VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVP 276
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T ++ +C G + EA E+++++ + + A A+ L+
Sbjct: 277 DVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLI 320
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + + ++ L + + A ++N+M + P+ V + I++S E + V+
Sbjct: 207 GVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFNILISSYYKEENLVQA 262
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L ++ L L+PDV T + LC +V EA ++++ + LG + V NTL+
Sbjct: 263 LVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKG 322
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C G + +K+M KG N+ TY I++ G + A L +M
Sbjct: 323 FCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRN 382
Query: 185 SSTFDNIICCMCQKGLINEA---LELMKK 210
TFD +I +C +G I + LELM++
Sbjct: 383 FVTFDTMIRGLCSEGRIEDGFSILELMEE 411
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ--DGIKPDVVCYTIVLSGIVAE 58
M+ G + F MIR L E R D IL M++ +G K + Y ++ G+ +
Sbjct: 374 MKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQ 433
Query: 59 GDYVKLDE---------------------------------LFDEMLVLGLIPDVYTYNV 85
+ + E ++D+M+ G IP + YN
Sbjct: 434 NRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNS 493
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++G + + EA+++++ MI C P T N ++ CE G + A M+++ +G
Sbjct: 494 LVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARG 553
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
N TY ++D L K +I +A + EM++K P
Sbjct: 554 CVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILP 591
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 8/187 (4%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M Q G+ PD Y I+++G + LF +M +IP+V TY I+GLCK K
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 60
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA--------KGVMKEMGLKGVE 147
+ A+++VD M G P+++T +++L ALC+ + KA V +++ +KG
Sbjct: 61 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYN 120
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L+++ Y +M+ G K EA LL +M P + T++ II + +K + A +L
Sbjct: 121 LDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKL 180
Query: 208 MKKIVAK 214
+++++A+
Sbjct: 181 LREMIAR 187
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 8/162 (4%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ PD +YN+ ING CK KVDEA+ + M PNVVT +L+ LC++G +S A
Sbjct: 5 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 64
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL--------EEMLKKCFYPRSS 186
++ EM +GV ++ TY +LD L ++ +A LL E++ K +
Sbjct: 65 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVY 124
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+ +I C KGL NEAL L+ K+ P A+ +E ++L
Sbjct: 125 AYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIIL 166
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL--- 64
P V+ +T +I L K + AL ++++M G+ PD++ Y+ +L + K
Sbjct: 43 PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 102
Query: 65 -----DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
D++F+++ V G DVY Y V I G C + +EA+ ++ M GC P+ T
Sbjct: 103 LTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYE 162
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGV 146
++ +L + + A+ +++EM +G+
Sbjct: 163 IIILSLFKKDENDMAEKLLREMIARGL 189
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M + G P+ + N ++ C+ + +A + K+M K + N+ TY ++DGL +
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 60
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
I A L++EM + P T+ +I+ +C+ +++A+ L+ K+ + F
Sbjct: 61 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVF 111
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF ++ +I K R +A +M + GI PDVV Y I++ G+ EG +
Sbjct: 254 GFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEA 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLC-------------------------------KQ 93
++ +EM +GL PD Y YN I GLC K+
Sbjct: 314 AKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHTILICEMCKR 373
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
V EA ++ + M KLGC+P+VVT NTL+ LC+A +L KAK + ++ + G +LH
Sbjct: 374 GMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEV-GRRHSLH-- 430
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKC 180
L G ++ +++ LL++ + C
Sbjct: 431 ---LSLSQGSGQVSDSARLLKKAKEMC 454
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 110/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + ++R ++ E+ AL + M + ++P+ Y +++ G G+
Sbjct: 110 MREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGE 169
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ DEM +G++P V + + G C+ N VDEA ++ + M + P++++CN
Sbjct: 170 VKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNV 229
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L C+ G L +A + + G LN ++Y +++ EA +M K+
Sbjct: 230 VLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQG 289
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + +I + ++G + EA ++++++ P A + A++
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVI 336
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ + P ++ ++ K R +AL + +K DG + Y+ +++
Sbjct: 215 MKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFFKARR 274
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y + + +M G++PDV Y + I GL K+ +V EA ++++ M ++G P+ N
Sbjct: 275 YREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNA 334
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ G L++A+ + E+ E N+ T+ I++ + + + EA L +M K
Sbjct: 335 VIQGLCDVGLLNRAQSLRLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLG 390
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P TF+ +I +C+ + +A L K+
Sbjct: 391 CEPSVVTFNTLINGLCKANNLEKAKNLFCKL 421
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 76/162 (46%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E F M G+ PD + YN + + + ++ A+ + +M+K +PN T N L+
Sbjct: 105 ESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGF 164
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G++ A+ ++ EM G+ + + +L G + EA L +M + + P
Sbjct: 165 CKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDM 224
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++ C+ G + EAL + I F+ ++ +L+
Sbjct: 225 ISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLI 266
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 42/254 (16%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-----QDGIKPDVVCYTIVLSGIVAE 58
L G +D R L K + +A IL K +KPD++ Y I+L+ + +
Sbjct: 431 LSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCMD 490
Query: 59 GDYVKLDELFDEMLVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ F+ + G PD TY I GL ++ DEA ++ M K G +P +
Sbjct: 491 REVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSV 550
Query: 118 CNTLLGALCEAGDLSKA-----------------------------------KGVMKEMG 142
TL+ LC +S+A +G++ E+
Sbjct: 551 YRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSISALEKYLFGEKLEQVIRGLL-ELD 609
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
K + L Y I+L G ++ EA ++L + + +++ ++I +C++ ++
Sbjct: 610 FKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLH 669
Query: 203 EALELMKKIVAKSF 216
+A+++ + K F
Sbjct: 670 DAVKIFLYSLEKGF 683
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
++AI+ M + G +P+ NT+L + L A + M VE N +TY +
Sbjct: 100 TEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNM 159
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++DG + E+ A +L+EM + P + +I+ CQ ++EA +L + S
Sbjct: 160 LIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS 219
Query: 216 FAP 218
+ P
Sbjct: 220 YPP 222
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 16 MIRFLVKE-ERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
+I FLVKE +R Y+ N + + G+KP++ Y ++ V L +EM
Sbjct: 61 LIYFLVKEVDREK---YVFNTISKKGVKPNLHMYNKMVDEAV---------NLLNEMHSK 108
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
+ PD +TY I+GLC + + ++D M + G NV+T N+LL ALC+ +
Sbjct: 109 RMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITYNSLLDALCKNHQIKD- 167
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
+G++ NL+TY +++DG+ ++ +A + +++L K ++ ++ ++
Sbjct: 168 ---------QGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYHLDVIMYNVMVNW 218
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C++GL +EAL ++ K+ + P +E ++
Sbjct: 219 LCKEGLFDEALSILSKMEHNNCTPDVVTYEIVI 251
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A+ +LN+M + PD YT ++ G+ G + +L DEM G +V TYN +
Sbjct: 97 EAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVWDLIDEMHERGQPANVITYNSLL 156
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ LCK +++ + G +PN+ T L+ +C+ G L AK V +++ +KG
Sbjct: 157 DALCKNHQIKDQ----------GIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYH 206
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
L++ Y +M++ L + EA +L +M P T++ +I + + ++A++L
Sbjct: 207 LDVIMYNVMVNWLCKEGLFDEALSILSKMEHNNCTPDVVTYEIVIRALFKNVKNDKAVKL 266
Query: 208 M 208
+
Sbjct: 267 L 267
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%)
Query: 27 MDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
+DAL +Q+K GI+P++ YT+++ GI G ++ ++L+ G DV YNV
Sbjct: 156 LDALCKNHQIKDQGIQPNLYTYTLLVDGICKNGKLKDAKAVYQDLLIKGYHLDVIMYNVM 215
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
+N LCK+ DEA+ I+ M C P+VVT ++ AL + KA ++ EM +G+
Sbjct: 216 VNWLCKEGLFDEALSILSKMEHNNCTPDVVTYEIVIRALFKNVKNDKAVKLLCEMIDRGL 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G D +Y IN LCK + A+Q++ + ++ KPNV L+ L + D +
Sbjct: 20 GFKLDHVSYRTLINELCKTGETRAALQVLRKIERILVKPNV-----LIYFLVKEVD--RE 72
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
K V + KGV+ NLH Y M+D EA LL EM K P + T+ ++I
Sbjct: 73 KYVFNTISKKGVKPNLHMYNKMVD---------EAVNLLNEMHSKRMTPDTFTYTSLIDG 123
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C G ++ +L+ ++ + + +LL
Sbjct: 124 LCISGRTSDVWDLIDEMHERGQPANVITYNSLL 156
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+G P ++ +T ++ L K R + ++ +M++DG+ DVV Y++ + G V E V+
Sbjct: 192 MGSRPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVE 251
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ EM+ G+ D +Y + I+G K V+++ + MIK G PN VT ++
Sbjct: 252 VFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMS 311
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
A C+ G + +A G+ M G+EL+ + +++DG + LL EM K+ P
Sbjct: 312 AYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGP 371
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVA 213
T++ ++ + + G EA E K + A
Sbjct: 372 NVVTYNAVVNGLSKYGRTQEADEFSKNVTA 401
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+++ L+KE R +DA +L + QD + V Y +V+ G+ G K +L + G
Sbjct: 686 ILKVLIKEGRALDAYKLLMGV-QDDLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKG 744
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ ++ YN INGLC + EA ++ DS+ KL + +T TL+ ALC G L A+
Sbjct: 745 VNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAE 804
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V K+M L G + Y +L ++ +A LL +M K+ + T ++I C
Sbjct: 805 HVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCY 864
Query: 196 CQKGLINEALELMKKIVAKSFAP 218
CQKG + ALE K K +P
Sbjct: 865 CQKGDMEGALEFYYKFKGKDISP 887
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P + +T ++ K+ R +A + +MK GI+ D + +++ G GD
Sbjct: 294 MIKEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGD 353
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ +L EM G+ P+V TYN +NGL K + EA + ++ +VVT +T
Sbjct: 354 FDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEADEFSKNVT-----ADVVTYST 408
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL E ++ K + G+ +++ +++ L + L + M +
Sbjct: 409 LLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQAYEDVYALYKGMPEMD 468
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
P S T+ +I C+ G INEALE+ S + A
Sbjct: 469 LVPNSITYCTMIDGYCKVGKINEALEVFDDFRKTSISSYA 508
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 106/218 (48%), Gaps = 1/218 (0%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
V+ ++ ++ +E+ + L ++++ GI DVV +++ + Y + L+
Sbjct: 403 VVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQAYEDVYALYK 462
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
M + L+P+ TY I+G CK K++EA+++ D K + N+++ LC+ G
Sbjct: 463 GMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDDFRKTSI-SSYACYNSIINGLCKKG 521
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ A + E+ KG+ L+ T+R+++ + + L+ M ++ +
Sbjct: 522 MVEMAIEALLELDHKGLMLDTGTHRLLMKTIFKENSSKVVLDLVCRMESLELDIYNAICN 581
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ I +C++GL+++A +L + K +++ +LL
Sbjct: 582 DSIFLLCKRGLLDDAYQLWMAMKKKGLPVTCKSYHSLL 619
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 48/253 (18%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + +++ G+ ++V Y +++G+ +G ++ LFD + L L+ TY I
Sbjct: 733 ALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLNLMTSEITYATLIY 792
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LC++ + +A + M+ G +P N+LL A + G L KA ++ +M + ++
Sbjct: 793 ALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAFELLNDMEKQYIKF 852
Query: 149 NLHT-----------------------------------YRIMLDGLVGKAEIGEASLLL 173
+ T + M+ GL K + E +L
Sbjct: 853 DNFTVSSVINCYCQKGDMEGALEFYYKFKGKDISPDFLGFLYMIRGLCTKGRMEETRSVL 912
Query: 174 EEMLKKCFYPR-----SSTFD-----NIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
EML+ +S D + I +C +G I EA++++ ++A F P R+
Sbjct: 913 REMLQSKNVAEMINIVNSRVDTESICDFIAALCDQGRIQEAVKVL-NLIASEFFPAQRS- 970
Query: 224 EALLLHSGSDLTY 236
+ + GSD ++
Sbjct: 971 -STCNNQGSDKSH 982
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%)
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ G L+KA + + KGV LN+ Y +++GL + EA L + + K
Sbjct: 720 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 779
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
T+ +I +C++G + +A + KK+V F P + + +LL+ +
Sbjct: 780 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATS 830
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 4/212 (1%)
Query: 20 LVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIP 78
L KE +D L++L +M+ +KPD V Y +V+ + +GD ++L +M + G+ P
Sbjct: 114 LCKEAENVDLGLWVLRKMEDFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICP 173
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
D+ TY I GLC +++EA ++V M GC PN V + +L LC + +A ++
Sbjct: 174 DLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELL 233
Query: 139 KEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK-KCFYPRSSTFDNIICCMC 196
EM G N+ TY ++ + E EA +L+ M CF + F +I +C
Sbjct: 234 DEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVF-TLIESLC 292
Query: 197 QKGLINEALELMKKIVAKSFAPGARAWEALLL 228
+G ++EA +++ K+V + + +L++
Sbjct: 293 TEGRVDEAYKVVDKLVVEHCVSRGDCYNSLVI 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G CP ++ + MI L R +A ++ M+ +G P+ V + VL G+ +
Sbjct: 170 GICPDLITYMTMIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERA 229
Query: 65 DELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
EL DEM G P+V TY I CK+ + EA+ I+D M GC N VT TL+
Sbjct: 230 LELLDEMEKSGDCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIE 289
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+LC G + +A V+ ++ ++ Y ++ + ++ A L +EML P
Sbjct: 290 SLCTEGRVDEAYKVVDKLVVEHCVSRGDCYNSLVISFIRVKKLEGAENLFKEMLAAEIKP 349
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ ++ +C K + + L+ I F
Sbjct: 350 DTLASSLLLKELCLKDRVLDGFYLLDTIENMGF 382
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 38/230 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEG 59
MR G P + + ++ L + + AL +L++M++ G P+VV YT ++ G
Sbjct: 201 MRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNVVTYTSLIQSFCKRG 260
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
++ + + D M G + T I LC + +VDEA ++VD ++ C N
Sbjct: 261 EWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGRVDEAYKVVDKLVVEHCVSRGDCYN 320
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVE-------------------------------- 147
+L+ + L A+ + KEM ++
Sbjct: 321 SLVISFIRVKKLEGAENLFKEMLAAEIKPDTLASSLLLKELCLKDRVLDGFYLLDTIENM 380
Query: 148 -----LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
++ Y IML GL K + EA+ L + MLKK R D I
Sbjct: 381 GFLSSIDSDIYSIMLIGLWQKNHLTEATKLAKIMLKKAIPLRPPYKDRAI 430
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P T +I L K + A+ + +++ G+K V Y +L G+ G +
Sbjct: 176 GFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRVDEA 235
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
E+ +M + DVY+Y+ +NGLCK + DEA+++ D + +G +P+VVT N L+
Sbjct: 236 VEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEG 295
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
G + GV+K M G +L Y+ +L GL+ E EA + +EM++ F
Sbjct: 296 YSREGREMEGVGVLKMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVD 355
Query: 185 SSTFDNIICCMC-----QKGLINEALELMKKIVAKSFAPGARAWEALL 227
S ++ +C +KGL+ +A E+ +K+ + R E ++
Sbjct: 356 SRMMGTLVRRLCKLSWREKGLLEDACEVFEKMKERGLVVDKRTVEVMV 403
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 40/248 (16%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
+ + G GV + ++R L R +A+ IL MK I DV Y+ V++G+ G
Sbjct: 207 LERKGLKLGVQAYNCLLRGLAYVGRVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGR 266
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ELFDE + +GL PDV T+N I G ++ + E + ++ M + GC +++ T
Sbjct: 267 SDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKMMKEHGCVADLINYKT 326
Query: 121 LLGALCEAGDLSKAKGVMKEM---------------------------GL---------- 143
+L L + + +A GV KEM GL
Sbjct: 327 VLHGLLKWNETVEAFGVYKEMVRIGFEVDSRMMGTLVRRLCKLSWREKGLLEDACEVFEK 386
Query: 144 ---KGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+G+ ++ T +M++ L + EA + L +M++ + F+ +I +C +G
Sbjct: 387 MKERGLVVDKRTVEVMVEALFRGEKFDEALVNLNDMVRWGYSLEGIAFEEVIEGLCGQGR 446
Query: 201 INEALELM 208
++EA+ +
Sbjct: 447 VDEAVSTL 454
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 95/200 (47%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFD 69
+ DF ++ LV ++ + ++ + PD Y+I++ ++ + + +
Sbjct: 111 ISDFNHLLMALVIAQKPDFCQTMFTKLSSFHLVPDSCTYSIMIRCHCSKNELEEAKRVLF 170
Query: 70 EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG 129
+L G PD T V IN LCK+ KV +A+++ + + + G K V N LL L G
Sbjct: 171 TVLENGFEPDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVG 230
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
+ +A ++ +M + +++++Y +++GL EA L +E + P TF+
Sbjct: 231 RVDEAVEILMDMKTGNIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFN 290
Query: 190 NIICCMCQKGLINEALELMK 209
+I ++G E + ++K
Sbjct: 291 ALIEGYSREGREMEGVGVLK 310
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 47/239 (19%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
++K GF +T +I K R +A +M ++GI PDVV Y I++ G+ EG
Sbjct: 120 IKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGIVPDVVLYAIMIRGLSEEGR 179
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ +EM +GL D Y YNV I GLC V EA ++ + M KLGC+ ++VT N
Sbjct: 180 VGEAGKMLEEMNQIGLTHDAYCYNVVIQGLCDVGMVVEAKELFNRMEKLGCELSIVTFNA 239
Query: 121 LLGALCEAGDLSKAKGV--------------------------------MKEMGLKG--- 145
L+ LC+A +L +A + +KEM G
Sbjct: 240 LINGLCKAKNLEEAMNLFYKMDVGRKYSFRFSLSQGSCQVSDGASLQKKVKEMCEAGQIL 299
Query: 146 ------------VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+ L++ +Y I+++ E A L EE+ KK P S T+ II
Sbjct: 300 KAYKLITDHAGDLRLDIISYNILINAFCLDREFNAAYNLFEELQKKGLSPDSVTYGTII 358
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + ++R ++ E+ AL + M + ++P+ Y +++ GI G+
Sbjct: 14 MREFGVEPDAHMYNTILREMLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGICKRGE 73
Query: 61 YVKLDELFDEMLVLGLIP-DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
EL DEM +G P D+ + NV +NG CK ++ EA+ V + K G N +
Sbjct: 74 VKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKTGRLKEALSFVWLIKKDGFSLNRNSYT 133
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+L+ +A +A+ +M +G+ ++ Y IM+ GL + +GEA +LEEM +
Sbjct: 134 SLINGFFKARRYREARVWYTKMFEEGIVPDVVLYAIMIRGLSEEGRVGEAGKMLEEMNQI 193
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
+ ++ +I +C G++ EA EL ++
Sbjct: 194 GLTHDAYCYNVVIQGLCDVGMVVEAKELFNRM 225
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
Query: 1 MRKLGFCPGVMDFTDMI-RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+++GF P M +++ K R +AL + +K+DG + YT +++G
Sbjct: 84 MKRVGFPPSDMISCNVVLNGFCKTGRLKEALSFVWLIKKDGFSLNRNSYTSLINGFFKAR 143
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
Y + + +M G++PDV Y + I GL ++ +V EA ++++ M ++G + N
Sbjct: 144 RYREARVWYTKMFEEGIVPDVVLYAIMIRGLSEEGRVGEAGKMLEEMNQIGLTHDAYCYN 203
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
++ LC+ G + +AK + M G EL++ T+ +++GL + EA L +M
Sbjct: 204 VVIQGLCDVGMVVEAKELFNRMEKLGCELSIVTFNALINGLCKAKNLEEAMNLFYKM 260
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 39/185 (21%)
Query: 66 ELFDEMLVLGLIPDV-----------------------------------YTYNVYINGL 90
E F M G+ PD YTYN+ I+G+
Sbjct: 9 ESFVRMREFGVEPDAHMYNTILREMLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGI 68
Query: 91 CKQNKVDEAIQIVDSMIKLGCKP-NVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK+ +V A +++D M ++G P ++++CN +L C+ G L +A + + G LN
Sbjct: 69 CKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKTGRLKEALSFVWLIKKDGFSLN 128
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA---LE 206
++Y +++G EA + +M ++ P + +I + ++G + EA LE
Sbjct: 129 RNSYTSLINGFFKARRYREARVWYTKMFEEGIVPDVVLYAIMIRGLSEEGRVGEAGKMLE 188
Query: 207 LMKKI 211
M +I
Sbjct: 189 EMNQI 193
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + +I K R +A +M ++GI PDVV Y I++ G+ EG +
Sbjct: 254 GFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEA 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLC-------------------------------KQ 93
++ +EM +GL PD Y YN I GLC K+
Sbjct: 314 AKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCKR 373
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
V EA ++ + M KLGC+P+VVT NTL+ LC+A +L KAK + ++ + G +LH
Sbjct: 374 GMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEV-GRRHSLH-- 430
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKC 180
L G ++ +++ LL++ + C
Sbjct: 431 ---LSLSQGSGQVSDSARLLKKAKEMC 454
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 110/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + ++R ++ E+ AL + M + ++P+ Y +++ G G+
Sbjct: 110 MREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGE 169
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ DEM +G++P V + + G C+ N VDEA ++ + M + P++++CN
Sbjct: 170 VKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNV 229
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L C+ G L +A + + G LN ++Y +++ EA +M K+
