Miyakogusa Predicted Gene
- Lj0g3v0039969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0039969.1 Non Characterized Hit- tr|I1L5K1|I1L5K1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2929
PE=,63.09,0,SEC31,NULL; SEC31-RELATED PROTEIN,NULL; no
description,WD40/YVTN repeat-like-containing domain; WD_R,CUFF.1820.1
(425 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g045577.1 | protein transporter Sec31 | HC | chr4:15341247... 427 e-119
Medtr8g080700.1 | glutamate-rich WD repeat protein | HC | chr8:3... 67 2e-11
Medtr2g085210.4 | ubiquitin ligase cop1, putative | HC | chr2:33... 67 2e-11
Medtr2g085210.1 | ubiquitin ligase cop1, putative | HC | chr2:33... 67 2e-11
Medtr2g085210.2 | ubiquitin ligase cop1, putative | HC | chr2:33... 67 2e-11
Medtr5g024090.1 | glutamate-rich WD repeat protein | HC | chr5:9... 64 4e-10
Medtr7g084810.1 | transducin/WD-like repeat-protein | HC | chr7:... 62 1e-09
Medtr4g096880.1 | nucleosome/chromatin assembly factor group pro... 59 1e-08
Medtr8g027985.1 | ubiquitin ligase cop1, putative | HC | chr8:10... 58 1e-08
Medtr5g085250.3 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 58 2e-08
Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 58 2e-08
Medtr5g085250.2 | E3 ubiquitin-protein ligase COP1 | HC | chr5:3... 58 2e-08
Medtr5g016370.1 | transducin family protein/WD-40 repeat protein... 57 2e-08
Medtr4g073080.1 | nucleosome/chromatin assembly factor group pro... 56 8e-08
Medtr5g016350.2 | transducin family protein/WD-40 repeat protein... 55 1e-07
Medtr5g016350.1 | transducin family protein/WD-40 repeat protein... 55 1e-07
Medtr5g090420.1 | transducin/WD40 repeat protein | HC | chr5:393... 54 2e-07
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 54 3e-07
Medtr3g115200.1 | transducin/WD-like repeat-protein | HC | chr3:... 54 3e-07
Medtr3g092840.1 | transparent testa glabra protein | HC | chr3:4... 53 5e-07
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 53 7e-07
Medtr5g009530.5 | ubiquitin ligase cop1, putative | HC | chr5:23... 52 7e-07
Medtr5g009530.2 | ubiquitin ligase cop1, putative | HC | chr5:23... 52 7e-07
Medtr5g009530.1 | ubiquitin ligase cop1, putative | HC | chr5:23... 52 7e-07
Medtr5g009530.3 | ubiquitin ligase cop1, putative | HC | chr5:23... 52 9e-07
Medtr3g449990.1 | transducin/WD40 repeat protein | HC | chr3:171... 52 9e-07
Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC... 52 1e-06
Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC... 52 1e-06
Medtr1g054300.1 | WD-40 repeat protein/notchless protein, putati... 52 1e-06
Medtr4g011950.1 | coatomer subunit beta-like protein | HC | chr4... 51 2e-06
Medtr7g053100.1 | transducin family protein/WD-40 repeat protein... 51 2e-06
Medtr3g115200.2 | transducin/WD-like repeat-protein | HC | chr3:... 51 2e-06
Medtr3g067940.1 | cell cycle switch protein CCS52a | HC | chr3:3... 51 3e-06
Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like... 50 3e-06
Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor |... 50 4e-06
Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor |... 50 4e-06
Medtr4g105700.1 | transducin/WD40 repeat protein | HC | chr4:438... 50 6e-06
>Medtr4g045577.1 | protein transporter Sec31 | HC |
chr4:15341247-15326633 | 20130731
Length = 1124
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/354 (63%), Positives = 257/354 (72%), Gaps = 39/354 (11%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVES 60
M K VNRS LVAL+PD +LAAGTMAG VD +FS S LEIF++D SDD ELPLV
Sbjct: 1 MACIKGVNRSALVALAPDAPYLAAGTMAGAVDLSFSSSANLEIFKIDFQSDDPELPLVAE 60
Query: 61 YRSPHRFSRLSWGKNDSVSK--SRGLVAGGLFDGEIHLWS--------ENQSATV--LVR 108
Y S RF+RLSWG+N S S+ + GLVAGGL DG I LW+ EN+S+ V LVR
Sbjct: 61 YPSSDRFNRLSWGRNGSSSEEFALGLVAGGLVDGNIDLWNPLSLIRSEENESSLVGHLVR 120
Query: 109 HKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD--------SASQGEISFLSW 160
HKGPVRGLEF++ PNLLASGAEDG+ICIWDLAN LEP SASQGE+SFLSW
Sbjct: 121 HKGPVRGLEFNSIAPNLLASGAEDGEICIWDLANPLEPTHFPPLKGSGSASQGEVSFLSW 180
Query: 161 NSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIAS-EDD 219
NS+VQHILASTSY+GT VVWD K K VIS D VRRR S LQW+PD+ TQL +AS ED
Sbjct: 181 NSKVQHILASTSYNGTTVVWDLKKQKSVISVVDPVRRRGSALQWHPDVATQLAVASDEDG 240
Query: 220 SP-LRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGG 278
SP ++LWD+R TM P+ EFVGH+RGVI M+WCPND + LLTCGKDSRTICW+TISGE
Sbjct: 241 SPSIKLWDMRNTMTPVKEFVGHSRGVIAMSWCPNDSSYLLTCGKDSRTICWDTISGE--- 297
Query: 279 QIAYELPTGTRWNFDVHWCPETPGVISASSFDGRIDGVISVCSFEGKIGMYKIK 332
IAYELP GT WNFDVHW + PGVISASSFD KIG+Y IK
Sbjct: 298 -IAYELPAGTNWNFDVHWYSKIPGVISASSFD-------------VKIGIYNIK 337
>Medtr8g080700.1 | glutamate-rich WD repeat protein | HC |
chr8:34739832-34734055 | 20130731
Length = 469
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 84 LVAGGLFDGE----IHLWSENQSATVLVR------HKGPVRGLEFHTTEPNLLASGAEDG 133
LV G L G+ I+LW +AT + H V L++ TEP++ AS + D
Sbjct: 234 LVPGRLVSGDCNNSIYLWEPTSAATWNIEKTPFTGHTDSVEDLQWSPTEPHVFASCSVDK 293
