Miyakogusa Predicted Gene

Lj0g3v0038839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0038839.1 Non Characterized Hit- tr|C0PEC8|C0PEC8_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,27.37,5e-18,seg,NULL,
NODE_43026_length_1996_cov_110.660324.path1.1
         (614 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g073280.1 | hypothetical protein | HC | chr3:33032551-3303...   758   0.0  
Medtr5g060420.1 | hypothetical protein | HC | chr5:25018270-2502...   707   0.0  
Medtr2g461250.1 | hypothetical protein | HC | chr2:25288039-2528...    84   4e-16

>Medtr3g073280.1 | hypothetical protein | HC |
           chr3:33032551-33038006 | 20130731
          Length = 618

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/622 (67%), Positives = 464/622 (74%), Gaps = 14/622 (2%)

Query: 1   MEKSEPALVPQWLRXXXXXXXXXXXXHHFATPSTHTDAPYVARQTRNRSSKTSNDYDSPR 60
           MEKSEPALVPQWLR               A+ S HTD+  VA  TRNRSSKT+ D+DSPR
Sbjct: 1   MEKSEPALVPQWLRSAGSVASSSPHF---ASSSNHTDSHSVANHTRNRSSKTAGDFDSPR 57

Query: 61  SVFLEXXXXXXXXXXXXNGSAKHAYXX----XXXXXXXXXXXXXXXXXNYVDHWDRDCSE 116
           SVFLE            NGSAKHAY                       +++DHWDR+CSE
Sbjct: 58  SVFLERTFSSNSRRSAINGSAKHAYSSFNRNHRDKDRDRDRDRDKDRSHFLDHWDRNCSE 117

Query: 117 PFADLFSGRIERDTLRRSHSMVSRRQNEILTPRVAVDTKSXXXXXXXXXXDLHSRGSIGS 176
           P ADLF+GR ERDTLRRSHS+VSR+Q+E +  R  VDTKS          D+ S GSIGS
Sbjct: 118 PLADLFAGRTERDTLRRSHSLVSRKQSEPVNHRGTVDTKSGSNCNQSNGNDVLSGGSIGS 177

Query: 177 SIQKAVFDKDFPSLGAEERQGITEIGRVTSP--GLGATASQTLPVSSSALIGGEGWTSAL 234
           S  KAVFDKDFPSLG +ER G  EIGRV SP  GLG TASQ+LPV SS+LIGGEGWTSAL
Sbjct: 178 SFHKAVFDKDFPSLGGDERPGSAEIGRVASPVLGLGGTASQSLPVGSSSLIGGEGWTSAL 237

Query: 235 AEVPPIIGNNTTGSLNLQQTXXXXXXXXXXXXXXXXNMAEALVQTPSRARSTPEVSVQTQ 294
           AEVP +IG+++TGS   QQT                NMAEALVQ PSR++S P+ SV+TQ
Sbjct: 238 AEVPSMIGSSSTGSPTAQQTVTPTSGSVLSSTSVGLNMAEALVQAPSRSQSIPQASVKTQ 297

Query: 295 RLEEMAIKQSRQLIPVTPSMPKALVNNSSEKSKPKATARNAEMNMAAKSVLQQPSALHIA 354
           RLEE+AIKQSRQLIPVTPSMPKALVNNS EKSKPKAT RN+EMNM AKSV QQPSALHI 
Sbjct: 298 RLEELAIKQSRQLIPVTPSMPKALVNNS-EKSKPKATLRNSEMNMVAKSVPQQPSALHIV 356

Query: 355 NHSVRSGNAKG-DAPKTSGKFTDLKSVVWENGVSPTAKDALSPTNYSNSKPSNHIPVASA 413
           NHSVR+GNAK  DAPKTSGKFTDLKSVVWENGVSPTAKDA +PTNYSNSKP NH+ V SA
Sbjct: 357 NHSVRNGNAKVVDAPKTSGKFTDLKSVVWENGVSPTAKDASTPTNYSNSKPGNHLAVPSA 416

Query: 414 AASAPLRNPNNLKSPTERKPASLDLKLGSSMDKKPSISQVQSRNAFFNLIKKKTLMNSSV 473
            ASAPLRN NN+KS TERKPASLDLKLGS+ DKK   SQV+SR+ FFNLIK+KTL NSSV
Sbjct: 417 VASAPLRNTNNIKSTTERKPASLDLKLGSTADKKQFASQVKSRHDFFNLIKRKTL-NSSV 475

Query: 474 LPESSPAVSSPLMDKPGEVNIEPVAPLANPQDLGNSAEVTSNGNACLEVHTLPDNE-NDT 532
           LP+SS  VSS   DK GEVN+E V P A+ QDLGNS E+TSNGNA LE H LP+    D+
Sbjct: 476 LPDSSSVVSSATSDKSGEVNMEAVGPPASLQDLGNSTEMTSNGNAHLENHRLPNIRLKDS 535

Query: 533 IPDEEEAAFLRSLGWEEDSG-EDGGLTEEEINAFYQECMKLGTTTLKLCQGMQPKLSTFF 591
            PDEEE AFLRSLGWEEDSG ED GLTEEEIN FYQEC+K+GTTTLKLC GMQPKLS FF
Sbjct: 536 TPDEEEVAFLRSLGWEEDSGDEDEGLTEEEINTFYQECLKMGTTTLKLCPGMQPKLSKFF 595

Query: 592 ESYATNLHGAPAETSSSDSRSE 613
           ESYATNL+GA A +S+SDS SE
Sbjct: 596 ESYATNLNGASAGSSTSDSGSE 617


>Medtr5g060420.1 | hypothetical protein | HC |
           chr5:25018270-25024844 | 20130731
          Length = 627