Sbjct: 230 VLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEG 289
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + +I + ++G + EA ++++++ P + + A++
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVI 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ + P ++ ++ K R +AL + +K DG + Y +++
Sbjct: 215 MKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARR 274
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y + + +M G++PDV Y + I GL K+ +V EA ++++ M ++G P+ N
Sbjct: 275 YREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNA 334
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ L++A+ + E+ E N+ T+ I++ + + + EA L +M K
Sbjct: 335 VIQGLCDVDLLNRAQSLSLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLG 390
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P TF+ +I +C+ + +A L K+ G R L L GS
Sbjct: 391 CEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEV-----GRRHSLHLSLSQGS 437
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 76/162 (46%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E F M G+ PD + YN + + + ++ A+ + +M+K +PN T N L+
Sbjct: 105 ESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGF 164
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G++ A+ ++ EM G+ + + +L G + EA L +M + + P
Sbjct: 165 CKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDM 224
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++ C+ G + EAL + I F+ ++ +L+
Sbjct: 225 ISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLI 266
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 42/254 (16%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-----QDGIKPDVVCYTIVLSGIVAE 58
L G +D R L K + +A IL K +KPD++ Y I+L+ + +
Sbjct: 431 LSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCMD 490
Query: 59 GDYVKLDELFDEMLVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ F+ + G PD TY I GL ++ DEA ++ M K G +P +
Sbjct: 491 REVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSV 550
Query: 118 CNTLLGALCEAGDLSKA-----------------------------------KGVMKEMG 142
TL+ LC +S+A +G++ E+
Sbjct: 551 YRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEKYLFGEKLEQVIRGLL-ELD 609
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
K + L Y I+L G ++ EA ++L + + +++ ++I +C++ ++
Sbjct: 610 FKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLH 669
Query: 203 EALELMKKIVAKSF 216
+A+++ + K F
Sbjct: 670 DAVKIFLYSLEKGF 683
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
++AI+ M + G +P+ NT+L + L A + M VE N +TY +
Sbjct: 100 TEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNM 159
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++DG + E+ A +L+EM + P + +I+ CQ ++EA +L + S
Sbjct: 160 LIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS 219
Query: 216 FAP 218
+ P
Sbjct: 220 YPP 222
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF + +I K R +A +M ++GI PDVV Y I++ G+ EG +
Sbjct: 254 GFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEA 313
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLC-------------------------------KQ 93
++ +EM +GL PD Y YN I GLC K+
Sbjct: 314 AKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCKR 373
Query: 94 NKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
V EA ++ + M KLGC+P+VVT NTL+ LC+A +L KAK + ++ + G +LH
Sbjct: 374 GMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEV-GRRHSLH-- 430
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKC 180
L G ++ +++ LL++ + C
Sbjct: 431 ---LSLSQGSGQVSDSARLLKKAKEMC 454
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 110/227 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P + ++R ++ E+ AL + M + ++P+ Y +++ G G+
Sbjct: 110 MREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGE 169
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+ DEM +G++P V + + G C+ N VDEA ++ + M + P++++CN
Sbjct: 170 VKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNV 229
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+L C+ G L +A + + G LN ++Y +++ EA +M K+
Sbjct: 230 VLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEG 289
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + +I + ++G + EA ++++++ P + + A++
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVI 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ + P ++ ++ K R +AL + +K DG + Y +++
Sbjct: 215 MKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFFKARR 274
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y + + +M G++PDV Y + I GL K+ +V EA ++++ M ++G P+ N
Sbjct: 275 YREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNA 334
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ LC+ L++A+ + E+ E N+ T+ I++ + + + EA L +M K
Sbjct: 335 VIQGLCDVDLLNRAQSLSLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLG 390
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
P TF+ +I +C+ + +A L K+ G R L L GS
Sbjct: 391 CEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEV-----GRRHSLHLSLSQGS 437
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 76/162 (46%)
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
E F M G+ PD + YN + + + ++ A+ + +M+K +PN T N L+
Sbjct: 105 ESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGF 164
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C+ G++ A+ ++ EM G+ + + +L G + EA L +M + + P
Sbjct: 165 CKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDM 224
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ + ++ C+ G + EAL + I F+ ++ +L+
Sbjct: 225 ISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLI 266
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 42/254 (16%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMK-----QDGIKPDVVCYTIVLSGIVAE 58
L G +D R L K + +A IL K +KPD++ Y I+L+ + +
Sbjct: 431 LSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNALCMD 490
Query: 59 GDYVKLDELFDEMLVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
+ F+ + G PD TY I GL ++ DEA ++ M K G +P +
Sbjct: 491 REVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSV 550
Query: 118 CNTLLGALCEAGDLSKA-----------------------------------KGVMKEMG 142
TL+ LC +S+A +G++ E+
Sbjct: 551 YRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEKYLFGEKLEQVIRGLL-ELD 609
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
K + L Y I+L G ++ EA ++L + + +++ ++I +C++ ++
Sbjct: 610 FKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLH 669
Query: 203 EALELMKKIVAKSF 216
+A+++ + K F
Sbjct: 670 DAVKIFLYSLEKGF 683
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
++AI+ M + G +P+ NT+L + L A + M VE N +TY +
Sbjct: 100 TEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNM 159
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
++DG + E+ A +L+EM + P + +I+ CQ ++EA +L + S
Sbjct: 160 LIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS 219
Query: 216 FAP 218
+ P
Sbjct: 220 YPP 222
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
F P + I+ K + +AL + + M++ GI+PD + +LS + ++ +
Sbjct: 528 NFAPSAFCYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDTIACNHILSIYCRKREFNEA 587
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L +E G+ + Y+YN +IN LC+++ ++A+Q++ M+K P VV +TL+
Sbjct: 588 LALSEEFRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVVNYSTLISC 647
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ + KA + M G+ N+ T+ ++D + +I +A L E+M K+ +P
Sbjct: 648 FAKQTNSKKAVKLFTRMTKVGITFNIKTHTALIDLCIRNCKIDKACDLFEDMEKRGVHPD 707
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ +I C G + A L +++ + +P + +
Sbjct: 708 QITYNTLIAAFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFI 750
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQ---DGIKPDVVCYTIVLSGIVAEGDYVKL 64
P +++ T +I L K + M ++N+ + G K D Y ++ G EGD V
Sbjct: 459 PSIVNHTSIIHRLCKS-KTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFCREGDMVSA 517
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L +EM P + Y I G K + A+++ M K G +P+ + CN +L
Sbjct: 518 GKLLEEMGSNNFAPSAFCYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDTIACNHILSI 577
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C + ++A + +E GV LN ++Y ++ L ++ +A LL MLK+ P
Sbjct: 578 YCRKREFNEALALSEEFRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNVLPG 637
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I C ++ +A++L ++ + AL+
Sbjct: 638 VVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTALI 680
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM----DALYILNQMKQDGIKPDVVCYTIVLSGIV 56
+R G P + +T M+ F ++ R A I + + G P+VV Y+ + G+
Sbjct: 330 LRNFGPTPNIHAYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLC 389
Query: 57 AEG----------DYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIV 103
G + +LDE + +EM +G++PDVY Y++ I+ CK + + +
Sbjct: 390 KAGSLRVVWKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDAFCKNGDDKKVVDLR 449
Query: 104 DSMIKLGCKPNVVTCNTLLGALCEAGDLSK--AKGVMKEMGLKGVELNLHTYRIMLDGLV 161
+ M KP++V +++ LC++ + + +G G + + Y ++DG
Sbjct: 450 EDMKLNQIKPSIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFC 509
Query: 162 GKAEIGEASLLLEEMLKKCFYPRS 185
+ ++ A LLEEM F P +
Sbjct: 510 REGDMVSAGKLLEEMGSNNFAPSA 533
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
R G + + I L +E AL +L M + + P VV Y+ ++S + +
Sbjct: 594 FRDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTN 653
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN-KVDEAIQIVDSMIKLGCKPNVVTCN 119
K +LF M +G+ ++ T+ I+ LC +N K+D+A + + M K G P+ +T N
Sbjct: 654 SKKAVKLFTRMTKVGITFNIKTHTALID-LCIRNCKIDKACDLFEDMEKRGVHPDQITYN 712
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
TL+ A C G++ AK + M +G N+ TY ++
Sbjct: 713 TLIAAFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFINA 752
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 104/266 (39%), Gaps = 55/266 (20%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM----DALYILNQMKQDGIKPDVVCYTIVLSGIV 56
+R G P + +T M+ F ++ R A I + + G P+VV Y+ + G+
Sbjct: 155 LRNFGPTPNIHTYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLC 214
Query: 57 AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV- 115
G + +L M + + +N + GLC++ ++DEA Q+++ M +G P+V
Sbjct: 215 KAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIGILPDVY 274
Query: 116 -----------------VTCNTLLGALCEAGDLSKAKGVMKEMGLK-------------G 145
++CN LL L +A + + G+ G
Sbjct: 275 GYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDDDDGVSVSVRCFFEDLRNFG 334
Query: 146 VELNLHTYRIMLD----GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN----------- 190
N+H Y IM++ + A+I AS + + + P T+
Sbjct: 335 PTPNIHAYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYSTYIKGLCKAGSL 394
Query: 191 -----IICCMCQKGLINEALELMKKI 211
+IC MC+ ++ LE MK I
Sbjct: 395 RVVWKLICNMCELDEASQVLEEMKSI 420
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 26 GMDALYILNQMKQDGIKPDVVCYTIVLS----GIVAEGDYVKLDELFDEMLVLGLIPDVY 81
G+ ++ G P++ YTI+++ + D E+F + G P+V
Sbjct: 145 GVSVRCFFEDLRNFGPTPNIHTYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVV 204
Query: 82 TYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
TY+ YI GLCK + +++ +M + N N ++ LC+ G+L +A V++EM
Sbjct: 205 TYSTYIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEM 264
Query: 142 GLKGVELNLHTYRIMLDG 159
G+ +++ Y + ++
Sbjct: 265 KSIGILPDVYGYYVFVNA 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+K G P + ++ ++ +AL + + + G+ + Y ++ + E
Sbjct: 559 MQKRGIRPDTIACNHILSIYCRKREFNEALALSEEFRDHGVSLNPYSYNEFINKLCRESF 618
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +L ML ++P V Y+ I+ KQ +A+++ M K+G N+ T
Sbjct: 619 PEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTA 678
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + KA + ++M +GV + TY ++ E+ A L + ML++
Sbjct: 679 LIDLCIRNCKIDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGEMIIAKTLFDRMLQEG 738
Query: 181 FYPRSSTFDNII 192
P T+ I
Sbjct: 739 CSPNVVTYSCFI 750
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K+G + T +I ++ + A + M++ G+ PD + Y +++ G+
Sbjct: 664 MTKVGITFNIKTHTALIDLCIRNCKIDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGE 723
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
+ LFD ML G P+V TY+ +IN K + D+A + D M
Sbjct: 724 MIIAKTLFDRMLQEGCSPNVVTYSCFINAYWKLDMRDQAHKWYDEM 769
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLS----GIVAE------------------------- 58
+A +L +MK GI PDV Y + ++ GI +
Sbjct: 256 EASQVLEEMKSIGILPDVYGYYVFVNAKDVGIEVDIMSCNFLLKCLVDANRVGDDDDDDD 315
Query: 59 --GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK----VDEAIQIVDSMIKLGCK 112
G V + F+++ G P+++ Y + +N C+ + + A +I ++ + G
Sbjct: 316 DDGVSVSVRCFFEDLRNFGPTPNIHAYTIMMNFYCRDVRCSADISPASEIFGNIYRSGET 375
Query: 113 PNVVTCNTLLGALCEAG-------------DLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
PNVVT +T + LC+AG +L +A V++EM G+ +++ Y I++D
Sbjct: 376 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDA 435
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQ 197
+ + L E+M P +II +C+
Sbjct: 436 FCKNGDDKKVVDLREDMKLNQIKPSIVNHTSIIHRLCK 473
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M K G P + DF +I L K + ++ A + ++M+Q ++P++ YTI++ G +
Sbjct: 182 MEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQ 241
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ +K+DE+ EM G PDV TY + IN CK K DEAI I M+ P+
Sbjct: 242 NLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYC 301
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
T + L + +A ++ G TY ++ I +A ++ EM +
Sbjct: 302 TFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKEL 361
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
P + T+D I+ + + G EA + +++ +++
Sbjct: 362 GIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSET 397
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 1/218 (0%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV-KLDELFDEM 71
F+ + R V+ + +AL +M++ G+KP + + ++ + +V K ELFD+M
Sbjct: 159 FSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKM 218
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
L P++ +Y + I G +Q + + ++ M G +P+VVT ++ A C+A
Sbjct: 219 RQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKY 278
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A G+ +M K V + H Y + GL + + EA E+ F P + T++ +
Sbjct: 279 DEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAV 338
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
+ C I++A ++ ++ P AR ++ +L+H
Sbjct: 339 VSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVH 376
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 104/282 (36%), Gaps = 71/282 (25%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSG------ 54
MR+ P + +T +I +++ + + +MK DG +PDVV Y I+++
Sbjct: 218 MRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKK 277
Query: 55 --------------------------IVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNV 85
I G+ ++DE F++ G P+ TYN
Sbjct: 278 YDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNA 337
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLG----------------------------------- 110
++ C ++D+A +IV M +LG
Sbjct: 338 VVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSET 397
Query: 111 -CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
C+P+V T ++ C L A V EM KG+ +H + ++ L + ++ +A
Sbjct: 398 GCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDA 457
Query: 170 SLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
++ML P ++ F + G+ N + KK+
Sbjct: 458 CRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVIHFAKKV 499
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
KQ G + + ++ + + + L DEM L+ + T+++ + +
Sbjct: 114 KQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARRYVRAKVI 172
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG-DLSKAKGVMKEMGLKGVELNLHTYRI 155
EA++ + M K G KP + N L+ LC++ + KA+ + +M +E NL +Y I
Sbjct: 173 KEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTI 232
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
+++G + + + + EM F P T+ II C+ +EA+ + +++K+
Sbjct: 233 LIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKN 292
Query: 216 FAPGARAW 223
P +
Sbjct: 293 VNPSPHIY 300
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 15/183 (8%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEMLVLGLIPDVYTYNVYINGLCK 92
M G+ DV Y I+++G K+DE LF+EM +IPDV TYN I+G+CK
Sbjct: 1 MASRGVTHDVSSYNIMINGFCK---IKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICK 57
Query: 93 QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
K+ A+++VD M G P+++T N++L ALC+ + KA ++ ++ +G+ N++T
Sbjct: 58 SGKISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYT 117
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
+ I++DG + LL +M YP + T+ II + K ++A L + I
Sbjct: 118 HTILIDGALA---------LLSKMKDNNCYPNAVTYRIIIRSLFDKNDNDKAERLCEMIP 168
Query: 213 AKS 215
S
Sbjct: 169 IPS 171
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G V + MI K ++ +A+ + +M I PDVV Y ++ GI G
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGK 60
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L DEM G +PD+ TYN +N LCK ++VD+AI ++ + G +PN+ T
Sbjct: 61 ISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTI 120
Query: 121 LL-GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
L+ GAL ++ +M N TYRI++ L K + +A L E
Sbjct: 121 LIDGAL----------ALLSKMKDNNCYPNAVTYRIIIRSLFDKNDNDKAERLCE 165
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 60/122 (49%)
Query: 106 MIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
M G +V + N ++ C+ + +A + +EM K + ++ TY ++DG+ +
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGK 60
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
I A L++EM + P T+++I+ +C+ +++A+ L+ K+ + P
Sbjct: 61 ISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTHTI 120
Query: 226 LL 227
L+
Sbjct: 121 LI 122
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +I + A + ++ + G P+++ T +L + GD K
Sbjct: 5 GIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGDVQKA 64
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ ++ PDV T+N++I+ C Q + EA I+ M+ G KPNVVT + L+
Sbjct: 65 LHFHENIVN----PDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDG 120
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
C ++KAK M GV ++H Y I+++G + EA L EEM K P
Sbjct: 121 YCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPT 180
Query: 185 SSTFDNIICCMCQKGLINEALELMKKI 211
T++ +I +C+ G I+ A +L++++
Sbjct: 181 IVTYNTVIDGLCKSGRISYAWKLVREM 207
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + N M G+ DV Y IV++G + +LF+EM +IP + TYN I+
Sbjct: 130 AKHTFNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVID 189
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
GLCK ++ A ++V M +G + +T N+ L C+ L KA ++KE+ +G+++
Sbjct: 190 GLCKSGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAIALVKEIHNQGIQV 249
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
+L+T +++DGL + +A + +++L K + T+ +I +C
Sbjct: 250 DLYTCSMLIDGLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYMISGLC 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V F I + +A IL M G+KP+VV Y+ ++ G K
Sbjct: 74 PDVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTYSALMDGYCLLNGVNKAKHT 133
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+ M+ +G+ DV+ YN+ ING CK +DEA+ + + M P +VT NT++ LC+
Sbjct: 134 FNTMVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCK 193
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+G +S A +++EM G + TY L ++ +A L++E+ + T
Sbjct: 194 SGRISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAIALVKEIHNQGIQVDLYT 253
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+I + + G + +A ++ K ++ K + ++ ++
Sbjct: 254 CSMLIDGLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYMI 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K+G+ P ++ T +++ L AL+ ++ + PDV + I + +G+
Sbjct: 38 KMGYHPNIITLTTLLKALCLNGDVQKALH----FHENIVNPDVCTFNIFIDEFCLQGNMK 93
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ + M++ G+ P+V TY+ ++G C N V++A ++M+ +G +V N ++
Sbjct: 94 EAKNILGVMMIQGMKPNVVTYSALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNIVI 153
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
C++ + +A + +EM K + + TY ++DGL I A L+ EM
Sbjct: 154 NGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQP 213
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKI 211
T+++ + C+ +++A+ L+K+I
Sbjct: 214 ADEITYNSFLHTFCKNHQLDKAIALVKEI 242
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M +G V ++ +I K + +AL + +M I P +V Y V+ G+ G
Sbjct: 137 MVAVGVAKDVHNYNIVINGFCKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGR 196
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+L EM +G D TYN +++ CK +++D+AI +V + G + ++ TC+
Sbjct: 197 ISYAWKLVREMRDMGQPADEITYNSFLHTFCKNHQLDKAIALVKEIHNQGIQVDLYTCSM 256
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGL 160
L+ L + G L A+ + K++ +KG +++ TY+ M+ GL
Sbjct: 257 LIDGLSKGGRLKDAQQIFKDLLIKGYNVDVVTYKYMISGL 296
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY-TIVLSGIVAEGD 60
R G+ V F+ MI + R DA+ + M G+ P+V+ Y +I+ +G E
Sbjct: 240 RLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGAKGEVS 299
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + + +DEM+ GL+PD TYN ++ + + A +++ M P+V T NT
Sbjct: 300 FDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNT 359
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L LC+AG + A+ V +EM K V N+ TY M+DG + +A L EEM +
Sbjct: 360 YLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRS 419
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSE 238
+++ ++ + G ++EA+E K++ + ALL G Y E
Sbjct: 420 VCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDE 477
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 36/247 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M G P V+ + +I K E D + ++M +G+ PD + Y +LS ++G
Sbjct: 274 MSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKG 333
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT-- 117
+ +L EM ++PDV+TYN Y++ LCK ++D A ++ + M PNVVT
Sbjct: 334 MWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYS 393
Query: 118 ---------------------------------CNTLLGALCEAGDLSKAKGVMKEMGLK 144
NTL+G + G+L +A KEM
Sbjct: 394 AMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERS 453
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ ++ TY +L G E L EEM + YP + T+ +I + + EA
Sbjct: 454 GINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEA 513
Query: 205 LELMKKI 211
+++ ++
Sbjct: 514 MDVYREF 520
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + + + +G V ++ ++S G + +LF M G++P+V TYN I+
Sbjct: 232 ALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIID 291
Query: 89 GLCK-QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