Query: 134 QICIWDLANALEPKDS--ASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQ---V 188
I IWD P S A + +++ LSWN +LAS S DGT+ + D + LK+ V
Sbjct: 294 SIAIWDTRLGRSPAASFQAHKADVNVLSWNRLASCMLASGSDDGTISIRDLRLLKEGDSV 353
Query: 189 ISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRF 229
++ + + + ++W+P + L ++S D+ L +WDL
Sbjct: 354 VAHFEYHKHPITSIEWSPHEASSLAVSSADNQ-LTIWDLSL 393
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 98/239 (41%), Gaps = 29/239 (12%)
Query: 101 QSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANAL-----EPKDSASQGEI 155
Q+ +HK +++ P L SG + I +W+ +A + + +
Sbjct: 214 QAPLQKFKHKDEGYAIDWSPLVPGRLVSGDCNNSIYLWEPTSAATWNIEKTPFTGHTDSV 273
Query: 156 SFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIA 215
L W+ H+ AS S D ++ +WDT+ + + + + ++L WN + + ++ +
Sbjct: 274 EDLQWSPTEPHVFASCSVDKSIAIWDTRLGRSPAASFQAHKADVNVLSWN-RLASCMLAS 332
Query: 216 SEDDSPLRLWDLRFTM---APIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN-- 270
DD + + DLR + + F H + + W P++ +SL D++ W+
Sbjct: 333 GSDDGTISIRDLRLLKEGDSVVAHFEYHKHPITSIEWSPHEASSLAVSSADNQLTIWDLS 392
Query: 271 ---------TISGEGGGQI--AYELP-------TGTRWNFDVHWCPETPGVISASSFDG 311
+ Q+ +LP G + ++HW + PG+I ++ DG
Sbjct: 393 LEKDEEEEAEFRAKTQEQVNAPEDLPPQLLFIHQGQKDPKELHWHTQIPGMIVCTAADG 451
>Medtr2g085210.4 | ubiquitin ligase cop1, putative | HC |
chr2:33258450-33252948 | 20130731
Length = 875
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 26/232 (11%)
Query: 33 ETFSLSG---KLEIFRLD-LSSDDREL--PLVE-SYRSPHRFSRLSWGKNDSVSKSRGLV 85
E F+ +G K++IF D + DR++ P+VE + RS + S L W + + +
Sbjct: 578 EFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRS--KLSSLCWN-----TYIKSQI 630
Query: 86 AGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANA 143
A F+G + LW + +Q + + H+ V ++F + +P +LASG++DG + +W +
Sbjct: 631 ASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQG 690
Query: 144 LEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ 203
+ ++ + + + LA S D + +D +NL+ + + S ++
Sbjct: 691 VSIGTIKTKANVCCVQFPLDSARYLAFGSADHRIYYYDLRNLRVPLCTLVGHNKTVSYIK 750
Query: 204 WNPDIPTQLIIASEDDSPLRLWDL-----RFTMAPIMEFVGHT--RGVIGMT 248
+ ++ L+ AS D++ L+LWDL R +PI F GHT + +G++
Sbjct: 751 FVDNV--NLVSASTDNT-LKLWDLSTCTSRVVDSPIQSFTGHTNVKNFVGLS 799
>Medtr2g085210.1 | ubiquitin ligase cop1, putative | HC |
chr2:33258325-33253004 | 20130731
Length = 875
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 26/232 (11%)
Query: 33 ETFSLSG---KLEIFRLD-LSSDDREL--PLVE-SYRSPHRFSRLSWGKNDSVSKSRGLV 85
E F+ +G K++IF D + DR++ P+VE + RS + S L W + + +
Sbjct: 578 EFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRS--KLSSLCWN-----TYIKSQI 630
Query: 86 AGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANA 143
A F+G + LW + +Q + + H+ V ++F + +P +LASG++DG + +W +
Sbjct: 631 ASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQG 690
Query: 144 LEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ 203
+ ++ + + + LA S D + +D +NL+ + + S ++
Sbjct: 691 VSIGTIKTKANVCCVQFPLDSARYLAFGSADHRIYYYDLRNLRVPLCTLVGHNKTVSYIK 750
Query: 204 WNPDIPTQLIIASEDDSPLRLWDL-----RFTMAPIMEFVGHT--RGVIGMT 248
+ ++ L+ AS D++ L+LWDL R +PI F GHT + +G++
Sbjct: 751 FVDNV--NLVSASTDNT-LKLWDLSTCTSRVVDSPIQSFTGHTNVKNFVGLS 799
>Medtr2g085210.2 | ubiquitin ligase cop1, putative | HC |
chr2:33258303-33252948 | 20130731
Length = 875
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 26/232 (11%)
Query: 33 ETFSLSG---KLEIFRLD-LSSDDREL--PLVE-SYRSPHRFSRLSWGKNDSVSKSRGLV 85
E F+ +G K++IF D + DR++ P+VE + RS + S L W + + +
Sbjct: 578 EFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRS--KLSSLCWN-----TYIKSQI 630
Query: 86 AGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANA 143
A F+G + LW + +Q + + H+ V ++F + +P +LASG++DG + +W +
Sbjct: 631 ASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQG 690
Query: 144 LEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ 203
+ ++ + + + LA S D + +D +NL+ + + S ++
Sbjct: 691 VSIGTIKTKANVCCVQFPLDSARYLAFGSADHRIYYYDLRNLRVPLCTLVGHNKTVSYIK 750
Query: 204 WNPDIPTQLIIASEDDSPLRLWDL-----RFTMAPIMEFVGHT--RGVIGMT 248
+ ++ L+ AS D++ L+LWDL R +PI F GHT + +G++
Sbjct: 751 FVDNV--NLVSASTDNT-LKLWDLSTCTSRVVDSPIQSFTGHTNVKNFVGLS 799
>Medtr5g024090.1 | glutamate-rich WD repeat protein | HC |
chr5:9647473-9652782 | 20130731
Length = 455
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 45/247 (18%)
Query: 82 RGLVAGGLFDGEIHLWSENQSAT------VLVRHKGPVRGLEFHTTEPNLLASGAEDGQI 135
+ G + I+LW +AT H G V L++ + +P++ AS + D I
Sbjct: 228 HACLLSGDCNNNIYLWEPTSAATWNIDQTPFTGHTGSVEDLQW-SPKPDVFASCSVDKSI 286
Query: 136 CIWDLANALEPKDS--ASQGEISFLSWNSQ---VQHILASTSYDGTMVVWDTKNLKQ--- 187
IWD P+ + A +++ +SWN ++LAS S DG++ V D ++L++
Sbjct: 287 AIWDTRCRRSPRLTFIAHNADVNVISWNRSAGYTSNLLASGSDDGSISVHDLRSLQEGKD 346
Query: 188 -VISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIME--FVGHTRGV 244
V++ + + + ++WNPD + ++S D+ L +WDL E F+ +G
Sbjct: 347 PVVAHFEYHKHPITSIEWNPDNTSSFAVSSSDNQ-LTIWDLSVERDEEEEAEFIARNQGQ 405
Query: 245 IGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETPGVI 304
+ P D L + G ++ ++HW P+ PG+I