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/627 (62%), Positives = 451/627 (71%), Gaps = 13/627 (2%)

Query: 1   MEKSEPALVPQWLRXXXXXXXXXXXXHHFATPSTHTDAPY--VARQTRNRSSKTSNDYDS 58
           M++SEP+LVP+WLR             HFA+ S+H D+     A   RNRSSK + D+DS
Sbjct: 1   MDRSEPSLVPEWLRSAGSVVGAGNSAQHFASSSSHADSHSPSAANNNRNRSSKNTGDFDS 60

Query: 59  PRSVFLEXXXXXXXXXXXXNGSAKHAYXXXXXXXXXXXXXXXXXXXNYVDHWDRDCSEPF 118
            RSVFL+            NGSAKHAY                   N+ DHWDRD S+P 
Sbjct: 61  SRSVFLDRTSSASSRRGSINGSAKHAYSSFNRNHRDKDRDREKDRSNFGDHWDRDGSDPL 120

Query: 119 ADLFSGRIERDTLRRSHSMVSRRQNEILTPRVAVDTKSXXXXXXXXXXDLHSRGSIGSSI 178
            +LFSGRIERDTLRRSHSMVSR+Q E L  RVA DTKS             S GS+GSSI
Sbjct: 121 VNLFSGRIERDTLRRSHSMVSRKQGETLPRRVAADTKSGGSSNHNNGNGALSVGSVGSSI 180

Query: 179 QKAVFDKDFPSLGAEERQGITEIGRVTSPGLGATASQTLPVSSSALIGGEGWTSALAEVP 238
           QKAVFDKDFPSLGA+E+QGI EIGRV+SPGLGATASQ+LPV SSALIGGEGWTSALAEVP
Sbjct: 181 QKAVFDKDFPSLGADEKQGIAEIGRVSSPGLGATASQSLPVGSSALIGGEGWTSALAEVP 240

Query: 239 PIIGNNTTGSLNLQQTXXXXXXXXXXXXXXXXNMAEALVQTPSRARSTPEVSVQTQRLEE 298
            +IG+++ GS + QQT                NMAEAL Q PSRARSTP+VSV+TQRLEE
Sbjct: 241 SVIGSSSAGSSSAQQTIAATSVSVSSSTAAGLNMAEALAQAPSRARSTPQVSVKTQRLEE 300

Query: 299 MAIKQSRQLIPVTPSMPKALVNNSSEKSKPKATARNAEMNMAAKSVLQQPSALHIANHSV 358
           +AIKQSRQLIPVTPSMPKAL  NSSEKSKPK   RNAEMN+A KS LQQPSALHIA+ SV
Sbjct: 301 LAIKQSRQLIPVTPSMPKALALNSSEKSKPKTAVRNAEMNVATKSALQQPSALHIASQSV 360

Query: 359 RSGNAKGDAPKTSGKFTDLKSVVWENGVSPTAKDALSPTNYSNSKPSNHIPVASAAASAP 418
           R  NAK D PKTSGKFTDLKSVVWENG SPT+KD  +PTNY+NSK +N   VASAAA  P
Sbjct: 361 RIVNAKVDVPKTSGKFTDLKSVVWENGASPTSKDVSNPTNYANSKSANQHCVASAAAPTP 420

Query: 419 LRNPNNLKSPTERKPASLDLKLGSSMDKKPSISQVQSRNAFFNLIKKKTLMNSS-VLPES 477
           +RNP+NL SP ERKPASLDLKLGS++DKK SISQV+SRN FFNL+K KT  NSS V P+S
Sbjct: 421 VRNPSNLNSPRERKPASLDLKLGSALDKKQSISQVKSRNDFFNLLKNKTATNSSTVFPDS 480

Query: 478 SPAVSSPLMDKPGEVNIEPVAPLANPQDLGNSAEVTSNGNACLEVHTL-----PDNENDT 532
              VSSP ++K GEVN E V P A+PQ +GN+AE TSNGNA    H +      D+E ++
Sbjct: 481 GQMVSSPTLEKSGEVNRESVMPSASPQSVGNAAEPTSNGNAHAHAHEVLSRISDDDEKNS 540

Query: 533 ----IPDEEEAAFLRSLGWEEDSGEDGGLTEEEINAFYQECMKLGTTTLKLC-QGMQPKL 587
                PDEEEAAFLRSLGWEE+S ED GLTEEEINAFYQEC KL  + LKLC +GMQP+L
Sbjct: 541 RATVYPDEEEAAFLRSLGWEENSDEDEGLTEEEINAFYQECKKLDPSALKLCIEGMQPQL 600

Query: 588 STFFESYATNLHGAPAETSSSDSRSEA 614
           S  F+S A+NL GA AE +SS+ RSEA
Sbjct: 601 SKLFDSCASNLRGASAELNSSEPRSEA 627


>Medtr2g461250.1 | hypothetical protein | HC |
           chr2:25288039-25283348 | 20130731
          Length = 121

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/48 (81%), Positives = 45/48 (93%)

Query: 271 NMAEALVQTPSRARSTPEVSVQTQRLEEMAIKQSRQLIPVTPSMPKAL 318
           NMAEALV  PSR++S P+VSV+TQRLEE+AIKQSRQLIPVTPS+PKAL
Sbjct: 57  NMAEALVHAPSRSQSIPQVSVKTQRLEELAIKQSRQLIPVTPSIPKAL 104