K + D ++ D MI G P+ +T N+LL G A+ ++ EM + +
Sbjct: 292 AGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIV 351
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
++ TY LD L +I A + EEM K +P T+ ++ + L+ +AL L
Sbjct: 352 PDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNL 411
Query: 208 MKKIVAKS 215
+++ +S
Sbjct: 412 YEEMKLRS 419
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ M+ K DAL + +MK + D V Y ++ G+ + E
Sbjct: 387 PNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEK 446
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
EM G+ DV TYN ++G K DE ++ + M PN +T +T++ +
Sbjct: 447 CKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTK 506
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
+A V +E + +E+++ Y ++D L + + +LL M++K P T
Sbjct: 507 GEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVT 566
Query: 188 FDNIICCMCQ 197
F++II Q
Sbjct: 567 FNSIIDASQQ 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
LF+ + G V++++ I+ + + +A+ + SM G PNV+T N+++ A
Sbjct: 235 LFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGA 294
Query: 127 EAGDLSKAKGV--MKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G++S V EM G+ + TY +L K A LL EM +C P
Sbjct: 295 K-GEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPD 353
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ + +C+ G I+ A + +++ +K P + A++
Sbjct: 354 VFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMM 396
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G+ PG + M++ K +AL IL +M+ + +PD + Y +++ V G + +
Sbjct: 338 GYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEG 397
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ D M G++P+ TY IN K D+A+++ M +LGC PNV T N +L
Sbjct: 398 AAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVL 457
Query: 125 LCEAGDLSKAKGVMK---EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
L G S+++ ++K +M L G + T+ ML K + S +L EM F
Sbjct: 458 L---GKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGF 514
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P TF+ +I + G + ++ ++VA F P + ALL
Sbjct: 515 EPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALL 560
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 109/222 (49%), Gaps = 1/222 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + + +++ V+ + +++ M G+ P+ + YT V++ GD K E+
Sbjct: 376 PDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEV 435
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F +M LG +P+V TYN + L K+++ ++ I+I+ M GC P+ +T NT+L E
Sbjct: 436 FGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGE 495
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G V++EM G E + T+ ++ + + + EM+ F P +T
Sbjct: 496 KGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITT 555
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLH 229
++ ++ + ++G A ++ + K F P ++ +LLLH
Sbjct: 556 YNALLNALARRGNWKAAESVVLDMRKKGFKPNETSY-SLLLH 596
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
M+ V+ ++ A +L+ + G++P++V Y ++ GD K +E+ ++ G
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ PDV +YN I G CK+ V EAI+I+ M G +P +T NT + G ++A
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEAD 783
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEA 169
V++ M G N TY+I++DG + + EA
Sbjct: 784 EVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEA 817
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 7/231 (3%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA-LYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M++ G P ++ + M+ K R L +L++M+ G++ D T V+S EG
Sbjct: 263 MKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREG 322
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ FD++ + G P TYN + K EA+ I+ M C+P+ +T N
Sbjct: 323 ILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYN 382
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE---EM 176
L+ A AG + V+ M KGV N TY +++ GKA G+A LE +M
Sbjct: 383 ELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAY-GKA--GDADKALEVFGQM 439
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P T++N++ + ++ + ++++ + P W +L
Sbjct: 440 KELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTML 490
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++LG P V + +++ L K R D + IL MK +G PD + + +L+ +G
Sbjct: 439 MKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGK 498
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ EM G PD T+N I+ + + ++ M+ G P + T N
Sbjct: 499 QKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNA 558
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
LL AL G+ A+ V+ +M KG + N +Y ++L
Sbjct: 559 LLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLL 595
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 35/262 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M GF P + + ++ L + A ++ M++ G KP+ Y+++L G+
Sbjct: 544 MVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGN 603
Query: 61 YVKLD----ELFD----------EMLVL---------------------GLIPDVYTYNV 85
L+ E++D LVL G D+ N
Sbjct: 604 VRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINS 663
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++ + K+++A +++D + G +PN+VT N+L+ GD KA+ ++K++ G
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ +Y ++ G K + EA +L EM P TF+ + C GL EA
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEAD 783
Query: 206 ELMKKIVAKSFAPGARAWEALL 227
E+++ ++ P ++ ++
Sbjct: 784 EVIRYMIEHGCMPNELTYKIVI 805
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
M++ L +E + A + + + + DV T VL G Y + E+F++M G
Sbjct: 208 MVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETG 267
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAI-QIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
L P + TYNV ++ K + I +++D M G + + TC T++ A G L +A
Sbjct: 268 LDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEA 327
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKKCFYPRSSTFDNIIC 193
+ ++ L G + TY ML + GKA + EA +L+EM P + T++ ++
Sbjct: 328 RRFFDDLKLNGYKPGTATYNSMLQ-VFGKAGVYTEALNILKEMEDNNCEPDAITYNELVA 386
Query: 194 CMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ G +E ++ + +K P A + ++
Sbjct: 387 AYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVI 420
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
+ + ++ +GM+ + +Q++ +G K D+V +LS V K E+ D + V G
Sbjct: 631 LTNYKCRQLKGMERAF--HQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSG 688
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
L P++ TYN I+ + +A +++ + G P+VV+ NT++ C+ G + +A
Sbjct: 689 LQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAI 748
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM GV+ T+ + G EA ++ M++ P T+ +I
Sbjct: 749 RILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGY 808
Query: 196 CQKGLINEALELMKKI 211
+ EA++ + KI
Sbjct: 809 IKAKKHKEAMDFVSKI 824
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V+ + +I+ K+ +A+ IL++M +G++P + + +S G + +
Sbjct: 723 GISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEA 782
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
DE+ M+ G +P+ TY + I+G K K EA+ V +
Sbjct: 783 DEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKI 824
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++D ++ L K++ A +Q+K + Y+I+++G GD
Sbjct: 170 MDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLT-TKTYSILINGWGKIGD 228
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K ELFD ML G D+ YN + LCK VDEA+ ++ M+ +P+ T +
Sbjct: 229 SGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSI 288
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
+ + C+A ++ A GV+ +M + N+ TY ++ L ++ EA LL+EM+
Sbjct: 289 FIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSG 348
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + +++ I C +N AL+L+ ++ P + +L
Sbjct: 349 LKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVL 395
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A + + M + G D++ Y +L + G + + ++ML + PD +TY+++I
Sbjct: 232 ARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIR 291
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
C N V A ++D M + PNV T N ++ LC+ + +A ++ EM G++
Sbjct: 292 SYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKP 351
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ +Y + E+ A L+ M K +P T++ ++ + + G ++A E+
Sbjct: 352 DTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVW 411
Query: 209 KKIVAKSFAPGARAWEALL 227
+ + K F P + ++
Sbjct: 412 ECMGDKKFYPSVSTYSVMI 430
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ IR A +L++M++ + P+V Y ++ + + +L
Sbjct: 281 PDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQL 340
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM+ GL PD ++YN C +V+ A++++ M K C P+ T N +L L
Sbjct: 341 LDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIR 400
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLV-GKAEIGEASLLLEEMLKKCFYPRSS 186
G KA V + MG K ++ TY +M+ GL K ++ EA M+ + P +
Sbjct: 401 IGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDT 460
Query: 187 TFD 189
T +
Sbjct: 461 TIE 463
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
D AI+ M + G KP+++ + LL LC+ + +A+ ++ + L TY I+
Sbjct: 161 DGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFL-LTTKTYSIL 219
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++G + G+A L + ML++ + ++N++ +C+ G ++EA++ + +++K
Sbjct: 220 INGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKV 279
Query: 217 APGARAWEALLLHSGSDLTYSETTFAGL 244
P A + ++ + S D + F L
Sbjct: 280 EPDAFTY-SIFIRSYCDANNVHSAFGVL 306
>Medtr2g072170.1 | PPR containing plant-like protein | HC |
chr2:30300092-30302292 | 20130731
Length = 540
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 117/218 (53%), Gaps = 2/218 (0%)
Query: 13 FTDMIRFLVKEERGMD-ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
F ++I+ + + +D A+ +LN+M G P + + VL+ +V Y + +L+
Sbjct: 120 FFNLIKIYAHKAQRIDKAIQLLNEMPNYGTWPSIKTFNFVLNVLVNSKLYDVVFDLYASA 179
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
L LG+ D N+ I GLCK+ +++ A ++ D K+G K N T T++ LCE G +
Sbjct: 180 LKLGVEIDACCLNIMIKGLCKKGEMESAFKVFDEFPKMGLKRNERTFATIMNGLCEKGMV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE-MLKKCFYPRSSTFDN 190
+ G+++ M +G+ +++ Y +++ GLV + E +LE+ M++ YP S++ +
Sbjct: 240 DEGFGLLERMKEEGIVVDVVVYNVLIHGLVKNGRVDEGVTVLEDVMMRNGCYPNESSYQH 299
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
++ + EA +++K+V K F +++ L+L
Sbjct: 300 VLYGLIDLKRFEEAKGVVEKMVLKGFVVSYDSFKGLVL 337
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE---LFDEML 72
MI+ L K+ A + ++ + G+K + + +++G+ +G +DE L + M
Sbjct: 194 MIKGLCKKGEMESAFKVFDEFPKMGLKRNERTFATIMNGLCEKG---MVDEGFGLLERMK 250
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIV-DSMIKLGCKPNVVTCNTLLGALCEAGDL 131
G++ DV YNV I+GL K +VDE + ++ D M++ GC PN + +L L +
Sbjct: 251 EEGIVVDVVVYNVLIHGLVKNGRVDEGVTVLEDVMMRNGCYPNESSYQHVLYGLIDLKRF 310
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+AKGV+++M LKG ++ +++ ++ G + I E + M++ F PR + I
Sbjct: 311 EEAKGVVEKMVLKGFVVSYDSFKGLVLGFCREGLIEEVDWGVRSMVRMGFVPRMGMWRPI 370
Query: 192 ICCM 195
+ C+
Sbjct: 371 VRCI 374
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 7/231 (3%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+GF + + +I L K +AL +L ++ ++ + V Y V+ G+ +
Sbjct: 74 MGFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVND 133
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAI-------QIVDSMIKLGCKPNVV 116
+L+ EM+ + P V TY+ I G C K+ +AI + M+K KPNV
Sbjct: 134 AFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVF 193
Query: 117 TCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
T N+L+ C +++KAK + M GV ++H+Y I+++G EA L EEM
Sbjct: 194 TYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEM 253
Query: 177 LKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P T++++I +C+ G + AL+L+ ++ + P + ++L
Sbjct: 254 HCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSIL 304
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 1 MRKLGFCPGVMDFTDMI--RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M K P V + ++ LVKE A I N M Q G+ PD+ Y I+++G
Sbjct: 183 MMKQDIKPNVFTYNSLMDGYCLVKEVN--KAKSIFNTMAQGGVNPDIHSYNILINGFCKS 240
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ LF+EM LIPDV TYN I+GLCK K A+++VD M G PN++T
Sbjct: 241 KMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITY 300
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAE 165
+++L ALC+ + KA ++ ++ + ++ +HT +++D GK E
Sbjct: 301 SSILNALCKNHQVDKAITLLTKIKDEFSQIFVHTQHLLMD--YGKME 345
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 5/156 (3%)
Query: 21 VKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDV 80
VKE + + A+ MKQD IKP+V Y ++ G + K +F+ M G+ PD+
Sbjct: 173 VKEAKNVFAM----MMKQD-IKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 227
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
++YN+ ING CK DEA+ + + M P+VVT N+L+ LC+ G S A ++ E
Sbjct: 228 HSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDE 287
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
M +G N+ TY +L+ L ++ +A LL ++
Sbjct: 288 MHDRGQPPNIITYSSILNALCKNHQVDKAITLLTKI 323
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIV-------AEGDYVKLD 65
+ +I + K++ DA + ++M I P VV Y+ ++ G A G +
Sbjct: 118 YNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAK 177
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
+F M+ + P+V+TYN ++G C +V++A I ++M + G P++ + N L+
Sbjct: 178 NVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGF 237
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
C++ +A + +EM + + ++ TY ++DGL + A L++EM + P
Sbjct: 238 CKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNI 297
Query: 186 STFDNIICCMCQKGLINEALELMKKI 211
T+ +I+ +C+ +++A+ L+ KI
Sbjct: 298 ITYSSILNALCKNHQVDKAITLLTKI 323
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%)
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G+ P + N+ IN C+ + A I+ ++K G +P+ +T T + LC G + +A
Sbjct: 5 GIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQA 64
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
++ G L+ +Y +++GL E EA LL + K + ++ +I
Sbjct: 65 LHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDG 124
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALLL 228
MC+ +N+A +L ++VAK PG + AL++
Sbjct: 125 MCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALII 158
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M+ GIKP V I+++ G + ++L G PD T +I LC + +
Sbjct: 1 MEFKGIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQ 60
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
+ +A+ D +I +G + V+ TL+ L + G+ +A +++ + K V+LN Y
Sbjct: 61 IHQALHFHDKVIAMGFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNT 120
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK----- 210
++DG+ + +A L EM+ K YP T+ +I C G + +A+ +K+
Sbjct: 121 VIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAKNVF 180
Query: 211 --IVAKSFAPGARAWEALL 227
++ + P + +L+
Sbjct: 181 AMMMKQDIKPNVFTYNSLM 199
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 42/241 (17%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A IL ++ ++G +PD + T + + +G + D+++ +G D +Y IN
Sbjct: 29 AFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLIN 88
Query: 89 GL-----------------------------------CKQNKVDEAIQIVDSMIKLGCKP 113
GL CK V++A + M+ P
Sbjct: 89 GLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDAFDLYSEMVAKRIYP 148
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKE-------MGLKGVELNLHTYRIMLDGLVGKAEI 166
VVT + L+ C G L A G +KE M + ++ N+ TY ++DG E+
Sbjct: 149 GVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEV 208
Query: 167 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+A + M + P +++ +I C+ + +EA+ L +++ + P + +L
Sbjct: 209 NKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSL 268
Query: 227 L 227
+
Sbjct: 269 I 269
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 39/266 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ + K R A+ N+MK G++ + V YT ++SG + VK +
Sbjct: 270 PDVVTLNALVNGMCKIGRVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQY 329
Query: 68 FDEMLVLGLIPDVYTYNVYIN------------------------------GLCKQNKVD 97
FDEML G PD Y I+ G K+ K++
Sbjct: 330 FDEMLSSGCSPDTIVYYSLISSLTIARRMDLSQLKQVGLGLDRTCYYALLSGFRKKKKLE 389
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
+ ++++ M ++ KP+ VT NTL+ L +AGD + A +MKEM +G E ++ Y ++
Sbjct: 390 QVSEMLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAII 449
Query: 158 DGLVGKAEIGEASLLLEEMLKKCF-YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
K +GEA + EEM P + +I +C+ + +A+ LM + KS
Sbjct: 450 HAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMKLKSV 509
Query: 217 APGARA--------WEALLLHSGSDL 234
P W+ +LH +L
Sbjct: 510 RPNTTIYNVILKGLWDKRMLHKAFEL 535
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+LN+M++ +KPD V Y ++S + GD ++ EM+ G P V+ Y I+ C
Sbjct: 394 MLNKMEEIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAIIHAYC 453
Query: 92 KQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
+ V EA++I + M +PN+V L+ ALC+ ++ KA +M +M LK V N
Sbjct: 454 LKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMKLKSVRPNT 513
Query: 151 HTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
Y ++L GL K + +A L++ M++ P T +
Sbjct: 514 TIYNVILKGLWDKRMLHKAFELMDRMVEDACSPDHVTME 552
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 111/222 (50%), Gaps = 9/222 (4%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ + +I +L K + ++M ++ ++PDVV +++G+ G E
Sbjct: 235 PNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEF 294
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F+EM GL + TY I+G C N + +A+Q D M+ GC P+ + +L+ +L
Sbjct: 295 FNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSLISSLTI 354
Query: 128 AG--DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
A DLS+ K V G+ L+ Y +L G K ++ + S +L +M + P +
Sbjct: 355 ARRMDLSQLKQV-------GLGLDRTCYYALLSGFRKKKKLEQVSEMLNKMEEIEVKPDT 407
Query: 186 STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
T++ ++ + + G A ++MK+++ + F P A+ A++
Sbjct: 408 VTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAII 449
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + D I L + + A +L +K+ G + ++L G+ ++ D +
Sbjct: 107 GVFPDMFQLMDFISVLCYKRKNCVAWELLRAVKKLGGTVEATSCNVLLRGLGSQNDIRSM 166
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM------------------ 106
+L EM + + P+V T+++ I+ LCK + DEA+ + D +
Sbjct: 167 YKLLAEMDEMEIRPNVLTFDILIDHLCKARRTDEALGVFDKLRGTLQSWEGRRLLSLLEE 226
Query: 107 IKLGCK--PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA 164
+K+ K PN+VT N L+ LC+AG++ K + M + VE ++ T +++G+
Sbjct: 227 MKVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIG 286
Query: 165 EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWE 224
+ A EM K + T+ +I C I +A++ ++++ +P +
Sbjct: 287 RVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYY 346
Query: 225 ALL 227
+L+
Sbjct: 347 SLI 349
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M ++ P V+ F +I L K R +AL + ++++ G + +
Sbjct: 173 MDEMEIRPNVLTFDILIDHLCKARRTDEALGVFDKLR----------------GTLQSWE 216
Query: 61 YVKLDELFDEMLVLGL-IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+L L +EM V P++ TYN I+ LCK VD+ ++ M + +P+VVT N
Sbjct: 217 GRRLLSLLEEMKVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLN 276
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ +C+ G + A EM KG+E N TY ++ G G I +A +EML
Sbjct: 277 ALVNGMCKIGRVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSS 336
Query: 180 CFYPRSSTFDNIICCM 195
P + + ++I +
Sbjct: 337 GCSPDTIVYYSLISSL 352
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVK 63
GF P V + +I ++ +A+ I +M ++P++V YTI++ + + K
Sbjct: 437 GFEPSVFAYGAIIHAYCLKKNVGEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEK 496
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
L +M + + P+ YNV + GL + + +A +++D M++ C P+ VT L
Sbjct: 497 AVSLMGDMKLKSVRPNTTIYNVILKGLWDKRMLHKAFELMDRMVEDACSPDHVTMEILTE 556
Query: 124 ALCEAGDLSKAK 135
L G++ K K
Sbjct: 557 WLSAVGEIEKLK 568
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C V+ T ++ L+++ + +A+ I N + ++G KP ++ YT +++ + + +
Sbjct: 40 CQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPS 99
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L ++ G+ PD +N IN KV EA++I M + GCKP T NTL+
Sbjct: 100 LLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFG 159
Query: 127 EAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
G +A +++ M G V+ N TY I++ K E+ EA ++ +M+ P
Sbjct: 160 IVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDI 219
Query: 186 STFDNIICCMCQKGLINEALELMKKI 211
T++ + Q G + A L+ K+
Sbjct: 220 VTYNTLARAFAQNGETDNAERLILKM 245
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 1 MRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M++LG P + F +I+ + + G++ L M++ GIKPDVV Y+ +++ +
Sbjct: 282 MKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTL--MEEFGIKPDVVTYSTIMNAWSSS 339
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G +E+FD+M+ + PD+ Y++ G + + D+A +++SM K G + NVV
Sbjct: 340 GLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIF 399
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
T++ C AG + A + ++M G LNL TY ++ G + +A LL M +
Sbjct: 400 TTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEE 459
Query: 179 KCFYPRSSTFD 189
P ST +
Sbjct: 460 SGVAPEMSTIE 470
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +T ++ L + +R +L++++++G+KPD + + +++ G +
Sbjct: 73 GHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEA 132
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLG 123
++F +M G P T+N I G + EA+++++ MI+ G KPN T N L+
Sbjct: 133 MKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQ 192
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK--KCF 181
A C +L +A VM +M G++ ++ TY + E A L+ +M +
Sbjct: 193 AWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKV 252
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T II C++G + EAL + K+ P + +L+
Sbjct: 253 KPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLI 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 2/229 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ--DGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + + R + +A ++ +M+Q + +KP+ I++ G EG+
Sbjct: 214 GMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMT 273
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +M LG+ P+ +N I G D + + M + G KP+VVT +T++
Sbjct: 274 EALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIM 333
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A +G + + + +M +E ++ Y I+ G V + +A LL M K
Sbjct: 334 NAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQ 393