Sbjct: 406 VR---APEDLPPQLLF-----------------------IHQGQKYPKELHWHPKIPGMI 439
Query: 305 SASSFDG 311
+++ DG
Sbjct: 440 VSTAADG 446
>Medtr7g084810.1 | transducin/WD-like repeat-protein | HC |
chr7:32739181-32737587 | 20130731
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 111 GPVRGLEFHTTEPNLLASGAEDGQICIWDL-ANALEPKDSASQGEISFLSWNSQVQHILA 169
GP+ +++ EP + + + D IWD+ ++ + A E+ ++W + A
Sbjct: 142 GPITSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDIAWGGV--GVFA 199
Query: 170 STSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ--WNPDIPTQLIIASEDDSPLRLWDL 227
S S DG++ V+D ++ + +S +++ WN P + D + + + D+
Sbjct: 200 SVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDI 259
Query: 228 RFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
RF P++E H V + W P+ + T G DS+ + W+
Sbjct: 260 RFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 302
>Medtr4g096880.1 | nucleosome/chromatin assembly factor group
protein | HC | chr4:38572918-38568681 | 20130731
Length = 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 115 GLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-------SASQGEISFLSWNSQVQHI 167
GL + + L SG++D QIC+WD+ + K +G + ++W+ + +++
Sbjct: 183 GLSWSKFKQGHLLSGSDDAQICLWDINGTPKNKSLDAHQIFKVHEGVVEDVAWHLRHEYL 242
Query: 168 LASTSYDGTMVVWD------TKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSP 221
S D ++VWD TK ++ I+ + V + L +NP ++ D
Sbjct: 243 FGSVGDDQYLLVWDLRTPSVTKPVQSCIAHSSEV----NCLAFNP-FNEWIVATGSTDKT 297
Query: 222 LRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
++LWDLR + F H V + W P + L +C R + W+
Sbjct: 298 VKLWDLRKIGNVLHTFDCHKEEVFQVGWNPKNETVLASCCLGRRLMVWD 346
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 31/226 (13%)
Query: 70 LSWGKNDSVSKSRGLVAGGLFDGEIHLWSEN--------QSATVLVRHKGPVRGLEFHTT 121
LSW K +G + G D +I LW N + + H+G V + +H
Sbjct: 184 LSWSK-----FKQGHLLSGSDDAQICLWDINGTPKNKSLDAHQIFKVHEGVVEDVAWHLR 238
Query: 122 EPNLLASGAEDGQICIWDL--ANALEPKDS--ASQGEISFLSWNSQVQHILASTSYDGTM 177
L S +D + +WDL + +P S A E++ L++N + I+A+ S D T+
Sbjct: 239 HEYLFGSVGDDQYLLVWDLRTPSVTKPVQSCIAHSSEVNCLAFNPFNEWIVATGSTDKTV 298
Query: 178 VVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTM------ 231
+WD + + V+ D + + WNP T L L +WDL
Sbjct: 299 KLWDLRKIGNVLHTFDCHKEEVFQVGWNPKNETVLASCCLGRR-LMVWDLSRIDEEQSPE 357
Query: 232 -----APIMEFV--GHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
P + F+ GHT + +W P + + + +D+ W
Sbjct: 358 DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQ 403
>Medtr8g027985.1 | ubiquitin ligase cop1, putative | HC |
chr8:10311061-10316451 | 20130731
Length = 964
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 2 ELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLD-LSSD--DRELPLV 58
+L N ++ DE ++AAG +S K++IF L+ +SSD D + P+V
Sbjct: 645 DLLSSANVICALSFDRDEDYIAAG----------GISKKIKIFDLNAISSDSTDIQYPVV 694
Query: 59 ESYRSPHRFSRLSWGKNDSVSKSRGLVAGGLFDGEIHLWSEN--QSATVLVRHKGPVRGL 116
E + + S + W S + +A +DG + +W Q + + H+ +
Sbjct: 695 E-MSNKSKLSCVCWN-----SYIKNHLASTDYDGVVQMWDAGTGQPLSQYMEHQKRAWSV 748
Query: 117 EFHTTEPNLLASGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGT 176
F ++P + ASG++D + +W+++ S + + ++ ++L S D
Sbjct: 749 HFSASDPKMFASGSDDCSVKLWNISERNSIGTIMSPANVCCVQFSEYSTNLLFFGSADYK 808
Query: 177 MVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTM----- 231
+ +D +N K + S +++ I Q ++++ D+ L+LWDL+ T
Sbjct: 809 VYGYDLRNTKIPWCTLPGHGKAVSYVKF---IDAQTVVSASTDNSLKLWDLKKTSSAELS 865
Query: 232 --APIMEFVGHTRG--VIGMTWCPNDGASLLTCGKDSRTI-CWN 270
A + F GH+ G +G++ DG + CG +S + C++
Sbjct: 866 SDACDLTFRGHSNGKNFVGLSVL--DG--YIACGSESNEVYCYH 905
>Medtr5g085250.3 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796040-36807238 | 20130731
Length = 540
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 32 DETFSLSG---KLEIFRLDLSS-----DDRELPLVE-SYRSPHRFSRLSWGKNDSVSKSR 82
D+ F+ +G ++++F D S+ D P+VE + RS + S LSW K ++
Sbjct: 248 DDLFATAGVSRRIKVF--DFSAVVNEPTDAHCPVVEMTTRS--KLSCLSWNKY-----AK 298
Query: 83 GLVAGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDL 140
+A ++G + +W + +S H+ ++F T+P++L SG++D ++ +W
Sbjct: 299 NQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCT 358
Query: 141 ANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCS 200
+ + I + +N + +A S D + +D +N+ + + ++ S
Sbjct: 359 NQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFSGHKKAVS 418
Query: 201 ILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHT--RGVIGMT------WCPN 252
+++ + + ++ DS LRLWD++ + P+ F GH + +G+T C +
Sbjct: 419 YVKF---LSNDELASASTDSTLRLWDVKQNV-PVRTFRGHANEKNFVGLTVSSEYIACGS 474
Query: 253 DGASLLTCGKD-SRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETPGVISASS 308
+ + K+ S+ + W+ S E G+ + V W + P +++A+S
Sbjct: 475 ETNEVFVYHKEISKPLTWHRFSSPDMDDA--EDEAGSYFISAVCWKSDRPTILTANS 529
>Medtr5g085250.1 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796022-36807260 | 20130731
Length = 677
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 32 DETFSLSG---KLEIFRLDLSS-----DDRELPLVE-SYRSPHRFSRLSWGKNDSVSKSR 82