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
F II C G ++ AL L +K+ + +E L+ G
Sbjct: 394 ANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYG 442
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
L ++ K EA+ I +S+ + G KP ++T TL+ AL + ++ ++ GV+ +
Sbjct: 53 LIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPD 112
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ M++ ++ EA + +M + P +STF+ +I G +EA++L++
Sbjct: 113 SILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLE 172
Query: 210 KIVAK-SFAPGARAWEALL 227
++ + P R + L+
Sbjct: 173 MMIQDGNVKPNERTYNILI 191
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 7 CPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDE 66
C V+ T ++ L+++ + +A+ I N + ++G KP ++ YT +++ + + +
Sbjct: 40 CQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPS 99
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
L ++ G+ PD +N IN KV EA++I M + GCKP T NTL+
Sbjct: 100 LLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFG 159
Query: 127 EAGDLSKAKGVMKEMGLKG-VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRS 185
G +A +++ M G V+ N TY I++ K E+ EA ++ +M+ P
Sbjct: 160 IVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDI 219
Query: 186 STFDNIICCMCQKGLINEALELMKKI 211
T++ + Q G + A L+ K+
Sbjct: 220 VTYNTLARAFAQNGETDNAERLILKM 245
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 1 MRKLGFCPGVMDFTDMIR--FLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
M++LG P + F +I+ + + G++ L M++ GIKPDVV Y+ +++ +
Sbjct: 282 MKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTL--MEEFGIKPDVVTYSTIMNAWSSS 339
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
G +E+FD+M+ + PD+ Y++ G + + D+A +++SM K G + NVV
Sbjct: 340 GLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIF 399
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
T++ C AG + A + ++M G LNL TY ++ G + +A LL M +
Sbjct: 400 TTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEE 459
Query: 179 KCFYPRSSTFD 189
P ST +
Sbjct: 460 SGVAPEMSTIE 470
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P ++ +T ++ L + +R +L++++++G+KPD + + +++ G +
Sbjct: 73 GHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEA 132
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCNTLLG 123
++F +M G P T+N I G + EA+++++ MI+ G KPN T N L+
Sbjct: 133 MKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQ 192
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK--KCF 181
A C +L +A VM +M G++ ++ TY + E A L+ +M +
Sbjct: 193 AWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKV 252
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T II C++G + EAL + K+ P + +L+
Sbjct: 253 KPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLI 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 2/229 (0%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQ--DGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + + R + +A ++ +M+Q + +KP+ I++ G EG+
Sbjct: 214 GMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMT 273
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
+ +M LG+ P+ +N I G D + + M + G KP+VVT +T++
Sbjct: 274 EALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIM 333
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A +G + + + +M +E ++ Y I+ G V + +A LL M K
Sbjct: 334 NAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQ 393
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
F II C G ++ AL L +K+ + +E L+ G
Sbjct: 394 ANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYG 442
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
L ++ K EA+ I +S+ + G KP ++T TL+ AL + ++ ++ GV+ +
Sbjct: 53 LIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPD 112
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ M++ ++ EA + +M + P +STF+ +I G +EA++L++
Sbjct: 113 SILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLE 172
Query: 210 KIVAK-SFAPGARAWEALL 227
++ + P R + L+
Sbjct: 173 MMIQDGNVKPNERTYNILI 191
>Medtr8g463610.1 | PPR containing plant-like protein | HC |
chr8:22423507-22425972 | 20130731
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 10/180 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + MIR L KE R +A +L++M Q G+ PD CY V+ G+ G
Sbjct: 1 MFKEGIVPDVVLYAIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVIQGLCDVGL 60
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L E+ +V T+ + I +CK+ V EA ++ + M KLGC+P+VVT NT
Sbjct: 61 LNRAHSLLLEISE----HNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNT 116
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ LC+A +L KAK + ++ + G L+LH L G ++ +++ LL++ + C
Sbjct: 117 LINGLCKANNLEKAKILFCKLEV-GRRLSLH-----LSLSQGSGQVSDSARLLKKAKEMC 170
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M G++PDV Y + I GL K+ +V EA +++D M ++G P+ N ++ LC+ G
Sbjct: 1 MFKEGIVPDVVLYAIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVIQGLCDVGL 60
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
L++A ++ E+ E N+ T+ I++ + + + EA L +M K P TF+
Sbjct: 61 LNRAHSLLLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNT 116
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGS 232
+I +C+ + +A KI+ G R L L GS
Sbjct: 117 LINGLCKANNLEKA-----KILFCKLEVGRRLSLHLSLSQGS 153
>Medtr2g022860.1 | membrane-associated salt-inducible protein | HC |
chr2:7962191-7960482 | 20130731
Length = 399
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 2/220 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V + +I+ + IL++M + +KP+VV +SG E + ++ +L
Sbjct: 172 PDVETYNLVIKSFAESGLSNSVFSILDEMDRSNVKPNVVTINNAISGFYNEKKFDEVGKL 231
Query: 68 FDEML-VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
+ M L P + TYNV I LCK + +EA + MI G KPN V+ L+ C
Sbjct: 232 LNLMEERYKLYPSLSTYNVRIQSLCKLKRSNEAKALFQGMITSGRKPNSVSYYHLMNGFC 291
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
G+L +AKG+ +M +G +++ Y ++ L E A + +E + K + P +
Sbjct: 292 REGNLEEAKGLFADMKKRGFKVDGQCYFTLVYFLCEGDEFEWALDIAKECIAKGWVPNFT 351
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
T ++ + +++A EL+K+I K FA + W+ +
Sbjct: 352 TMKKLVNGLVGVSKVDDAKELIKEIKEK-FAEKSDRWDEI 390
>Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:21455804-21456661 | 20130731
Length = 260
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV-- 73
+I L K A+++L Q +++ + +VV Y ++ + E +LF+EM++
Sbjct: 35 LINALCKRRETGAAVFLLRQAERENVSLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKY 94
Query: 74 -LGLIPDVYTYNVYIN----------GLCKQNKVDEAIQIVDSM-IKLGCKPNVVTCNTL 121
L+PDV TY+ IN LCK+ V+EA ++D M +++G +P+V N+
Sbjct: 95 NTSLLPDVVTYSPLINDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSF 154
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ + AK + M +GV N+H Y +M+ GL + EA L EEM K
Sbjct: 155 IDGCFPSNQPDMAKDIFDSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNM 214
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
P + + +II + + G AL+L+ ++ K
Sbjct: 215 TPDAKIYTSIIDGLFKSGRDTCALKLVGEMHDK 247
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQM---KQDGIKPDVVCYT----------IVLSGI 55
V+ + +I L KE R DA + N+M + PDVV Y+ I++ +
Sbjct: 63 NVVTYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTYSPLINDVYTFGIMVEAL 122
Query: 56 VAEGDYVKLDELFDEMLV-LGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPN 114
EG+ + + DEM+V +G+ PDV +N +I+G N+ D A I DSM + G PN
Sbjct: 123 CKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKDIFDSMDQRGVVPN 182
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
+ ++ LC+ + +A + +EM K + + Y ++DGL A L+
Sbjct: 183 IHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLFKSGRDTCALKLVG 242
Query: 175 EMLKK 179
EM K
Sbjct: 243 EMHDK 247
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMK-QDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
V F M+ L KE +A ++++M Q G++PDV + + G ++F
Sbjct: 112 VYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKDIF 171
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
D M G++P+++ Y + I GLCK +VDEA+ + + M P+ +++ L ++
Sbjct: 172 DSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLFKS 231
Query: 129 GDLSKAKGVMKEMGLKGVELNLHT 152
G + A ++ EM KG+ N+ T
Sbjct: 232 GRDTCALKLVGEMHDKGLPTNVFT 255
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 98/234 (41%), Gaps = 52/234 (22%)
Query: 52 LSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC 111
+ G+ G E ++++ G D TY IN LCK+ + A+ ++ +
Sbjct: 1 MKGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAERENV 60
Query: 112 KPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK-GVEL------------NLHTYRIMLD 158
NVVT N ++ +LC+ ++ A + EM LK L +++T+ IM++
Sbjct: 61 SLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTYSPLINDVYTFGIMVE 120
Query: 159 GLVGKAEIGEASLLLEEMLKK----------------CF--------------------Y 182
L + + EA ++++EM+ + CF
Sbjct: 121 ALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKDIFDSMDQRGVV 180
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSGSD 233
P + +I +C+ ++EAL L +++ +K+ P A+ + ++ L SG D
Sbjct: 181 PNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLFKSGRD 234
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G C V + +I K R A + +M + GI+PDVV +T+++ + +G
Sbjct: 316 MQSKGVCDAV-SYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGG 374
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++L EM + ++PDV Y ++ CK +D+A + M++ G P+VV+ N
Sbjct: 375 SNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYNA 434
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ C+A + A + +EM +KG++ + T+ +++ L+ +I EA + ++M++K
Sbjct: 435 IINGFCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKISEAYRVWDQMMEKG 494
Query: 181 F 181
F
Sbjct: 495 F 495
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
LY++N+M+ G+ D V Y ++ + EL++EM G+ PDV T+ V I
Sbjct: 310 LYMVNKMQSKGV-CDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKA 368
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
++ + A +++ M + P+V+ T++ C++G++ KA GV +M GV +
Sbjct: 369 FLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPD 428
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
+ +Y +++G + + A L EEM K P TF+ I+ + Q I+EA +
Sbjct: 429 VVSYNAIINGFCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKISEAYRVWD 488
Query: 210 KIVAKSFA 217
+++ K F
Sbjct: 489 QMMEKGFT 496
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V+ FT +I+ +++ A +L +MK I PDV+ YT V+ G+
Sbjct: 350 MCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGN 409
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +F +M+ G+ PDV +YN ING CK ++V A ++ + M G P+ VT N
Sbjct: 410 IDKAYGVFCDMVENGVSPDVVSYNAIINGFCKASRVMGAWRLYEEMQVKGLDPDEVTFNL 469
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK 163
++G L + +S+A V +M KG LN I+++ + +
Sbjct: 470 IVGVLIQGNKISEAYRVWDQMMEKGFTLNGDLSNILVNAVQSR 512
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M LG P + F + L +E R AL + M G KPDVV YTI++ +
Sbjct: 106 MDDLGIVPDIWAFNIYLNILCRENRLETALQLFQTMPLKGRKPDVVSYTIIIDALCKVKR 165
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ++ ++ +++ GL PD + GLC VD A ++V +I G + N + N
Sbjct: 166 FDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNA 225
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM 176
L+ + G KA+ + M G +L TY I+L+ + + EA L+E M
Sbjct: 226 LIHGFYKMGKKDKAEAIRGFMSKNGCAPDLVTYNILLNYGCDEVTVDEAERLVETM 281
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L M GI PD+ + I L+ + E +LF M + G PDV +Y + I+ LC
Sbjct: 102 LLRDMDDLGIVPDIWAFNIYLNILCRENRLETALQLFQTMPLKGRKPDVVSYTIIIDALC 161
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K + DE + + +I G KP+ C L+ LC G + A ++ + GVE+N
Sbjct: 162 KVKRFDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCL 221
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y ++ G + +A + M K P T++ ++ C + ++EA L++ +
Sbjct: 222 VYNALIHGFYKMGKKDKAEAIRGFMSKNGCAPDLVTYNILLNYGCDEVTVDEAERLVETM 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M ++G PD+V Y I+L+ E + + L + M G+ D+Y+YN + CK +
Sbjct: 246 MSKNGCAPDLVTYNILLNYGCDEVTVDEAERLVETMERSGM-ADLYSYNELLKAFCKAYQ 304
Query: 96 VDEA-IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYR 154
VD A + +V+ M G + V+ NT++ A C+ +A + +EM KG++ ++ T+
Sbjct: 305 VDRAYLYMVNKMQSKGV-CDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFT 363
Query: 155 IMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+++ + K A+ LL EM P + ++ C+ G I++A + +V
Sbjct: 364 VLIKAFLRKGGSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVEN 423
Query: 215 SFAPGARAWEALL 227
+P ++ A++
Sbjct: 424 GVSPDVVSYNAII 436
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 3/217 (1%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+ I + VK A+ + ++M Q + + Y + G++ ++ L E +
Sbjct: 12 YRSTISYYVKSGLIDTAIQLFDEMSQSNCRLFSIDYNRFI-GVLLRHSHLNLAENYYHHH 70
Query: 73 VL--GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
V+ G +TY+ +I LC ++ M LG P++ N L LC
Sbjct: 71 VIPNGFSLTPFTYSRFITALCSVKNFLLIESLLRDMDDLGIVPDIWAFNIYLNILCRENR 130
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
L A + + M LKG + ++ +Y I++D L E + +++ P
Sbjct: 131 LETALQLFQTMPLKGRKPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAA 190
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
++ +C G ++ A EL+ +++ + AL+
Sbjct: 191 LVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALI 227
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 2 RKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDY 61
++ GF P V + + I ++ +L +M+ +G P+ V YTI+L G G
Sbjct: 299 KEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQL 358
Query: 62 VKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTL 121
K E ++ M G++PD Y+ + L K ++ +A ++ D M K G +VVT NT+
Sbjct: 359 SKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTM 418
Query: 122 LGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF 181
+ C A ++KEM + +L TY +L K + LL+ M K
Sbjct: 419 ISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDL 478
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
P T+ ++ + G + EA +++V+K F P
Sbjct: 479 CPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTP 515
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P + +T ++ K + AL +MK+DGI PD Y+ ++ + G
Sbjct: 333 MRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGR 392
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E+FD+M G++ DV TYN I+ C +K + A++++ M + CKP++ T +
Sbjct: 393 LKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHP 452
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL C+ + K ++ M + + TY +++ L ++ EA EEM+ K
Sbjct: 453 LLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKG 512
Query: 181 FYPRSST 187
F P +T
Sbjct: 513 FTPMETT 519
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 47 CYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
+ I+++G ++ K ++ +E G PDV+TYN +I C + ++++ M
Sbjct: 274 SFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEM 333
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-E 165
GC PN VT LL +AG LSKA + M G+ + Y ++ ++GKA
Sbjct: 334 RGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLM-YILGKAGR 392
Query: 166 IGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
+ +A + ++M K+ T++ +I C AL L+K++ S P + +
Sbjct: 393 LKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHP 452
Query: 226 LL 227
LL
Sbjct: 453 LL 454
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 35/239 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + MI+ K + A+ ++ +M+ ++PDVV Y V+ AEGD L
Sbjct: 245 PDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSL 304
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK--------------- 112
+ EM G + Y++ I GLCK KV E + ++MI+ GCK
Sbjct: 305 YHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGK 364
Query: 113 --------------------PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
P+ VT + ++ LC++G + +A + GV +N
Sbjct: 365 SGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVF 424
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y ++DGL + EA + +EM +K P S ++ +I +C+ G I++AL L+K++
Sbjct: 425 YSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRM 483
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
L++ M + I+P + Y +L+G+V + +FD M PDV TYN I G
Sbjct: 197 LFVWRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKG 256
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK K +AI++V M + +P+VV+ T++ A GD+ + EM KG E+
Sbjct: 257 YCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVP 316
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
H Y +++ GL ++ E L E M++ + + +I C + G + AL L +
Sbjct: 317 SHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFE 376
Query: 210 KIVAKSFAPGARAWEALL 227
++ P + A++
Sbjct: 377 RMKMDGIEPDEVTYSAIV 394
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + ++ ++ L K R +AL ++G+ + V Y+ ++ G+ G
Sbjct: 378 MKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGR 437
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +++FDEM G PD Y YN I+GLCK ++D+A+ +V M + GC+ V T
Sbjct: 438 VDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTI 497
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L +A + M KG+ N+ +R + GL ++ A +L+E+
Sbjct: 498 LISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMG 557
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ ++++I +C+ G + EA +L IV +
Sbjct: 558 VV-LETAYEDMIGALCKAGRVKEACKLADGIVDR 590
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L K + ++ + M ++G K + YT ++ G+ LF+ M + G+ PD
Sbjct: 327 LCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPD 386
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
TY+ +NGLCK +V+EA+ + G N V ++L+ L +AG + +A+ V
Sbjct: 387 EVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFD 446
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
EM KG + + Y ++DGL I +A L++ M + TF +I + +
Sbjct: 447 EMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILISELFRVH 506
Query: 200 LINEALELMKKIVAKSFAPGARAWEAL 226
EA+++ ++ K P + AL
Sbjct: 507 RNEEAVKMWDLMIDKGITPNVACFRAL 533
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 35/239 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ + MI+ K + A+ ++ +M+ ++PDVV Y V+ AEGD L
Sbjct: 245 PDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSL 304
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK--------------- 112
+ EM G + Y++ I GLCK KV E + ++MI+ GCK
Sbjct: 305 YHEMEDKGFEVPSHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGK 364
Query: 113 --------------------PNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT 152
P+ VT + ++ LC++G + +A + GV +N
Sbjct: 365 SGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVF 424
Query: 153 YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y ++DGL + EA + +EM +K P S ++ +I +C+ G I++AL L+K++
Sbjct: 425 YSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRM 483
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%)
Query: 30 LYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYING 89
L++ M + I+P + Y +L+G+V + +FD M PDV TYN I G
Sbjct: 197 LFVWRGMNEQNIQPSLFTYNSLLNGLVGSCFIESAERVFDAMKEGRTKPDVVTYNTMIKG 256
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
CK K +AI++V M + +P+VV+ T++ A GD+ + EM KG E+
Sbjct: 257 YCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLSLYHEMEDKGFEVP 316
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
H Y +++ GL ++ E L E M++ + + +I C + G + AL L +
Sbjct: 317 SHGYSLVICGLCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFE 376
Query: 210 KIVAKSFAPGARAWEALL 227
++ P + A++
Sbjct: 377 RMKMDGIEPDEVTYSAIV 394
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + ++ ++ L K R +AL ++G+ + V Y+ ++ G+ G
Sbjct: 378 MKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGR 437
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +++FDEM G PD Y YN I+GLCK ++D+A+ +V M + GC+ V T
Sbjct: 438 VDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTI 497
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ L +A + M KG+ N+ +R + GL ++ A +L+E+
Sbjct: 498 LISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVLDELAPMG 557
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAK 214
+ ++++I +C+ G + EA +L IV +
Sbjct: 558 VV-LETAYEDMIGALCKAGRVKEACKLADGIVDR 590
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
L K + ++ + M ++G K + YT ++ G+ LF+ M + G+ PD
Sbjct: 327 LCKMGKVLEGYALFENMIRNGCKGNKAVYTALIDCYGKSGNSDGALRLFERMKMDGIEPD 386
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMK 139
TY+ +NGLCK +V+EA+ + G N V ++L+ L +AG + +A+ V
Sbjct: 387 EVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVFYSSLIDGLGKAGRVDEAEKVFD 446
Query: 140 EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKG 199
EM KG + + Y ++DGL I +A L++ M + TF +I + +
Sbjct: 447 EMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQTVYTFTILISELFRVH 506
Query: 200 LINEALELMKKIVAKSFAPGARAWEAL 226
EA+++ ++ K P + AL
Sbjct: 507 RNEEAVKMWDLMIDKGITPNVACFRAL 533
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
GV F ++R L +E+ DA + + +K + +P++ + I+LSG D ELF
Sbjct: 164 GVNCFNALLRTLCQEKSMTDARNVYHSLKHN-FRPNLQTFNILLSGWKNVED----AELF 218
Query: 69 -DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EM +G+ PDV TYN ++ CK ++++A ++ D M + P+V+T +++G L
Sbjct: 219 VNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGL 278
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
G KA+ V+KEM GV ++ Y + +G A L++EM+ K P ++T
Sbjct: 279 VGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATT 338
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARA 222
++ + + L K+++ + P ++
Sbjct: 339 YNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQS 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+++G P V+ + ++ K A + ++M++ + PDV+ YT V+ G+ G
Sbjct: 222 MKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQ 281
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K ++ EM G+ PDV YN I C ++ A ++VD M+ G PN T N
Sbjct: 282 PDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNL 341
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLKK 179
+ DL + + K M +G L + L L + E E +L L EM++K
Sbjct: 342 FFRVFYWSNDLQSSWNLYKRMMGEGC-LPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEK 400
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPG 219
F + D + +C G + EA + +++ K P
Sbjct: 401 GFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPS 440
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 41 IKPD--VVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDE 98
I PD V C+ +L + E ++ L P++ T+N+ ++G V++
Sbjct: 159 IVPDYGVNCFNALLRTLCQEKSMTDARNVYHS-LKHNFRPNLQTFNILLSGW---KNVED 214
Query: 99 AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD 158
A V+ M ++G +P+VVT N+L+ C+ ++ KA V EM K + ++ TY ++
Sbjct: 215 AELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIG 274