D+ F+ +G ++++F D S+ D P+VE + RS + S LSW K ++
Sbjct: 385 DDLFATAGVSRRIKVF--DFSAVVNEPTDAHCPVVEMTTRS--KLSCLSWNKY-----AK 435
Query: 83 GLVAGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDL 140
+A ++G + +W + +S H+ ++F T+P++L SG++D ++ +W
Sbjct: 436 NQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCT 495
Query: 141 ANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCS 200
+ + I + +N + +A S D + +D +N+ + + ++ S
Sbjct: 496 NQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFSGHKKAVS 555
Query: 201 ILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHT--RGVIGMT------WCPN 252
+++ + + ++ DS LRLWD++ + P+ F GH + +G+T C +
Sbjct: 556 YVKF---LSNDELASASTDSTLRLWDVKQNV-PVRTFRGHANEKNFVGLTVSSEYIACGS 611
Query: 253 DGASLLTCGKD-SRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETPGVISASS 308
+ + K+ S+ + W+ S E G+ + V W + P +++A+S
Sbjct: 612 ETNEVFVYHKEISKPLTWHRFSSPDMDDAEDE--AGSYFISAVCWKSDRPTILTANS 666
>Medtr5g085250.2 | E3 ubiquitin-protein ligase COP1 | HC |
chr5:36796040-36807238 | 20130731
Length = 573
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 134/296 (45%), Gaps = 33/296 (11%)
Query: 32 DETFSLSG---KLEIFRLDLSS-----DDRELPLVESYRSPHRFSRLSWGKNDSVSKSRG 83
D+ F+ +G ++++F D S+ D P+VE + + S LSW K ++
Sbjct: 281 DDLFATAGVSRRIKVF--DFSAVVNEPTDAHCPVVE-MTTRSKLSCLSWNKY-----AKN 332
Query: 84 LVAGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLA 141
+A ++G + +W + +S H+ ++F T+P++L SG++D ++ +W
Sbjct: 333 QIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTN 392
Query: 142 NALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSI 201
+ + I + +N + +A S D + +D +N+ + + ++ S
Sbjct: 393 QEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFSGHKKAVSY 452
Query: 202 LQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHT--RGVIGMT------WCPND 253
+++ + + ++ DS LRLWD++ + P+ F GH + +G+T C ++
Sbjct: 453 VKF---LSNDELASASTDSTLRLWDVKQNV-PVRTFRGHANEKNFVGLTVSSEYIACGSE 508
Query: 254 GASLLTCGKD-SRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETPGVISASS 308
+ K+ S+ + W+ S E G+ + V W + P +++A+S
Sbjct: 509 TNEVFVYHKEISKPLTWHRFSSPDMDDA--EDEAGSYFISAVCWKSDRPTILTANS 562
>Medtr5g016370.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5874227-5866099 | 20130731
Length = 595
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 89 LFDGEIHLWSENQSATVLVRHKGPVRGLEFHTTEPN-------------LLASGAEDGQI 135
+ +G L S+N ++VLV +RG TTE N LLA+G+ DGQ
Sbjct: 276 IAEGTRKLDSKNDPSSVLVLQH--IRGT---TTEKNKDVTTLDWNGEGTLLATGSYDGQA 330
Query: 136 CIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSV 195
IW L+ +G I L WN + +IL +DG+ +VWD + K F D
Sbjct: 331 RIWTTNGELKSTLCKHKGPIFSLKWNKKGDYILTG-GFDGSAIVWDVQAEKWKQQF-DFH 388
Query: 196 RRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGA 255
R + W ++ +S +D+ + + + P+ F GH V + W P G+
Sbjct: 389 RGSTLDVDWRNNVS---FASSSNDTMIHVCKIG-ENHPVKTFAGHQGEVNCIKWDPT-GS 443
Query: 256 SLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETPGV 303
L +C D+ W+ + ++ ++ + + W P PG
Sbjct: 444 ILASCSDDNTAKIWSMKQ----DKYIHDFREHSKEIYAIRWSPTGPGT 487
>Medtr4g073080.1 | nucleosome/chromatin assembly factor group
protein | HC | chr4:27640107-27642823 | 20130731
Length = 405
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 9/172 (5%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPK--DSASQGE-----ISFL 158
L H+ GL + + L SG+ D +IC+WD+ A E D+ E + +
Sbjct: 158 LKGHEKEGYGLSWSGFKNGYLLSGSNDHKICLWDVFGASESNVLDAVHVYEGHESVVEDV 217
Query: 159 SWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASED 218
SW+ +++ S D +++WD + K S R + + ++P L AS D
Sbjct: 218 SWHFHNENLFGSGGDDCKLIIWDLRTNKAQHSLKPH-EREVNFVSFSPYSEWILATASSD 276
Query: 219 DSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
+ + L+DLR P+ HT V + W PN L + D R + W+
Sbjct: 277 -TDIGLFDLRKLEVPLHFLSSHTDEVFQVEWDPNHEGVLASSSADRRLMVWD 327
>Medtr5g016350.2 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 519
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 122 EPNLLASGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWD 181
E LLA+GA DG IW L+ S +G I L WN + +IL S D T +VWD
Sbjct: 241 EGTLLATGAYDGYARIWTTNGELKSTLSKHKGAILSLKWNKKGDYILTG-SCDETAIVWD 299
Query: 182 TKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHT 241
+ K FA + W ++ +S D+ + + + PI F GH
Sbjct: 300 VQAEKWKQQFAFHKGPTLDV-DWRNNVS---FASSSTDTMIHVCKIGDNH-PIKTFEGHQ 354
Query: 242 RGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETP 301
V + W P G+ L +C D+ W+ + ++ ++ + + W P P
Sbjct: 355 SEVNCIKWDPT-GSLLASCSDDNTAKIWSMKQ----DKYIHDFREHSKEVYTIRWSPTGP 409
Query: 302 G--------VISASSFDGRI 313
G V++++SFD +
Sbjct: 410 GTNNPNKKLVLASASFDSTV 429
>Medtr5g016350.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 583
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 122 EPNLLASGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWD 181
E LLA+GA DG IW L+ S +G I L WN + +IL S D T +VWD
Sbjct: 305 EGTLLATGAYDGYARIWTTNGELKSTLSKHKGAILSLKWNKKGDYILTG-SCDETAIVWD 363
Query: 182 TKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHT 241
+ K FA + W ++ +S D+ + + + PI F GH
Sbjct: 364 VQAEKWKQQFAFHKGPTLDV-DWRNNVS---FASSSTDTMIHVCKIG-DNHPIKTFEGHQ 418
Query: 242 RGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPETP 301
V + W P G+ L +C D+ W+ + ++ ++ + + W P P
Sbjct: 419 SEVNCIKWDPT-GSLLASCSDDNTAKIWSMKQ----DKYIHDFREHSKEVYTIRWSPTGP 473
Query: 302 G--------VISASSFDGRI 313
G V++++SFD +
Sbjct: 474 GTNNPNKKLVLASASFDSTV 493
>Medtr5g090420.1 | transducin/WD40 repeat protein | HC |
chr5:39373338-39377755 | 20130731
Length = 572
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 77 SVSKSRGLVAGGLFDGEIHLWSENQSATVLVRHKGPVRGLE-----FHTTEPNLLASGAE 131
S+SK + L + EI+LW+ + ++ ++KG R F E +ASG+E
Sbjct: 439 SLSKDNKFLLVNLLNQEINLWNIEGNPKLIGKYKGHRRSRFIIRSCFGGLEQAFIASGSE 498
Query: 132 DGQICIWDLANALEPKDS--ASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVI 189
D Q+ IW ++ EP ++ G ++ +SWN H+LAS S D T+ +W +L +
Sbjct: 499 DSQVYIWHRSSG-EPIEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLNSLNKKY 557
Query: 190 SFADS 194
A S
Sbjct: 558 QHAHS 562
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLA--NALEPKDSASQGEISFLSWNSQ 163
V H V L+ +L +G ED ++ +W + NA+ S G I ++++S
Sbjct: 12 FVAHASAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSG-IDSVNFDSS 70
Query: 164 VQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
+ ++A+ + GT+ +WD + K V + R C+ + ++P + + D+ L+
Sbjct: 71 -EVLVAAGAASGTIKLWDLEEAKIVRTLTGH-RSNCTSVDFHPF--GEFFASGSLDTNLK 126
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGE 275
+WD+R I + GHTRGV + + P DG +++ G+D+ W+ +G+
Sbjct: 127 IWDIR-KKGCIHTYKGHTRGVNAIRFTP-DGRWVVSGGEDNTVKLWDLTAGK 176
>Medtr3g115200.1 | transducin/WD-like repeat-protein | HC |
chr3:53847316-53851987 | 20130731
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 131 EDGQICIWDL-----ANALEPKDSASQ-GEISFLSWNSQVQHILASTSYDGTMVVWDTKN 184
+D +C+W L ++ +DSA ++S +W+ + +A+TS + ++ WD +
Sbjct: 141 DDENLCLWSLDVSKKTAQVQSQDSAGMMHKLSGGAWDPHDMNSVAATS-ESSLQFWDVRT 199
Query: 185 LKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGV 244
+K+ +S S R + ++P +++ +E +S +R+WD R PI E GHT
Sbjct: 200 MKKTLSIECSHVRS---VDYHPR-KNNILVTAEHESGIRIWDQRKPKVPIQELPGHTHWT 255
Query: 245 IGMTWCPNDGASLLTCGKDSRTICWNT------ISGEGGGQIAYEL--PTGTRWN----- 291
+ P +L+ G DS W+ + E + + L P ++
Sbjct: 256 WIVKCNPEYDGMILSAGTDSTVNLWSASINHDELPTESQAESSVSLVDPLLNTYSDYEDS 315
Query: 292 -FDVHWCPETPGVISASSFDGRI 313
+ + W P + ++ S+DGR+
Sbjct: 316 IYGLTWSSRQPWIFASLSYDGRV 338
>Medtr3g092840.1 | transparent testa glabra protein | HC |
chr3:42443433-42441118 | 20130731
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 7/172 (4%)
Query: 111 GPVRGLEFHTTEPNLLASGAEDGQICIWDLAN-ALEPKDSASQGEISFLSWNSQVQHILA 169
P+ +++ EP + + + D IWD+ +E + A E+ ++W + A
Sbjct: 134 APLTSFDWNEIEPKRIGTSSIDTTCTIWDIERGVVETQLIAHDKEVYDIAWGES--RVFA 191
Query: 170 STSYDGTMVVWDTKNLKQVISFADSVRRRCSILQ--WNPDIPTQLIIASEDDSPLRLWDL 227
S S DG++ ++D ++ + +S + +L+ WN + D + + + D+
Sbjct: 192 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKKDLRYMATILMDSNKVVILDI 251
Query: 228 RFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN--TISGEGG 277
R P+ E H GV + W P + + G D++ + W ++G G
Sbjct: 252 RSPTTPVAELERHRAGVNAIAWAPRSSKHICSGGDDAQALIWELPAVAGPNG 303
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 85 VAGGLFDGEIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWD--- 139
+ G FD + +W +S V+ H PV ++F+ + +L+ SG+ DG IWD
Sbjct: 126 IVSGSFDETVRVWEVKTGKSVHVIKAHAMPVTSVDFNR-DGSLIVSGSHDGSCKIWDTNS 184
Query: 140 ---LANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVR 196
L ++ K A +SF ++ + IL +T D T+ +W+ + + ++ V
Sbjct: 185 GALLKTLIDDKVPA----VSFAKFSPNGKFILVATLND-TLKLWNYAAGRSLKMYSGHVN 239
Query: 197 RRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPND 253
R + + I++ +D L LWDL+ I + GHT VI +T P +
Sbjct: 240 RVYCLTSTFSVTNGRYIVSGSEDRCLYLWDLQ-QKNMIQKLEGHTDTVISVTCHPKE 295
>Medtr5g009530.5 | ubiquitin ligase cop1, putative | HC |
chr5:2302327-2311929 | 20130731
Length = 1034
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 37 LSGKLEIFRLDLSSDDR---ELPLVE-SYRSPHRFSRLSWGKNDSVSKSRGLVAGGLFDG 92
+S K++IF + +D P VE S RS + S + W S + +A +DG
Sbjct: 741 ISKKIKIFDFNTLCNDSVDIHYPAVEMSNRS--KLSCVCWN-----SYIKNYLASTDYDG 793
Query: 93 EIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDSA 150
+ LW S Q + H+ ++F P ASG++D + +W ++
Sbjct: 794 VVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIR 853
Query: 151 SQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPT 210
+ + + +++ H+LA S + + +D +NL+ R+ S +++ + +
Sbjct: 854 NVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKF---LDS 910
Query: 211 QLIIASEDDSPLRLWDLR-------FTMAPIMEFVGHT--RGVIGMTWCPNDGASLLTCG 261
+ ++++ D+ L++WDL T A + GHT + +G++ DG + CG
Sbjct: 911 ETLVSASTDNSLKIWDLNKTSSVGTSTSARSLTLSGHTNEKNFVGLSVA--DG--YIACG 966
Query: 262 KDSRTI 267
+S +
Sbjct: 967 SESNEV 972
>Medtr5g009530.2 | ubiquitin ligase cop1, putative | HC |
chr5:2302327-2311929 | 20130731
Length = 1034
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 37 LSGKLEIFRLDLSSDDR---ELPLVE-SYRSPHRFSRLSWGKNDSVSKSRGLVAGGLFDG 92