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
GL + +A +L+EM + YP ++ I C + A EL+ ++V K +P
Sbjct: 275 GLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSP 334
Query: 219 GARAWEALL--LHSGSDLTYS 237
A + + +DL S
Sbjct: 335 NATTYNLFFRVFYWSNDLQSS 355
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ P V+ +T +I L + A +L +MK+ G+ PDV Y +
Sbjct: 257 MREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKR 316
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
EL DEM+ GL P+ TYN++ N + + + M+ GC P +C
Sbjct: 317 LGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMF 376
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ + A + EM KG ++ D L ++ EA EM++K
Sbjct: 377 LIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKG 436
Query: 181 FYPRSSTFDNIICCM 195
P + +F I M
Sbjct: 437 QRPSNVSFKRIKVLM 451
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 76
IRFL E + A ++ +M + G+ PDV + +++G+ G D L +ML G
Sbjct: 118 IRFLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGP 177
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK- 135
P+ TYN I G + ++A + +M G +PN VTCN ++ ALCE G L KA+
Sbjct: 178 HPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARN 237
Query: 136 -------------------------------------GVMKEMGLKGVELNLHTYRIMLD 158
G+ EM K ++++ Y ++++
Sbjct: 238 MLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLIN 297
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ ++ A EMLKK P T++ +I +C++G I+EA
Sbjct: 298 GVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEA 343
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V + +I L KE + +A Y+ M + I PD + Y +++ G+ GD
Sbjct: 315 MLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGD 374
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +L ML ++P +N+ I+ + + A D M+ G PNV T N
Sbjct: 375 VLRAKDLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNA 434
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A ++G++ A + +EM K + ++ TY +++ G + ++ A L +EM+++
Sbjct: 435 LILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRG 494
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
P T I C G I EA E +I+
Sbjct: 495 REPDLITCTEFIRGYCIIGNIEEAEERYARIL 526
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 38/265 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V ++ L + R +A +++ QM + G P+ + Y ++ G A +
Sbjct: 137 MMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHN 196
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLC----------------------------- 91
K D+LF M G+ P+ T N+ + LC
Sbjct: 197 TEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVA 256
Query: 92 ---------KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
K K ++A+ + + MI+ K +VV N L+ +C + A G EM
Sbjct: 257 STTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEML 316
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
KG+ ++ TY I++ L + +I EA L M K P ++ +I +C G +
Sbjct: 317 KKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVL 376
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
A +L+ ++ P A W ++
Sbjct: 377 RAKDLLLCMLNNFMVPQAIIWNLII 401
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + +I +K +A + +M+ ++PDVV Y +++ G + GD
Sbjct: 424 GVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLA 483
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM+ G PD+ T +I G C ++EA + ++K G + V L
Sbjct: 484 HQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILFNK 543
Query: 125 LCEAGDLSKA 134
C+ G+ +A
Sbjct: 544 YCKLGEPIRA 553
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 76
IRFL E + A ++ +M + G+ PDV + +++G+ G D L +ML G
Sbjct: 137 IRFLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGP 196
Query: 77 IPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK- 135
P+ TYN I G + ++A + +M G +PN VTCN ++ ALCE G L KA+
Sbjct: 197 HPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARN 256
Query: 136 -------------------------------------GVMKEMGLKGVELNLHTYRIMLD 158
G+ EM K ++++ Y ++++
Sbjct: 257 MLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLIN 316
Query: 159 GLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ ++ A EMLKK P T++ +I +C++G I+EA
Sbjct: 317 GVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEA 362
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V + +I L KE + +A Y+ M + I PD + Y +++ G+ GD
Sbjct: 334 MLKKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGD 393
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++ +L ML ++P +N+ I+ + + A D M+ G PNV T N
Sbjct: 394 VLRAKDLLLCMLNNFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNA 453
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A ++G++ A + +EM K + ++ TY +++ G + ++ A L +EM+++
Sbjct: 454 LILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLAHQLCDEMVQRG 513
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
P T I C G I EA E +I+
Sbjct: 514 REPDLITCTEFIRGYCIIGNIEEAEERYARIL 545
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 38/265 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P V ++ L + R +A +++ QM + G P+ + Y ++ G A +
Sbjct: 156 MMEKGVLPDVYTHNHIVNGLCENGRMENADFLVRQMLKSGPHPNCITYNTLIKGYYAVHN 215
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLC----------------------------- 91
K D+LF M G+ P+ T N+ + LC
Sbjct: 216 TEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVA 275
Query: 92 ---------KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMG 142
K K ++A+ + + MI+ K +VV N L+ +C + A G EM
Sbjct: 276 STTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVVAYNVLINGVCRNQQMHLAYGYACEML 335
Query: 143 LKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLIN 202
KG+ ++ TY I++ L + +I EA L M K P ++ +I +C G +
Sbjct: 336 KKGLIPDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVL 395
Query: 203 EALELMKKIVAKSFAPGARAWEALL 227
A +L+ ++ P A W ++
Sbjct: 396 RAKDLLLCMLNNFMVPQAIIWNLII 420
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + +I +K +A + +M+ ++PDVV Y +++ G + GD
Sbjct: 443 GVLPNVFTYNALILAQLKSGNIHNAHSLKEEMRTKNLRPDVVTYNLLIGGAINIGDLDLA 502
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L DEM+ G PD+ T +I G C ++EA + ++K G + V L
Sbjct: 503 HQLCDEMVQRGREPDLITCTEFIRGYCIIGNIEEAEERYARILKSGLWSDHVPVQILFNK 562
Query: 125 LCEAGDLSKA 134
C+ G+ +A
Sbjct: 563 YCKLGEPIRA 572
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + GF P V+ + + + +A+ +LN M+ G++P+ + I++ G+ + G
Sbjct: 461 MEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGK 520
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLC------KQNKVDEAIQIVDSMIKLGCKPN 114
+ +E F+ + + V Y +NG C K +++ EA ++ +M+++ KP+
Sbjct: 521 VEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPS 580
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
V + + ALC G++ A + G + TY IM++G + EA L +
Sbjct: 581 KVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFK 640
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL---LLHSG 231
+M ++ P + T+ +I C+ + EA EL K + + P A+ + LL+SG
Sbjct: 641 DMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSG 700
Query: 232 SDLTYSETTFAGLFNQ 247
++E F L+N+
Sbjct: 701 ----HTEIAFQ-LYNE 711
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 6/206 (2%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ +L+++K + D+ YT +++G +G ++ LF EM G PDV YNV
Sbjct: 418 DAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLA 477
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
G + EA+ +++ M G +PN T ++ LC AG + +A+ + + VE
Sbjct: 478 AGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVE 537
Query: 148 LNLHTYRIMLDG-----LVGKA-EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLI 201
+++ Y +++G L+ K+ E+ EA +LL ML+ P + I +C G +
Sbjct: 538 ISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNM 597
Query: 202 NEALELMKKIVAKSFAPGARAWEALL 227
A L + F P A + ++
Sbjct: 598 EGAHTLFNLFIHTGFTPDAVTYTIMI 623
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V + ++ AL + M GIK + V ++ +L + G
Sbjct: 321 MEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGR 380
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+++ ++F+E GL D YN+ + LCK KVD+A+ ++D + + ++ T
Sbjct: 381 ALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTT 440
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ G +A+ + KEM +G + ++ Y ++ G EA LL M +
Sbjct: 441 LINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQG 500
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S+T II +C G + EA E + +S + AL+
Sbjct: 501 VEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALV 547
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A +L M + +KP V Y+ + + + G+ LF+ + G PD TY + I
Sbjct: 564 EAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMI 623
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
NG CK N + EA ++ M + G P+ VT ++ C+ L +A + K+M +G++
Sbjct: 624 NGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIK 683
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
++ Y +++ GL+ A L EM+
Sbjct: 684 PDVIAYTVIIKGLLNSGHTEIAFQLYNEMI 713
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ F +I LVK + AL + + K G+ + YTIV+ + +GD+ + +
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
FDEM G+ D Y Y +I GLCK N+ D ++ + ++ C
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCN 307
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
L +A+ V EM +G+ +++ Y ++ G +A + + M+ +
Sbjct: 308 ETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVI 367
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
F I+ C+ + G E +++ ++ +A+ L
Sbjct: 368 FSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILF 407
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 35/261 (13%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG- 59
+ G +T +I+ L K+ + + + ++MK+ G+ D CY + G+
Sbjct: 216 FKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNR 275
Query: 60 ---------DY----------------------VKLDE---LFDEMLVLGLIPDVYTYNV 85
DY KLDE +F EM GL+PDVY Y
Sbjct: 276 SDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCA 335
Query: 86 YINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKG 145
++G C D+A+ + SMI G K N V + +L L E G + + +E G
Sbjct: 336 LVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESG 395
Query: 146 VELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
+ ++ Y I+ D L ++ +A +L+E+ + +I +G EA
Sbjct: 396 LFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQ 455
Query: 206 ELMKKIVAKSFAPGARAWEAL 226
L K++ + F P A+ L
Sbjct: 456 SLFKEMEERGFKPDVVAYNVL 476
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + +T MI K +A + MK+ GI PD V YTI+++G +
Sbjct: 611 GFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREA 670
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKP 113
ELF +M G+ PDV Y V I GL + A Q+ + MI +G P
Sbjct: 671 HELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTP 719
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 13 FTDMIRFLVKEERGMDAL-YILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEM 71
F ++ V + ++A+ ++L K I P+++ + +++ +V + LF
Sbjct: 157 FNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRF 216
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
GLI + YTY + I LCK+ + +++ D M + G + T + LC+
Sbjct: 217 KSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRS 276
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
V+++ + ++ + Y ++ G + ++ EA + EM K+ P + +
Sbjct: 277 DLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCAL 336
Query: 192 ICCMCQKGLINEALELMKKIVAK 214
+ C ++AL + K ++++
Sbjct: 337 VHGYCNSRNFDKALAVYKSMISR 359
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD--ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + ++ RGM+ AL + N++KQ+G +PDVV YT +L+
Sbjct: 357 GLKPNIVSYNALLGAYAA--RGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 414
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K E+F + L P++ +YN I+ +++AI+I+ M + PNVV+ TLL
Sbjct: 415 KAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLL 474
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A G K V+ ++G++LN Y + + E +A L M KK
Sbjct: 475 AACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIK 534
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIV 212
S T+ +I C+ EAL M++++
Sbjct: 535 SDSVTYTVLISGCCKMSKFGEALSFMEEMM 564
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 2/235 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + ++I +AL + +M +G+ PD+V + I+L+ +
Sbjct: 211 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQ 270
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM--IKLGCKPNVVTC 118
Y K F+ + + PD T+N+ I+ L K + D+A+ I +SM K C P+VVT
Sbjct: 271 YSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTF 330
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ G + + M +G++ N+ +Y +L + EA + E+ +
Sbjct: 331 TSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQ 390
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
F P ++ +++ + +A E+ K I + P ++ AL+ GS+
Sbjct: 391 NGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSN 445
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTIVLSGIVAEGDYVKLD 65
P +I LVK ++ A+ I N MK+ + PDVV +T ++ G +
Sbjct: 288 PDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCE 347
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
F+ ML GL P++ +YN + + +EA+Q+ + + + G +P+VV+ +LL A
Sbjct: 348 AAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAY 407
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ KA+ + K + ++ N+ +Y ++D + +A +L EM + +P
Sbjct: 408 GRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHP 465
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 4/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
+C + MIR + R A + +M++ KPD Y +++ G +
Sbjct: 145 NYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWA 204
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ D+ML + P TYN IN EA+ + M G P++VT N +L A
Sbjct: 205 MNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTA 264
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK---CF 181
SKA + + + + T+ I++ LV + +A + M +K C
Sbjct: 265 FKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSEC- 323
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P TF ++I G I ++A+ P ++ ALL
Sbjct: 324 HPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALL 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L+ + GIK + V Y + + G+Y K +L++ M + D TY V I+G C
Sbjct: 489 VLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCC 548
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K +K EA+ ++ M+ L + ++++ A + G + +A+ M G ++
Sbjct: 549 KMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVV 608
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEM 176
TY MLD + + L EEM
Sbjct: 609 TYTAMLDAYNAAEKWEKLYALFEEM 633
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + N M++ IK D V YT+++SG + + +EM+ L L Y+ I
Sbjct: 521 AIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIIC 580
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
KQ ++ EA + M LGC P+VVT +L A A K + +EM V+L
Sbjct: 581 AYSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKL 640
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ ++ + G L + M +K
Sbjct: 641 DTIACAALMRAFNKGGQPGRVLSLAQSMREK 671
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ IL +M+QD I P+VV +L+ G VK+D + + G+ + YN I
Sbjct: 450 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 509
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ D+AI + +SM K K + VT L+ C+ +A M+EM +
Sbjct: 510 GSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLP 569
Query: 148 LNLHTYRIMLDGLVGKAEIGEA 169
++ Y ++ + +I EA
Sbjct: 570 MSKEVYSSIICAYSKQGQIIEA 591
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P ++ +I LV+ +R + + M G PDV Y ++ G+ G + +
Sbjct: 294 PTAKSYSILIVALVQNDRMEECFKFMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEAYKF 353
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
+EM G PD+ T+N ++ LC K +EA+++ MI+L C P+V T N L+ +
Sbjct: 354 LEEMGKKGYPPDIVTHNCFLKVLCHNKKSEEALKLYGRMIELSCIPSVQTYNMLISMFFK 413
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSST 187
D A EM +G + TY +M++GL + +A +LLEE++ K
Sbjct: 414 MDDPDGAFETWHEMEKRGCRPDTDTYGVMIEGLFNCNKAEDACILLEEVINKGIKLPYRK 473
Query: 188 FDNIICCMCQKGLINEALELMKKIVAKSFAPGARAW 223
FD+++ + + G + +L + P AR +
Sbjct: 474 FDSLLMQLSEIGNLQAIHKLSDHMRKFYNNPMARRF 509
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPD 79
LV+E G L + + I P+ Y I++ G + + ++ +EM+ LG PD
Sbjct: 204 LVEEAEG------LYKRMRKKINPNGDTYNILVFGWCRVRNPSRGMKVLEEMIQLGHKPD 257
Query: 80 VYTYNVYINGLCKQNKVDEAIQIVDSMIKLGC---KPNVVTCNTLLGALCEAGDLSKAKG 136
+TYN ++ CK+ + +A+++ + M G P + + L+ AL + + +
Sbjct: 258 NFTYNTALDTYCKEGMITDAVELFEFMRTKGSIISSPTAKSYSILIVALVQNDRMEECFK 317
Query: 137 VMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMC 196
M M G ++ TY+ +++G+ +I EA LEEM KK + P T + + +C
Sbjct: 318 FMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEAYKFLEEMGKKGYPPDIVTHNCFLKVLC 377
Query: 197 QKGLINEALELMKKIVAKSFAPGARAWEALL 227
EAL+L +++ S P + + L+
Sbjct: 378 HNKKSEEALKLYGRMIELSCIPSVQTYNMLI 408
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 42 KPDVVCYTIVLSGIV-------AEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQN 94
+P++ + +L + AEG Y ++ + + P+ TYN+ + G C+
Sbjct: 186 QPEINAFNFLLDALCKCCLVEEAEGLYKRMRKKIN--------PNGDTYNILVFGWCRVR 237
Query: 95 KVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHT-- 152
+++++ MI+LG KP+ T NT L C+ G ++ A + + M KG ++ T
Sbjct: 238 NPSRGMKVLEEMIQLGHKPDNFTYNTALDTYCKEGMITDAVELFEFMRTKGSIISSPTAK 297
Query: 153 -YRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
Y I++ LV + E + M+ P +T+ +II MC G I+EA + ++++
Sbjct: 298 SYSILIVALVQNDRMEECFKFMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEAYKFLEEM 357
Query: 212 VAKSFAP 218
K + P
Sbjct: 358 GKKGYPP 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P V + D+I + + +A L +M + G PD+V + L + +
Sbjct: 326 GCLPDVTTYKDIIEGMCLCGKIDEAYKFLEEMGKKGYPPDIVTHNCFLKVLCHNKKSEEA 385
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+L+ M+ L IP V TYN+ I+ K + D A + M K GC+P+ T ++
Sbjct: 386 LKLYGRMIELSCIPSVQTYNMLISMFFKMDDPDGAFETWHEMEKRGCRPDTDTYGVMIEG 445
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIG--EASLLLEEMLKKCFY 182
L A +++E+ KG++L YR L+ +EIG +A L + ++K FY
Sbjct: 446 LFNCNKAEDACILLEEVINKGIKL---PYRKFDSLLMQLSEIGNLQAIHKLSDHMRK-FY 501
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEI 166
I++ +P + N LL ALC+ + +A+G+ K M K + N TY I++ G
Sbjct: 181 IRVKTQPEINAFNFLLDALCKCCLVEEAEGLYKRMR-KKINPNGDTYNILVFGWCRVRNP 239
Query: 167 GEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS---FAPGARAW 223
+LEEM++ P + T++ + C++G+I +A+EL + + K +P A+++
Sbjct: 240 SRGMKVLEEMIQLGHKPDNFTYNTALDTYCKEGMITDAVELFEFMRTKGSIISSPTAKSY 299
Query: 224 EALLL 228
L++
Sbjct: 300 SILIV 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G+ P ++ ++ L ++ +AL + +M + P V Y +++S D
Sbjct: 357 MGKKGYPPDIVTHNCFLKVLCHNKKSEEALKLYGRMIELSCIPSVQTYNMLISMFFKMDD 416
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E + EM G PD TY V I GL NK ++A +++ +I G K ++
Sbjct: 417 PDGAFETWHEMEKRGCRPDTDTYGVMIEGLFNCNKAEDACILLEEVINKGIKLPYRKFDS 476
Query: 121 LLGALCEAGDLS 132
LL L E G+L
Sbjct: 477 LLMQLSEIGNLQ 488
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G P V+ + ++ G +A + M + G+ PD+ Y+ ++
Sbjct: 235 MRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHTFGKLNK 294
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K+ EL EM G +PDV +YNV + + E+I + M + GC PN T +
Sbjct: 295 LEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSI 354
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL + G + + EM + + + TY I++ E L +M+ +
Sbjct: 355 LLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDEN 414
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETT 240
P T++ +I + GL +A +++ + K P ++A+ ++ G Y E
Sbjct: 415 IEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEAL 474
Query: 241 FA 242
A
Sbjct: 475 VA 476
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDA---LYILNQMKQDGIKPDVVCYTIVLSGIVA 57
M++ P ++ + +I + G+D L + +M+ +GI+PDV+ Y +LS
Sbjct: 199 MKQERVSPSILTYNTVINACAR--GGLDWEGLLGLFAEMRHEGIQPDVITYNTLLSACAH 256
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
G + + +F M G++PD+ TY+ ++ K NK+++ +++ M G P+V +
Sbjct: 257 RGLGDEAEMVFRTMNEGGVVPDINTYSYLVHTFGKLNKLEKVSELLREMESGGSLPDVSS 316
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
N LL A + G + ++ GV ++M G N TY I+L+ + L EM
Sbjct: 317 YNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEMK 376
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
P + T++ +I + G E + L +V ++ P +E L+ G
Sbjct: 377 VSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACG 430
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 12 DFTDMIRFLVKEERGMDALYILNQM-KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDE 70
DF + + + +L + M +Q KP+ YTI+++ + EG K E+FDE
Sbjct: 104 DFAVVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIITLLGREGLLDKCREVFDE 163
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAG- 129
M G+ V+ Y IN + + ++++++SM + P+++T NT++ A G
Sbjct: 164 MPSQGVARSVFAYTAVINAYGRNGQFQTSVELLESMKQERVSPSILTYNTVINACARGGL 223
Query: 130 DLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFD 189
D G+ EM +G++ ++ TY +L + EA ++ M + P +T+
Sbjct: 224 DWEGLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYS 283
Query: 190 NIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSETTFAGLFNQ 247
++ + + + EL++++ + P ++ +LL + +D+ + + + G+F Q
Sbjct: 284 YLVHTFGKLNKLEKVSELLREMESGGSLPDVSSYN-VLLEAYADMGFIKESI-GVFRQ 339
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 1 MRKLGFC-PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M++ +C P +T +I L +E + ++M G+ V YT V++ G
Sbjct: 128 MQRQIWCKPNEHIYTIIITLLGREGLLDKCREVFDEMPSQGVARSVFAYTAVINAYGRNG 187
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA--IQIVDSMIKLGCKPNVVT 117
+ EL + M + P + TYN IN C + +D + + M G +P+V+T
Sbjct: 188 QFQTSVELLESMKQERVSPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVIT 246
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
NTLL A G +A+ V + M GV +++TY ++ ++ + S LL EM
Sbjct: 247 YNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHTFGKLNKLEKVSELLREME 306
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P S+++ ++ G I E++ + +++ P + + LL
Sbjct: 307 SGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSILL 356
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P ++ ++ K R D + +MK PD Y I++ + EG
Sbjct: 340 MQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQ-VFGEGG 398
Query: 61 YVK-LDELFDEMLVLGLIPDVYTYN-------------------VYIN--GLCKQNKV-- 96
Y K + LF +M+ + P++ TY +++N G+ +K
Sbjct: 399 YFKEVVTLFHDMVDENIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYT 458