+S K++IF + +D P VE S RS + S + W S + +A +DG
Sbjct: 741 ISKKIKIFDFNTLCNDSVDIHYPAVEMSNRS--KLSCVCWN-----SYIKNYLASTDYDG 793
Query: 93 EIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDSA 150
+ LW S Q + H+ ++F P ASG++D + +W ++
Sbjct: 794 VVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIR 853
Query: 151 SQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPT 210
+ + + +++ H+LA S + + +D +NL+ R+ S +++ + +
Sbjct: 854 NVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKF---LDS 910
Query: 211 QLIIASEDDSPLRLWDLR-------FTMAPIMEFVGHT--RGVIGMTWCPNDGASLLTCG 261
+ ++++ D+ L++WDL T A + GHT + +G++ DG + CG
Sbjct: 911 ETLVSASTDNSLKIWDLNKTSSVGTSTSARSLTLSGHTNEKNFVGLSVA--DG--YIACG 966
Query: 262 KDSRTI 267
+S +
Sbjct: 967 SESNEV 972
>Medtr5g009530.1 | ubiquitin ligase cop1, putative | HC |
chr5:2302327-2311929 | 20130731
Length = 1034
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 37 LSGKLEIFRLDLSSDDR---ELPLVE-SYRSPHRFSRLSWGKNDSVSKSRGLVAGGLFDG 92
+S K++IF + +D P VE S RS + S + W S + +A +DG
Sbjct: 741 ISKKIKIFDFNTLCNDSVDIHYPAVEMSNRS--KLSCVCWN-----SYIKNYLASTDYDG 793
Query: 93 EIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDSA 150
+ LW S Q + H+ ++F P ASG++D + +W ++
Sbjct: 794 VVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIR 853
Query: 151 SQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPT 210
+ + + +++ H+LA S + + +D +NL+ R+ S +++ + +
Sbjct: 854 NVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKF---LDS 910
Query: 211 QLIIASEDDSPLRLWDLR-------FTMAPIMEFVGHT--RGVIGMTWCPNDGASLLTCG 261
+ ++++ D+ L++WDL T A + GHT + +G++ DG + CG
Sbjct: 911 ETLVSASTDNSLKIWDLNKTSSVGTSTSARSLTLSGHTNEKNFVGLSVA--DG--YIACG 966
Query: 262 KDSRTI 267
+S +
Sbjct: 967 SESNEV 972
>Medtr5g009530.3 | ubiquitin ligase cop1, putative | HC |
chr5:2302327-2311929 | 20130731
Length = 982
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 37 LSGKLEIFRLDLSSDDR---ELPLVE-SYRSPHRFSRLSWGKNDSVSKSRGLVAGGLFDG 92
+S K++IF + +D P VE S RS + S + W S + +A +DG
Sbjct: 741 ISKKIKIFDFNTLCNDSVDIHYPAVEMSNRS--KLSCVCWN-----SYIKNYLASTDYDG 793
Query: 93 EIHLW--SENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKDSA 150
+ LW S Q + H+ ++F P ASG++D + +W ++
Sbjct: 794 VVKLWDASTGQEFSQYSEHEKRAWSVDFSPVCPTKFASGSDDCTVKLWSISERNSLGTIR 853
Query: 151 SQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPT 210
+ + + +++ H+LA S + + +D +NL+ R+ S +++ + +
Sbjct: 854 NVANVCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKF---LDS 910
Query: 211 QLIIASEDDSPLRLWDLR-------FTMAPIMEFVGHT--RGVIGMTWCPNDGASLLTCG 261
+ ++++ D+ L++WDL T A + GHT + +G++ DG + CG
Sbjct: 911 ETLVSASTDNSLKIWDLNKTSSVGTSTSARSLTLSGHTNEKNFVGLSVA--DG--YIACG 966
Query: 262 KDSRTI 267
+S +
Sbjct: 967 SESNEV 972
>Medtr3g449990.1 | transducin/WD40 repeat protein | HC |
chr3:17129213-17120938 | 20130731
Length = 581
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 77 SVSKSRGLVAGGLFDGEIHLWSENQSATVLVRHKGPVRGLE-----FHTTEPNLLASGAE 131
S+SK + L + EIHLW+ ++ ++K R F + + +ASG+E
Sbjct: 446 SLSKDSRFLLVNLLNQEIHLWNIEGDLKLVGKYKSHRRSRFVIRSCFGGLKQSFIASGSE 505
Query: 132 DGQICIW-----DLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNL 185
D Q+ IW DL +AL P S G ++ +SWN H+LAS S D T+ +W K L
Sbjct: 506 DSQVYIWHRSSGDLVDAL-PGHS---GAVNCVSWNPANPHMLASASDDRTVRIWGLKCL 560
>Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623829 | 20130731
Length = 576
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 78/202 (38%), Gaps = 23/202 (11%)
Query: 122 EPNLLASGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWD 181
E LLA+G+ DGQ IW L+ S +G I L WN + +IL S D T +VWD
Sbjct: 298 EGTLLATGSYDGQARIWTTNGELKTTLSKHKGPIFSLKWNKRCDYILTG-SCDQTAIVWD 356
Query: 182 TK--NLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVG 239
K KQ F S + D T AS + P F G
Sbjct: 357 VKAEECKQQFGFH-------SGPTLDVDWRTNTSFASSSTDNMIYVCKIGENHPTQTFAG 409
Query: 240 HTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPE 299
H V + W P G L +C D W+ + ++ ++ + + W P
Sbjct: 410 HQGEVNCVKWDPT-GTLLASCSDDITAKIWSV----KQDKYLHDFREHSKEIYTIRWSPT 464
Query: 300 TPG--------VISASSFDGRI 313
PG +++++SFD +
Sbjct: 465 GPGTNNPNKKLLLASASFDSTV 486
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 56/220 (25%)
Query: 84 LVAGGLFDGEIHLWSEN-QSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLAN 142
L+A G +DG+ +W+ N + T L +HKGP+ L+++ + + +G+ D +WD+
Sbjct: 301 LLATGSYDGQARIWTTNGELKTTLSKHKGPIFSLKWN-KRCDYILTGSCDQTAIVWDV-K 358
Query: 143 ALEPKD-------------------------------------------SASQGEISFLS 159
A E K + QGE++ +
Sbjct: 359 AEECKQQFGFHSGPTLDVDWRTNTSFASSSTDNMIYVCKIGENHPTQTFAGHQGEVNCVK 418
Query: 160 WNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIP------TQLI 213
W+ +LAS S D T +W K K + F + + +I +W+P P +L+
Sbjct: 419 WDP-TGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTI-RWSPTGPGTNNPNKKLL 476
Query: 214 IASED-DSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPN 252
+AS DS ++LWD+ I GH V + + PN
Sbjct: 477 LASASFDSTVKLWDIELGKL-IHSLNGHRHPVYSVAFSPN 515
>Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623874 | 20130731
Length = 578
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 78/202 (38%), Gaps = 23/202 (11%)
Query: 122 EPNLLASGAEDGQICIWDLANALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWD 181
E LLA+G+ DGQ IW L+ S +G I L WN + +IL S D T +VWD
Sbjct: 300 EGTLLATGSYDGQARIWTTNGELKTTLSKHKGPIFSLKWNKRCDYILTG-SCDQTAIVWD 358
Query: 182 TK--NLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVG 239
K KQ F S + D T AS + P F G
Sbjct: 359 VKAEECKQQFGFH-------SGPTLDVDWRTNTSFASSSTDNMIYVCKIGENHPTQTFAG 411
Query: 240 HTRGVIGMTWCPNDGASLLTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVHWCPE 299
H V + W P G L +C D W+ + ++ ++ + + W P
Sbjct: 412 HQGEVNCVKWDPT-GTLLASCSDDITAKIWSV----KQDKYLHDFREHSKEIYTIRWSPT 466
Query: 300 TPG--------VISASSFDGRI 313
PG +++++SFD +
Sbjct: 467 GPGTNNPNKKLLLASASFDSTV 488
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 56/220 (25%)
Query: 84 LVAGGLFDGEIHLWSEN-QSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLAN 142
L+A G +DG+ +W+ N + T L +HKGP+ L+++ + + +G+ D +WD+
Sbjct: 303 LLATGSYDGQARIWTTNGELKTTLSKHKGPIFSLKWN-KRCDYILTGSCDQTAIVWDV-K 360
Query: 143 ALEPKD-------------------------------------------SASQGEISFLS 159
A E K + QGE++ +
Sbjct: 361 AEECKQQFGFHSGPTLDVDWRTNTSFASSSTDNMIYVCKIGENHPTQTFAGHQGEVNCVK 420
Query: 160 WNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIP------TQLI 213
W+ +LAS S D T +W K K + F + + +I +W+P P +L+
Sbjct: 421 WDP-TGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTI-RWSPTGPGTNNPNKKLL 478
Query: 214 IASED-DSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPN 252
+AS DS ++LWD+ I GH V + + PN
Sbjct: 479 LASASFDSTVKLWDIELGKL-IHSLNGHRHPVYSVAFSPN 517
>Medtr1g054300.1 | WD-40 repeat protein/notchless protein, putative
| HC | chr1:23359694-23368343 | 20130731
Length = 483
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 121 TEPNLLASGAEDGQICIWDLANALEPKD--SASQGEISFLSWNSQVQHILASTSYDGTMV 178
T P L SG++D + +W+ PK + Q ++ + ++ Q I AS S+D ++
Sbjct: 337 TAPERLVSGSDDFTMFLWEPFINKHPKTRMTGHQQLVNHVYFSPDGQWI-ASASFDKSVK 395
Query: 179 VWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFV 238
+W+ K V +F V I W+ D ++L+++ DS L++WD+R T +
Sbjct: 396 IWNGTTGKFVTAFRGHVGPVYQI-SWSAD--SRLLLSGSKDSTLKVWDIR-TRKLKQDLP 451
Query: 239 GHTRGVIGMTWCPNDGASLLTCGKDSRTICW 269
GH V + W P DG + + GKD W
Sbjct: 452 GHADEVFSVDWSP-DGEKVASGGKDKVLKLW 481
>Medtr4g011950.1 | coatomer subunit beta-like protein | HC |
chr4:3146350-3132249 | 20130731
Length = 931
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 106 LVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDLANALEPKD-SASQGEISFLSWNSQV 164
L + V+ ++ H TEP +LAS G +CIW+ + K ++ + + ++
Sbjct: 11 LAQRSERVKSVDLHPTEPWILAS-LYSGTVCIWNYQSQTMAKSFEVTELPVRSAKFIARK 69
Query: 165 QHILASTSYDGTMVVWDTKNLKQVISF-ADSVRRRCSILQWNPDIPTQLIIASEDDSPLR 223
Q ++A D + V++ + +V F A S RC + +P +P +++S DD ++
Sbjct: 70 QWVVAGAD-DMFIRVYNYNTMDKVKVFEAHSDYIRCVAV--HPTLP--YVLSSSDDMLIK 124
Query: 224 LWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
LWD F GH+ V+ +T+ P D + + D WN
Sbjct: 125 LWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWN 171
>Medtr7g053100.1 | transducin family protein/WD-40 repeat protein |
HC | chr7:18684589-18686200 | 20130731
Length = 436
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 70 LSWGKNDSVSKSRGLVAGGLFDGEIHLWSENQSA----TVLVRHKGPVRGLEFHTTEPNL 125
L WG + +S + D I+ W+ + S+ + +GPV + + +
Sbjct: 126 LDWGSRNVLSIA--------LDHTIYFWNASDSSGSEFVTVDEEEGPVTSVCW-APDGRH 176
Query: 126 LASGAEDGQICIWDLA--NALEPKDSASQGEISFLSWNSQVQHILASTSYDGTMVVWDTK 183
LA G + + +WD A L + + L+WN H+L + DG +V D +
Sbjct: 177 LAVGLTNSHVQLWDTAANKQLRTLKGGHRARVGSLAWNG---HVLTTGGMDGKIVNNDVR 233
Query: 184 NLKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAP-----IMEFV 238
Q+I+ RR L+W+ D + + + +D+ + +WD+ + + F
Sbjct: 234 LRSQIINTYRGHRREVCGLKWSLD--GKQLASGGNDNVVHIWDMSAVSSNSPTRWLYRFD 291
Query: 239 GHTRGVIGMTWCPNDGASLLTCGKDSRTIC---WNTISGE 275
H V + WCP G +LL G C WNT GE
Sbjct: 292 EHKAAVKALAWCPFQG-NLLASGGGGGDCCVKLWNTGMGE 330
>Medtr3g115200.2 | transducin/WD-like repeat-protein | HC |
chr3:53847316-53851987 | 20130731
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 131 EDGQICIWDL-----ANALEPKDSASQ-GEISFLSWNSQVQHILASTSYDGTMVVWDTKN 184
+D +C+W L ++ +DSA ++S +W+ + +A+TS + ++ WD +
Sbjct: 141 DDENLCLWSLDVSKKTAQVQSQDSAGMMHKLSGGAWDPHDMNSVAATS-ESSLQFWDVRT 199
Query: 185 LKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGV 244
+K+ +S S R + ++P +++ +E +S +R+WD R PI E GHT
Sbjct: 200 MKKTLSIECSHVRS---VDYHPR-KNNILVTAEHESGIRIWDQRKPKVPIQELPGHTHWT 255
Query: 245 IGMTWCPNDGASLLTCGKDSRTICWN 270
+ P +L+ G DS W+
Sbjct: 256 WIVKCNPEYDGMILSAGTDSTVNLWS 281
>Medtr3g067940.1 | cell cycle switch protein CCS52a | HC |
chr3:30567275-30564377 | 20130731
Length = 479
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 70 LSWGKNDSVSKSRGLVAGGLFDGEIHLWSEN--QSATVLVRHKGPVRGLEFHTTEPNLLA 127
L W +D R L +GG D ++ +W+++ Q L H V+ + + + NLL
Sbjct: 302 LKWSCDD-----RELASGG-NDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLV 355