Query: 97 ------------DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
+EA+ ++M ++G P V T N+L+ + G + + ++ M
Sbjct: 459 GVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNSLVCSFSRGGLYKEVEAILFRMSES 518
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G+ ++H++ +++ L + EA EM K P STF+ ++ C GL++E+
Sbjct: 519 GLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEKANCDPNESTFEAVLSIYCSAGLVDES 578
Query: 205 LELMKKIVAKSFAPG 219
E ++I A P
Sbjct: 579 EEQFQEIKASGILPS 593
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+++ + QM++ G P+ Y+I+L+ G Y + +LF EM V PD TYN+ I
Sbjct: 332 ESIGVFRQMQEAGCVPNSATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILI 391
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ E + + M+ +PN+ T L+ A + G AK ++ M KG+
Sbjct: 392 QVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIV 451
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINE 203
+ Y +++ A EA + M + P T+++++C + GL E
Sbjct: 452 PSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNSLVCSFSRGGLYKE 507
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P +T +I + +AL N M + G P V Y ++ G
Sbjct: 445 MNEKGIVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNSLVCSFSRGGL 504
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
Y +++ + M GL DV+++N I L + + +EA++ M K C PN T
Sbjct: 505 YKEVEAILFRMSESGLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEKANCDPNESTFEA 564
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
+L C AG + +++ +E+ G+ ++ Y +ML +A L++EM+
Sbjct: 565 VLSIYCSAGLVDESEEQFQEIKASGILPSVMCYCMMLTLYTKNDRSNDAYKLIDEMI 621
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V F+ ++ + + L L MK+ GI P+VV YT V+ + + G
Sbjct: 271 MRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGR 330
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCN 119
+ ++L DEM+ G+ P TYN + + D+A++ M + G C+P T
Sbjct: 331 IEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYG 390
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ +A + K + +M GV +L +Y +++ GL + EA EM++K
Sbjct: 391 VLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEK 450
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
F P+ TF+ + + Q ++ L K++ +S G+
Sbjct: 451 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESITFGS 491
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIV-AEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
DA + ++M++ GI+PDV ++IVL A + LD+L M G+ P+V TY
Sbjct: 263 DAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKL-GLMKEKGICPNVVTYTSV 321
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I LC +++EA ++D M++ G P T N D KA K+M G+
Sbjct: 322 IKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGL 381
Query: 147 -ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
E HTY +++ + IG + +M++ P ++ +I +C+ EA
Sbjct: 382 CEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREAC 441
Query: 206 ELMKKIVAKSFAPGARAWEAL 226
+ +++ K F P +E L
Sbjct: 442 QYFVEMIEKGFLPQKVTFETL 462
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA-------- 57
F V +T +I K R AL LN+MK G++P+VV Y ++L+GI
Sbjct: 196 FVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEE 255
Query: 58 --EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
E +++FDEM G+ PDV ++++ ++ + +K + + M + G PNV
Sbjct: 256 RFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNV 315
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
VT +++ LC G + +A+ ++ EM GV TY G+ + +A ++
Sbjct: 316 VTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKK 375
Query: 176 MLKKCF-YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M + P + T+ +I + +I E+ ++ P ++ L+
Sbjct: 376 MKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLI 428
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR+ G P V F+ ++ + + L L MK+ GI P+VV YT V+ + + G
Sbjct: 271 MRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGR 330
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLG-CKPNVVTCN 119
+ ++L DEM+ G+ P TYN + + D+A++ M + G C+P T
Sbjct: 331 IEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYG 390
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ +A + K + +M GV +L +Y +++ GL + EA EM++K
Sbjct: 391 VLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEK 450
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA 220
F P+ TF+ + + Q ++ L K++ +S G+
Sbjct: 451 GFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLDQESITFGS 491
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIV-AEGDYVKLDELFDEMLVLGLIPDVYTYNVY 86
DA + ++M++ GI+PDV ++IVL A + LD+L M G+ P+V TY
Sbjct: 263 DAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKL-GLMKEKGICPNVVTYTSV 321
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I LC +++EA ++D M++ G P T N D KA K+M G+
Sbjct: 322 IKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGL 381
Query: 147 -ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEAL 205
E HTY +++ + IG + +M++ P ++ +I +C+ EA
Sbjct: 382 CEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREAC 441
Query: 206 ELMKKIVAKSFAPGARAWEAL 226
+ +++ K F P +E L
Sbjct: 442 QYFVEMIEKGFLPQKVTFETL 462
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 6 FCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA-------- 57
F V +T +I K R AL LN+MK G++P+VV Y ++L+GI
Sbjct: 196 FVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEE 255
Query: 58 --EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNV 115
E +++FDEM G+ PDV ++++ ++ + +K + + M + G PNV
Sbjct: 256 RFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNV 315
Query: 116 VTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEE 175
VT +++ LC G + +A+ ++ EM GV TY G+ + +A ++
Sbjct: 316 VTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKK 375
Query: 176 MLKKCF-YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M + P + T+ +I + +I E+ ++ P ++ L+
Sbjct: 376 MKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLI 428
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD--ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + ++ RGM+ AL + N++KQ+G +PDVV YT +L+
Sbjct: 218 GLKPNIVSYNALLGAYAA--RGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 275
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K E+F + L P++ +YN I+ +++AI+I+ M + PNVV+ TLL
Sbjct: 276 KAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLL 335
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A G K V+ ++G++LN Y + + E +A L M KK
Sbjct: 336 AACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIK 395
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIV 212
S T+ +I C+ EAL M++++
Sbjct: 396 SDSVTYTVLISGCCKMSKFGEALSFMEEMM 425
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 2/235 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + ++I +AL + +M +G+ PD+V + I+L+ +
Sbjct: 72 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQ 131
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM--IKLGCKPNVVTC 118
Y K F+ + + PD T+N+ I+ L K + D+A+ I +SM K C P+VVT
Sbjct: 132 YSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTF 191
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ G + + M +G++ N+ +Y +L + EA + E+ +
Sbjct: 192 TSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQ 251
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
F P ++ +++ + +A E+ K I + P ++ AL+ GS+
Sbjct: 252 NGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSN 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTIVLSGIVAEGDYVKLD 65
P +I LVK ++ A+ I N MK+ + PDVV +T ++ G +
Sbjct: 149 PDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCE 208
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
F+ ML GL P++ +YN + + +EA+Q+ + + + G +P+VV+ +LL A
Sbjct: 209 AAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAY 268
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ KA+ + K + ++ N+ +Y ++D + +A +L EM + +P
Sbjct: 269 GRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHP 326
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 4/226 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
+C + MIR + R A + +M++ KPD Y +++ G +
Sbjct: 6 NYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWA 65
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ D+ML + P TYN IN EA+ + M G P++VT N +L A
Sbjct: 66 MNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTA 125
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK---CF 181
SKA + + + + T+ I++ LV + +A + M +K C
Sbjct: 126 FKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSEC- 184
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+P TF ++I G I ++A+ P ++ ALL
Sbjct: 185 HPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALL 230
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L+ + GIK + V Y + + G+Y K +L++ M + D TY V I+G C
Sbjct: 350 VLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCC 409
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K +K EA+ ++ M+ L + ++++ A + G + +A+ M G ++
Sbjct: 410 KMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVV 469
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEM 176
TY MLD + + L EEM
Sbjct: 470 TYTAMLDAYNAAEKWEKLYALFEEM 494
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ IL +M+QD I P+VV +L+ G VK+D + + G+ + YN I
Sbjct: 311 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 370
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ D+AI + +SM K K + VT L+ C+ +A M+EM +
Sbjct: 371 GSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLP 430
Query: 148 LNLHTYRIMLDGLVGKAEIGEA 169
++ Y ++ + +I EA
Sbjct: 431 MSKEVYSSIICAYSKQGQIIEA 452
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + N M++ IK D V YT+++SG + + +EM+ L L Y+ I
Sbjct: 382 AIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIIC 441
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
KQ ++ EA + M LGC P+VVT +L A A K + +EM V+L
Sbjct: 442 AYSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKL 501
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ ++ + G L + M +K
Sbjct: 502 DTIACAALMRAFNKGGQPGRVLSLAQSMREK 532
>Medtr7g091410.4 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 585
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD--ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + ++ RGM+ AL + N++KQ+G +PDVV YT +L+
Sbjct: 112 GLKPNIVSYNALLGAYAA--RGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 169
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K E+F + L P++ +YN I+ +++AI+I+ M + PNVV+ TLL
Sbjct: 170 KAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLL 229
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A G K V+ ++G++LN Y + + E +A L M KK
Sbjct: 230 AACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIK 289
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIV 212
S T+ +I C+ EAL M++++
Sbjct: 290 SDSVTYTVLISGCCKMSKFGEALSFMEEMM 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M +G+ PD+V + I+L+ + Y K F+ + + PD T+N+ I+ L K +
Sbjct: 1 MTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQ 60
Query: 96 VDEAIQIVDSM--IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
D+A+ I +SM K C P+VVT +++ G + + M +G++ N+ +Y
Sbjct: 61 YDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSY 120
Query: 154 RIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVA 213
+L + EA + E+ + F P ++ +++ + +A E+ K I
Sbjct: 121 NALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKR 180
Query: 214 KSFAPGARAWEALLLHSGSD 233
+ P ++ AL+ GS+
Sbjct: 181 NNLKPNIVSYNALIDAYGSN 200
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTIVLSGIVAEGDYVKLD 65
P +I LVK ++ A+ I N MK+ + PDVV +T ++ G +
Sbjct: 43 PDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCE 102
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
F+ ML GL P++ +YN + + +EA+Q+ + + + G +P+VV+ +LL A
Sbjct: 103 AAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAY 162
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ KA+ + K + ++ N+ +Y ++D + +A +L EM + +P
Sbjct: 163 GRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHP 220
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L+ + GIK + V Y + + G+Y K +L++ M + D TY V I+G C
Sbjct: 244 VLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCC 303
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K +K EA+ ++ M+ L + ++++ A + G + +A+ M G ++
Sbjct: 304 KMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVV 363
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEM 176
TY MLD + + L EEM
Sbjct: 364 TYTAMLDAYNAAEKWEKLYALFEEM 388
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ IL +M+QD I P+VV +L+ G VK+D + + G+ + YN I
Sbjct: 205 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 264
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ D+AI + +SM K K + VT L+ C+ +A M+EM +
Sbjct: 265 GSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLP 324
Query: 148 LNLHTYRIMLDGLVGKAEIGEA 169
++ Y ++ + +I EA
Sbjct: 325 MSKEVYSSIICAYSKQGQIIEA 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + N M++ IK D V YT+++SG + + +EM+ L L Y+ I
Sbjct: 276 AIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIIC 335
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
KQ ++ EA + M LGC P+VVT +L A A K + +EM V+L
Sbjct: 336 AYSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKL 395
Query: 149 N 149
+
Sbjct: 396 D 396
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 4/210 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMD--ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
G P ++ + ++ RGM+ AL + N++KQ+G +PDVV YT +L+
Sbjct: 153 GLKPNIVSYNALLGAYAA--RGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 210
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K E+F + L P++ +YN I+ +++AI+I+ M + PNVV+ TLL
Sbjct: 211 KAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLL 270
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY 182
A G K V+ ++G++LN Y + + E +A L M KK
Sbjct: 271 AACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIK 330
Query: 183 PRSSTFDNIICCMCQKGLINEALELMKKIV 212
S T+ +I C+ EAL M++++
Sbjct: 331 SDSVTYTVLISGCCKMSKFGEALSFMEEMM 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 2/235 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + P + ++I +AL + +M +G+ PD+V + I+L+ +
Sbjct: 7 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQ 66
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM--IKLGCKPNVVTC 118
Y K F+ + + PD T+N+ I+ L K + D+A+ I +SM K C P+VVT
Sbjct: 67 YSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTF 126
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
+++ G + + M +G++ N+ +Y +L + EA + E+ +
Sbjct: 127 TSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQ 186
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSD 233
F P ++ +++ + +A E+ K I + P ++ AL+ GS+
Sbjct: 187 NGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSN 241
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTIVLSGIVAEGDYVKLD 65
P +I LVK ++ A+ I N MK+ + PDVV +T ++ G +
Sbjct: 84 PDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCE 143
Query: 66 ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGAL 125
F+ ML GL P++ +YN + + +EA+Q+ + + + G +P+VV+ +LL A
Sbjct: 144 AAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAY 203
Query: 126 CEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
+ KA+ + K + ++ N+ +Y ++D + +A +L EM + +P
Sbjct: 204 GRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHP 261
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L+ + GIK + V Y + + G+Y K +L++ M + D TY V I+G C
Sbjct: 285 VLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCC 344
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K +K EA+ ++ M+ L + ++++ A + G + +A+ M G ++
Sbjct: 345 KMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQGQIIEAESTFNLMKSLGCSPDVV 404
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEM 176
TY MLD + + L EEM
Sbjct: 405 TYTAMLDAYNAAEKWEKLYALFEEM 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
DA+ IL +M+QD I P+VV +L+ G VK+D + + G+ + YN I
Sbjct: 246 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 305
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ D+AI + +SM K K + VT L+ C+ +A M+EM +
Sbjct: 306 GSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLP 365
Query: 148 LNLHTYRIMLDGLVGKAEIGEA 169
++ Y ++ + +I EA
Sbjct: 366 MSKEVYSSIICAYSKQGQIIEA 387
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + N M++ IK D V YT+++SG + + +EM+ L L Y+ I
Sbjct: 317 AIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIIC 376
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
KQ ++ EA + M LGC P+VVT +L A A K + +EM V+L
Sbjct: 377 AYSKQGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKL 436
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
+ ++ + G L + M +K
Sbjct: 437 DTIACAALMRAFNKGGQPGRVLSLAQSMREK 467
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
I++ M + I P Y +++ + G++ + + +M G+ PD+ T+N+ +
Sbjct: 3 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFK 62
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN-- 149
+ +A+ + + +P+ T N ++ L + KA + M K E +
Sbjct: 63 SGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPD 122
Query: 150 --LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
T I L + G E EA+ + ML + P +++ ++ +G+ NEAL++
Sbjct: 123 VVTFTSMIHLYSVCGHIENCEAAFNM--MLAEGLKPNIVSYNALLGAYAARGMENEALQV 180
Query: 208 MKKIVAKSFAPGARAWEALL 227
+I F P ++ +LL
Sbjct: 181 FNEIKQNGFRPDVVSYTSLL 200
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K G P ++ + +I +E +A+ + + M+ + +PD+ Y ++S G +
Sbjct: 329 KFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFAL 388
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLL 122
K + LF+++ G PD TYN + K+ ++ I + M+K+G + +T NT++
Sbjct: 389 KAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTII 448
Query: 123 GALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKA-EIGEASLLLEEMLKKCF 181
+ G +A + ++M G + TY +++D L+GKA +I EAS ++ EML
Sbjct: 449 HMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLID-LLGKASKIEEASKVMSEMLDAGV 507
Query: 182 YPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T+ +IC + G EA E ++ A+ +L
Sbjct: 508 KPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVML 553
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
GF P + + ++ KE I +M + G D + Y ++ G + +
Sbjct: 401 GFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEA 460
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ +M G PD TY V I+ L K +K++EA +++ M+ G KP + T + L+ A
Sbjct: 461 LRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICA 520
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
+ G +A+ M G++ + Y +MLD + EI +A+ L +EM++ F P
Sbjct: 521 YAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPD 580
Query: 185 SSTFDNIICCMCQKGL 200
+ ++ ++ + ++ +
Sbjct: 581 TGLYEVMLPALVRENM 596
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G+ P + + MI L + +R D +L++M + G KPD+ + VL + +
Sbjct: 920 MKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEE 979
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++ + GL PD TYN I C+ ++ +E + ++ M LG +P T +
Sbjct: 980 FQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRS 1039
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ A + +A+ + +E+ G +L+ Y +M+ + +A LLE M +
Sbjct: 1040 MIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG 1099
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKI 211
P ++T ++ + G EA ++K +
Sbjct: 1100 IEPNTATMHLLMVSYGKSGQPEEADRILKNL 1130
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYI--LNQMKQDGIKPDVVCYTIVLSGIVAE 58
MR+ G P ++ F +I VK + L I L+++ + G++PD++ Y ++S E
Sbjct: 290 MRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRE 349
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
+ + +F M PD++TYN I+ + +A + + + G P+ VT
Sbjct: 350 SNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTY 409
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
N+LL A + G+ K + + +EM G + TY ++ EA L +M
Sbjct: 410 NSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKS 469
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P + T+ +I + + I EA ++M +++ P + AL+
Sbjct: 470 SGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALI 518
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAE-GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
K + + D V + G+ A G++ K++E+F+ M G PD+ ++N IN K
Sbjct: 255 KAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCA 314
Query: 96 VDE--AIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTY 153
AI+++D + K G +P+++T NTL+ A +L +A GV M + +L TY
Sbjct: 315 TVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTY 374
Query: 154 RIMLDGLVGKAEIG-EASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIV 212
M+ + G+ +A L E++ F P + T+++++ ++G + ++ +++V
Sbjct: 375 NAMI-SVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMV 433
Query: 213 AKSF 216
F
Sbjct: 434 KMGF 437
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + +I ++ R + L ++++MK G++P Y +++ + Y +
Sbjct: 994 GLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQA 1053
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
+ELF+E+ G D Y++ + +A +++ M + G +PN T + L+ +
Sbjct: 1054 EELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVS 1113
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
++G +A ++K + G L+ Y ++D + K + L EM + P
Sbjct: 1114 YGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPD 1173
Query: 185 SSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
+ I G +N+A L+ + A F
Sbjct: 1174 HRIWTCFIRAASLSGEVNDANNLLNALQAVGF 1205
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
G P + ++ +I K R ++A N+M++ GIK D + Y+++L + + K
Sbjct: 506 GVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKA 565
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L+ EM+ G PD Y V + L ++N D ++V +LG + + +
Sbjct: 566 AALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGS----MNPHDISSV 621
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPR 184
L + G ++K G EL+ + ++ A EA L+E +
Sbjct: 622 LVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREHAPDDI 681
Query: 185 SSTFDNIICCMCQKGLINEALE 206
+ +I +C+ G ++ ALE
Sbjct: 682 QMITEALIIILCKAGKLDAALE 703
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQD-GIKPDVVCYTIVLSGIVAEG 59
M + G P V +++ L+ + R + LY++ Q QD +K ++L G
Sbjct: 850 MMREGPSPTVESVNGLLQALIVDGR-LSELYVVIQELQDMDLKISKSSILLMLEAFAQAG 908
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++ ++++ M G P ++ Y + I LC+ +V + ++ M + G KP++ N
Sbjct: 909 NLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFN 968
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++L + + + + G+ + TY ++ E L+ +M
Sbjct: 969 SVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSL 1028