Query: 128 SGAEDGQICI--WDLANALEPKDSASQGEISFLSWNSQVQHILASTSY-DGTMVVWDTKN 184
SG CI W+ N + + ++ L+W+ V ++++ Y ++VW +
Sbjct: 356 SGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPS 415
Query: 185 LKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTM---APIME 236
L +V + R L +PD Q I+ D LR W++ +M AP+ +
Sbjct: 416 LAKVATLTGH-SMRVLYLAMSPD--GQTIVTGAGDETLRFWNVFPSMKTPAPVKD 467
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 94 IHLWSENQSATVLVRHKGPVRGL--EFHTTEPNLLASGAEDGQICIWDLANALEPKD-SA 150
++LWS + S + GP G+ T E + ++ G GQ+ IWD + +
Sbjct: 194 VYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGTNGGQVQIWDGTKCKKVRTMGG 253
Query: 151 SQGEISFLSWNSQVQHILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPT 210
Q L+WNS+ ILAS S D ++ D + I + L+W+ D
Sbjct: 254 HQTRTGVLAWNSR---ILASGSRDRNILQHDMRVPSDFIGKLVGHKSEVCGLKWSCD--D 308
Query: 211 QLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTIC-- 268
+ + + +D+ L +W+ + + P + HT V + W P+ ++LL G + C
Sbjct: 309 RELASGGNDNQLLVWN-QHSQQPTLRLTEHTAAVKAIAWSPHQ-SNLLVSGGGTADRCIR 366
Query: 269 -WNTISGE 275
WNT +G
Sbjct: 367 FWNTTNGH 374
>Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like
protein | HC | chr7:33509053-33512350 | 20130731
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 21/236 (8%)
Query: 84 LVAGGLFDGEIHLWS---ENQSATVLVRHKGPVRGLEFHTTEPNLLASGAEDGQICIWDL 140
+VA G D EI LW+ + ++ VL HK V L + T++ + S + D + +WD
Sbjct: 69 VVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHW-TSDGTQIISASPDKTLRLWDT 127
Query: 141 ANALEPKDSASQGEISFLSWNSQVQH---ILASTSYDGTMVVWDTKNLKQVISFADSVRR 197
+ K +S+++ + ++ S S DGT +WD + + +F D +
Sbjct: 128 ETGKQIKKMVEH--LSYVNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQ- 184
Query: 198 RCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGVIGMTWCPNDGASL 257
I + + I D+ +++WDLR M GH + M P DG+ L
Sbjct: 185 ---ITAVSFSDASDKIYTGGIDNDVKIWDLRKGEV-TMTLQGHQDMITSMQLSP-DGSYL 239
Query: 258 LTCGKDSRTICWNTISGEGGGQIAYELPTGTRWNFDVH-----WCPETPGVISASS 308
LT G D + W+ + ++ G + NF+ + W P+ V + SS
Sbjct: 240 LTNGMDCKLCIWD-MRPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSS 294
>Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 34/285 (11%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVE- 59
M +FK V SP +A + F + G + L+LSS+ LP+ E
Sbjct: 1 MPVFKTPFNGYSVKFSP----FYENRIAVATAQNFGILGNGRLHVLELSSNP-ALPITEI 55
Query: 60 -SYRSPHRFSRLSWGK-NDSVSKSRGLVAGGLFDGEIHLWSENQSATVLVRHKGPVRGLE 117
+Y + ++W + +DS++ + DG + L+ T P+R
Sbjct: 56 AAYDTADGIYDVTWSESHDSIT------VAAVADGSVKLYDLALPPT-----SNPIRSFH 104
Query: 118 FHTTEPNLL----------ASGAEDGQICIWDLANALEPKDSASQGEISFLS-WNSQVQH 166
HT E + + S A D + +W + + + S WN +
Sbjct: 105 EHTREVHSVDYNPVRRDSFLSAAWDDTVKLWTVDRPTSVRTFKEHAYCVYSSVWNPRHAD 164
Query: 167 ILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIAS-EDDSPLRLW 225
+ AS S D T+ +WD + + S WN + IIA+ D +++W
Sbjct: 165 VFASASGDCTVRIWDVREPGSTMILPAHEHEILS-CDWNKY--DECIIATGSVDKSVKVW 221
Query: 226 DLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
D+R P+ GH V + + P+ L++C D W+
Sbjct: 222 DVRSYRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSYDMTVCVWD 266
>Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 34/285 (11%)
Query: 1 MELFKEVNRSGLVALSPDEGFLAAGTMAGTVDETFSLSGKLEIFRLDLSSDDRELPLVE- 59
M +FK V SP +A + F + G + L+LSS+ LP+ E
Sbjct: 1 MPVFKTPFNGYSVKFSP----FYENRIAVATAQNFGILGNGRLHVLELSSNP-ALPITEI 55
Query: 60 -SYRSPHRFSRLSWGK-NDSVSKSRGLVAGGLFDGEIHLWSENQSATVLVRHKGPVRGLE 117
+Y + ++W + +DS++ + DG + L+ T P+R
Sbjct: 56 AAYDTADGIYDVTWSESHDSIT------VAAVADGSVKLYDLALPPT-----SNPIRSFH 104
Query: 118 FHTTEPNLL----------ASGAEDGQICIWDLANALEPKDSASQGEISFLS-WNSQVQH 166
HT E + + S A D + +W + + + S WN +
Sbjct: 105 EHTREVHSVDYNPVRRDSFLSAAWDDTVKLWTVDRPTSVRTFKEHAYCVYSSVWNPRHAD 164
Query: 167 ILASTSYDGTMVVWDTKNLKQVISFADSVRRRCSILQWNPDIPTQLIIAS-EDDSPLRLW 225
+ AS S D T+ +WD + + S WN + IIA+ D +++W
Sbjct: 165 VFASASGDCTVRIWDVREPGSTMILPAHEHEILS-CDWNKY--DECIIATGSVDKSVKVW 221
Query: 226 DLRFTMAPIMEFVGHTRGVIGMTWCPNDGASLLTCGKDSRTICWN 270
D+R P+ GH V + + P+ L++C D W+
Sbjct: 222 DVRSYRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSYDMTVCVWD 266
>Medtr4g105700.1 | transducin/WD40 repeat protein | HC |
chr4:43886721-43877728 | 20130731
Length = 908
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 79 SKSRGLVAGGLFDGEIHLWSENQSATVL---VRHKGPVRGLEFHTTEPNLLASGAEDGQI 135
S R L+ G D + LW E++S + + + H G V + F + + SG+ D +
Sbjct: 414 SSGRNLIVTGSKDNTVRLW-ESESTSCIGVGIGHMGAVGAIAFSKRKRDFFVSGSNDHTL 472
Query: 136 CIW-------DLANALEPKD----SASQGEISFLSWNSQVQHILASTSYDGTMVVWDTKN 184
+W D+A + K +A +I+ ++ ++ S S D T VW +
Sbjct: 473 KVWSIDGLLDDVAAPINLKAKAVVAAHDKDINSVAIAPN-DSLVCSGSQDRTACVWRLPD 531
Query: 185 LKQVISFADSVRRRCSILQWNPDIPTQLIIASEDDSPLRLWDLRFTMAPIMEFVGHTRGV 244
L V+ F R S+ +++P Q ++ + D +R+W + + + F GHT V
Sbjct: 532 LVSVVVFKGHKRGIWSV-EFSP--VDQCVVTASGDKTIRIWAIS-DGSCLKTFEGHTSSV 587
Query: 245 IGMTWCPNDGASLLTCGKDSRTICWNTISGE 275
+ + G +++CG D W S E
Sbjct: 588 LRALFVTR-GTQIVSCGADGLVKLWTVKSNE 617