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
P+ T+ ++I ++ L ++A EL +++ + +
Sbjct: 1029 GLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGY 1065
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 77/173 (44%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG P + MI K++ A + +++ +G K D Y +++ GD
Sbjct: 1025 MKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGD 1084
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ K + L + M G+ P+ T ++ + K + +EA +I+ ++ +G + + ++
Sbjct: 1085 HQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSS 1144
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLL 173
++ A + GD + EM +E + + + E+ +A+ LL
Sbjct: 1145 VIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLL 1197
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%)
Query: 15 DMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
D+I K + A I+ ++Q K D + ++ G Y + +F+ M+
Sbjct: 794 DIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRE 853
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
G P V + N + L ++ E ++ + + K + + +L A +AG+L +
Sbjct: 854 GPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEV 913
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+ V M G +H YR+M+ L + + ++L EM + F P F++++
Sbjct: 914 QKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVL 971
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G PGV+ + +IR L K +R DA + N M DGI PD YT+++ G+
Sbjct: 458 MPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEGLCECDQ 517
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + ++ I D + Y + GLC K +EA + ++ G PN+ + N
Sbjct: 518 IEEAKSFWQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHFLYELVDSGISPNIYSYNI 577
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
L+ C G + +++EM GV + T+RI+
Sbjct: 578 LINCACNLGLKREVYQIVREMNKNGVAPDCVTWRIL 613
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 10/223 (4%)
Query: 10 VMDFTDMIRFLVKEERGMDALYILNQMKQDGI-KPDVVCYTIVLSGIVAEGDYVKLDELF 68
V+ +I K R +AL +LN M PDVV +T ++SG++ D K+DE
Sbjct: 395 VITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLL---DAEKVDEAL 451
Query: 69 D----EMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
D M GL P V TYNV I L K + ++A ++ ++M G P+ T ++
Sbjct: 452 DLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIVEG 511
Query: 125 LCEAGDLSKAKGVMKE-MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
LCE + +AK + + G+ N Y +L GL + EA L E++ P
Sbjct: 512 LCECDQIEEAKSFWQSVIWPSGIHDNF-VYAAILKGLCSSGKFNEACHFLYELVDSGISP 570
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEAL 226
+++ +I C C GL E ++++++ AP W L
Sbjct: 571 NIYSYNILINCACNLGLKREVYQIVREMNKNGVAPDCVTWRIL 613
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 2/229 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MRK F P + + +I L K+ M +L + + G Y +++ + D
Sbjct: 281 MRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLD 340
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E+ ML + YN+Y+ LC N E + ++ M++ C+ +V+T NT
Sbjct: 341 VDKAREVLKLMLYKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNT 400
Query: 121 LLGALCEAGDLSKAKGVMKEMGL-KGVELNLHTYRIMLDGLVGKAEIGEA-SLLLEEMLK 178
++ C+ G +A V+ +M L K ++ T+ ++ GL+ ++ EA L M +
Sbjct: 401 VINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPE 460
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
P T++ +I C+ + N+A E+ + P + + ++
Sbjct: 461 NGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDSTTYTVIV 509
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
Query: 17 IRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL 76
+R L + L +L M + + DV+ V++G G + + ++ ++ML+
Sbjct: 367 LRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKF 426
Query: 77 -IPDVYTYNVYINGLCKQNKVDEAIQIVDS-MIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
PDV T+ I+GL KVDEA+ + + M + G KP VVT N L+ L + + A
Sbjct: 427 CAPDVVTFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDA 486
Query: 135 KGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICC 194
V M G+ + TY ++++GL +I EA + ++ + + I+
Sbjct: 487 FEVFNNMAGDGITPDSTTYTVIVEGLCECDQIEEAKSFWQSVIWPSGIHDNFVYAAILKG 546
Query: 195 MCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+C G NEA + ++V +P ++ L+
Sbjct: 547 LCSSGKFNEACHFLYELVDSGISPNIYSYNILI 579
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 11/233 (4%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
K GF P ++++ ++ R DA + MK G P+VV YT +++G + G
Sbjct: 103 KAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTTLINGYCSVGGIR 162
Query: 63 KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCK--------PN 114
++FDEML GL P+ TY+V I G + + ++ M KL + N
Sbjct: 163 DAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGREL---MCKLWERMKMEDELSVN 219
Query: 115 VVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLE 174
V L+ +LC+ G ++ + + M Y M+D A+ ++
Sbjct: 220 VAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGRYHGAARIVY 279
Query: 175 EMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
M K+ F P ++++II + + G +L+++ F+ ++ L+
Sbjct: 280 LMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLV 332
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
Query: 3 KLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYV 62
L F P + ++ L R +A + G PD ++L+ ++
Sbjct: 31 SLSFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPF 90
Query: 63 KLDELFDEMLVL--GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L ++ + G +P + YN ++ C ++ +A ++ M G PNVV+ T
Sbjct: 91 QTWSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHRPFDAHRLFFDMKNRGHCPNVVSYTT 150
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ C G + A V EM G+E N TY +++ G + + L+ ++ ++
Sbjct: 151 LINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERM 210
Query: 181 -----FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ F N+I +C++G NE E+ + + S P
Sbjct: 211 KMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLP 253
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 43/252 (17%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G CP V+ +T +I DA+ + ++M + G++P+ + Y++++ G + D
Sbjct: 136 MKNRGHCPNVVSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRD 195
Query: 61 YVKLDEL---------------------------------FDEMLVLG-------LIPDV 80
+ EL F+E+ + +P+
Sbjct: 196 FESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQ 255
Query: 81 YTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKE 140
Y I+ CK + A +IV M K P+ V+ N ++ L + GD + +++E
Sbjct: 256 VVYGQMIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEE 315
Query: 141 MGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
G L HTY+++++ L ++ +A +L+ ML K ++ ++ + +C
Sbjct: 316 GAEFGFSLCEHTYKVLVEALCRVLDVDKAREVLKLMLYKEGVDKTRIYNIYLRALCH--- 372
Query: 201 INEALELMKKIV 212
+N EL+ +V
Sbjct: 373 VNNPTELLNVLV 384
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 105/199 (52%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
MI L K + +A+ + ++ + PD+V Y+ ++ G+ G + +L D+M G
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRG 60
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
D+ Y ++ L K ++VD+AI ++ + G +P++ T L+ LC+ G L A+
Sbjct: 61 QQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQ 120
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
V +++ +KG N + +M++GL + EA +L EM P T+ +I +
Sbjct: 121 EVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRAL 180
Query: 196 CQKGLINEALELMKKIVAK 214
+ + ++A++L+++++++
Sbjct: 181 FKNDMNDKAVKLLREMLSR 199
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 90/161 (55%)
Query: 67 LFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALC 126
LF E+ + + PD+ Y+ I+GLCK K+ + ++D M G + +++ +LL AL
Sbjct: 17 LFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDALF 76
Query: 127 EAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSS 186
+ + KA ++K++ +G+E ++ TY +++DGL + +A + +++ K ++ +
Sbjct: 77 KNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNAC 136
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ +I +C++GL +EAL ++ ++ P ++ L+
Sbjct: 137 MHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLI 177
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G ++ +T ++ L K + A+ +L ++K GI+PD+ YT+++ G+ G
Sbjct: 56 MHDRGQQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGR 115
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
E++ +++V G + +NV INGLCK+ DEA+ ++ M GC P+VVT T
Sbjct: 116 LKDAQEVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKT 175
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ AL + KA +++EM +G+
Sbjct: 176 LIRALFKNDMNDKAVKLLREMLSRGL 201
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKL 64
P ++ ++ +I L K + D +++ M G + D++ YT +L + K
Sbjct: 25 NMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQQADIIIYTSLLDALFKNHQVDKA 84
Query: 65 DELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA 124
L ++ G+ PD++TY + ++GLCK ++ +A ++ ++ G N N ++
Sbjct: 85 IALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQEVYRDLMVKGYHFNACMHNVMING 144
Query: 125 LCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
LC+ G +A V+ EM G ++ TY+ ++ L +A LL EML +
Sbjct: 145 LCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRALFKNDMNDKAVKLLREMLSR 199
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 72/134 (53%)
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
INGLCK VDEA+ + + P++V ++L+ LC++G +S ++ +M +G
Sbjct: 2 INGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRGQ 61
Query: 147 ELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
+ ++ Y +LD L ++ +A LL+++ + P T+ ++ +C+ G + +A E
Sbjct: 62 QADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQE 121
Query: 207 LMKKIVAKSFAPGA 220
+ + ++ K + A
Sbjct: 122 VYRDLMVKGYHFNA 135
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+GF + +I L K AL +L ++ ++PDVV Y ++ + +
Sbjct: 74 IGFMLDQFSYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIIDSMCKDKHVNH 133
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+L+ +M+ + PD+ TYN I+ C +G KPN VT N+L+
Sbjct: 134 AFDLYSKMVSKRISPDILTYNALISDFCI----------------VGFKPNFVTYNSLMD 177
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYP 183
C +++KAK + M +GV + +Y I+++G ++ EA L EEM + P
Sbjct: 178 GYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIP 237
Query: 184 RSSTFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
T++++I +C+ G I+ AL+L+ ++ + P
Sbjct: 238 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPP 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%)
Query: 71 MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGD 130
M LG+ PD+ N+ N C+ + + ++ ++K+G +P+ +T NTL+ LC GD
Sbjct: 1 MEFLGIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGD 60
Query: 131 LSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDN 190
+ +A ++ G L+ +Y +++ L E A LL + K P +
Sbjct: 61 IHQALHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIA 120
Query: 191 IICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
II MC+ +N A +L K+V+K +P + AL+
Sbjct: 121 IIDSMCKDKHVNHAFDLYSKMVSKRISPDILTYNALI 157
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 4 LGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVK 63
+GF P + + ++ + A I N M Q+G+ P + Y I+++G +
Sbjct: 163 VGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKKVDE 222
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
LF+EM LIPDV TYN I+GLCK K+ A+++VD M G P+++T
Sbjct: 223 AINLFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%)
Query: 40 GIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEA 99
GIKPD+V I+ + G + ++L +G PD T N I GLC + + +A
Sbjct: 5 GIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQA 64
Query: 100 IQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDG 159
+ D ++ +G + + TL+ LC+AG+ A +++ + K V+ ++ Y ++D
Sbjct: 65 LHFHDKLVAIGFMLDQFSYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIIDS 124
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGL 200
+ + A L +M+ K P T++ +I C G
Sbjct: 125 MCKDKHVNHAFDLYSKMVSKRISPDILTYNALISDFCIVGF 165
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 3/203 (1%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCY-TIVLSGIVAEGDYVK 63
G V F+ MI + DA+ + M+ G+ P+++ Y +++ +G E D+
Sbjct: 208 GHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDV 267
Query: 64 LDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLG 123
+ + FDEML G++PD TYN ++ + + A +++ M + G + T NT L
Sbjct: 268 VVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLD 327
Query: 124 ALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFY 182
LC+ G + A+ V++EM + V + TY M+DG KA + E +L L EEM +
Sbjct: 328 TLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDG-CAKANLLEDALNLYEEMKLRSIS 386
Query: 183 PRSSTFDNIICCMCQKGLINEAL 205
+++ ++ + G +EA+
Sbjct: 387 VDRVSYNTMVGIYAKLGRFDEAI 409
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 36/245 (14%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
MR G P ++ + +I K E D + ++M +GI PD + Y +LS ++G
Sbjct: 239 MRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKG 298
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVY--------------------------------- 86
+ +L EM G++ D +TYN Y
Sbjct: 299 MWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYS 358
Query: 87 --INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLK 144
I+G K N +++A+ + + M + V+ NT++G + G +A G KEM
Sbjct: 359 TMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESC 418
Query: 145 GVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEA 204
G++ ++ TY +L G E L EEM YP + T+ +I + G+ EA
Sbjct: 419 GMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEA 478
Query: 205 LELMK 209
+++ K
Sbjct: 479 MDVYK 483
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
AL + + +G V ++ ++S G + +LF M G+ P++ +YN I+
Sbjct: 197 ALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLID 256
Query: 89 GLCK-QNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
K + D ++ D M+ G P+ +T N+LL G A+ ++ EM KG+
Sbjct: 257 AGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIV 316
Query: 148 LNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ TY LD L +I A +LEEM + +P T+ +I + L+ +AL L
Sbjct: 317 RDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNL 376
Query: 208 MKKIVAKSFA 217
+++ +S +
Sbjct: 377 YEEMKLRSIS 386
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ ++ MI K DAL + +MK I D V Y ++ G Y KL
Sbjct: 352 PTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMV------GIYAKLGR- 404
Query: 68 FDE-------MLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
FDE M G+ DV TYN ++G + DE ++ + M PN +T +T
Sbjct: 405 FDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYST 464
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
++ + G +A V K+ +E+++ Y ++D L + + +LL M++K
Sbjct: 465 MIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKG 524
Query: 181 FYPRSSTFDNIICCMCQ 197
P TF++II Q
Sbjct: 525 IKPNVVTFNSIIDASRQ 541
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 83.2 bits (204), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 2/228 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M K G P V+ + +I + +AL + NQM++ +PD V Y ++ I A+
Sbjct: 433 MVKDGCQPNVVTYNRLIHSYGRANYLKEALNVFNQMQEKRCEPDRVTYCTLID-IHAKAG 491
Query: 61 YVKLD-ELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
Y+ + +++ M +GL PD +TY+V IN L K + A ++ M+ GC PN+VT N
Sbjct: 492 YLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYN 551
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
++ +A + A + ++M G + TY I+++ L + EA + EM ++
Sbjct: 552 IMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQR 611
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ P + ++ + G + +A E +++ P +LL
Sbjct: 612 NWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVPTCNSLL 659
Score = 77.8 bits (190), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 29 ALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYIN 88
A+ + +M+Q G+ PD Y+++++ + G+ D LF EM+ G +P++ TYN+ I
Sbjct: 496 AMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMIA 555
Query: 89 GLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
K + A+++ M G +P+ VT + ++ L G L +A+ V EM +
Sbjct: 556 LQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQRNWVP 615
Query: 149 NLHTYRIMLDGLVGKA-EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALEL 207
+ Y +++D L GKA + +A ML P T ++++ + + +A L
Sbjct: 616 DEPVYGLLVD-LWGKAGNVEKAWEWYGAMLSAGLLPNVPTCNSLLSAFLRVHRLPDAYNL 674
Query: 208 MKKIVAKSFAPGARAWEALL 227
++ +VA +P + + LL
Sbjct: 675 LQSMVALGLSPSLQTYTLLL 694
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 74/157 (47%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M G P ++ + MI K AL + M+ G +PD V Y+IV+ + G
Sbjct: 538 MVDQGCVPNIVTYNIMIALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLGHCGY 597
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ + +F EM +PD Y + ++ K V++A + +M+ G PNV TCN+
Sbjct: 598 LEEAEAVFVEMKQRNWVPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVPTCNS 657
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
LL A L A +++ M G+ +L TY ++L
Sbjct: 658 LLSAFLRVHRLPDAYNLLQSMVALGLSPSLQTYTLLL 694
Score = 68.9 bits (167), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLD-ELFDEMLVLGLIPDVYTYNVYINGL 90
+L QM +DG +P+VV Y ++ +Y+K +F++M PD TY I+
Sbjct: 429 LLEQMVKDGCQPNVVTYNRLIHS-YGRANYLKEALNVFNQMQEKRCEPDRVTYCTLIDIH 487
Query: 91 CKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNL 150
K +D A+ + + M ++G P+ T + ++ L ++G+L+ A + EM +G N+
Sbjct: 488 AKAGYLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLFGEMVDQGCVPNI 547
Query: 151 HTYRIMLDGLVGKAEIGEASL-LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMK 209
TY IM+ L KA EA+L L +M F P T+ ++ + G + EA +
Sbjct: 548 VTYNIMI-ALQAKARNYEAALKLYRDMQNAGFRPDKVTYSIVMEVLGHCGYLEEAEAVFV 606
Query: 210 KIVAKSFAP 218
++ +++ P
Sbjct: 607 EMKQRNWVP 615
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 37 KQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKV 96
+Q + D YT ++ + ++ ++ L ++M+ G P+V TYN I+ + N +
Sbjct: 399 RQPSFRHDGHTYTTMVGILGRAREFGAINNLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 458
Query: 97 DEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIM 156
EA+ + + M + C+P+ VT TL+ +AG L A + + M G+ + TY +M
Sbjct: 459 KEALNVFNQMQEKRCEPDRVTYCTLIDIHAKAGYLDVAMSMYERMQQVGLSPDTFTYSVM 518
Query: 157 LDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
++ L + A L EM+ + P T++ +I + AL+L + + F
Sbjct: 519 INCLGKSGNLAAADRLFGEMVDQGCVPNIVTYNIMIALQAKARNYEAALKLYRDMQNAGF 578
Query: 217 APGARAWE---ALLLHSGSDLTYSETTFAGLFNQN 248
P + +L H G L +E F + +N
Sbjct: 579 RPDKVTYSIVMEVLGHCGY-LEEAEAVFVEMKQRN 612
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 5/240 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ GF P + ++ ++ L +A + +MKQ PD Y +++ G+
Sbjct: 573 MQNAGFRPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQRNWVPDEPVYGLLVDLWGKAGN 632
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K E + ML GL+P+V T N ++ + +++ +A ++ SM+ LG P++ T
Sbjct: 633 VEKAWEWYGAMLSAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQSMVALGLSPSLQTYTL 692
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
LL +A + M + G ++ + G G+ AS L+ M +
Sbjct: 693 LLSCCTDAQSQYDMGFCCELMKVSGHPAHVFLQSMPAAGPDGQNVRDHASKFLDLMHSED 752
Query: 181 FYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGA-----RAWEALLLHSGSDLT 235
+ D ++ + + GL EA + + ++ P A R + + LH SD T
Sbjct: 753 REGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYPDAVKEKSRCYWLINLHVMSDGT 812
>Medtr7g060720.1 | PPR containing plant-like protein, putative | HC
| chr7:21955726-21958466 | 20130731
Length = 535
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 37/256 (14%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P V+ +++ L K A+ +L++M G+ P+VV YT VL G V GD ++
Sbjct: 189 PNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKV 248
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGA--- 124
F E+L G PDV +Y V ++G C+ K+ +AI+++D M G +PN VT ++ A
Sbjct: 249 FREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCK 308
Query: 125 --------------------------------LCEAGDLSKAKGVMKEMGLKGVELN-LH 151
LCE G++ KA + + + K LN
Sbjct: 309 EKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAV 368
Query: 152 TYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKI 211
++ L K ++ EA + +E K T++ +I +C+ G + EA L +
Sbjct: 369 VVSTLIHWLCKKGKVLEARNVFDEFGKGSVA-SLLTYNTLIAGLCEGGELCEAARLWDDM 427
Query: 212 VAKSFAPGARAWEALL 227
V K AP A + L+
Sbjct: 428 VEKGVAPNAFTYNMLI 443
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYIL-NQMKQDGIKPDVVCYTIVLSGIVAEG 59
+ G P V ++ LV+ +R A + N ++ + P+VV I+L +
Sbjct: 146 IESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGN 205
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
+ ++ DEM +GL+P+V +Y + G + +D A+++ ++ G P+V +
Sbjct: 206 EVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYT 265
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ C G L A VM M GVE N TY +M+ + + GEA L+E+M+ K
Sbjct: 266 VLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAK 325
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKS 215
S ++ +C++G + +A E+ + + K+
Sbjct: 326 DLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKN 361
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 5 GFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAE---GDY 61
G+ P V +T ++ + + +DA+ +++ M+ +G++P+ V Y +++ E G+
Sbjct: 256 GWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEA 315
Query: 62 VKL-DELFDEMLVLG----------------------LIPDVYTYNVYING--------- 89
V L +++ + LV+G + V N +NG
Sbjct: 316 VNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIH 375
Query: 90 -LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVEL 148
LCK+ KV EA + D K G +++T NTL+ LCE G+L +A + +M KGV
Sbjct: 376 WLCKKGKVLEARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAP 434
Query: 149 NLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
N TY +++ G E +LEEML+ P ST+ +I
Sbjct: 435 NAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILI 478
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 9 GVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELF 68
G + + +I +L K+ + ++A + ++ + + ++ Y +++G+ G+ + L+
Sbjct: 366 GAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVA-SLLTYNTLIAGLCEGGELCEAARLW 424
Query: 69 DEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEA 128
D+M+ G+ P+ +TYN+ I G CK E I++++ M++ C PN T L+ +
Sbjct: 425 DDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLL 484
Query: 129 GDLSKAKGVMKEMGLK-GVELNLHTYRIMLDGLVGKAEIGEASL 171
G + + + + + GV+ +L + I + +VG GEA L
Sbjct: 485 GGMKQEINKVVSLAMSTGVDADL--WNIFVKPVVGNDNGGEAEL 526
>Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:37501923-37503405 | 20130731
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
F+ ++ L KE + +AL + N M I PD++ ++ +
Sbjct: 50 FSTILNCLCKEGKPKEALKLYNVMHSKNISPDIITLILLYACFYK--------------- 94
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
++ D+YTY I LCK+ K+ A I+ M++LG KP++V+ N+L+ C G++
Sbjct: 95 ---VVLDMYTYTTLIQSLCKEGKLQVAKSIIPRMLRLGIKPDIVSYNSLIYGYCLIGEMD 151
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEM---------------L 177
+ + M G+EL+L +Y + +G + + + SLLL +M
Sbjct: 152 AVRKLFDNMHSIGIELDLSSYITLFNGYFNRRMVDDVSLLLLKMRSTGLMPDLHVYNYIF 211
Query: 178 KKCFY----PRSSTFDNIICCMCQKGLINEALELMKKI 211
+ FY P + T + ++ +C+ + E EL+ K+
Sbjct: 212 NELFYTGLRPDTYTLNLVLALLCKTKKVAEVTELLSKM 249
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 50/199 (25%)
Query: 13 FTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
+T +I+ L KE + A I+ +M + GIKPD+V Y ++ G G+ + +LFD M
Sbjct: 102 YTTLIQSLCKEGKLQVAKSIIPRMLRLGIKPDIVSYNSLIYGYCLIGEMDAVRKLFDNMH 161
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAI-------------------QIVDSMIKLGCKP 113
+G+ D+ +Y NG + VD+ I + + G +P
Sbjct: 162 SIGIELDLSSYITLFNGYFNRRMVDDVSLLLLKMRSTGLMPDLHVYNYIFNELFYTGLRP 221
Query: 114 NVVTCNTLLGALCEAGDLSKAKGVMKEM-------------------------------G 142
+ T N +L LC+ +++ ++ +M
Sbjct: 222 DTYTLNLVLALLCKTKKVAEVTELLSKMENFDIQRDTSFIQRLCIRNMCREALMLFMKMK 281
Query: 143 LKGVELNLHTYRIMLDGLV 161
+KG N TY++++ LV
Sbjct: 282 VKGFNPNDVTYKLLIQALV 300
>Medtr3g083680.1 | PPR containing plant-like protein | HC |
chr3:37762257-37764734 | 20130731
Length = 684
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 28 DALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYI 87
+A +L +M+ +G+ P Y+ +L+ V +V+ LF EM + D+ T N+ I
Sbjct: 284 EARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMI 343
Query: 88 NGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVE 147
+ + + EA M K+G +PNVV+ NT+L EAG +A + M +KGV
Sbjct: 344 DVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVP 403
Query: 148 LNLHTYRIMLDGLVGKA-EIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALE 206
N+ TY M+ + GK+ E +A+ L++EM + P + T+ II + G ++ A
Sbjct: 404 QNVVTYNTMI-SIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAM 462
Query: 207 LMKKI 211
L K+
Sbjct: 463 LFHKL 467
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNK 95
M++ GI+P+VV Y VL G + + LF M + G+ +V TYN I+ K +
Sbjct: 362 MRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLE 421
Query: 96 VDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRI 155
D+A ++ M G +PN +T +T++ +AG L +A + ++ GV+++ Y+
Sbjct: 422 HDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQT 481
Query: 156 MLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKK 210
M+ + A LL E+ + P + + + I + + G ++EA+ + ++
Sbjct: 482 MIVAYQKAGLVAHAKRLLNELKQ----PDNVSRETAITILARAGKVDEAMWVFRQ 532
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVL 74
MI L +E +L IL+ M + P + Y +V+ ++ + LFDEML
Sbjct: 130 MISILSREPDWQRSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQWQLAHGLFDEMLQK 189
Query: 75 GLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKA 134
GL PD YTY+ I KQ D + + M + ++V + L+ + D SKA
Sbjct: 190 GLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCDYSKA 249
Query: 135 KGVMKEM-GLKGVELNLHTYRIMLDGLVGKAEI-GEASLLLEEMLKKCFYPRSSTFDNII 192
+ + G + +L +M+ + GKA++ EA LLL+EM P ++++ ++
Sbjct: 250 ISIFNALKGSGNIVPDLIACNMMI-SVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLL 308
Query: 193 CCMCQKGLINEALELMKKI 211
EA+ L ++
Sbjct: 309 AIYVDNQKFVEAVSLFSEM 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 1/241 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M + G P ++ +I K+ + + L QM++D + D+V Y+ ++ D
Sbjct: 186 MLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCD 245
Query: 61 YVKLDELFDEMLVLG-LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCN 119
Y K +F+ + G ++PD+ N+ I+ K EA ++ M G P+ + +
Sbjct: 246 YSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASYS 305
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
TLL + +A + EM ++L T IM+D I EA M K
Sbjct: 306 TLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKM 365
Query: 180 CFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSGSDLTYSET 239
P +++ ++ + GL EA+ L + K + ++ G L + +
Sbjct: 366 GIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKA 425
Query: 240 T 240
T
Sbjct: 426 T 426
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGM--DALYILNQMKQDGIKPDVVCYTIVLSGIVAE 58
MRK+G P V+ + ++R V E G+ +A+++ + M+ G+ +VV Y ++S
Sbjct: 362 MRKMGIEPNVVSYNTVLR--VYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKS 419
Query: 59 GDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTC 118
++ K L EM G+ P+ TY+ I+ K K+D A + + G K + +
Sbjct: 420 LEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILY 479
Query: 119 NTLLGALCEAGDLSKAKGVMKEM 141
T++ A +AG ++ AK ++ E+
Sbjct: 480 QTMIVAYQKAGLVAHAKRLLNEL 502
>Medtr7g099380.1 | PPR containing plant-like protein | HC |
chr7:39851414-39850788 | 20130731
Length = 208
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ G P + ++ K + +A+ + M + + PDV Y ++ G+ EG
Sbjct: 1 MKNNGLVPNRNTYNILVHGYCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRGLCDEGK 60
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ L DEM L L+PD TYN I+G + A ++V+ M G K N VT N
Sbjct: 61 IDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKENAVTHNI 120
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELN--LHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
++ C+ G++ +A M +M G L L +Y +M++G ++ +A +++EM +
Sbjct: 121 MVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKMMDEMGR 180
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEA 204
K + T + I+ +C + +++A
Sbjct: 181 KGLKTDTFTLNTILYTLCLEKKLDDA 206
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 36 MKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGL------IPDVYTYNVYING 89
MK +G+ P+ Y I++ G Y KL L + + V L +PDV+TYN + G
Sbjct: 1 MKNNGLVPNRNTYNILVHG------YCKLKWLKEAVEVTELMTGNDMLPDVWTYNTMVRG 54
Query: 90 LCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELN 149
LC + K+DEA+++ D M L P+ VT NTL+ E + A +++EM +GV+ N
Sbjct: 55 LCDEGKIDEAVRLRDEMESLRLVPDGVTYNTLIDGCFEHQGSAAAFKLVEEMKSRGVKEN 114
Query: 150 LHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFY--PRSSTFDNIICCMCQKGLINEALEL 207
T+ IM+ + + EAS + +M + F +++ +I C+ G + +A ++
Sbjct: 115 AVTHNIMVKWFCKEGNVDEASNAMAKMSESGFLLIVLLISYNMMINGYCKAGKMAKAFKM 174
Query: 208 MKKIVAKSF 216
M ++ K
Sbjct: 175 MDEMGRKGL 183
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 204 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 263
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 264 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 323
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 324 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 375
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 143 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 201
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 202 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 261
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 262 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 321
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 322 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 354
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 232 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 290
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 291 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 350
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 351 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 399
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 107 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 163
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 164 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 222
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 223 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 282
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 283 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 322
>Medtr2g104640.1 | PPR containing plant-like protein | HC |
chr2:45047143-45044400 | 20130731
Length = 487
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 20 LVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGI-VAEGDYVKLDELFDEMLVLGLIP 78
L K + A+ + +MK+ GI+ DVV Y IV+ I V++G + +F EM LGL P
Sbjct: 274 LSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVSQGVDFSI-RMFCEMKDLGLNP 332
Query: 79 DVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVM 138
V TYN I LC + EA+ ++ +M + GC PN V+ C L K K ++
Sbjct: 333 TVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNAVSYQ------CFFACLEKPKFII 386
Query: 139 K---EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
+ M GV + TY ++L + L+ M + P +S ++ +I +
Sbjct: 387 ELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEELGCSPDASAYNALIDAL 446
Query: 196 CQKGLINEALELMKKIVAKSFAPGAR 221
+KGLI+ A + ++++AK +P R
Sbjct: 447 VEKGLIDMARKYDEEMLAKGLSPKPR 472
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M+ LG P V+ + +IR L R +AL ++ M++DG P+ V Y + +
Sbjct: 325 MKDLGLNPTVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNAVSYQCFFACLEKPKF 384
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ ELFD M+ G+ P + TY + + + + + + M +LGC P+ N
Sbjct: 385 II---ELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEELGCSPDASAYNA 441
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGV 146
L+ AL E G + A+ +EM KG+
Sbjct: 442 LIDALVEKGLIDMARKYDEEMLAKGL 467
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K +EA+Q+V+ M +GC+P+ + N+L+ L
Sbjct: 281 LDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGR 340
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLK 178
AG + A V K M V N TY M+ A+ A +L+EM K
Sbjct: 341 AGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEK 392
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 105/213 (49%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 160 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 218
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 219 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 278
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F+++I +
Sbjct: 279 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTL 338
Query: 196 CQKGLINEALELMKKIVAK-SFAPGARAWEALL 227
+ G I++A + K + K S AP + +++
Sbjct: 339 GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMI 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 249 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 307
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N I L + ++D+A + +M K PN T
Sbjct: 308 KFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTY 367
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEI 166
N+++ C +A G++KEM G+ + ++ TY ++ EI
Sbjct: 368 NSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREI 416
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTI--VLSGIVAEGDYVKLDELFDEM 71
DM+ ++ + MD + IL +M+Q+ + + TI V+ V + +FD++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQESL---ITLNTIAKVMRRFVGARQWKDAVRIFDDL 180
Query: 72 LVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDL 131
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 181 QFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRV 239
Query: 132 SKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNI 191
+A ++EM G + +Y ++ + LL+EM + P T+ I
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 192 ICCMCQKGLINEALELMKKIVAKSFAPGARAWEALLLHSG 231
+C + + EAL++++++ A P + +L+ G
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLG 339
>Medtr3g108060.1 | PPR containing plant-like protein | HC |
chr3:49927588-49930323 | 20130731
Length = 441
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIK--PDVVCYTIVLSGIVAE 58
MR+ G P V + +I + A ++L QM+ G PDV YT+++S
Sbjct: 179 MRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPDVFTYTVLISSYCRY 238
Query: 59 GDYV------------KLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSM 106
G + + + LF M+ G++PDV YN I+G CK +V A+++ D M
Sbjct: 239 GVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYNALIDGCCKTYRVGRALELFDDM 298
Query: 107 IKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM------GLKGVEL-NLHTYRIMLDG 159
K GC PN VT ++ + ++ KA ++EM G G+ + + +Y ++
Sbjct: 299 KKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQRSNYDGENGIVVGSCSSYTPIIHA 358
Query: 160 LVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIIC 193
L + +A L E++ PR T+ ++C
Sbjct: 359 LCEVGRVADAWSFLVELIDNGSVPREYTY-KLVC 391
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 14 TDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLV 73
T +I+ L ++ +AL +M+Q G KPDV Y +++ + + G++ K L +M +
Sbjct: 157 TCLIKLLGEQGLAKEALLTFYRMRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMEL 216
Query: 74 LGL--IPDVYTYNVYINGLCK------------QNKVDEAIQIVDSMIKLGCKPNVVTCN 119
G PDV+TY V I+ C+ + ++ EA ++ M+ G P+VV N
Sbjct: 217 PGFHSPPDVFTYTVLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYN 276
Query: 120 TLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ C+ + +A + +M +G N TY + EI +A L EM +
Sbjct: 277 ALIDGCCKTYRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQRS 336
Query: 180 CFYPRS-------STFDNIICCMCQKGLINEALELMKKIVAKSFAP 218
+ + S++ II +C+ G + +A + +++ P
Sbjct: 337 NYDGENGIVVGSCSSYTPIIHALCEVGRVADAWSFLVELIDNGSVP 382
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 87 INGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGV 146
I L +Q EA+ M + GCKP+V N L+ A+C G+ +KA+ ++++M L G
Sbjct: 160 IKLLGEQGLAKEALLTFYRMRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGF 219
Query: 147 E--LNLHTYRIMLDGLVG------------KAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
++ TY +++ + + EA+ L M+ K P ++ +I
Sbjct: 220 HSPPDVFTYTVLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYNALI 279
Query: 193 CCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
C+ + ALEL + + P +++ +
Sbjct: 280 DGCCKTYRVGRALELFDDMKKRGCVPNRVTYDSFI 314
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P + +T ++ +E A I QM++ G++PDV Y ++ G E+
Sbjct: 275 PNICTYTALVNAFAREGLCEKAEEIFEQMQEAGLEPDVYAYNALMEAYSRAGFPYGAAEI 334
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
F M +G PD +YN+ ++ K D+A + ++M ++G P + + LL A +
Sbjct: 335 FSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHMVLLSAYSK 394
Query: 128 AGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGK-AEIGEASLLLEEMLKKCFYPRSS 186
G+++K + ++ +M G++L+ ML+ L G+ + G+ +L M K + S
Sbjct: 395 MGNVTKCEDILNQMCKSGLKLDTFVLNSMLN-LYGRLGQFGKMEEVLTVMEKGSYVVDIS 453
Query: 187 TFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEA 225
TF+ +I Q G I + E + ++ K P W +
Sbjct: 454 TFNILIHRYGQAGFIEKMEEQFQLLLTKGLKPDVVTWTS 492
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 38 QDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVD 97
+ KPDV+CY +++ + Y + + + ++ IP+ TY + I C K+
Sbjct: 130 RSSFKPDVICYNLLIDAFGQKFLYKEAESTYLQLHEARCIPNEDTYALLIKAYCMSGKLQ 189
Query: 98 EAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIML 157
A + M G + V N + L + G+ KA+ + K M G +L+L +Y ML
Sbjct: 190 SAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNFDKAEEIFKRMKRDGCKLSLESY-TML 248
Query: 158 DGLVGKAEIGEASL-LLEEMLKKCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSF 216
L GKA +L + +EML + P T+ ++ ++GL +A E+ +++
Sbjct: 249 INLYGKAGKSYMALKVFDEMLSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQMQEAGL 308
Query: 217 APGARAWEALL 227
P A+ AL+
Sbjct: 309 EPDVYAYNALM 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G + +T +I K + AL + ++M KP++ YT +++ EG
Sbjct: 233 MKRDGCKLSLESYTMLINLYGKAGKSYMALKVFDEMLSQKCKPNICTYTALVNAFAREGL 292
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
K +E+F++M GL PDVY YN + + A +I M +GC+P+ + N
Sbjct: 293 CEKAEEIFEQMQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 352
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKC 180
L+ A +AG A+ V + M G+ + ++ ++L + + +L +M K
Sbjct: 353 LVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHMVLLSAYSKMGNVTKCEDILNQMCKSG 412
Query: 181 FYPRSSTFD---NIICCMCQKGLINEALELMKK 210
+ + N+ + Q G + E L +M+K
Sbjct: 413 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEK 445
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+ +M+ G+ V Y ++G++ G++ K +E+F M G + +Y + IN
Sbjct: 194 VFAEMRNYGLPSSAVVYNAYINGLMKGGNFDKAEEIFKRMKRDGCKLSLESYTMLINLYG 253
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLH 151
K K A+++ D M+ CKPN+ T L+ A G KA+ + ++M G+E +++
Sbjct: 254 KAGKSYMALKVFDEMLSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQMQEAGLEPDVY 313
Query: 152 TYRIMLDGL------VGKAEI 166
Y +++ G AEI
Sbjct: 314 AYNALMEAYSRAGFPYGAAEI 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
MR G + + I L+K A I +MK+DG K + YT++++ G
Sbjct: 198 MRNYGLPSSAVVYNAYINGLMKGGNFDKAEEIFKRMKRDGCKLSLESYTMLINLYGKAGK 257
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
++FDEML P++ TY +N ++ ++A +I + M + G +P+V N
Sbjct: 258 SYMALKVFDEMLSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQMQEAGLEPDVYAYNA 317
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKK 179
L+ A AG A + M G E + +Y I++D GKA + + + E +K+
Sbjct: 318 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDA-YGKAGFQDDAEAVFENMKR 375
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 3 KLGFCPGVMDFTDMI-----RFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVA 57
+ F P V+ + +I +FL KE ++ Y+ Q+ + P+ Y +++
Sbjct: 130 RSSFKPDVICYNLLIDAFGQKFLYKE---AESTYL--QLHEARCIPNEDTYALLIKAYCM 184
Query: 58 EGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVT 117
G + +F EM GL YN YINGL K D+A +I M + GCK ++ +
Sbjct: 185 SGKLQSAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNFDKAEEIFKRMKRDGCKLSLES 244
Query: 118 CNTLLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEML 177
L+ +AG A V EM + + N+ TY +++ + +A + E+M
Sbjct: 245 YTMLINLYGKAGKSYMALKVFDEMLSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQMQ 304
Query: 178 KKCFYPRSSTFDNIICCMCQKGLINEALELM 208
+ P ++ ++ + G A E+
Sbjct: 305 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIF 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGD 60
M++ G P V + ++ + A I + M+ G +PD Y I++ G
Sbjct: 303 MQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGF 362
Query: 61 YVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNT 120
+ +F+ M +G+ P + ++ V ++ K V + I++ M K G K + N+
Sbjct: 363 QDDAEAVFENMKRVGITPTMKSHMVLLSAYSKMGNVTKCEDILNQMCKSGLKLDTFVLNS 422
Query: 121 LLGALCEAGDLSKAKGVMKEMGLKGVELNLHTYRIMLD--GLVGKAEIGEASLLLEEMLK 178
+L G K + V+ M +++ T+ I++ G G E E L +L
Sbjct: 423 MLNLYGRLGQFGKMEEVLTVMEKGSYVVDISTFNILIHRYGQAGFIEKMEEQFQL--LLT 480
Query: 179 KCFYPRSSTFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
K P T+ + I +K L + LE+ ++++ P + LL
Sbjct: 481 KGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDAGCYPDGGTAKVLL 529
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 32 ILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLGLIPDVYTYNVYINGLC 91
+L M++ D+ + I++ G K++E F +L GL PDV T+ I
Sbjct: 439 VLTVMEKGSYVVDISTFNILIHRYGQAGFIEKMEEQFQLLLTKGLKPDVVTWTSRIGAYS 498
Query: 92 KQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAKGVMKEM 141
K+ + ++I + MI GC P+ T LL A + + V++ M
Sbjct: 499 KKKLYLKCLEIFEEMIDAGCYPDGGTAKVLLAACSNEDQIEQVTSVIRTM 548
>Medtr7g029515.1 | PPR containing plant protein | HC |
chr7:10579080-10580534 | 20130731
Length = 484
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 8 PGVMDFTDMIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDEL 67
P F +I R +A + + +MK G +P V+ Y+ ++ E ++ ++ +L
Sbjct: 204 PNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 263
Query: 68 FDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCE 127
DEM P+V TY + L K K DEA+Q+V+ M +GC+P+ + N+ + L
Sbjct: 264 LDEMQAQNCSPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTLGR 323
Query: 128 AGDLSKAKGVMK-EMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCF-YPRS 185
AG + A V K M V N TY M+ A A +L+EM K P
Sbjct: 324 AGRIDDATYVFKVAMPKANVAPNTSTYNSMVSMFCYYAREERAFGILKEMEKSGLCKPDI 383
Query: 186 STFDNII 192
TF +I
Sbjct: 384 QTFHPLI 390
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 16 MIRFLVKEERGMDALYILNQMKQDGIKPDVVCYTIVLSGIVAEGDYVKLDELFDEMLVLG 75
++R V + DA+ I + ++ G++ + ++L + E + E++ E L
Sbjct: 143 VMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLE-LKHY 201
Query: 76 LIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLSKAK 135
+ P+ +T+N+ I+G C +V+EA + M GC+P V++ +T++ C+ + +
Sbjct: 202 IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVY 261
Query: 136 GVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNIICCM 195
++ EM + N+ TY ++ L + EA ++E M P + F++ I +
Sbjct: 262 DLLDEMQAQNCSPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTL 321
Query: 196 CQKGLINEALELMKKIVAKS-FAPGARAWEALL 227
+ G I++A + K + K+ AP + +++
Sbjct: 322 GRAGRIDDATYVFKVAMPKANVAPNTSTYNSMV 354
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 1 MRKLGFCPGVMDFTDMIRFLVKEERGMDALY-ILNQMKQDGIKPDVVCYTIVLSGIVAEG 59
M+ G P V+ ++ +I+ +E+ D +Y +L++M+ P+VV YT ++ +
Sbjct: 232 MKGYGCRPCVISYSTIIQCYCQEQ-NFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAE 290
Query: 60 DYVKLDELFDEMLVLGLIPDVYTYNVYINGLCKQNKVDEAIQIVD-SMIKLGCKPNVVTC 118
+ + ++ + M +G PD +N +I L + ++D+A + +M K PN T
Sbjct: 291 KFDEALQVVERMNAVGCRPDTLFFNSFIYTLGRAGRIDDATYVFKVAMPKANVAPNTSTY 350
Query: 119 NTLLGALCEAGDLSKAKGVMKEMGLKGV-ELNLHTYRIMLDGLVGKAEIGEA-SLLLEEM 176
N+++ C +A G++KEM G+ + ++ T+ ++ EI + +L +M
Sbjct: 351 NSMVSMFCYYAREERAFGILKEMEKSGLCKPDIQTFHPLIKSCFKMREIDTWLNDILNDM 410
Query: 177 LKKCFYPRS-STFDNIICCMCQKGLINEALELMKKIVAKSFAPGARAWEALL 227
+ K ST+ +I +C+ A +L +++V + P + LL
Sbjct: 411 VNKYQIGLDLSTYSLLIHGLCRADRCKWAFDLFEEMVDQDIVPRYKTCRLLL 462
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 15 DMIRFLVKEERGMDALY-ILNQMKQDG-IKPDVVCYTIVLSGIVAEGDYVKLDELFDEML 72
DM+ ++ + MD + IL +M+Q+ I D + V+ V + +FD++
Sbjct: 107 DMMVDILGRMKAMDKMREILEEMRQESLITLDTIAK--VMRRFVGARQWKDAVRIFDDLQ 164
Query: 73 VLGLIPDVYTYNVYINGLCKQNKVDEAIQIVDSMIKLGCKPNVVTCNTLLGALCEAGDLS 132
LGL + + NV ++ LCK+ V++A +I + K PN T N L+ C +
Sbjct: 165 FLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVE 223
Query: 133 KAKGVMKEMGLKGVELNLHTYRIMLDGLVGKAEIGEASLLLEEMLKKCFYPRSSTFDNII 192
+A ++EM G + +Y ++ + LL+EM + P T+ I+
Sbjct: 224 EAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIM 283
Query: 193 CCMCQKGLINEALELMKKIVAKSFAP 218
C + + +EAL++++++ A P
Sbjct: 284 CALAKAEKFDEALQVVERMNAVGCRP 309