Miyakogusa Predicted Gene

Lj0g3v0038749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0038749.1 Non Characterized Hit- tr|B9TAK8|B9TAK8_RICCO
Putative uncharacterized protein OS=Ricinus communis G,76.27,3e-18,
,CUFF.1741.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g091060.1 | transmembrane protein, putative | HC | chr7:35...   115   1e-26

>Medtr7g091060.1 | transmembrane protein, putative | HC |
          chr7:35919905-35921964 | 20130731
          Length = 68

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/67 (80%), Positives = 60/67 (89%)

Query: 1  MAGVLGFARLPPKAKNFVVAGGLTAFVFGTYFYTMRAVGGTDELQVAIDKFEADKSKQEG 60
          MAGVLG++ L PK KNF+VAGGLT FVFG YFYTMRAVGGTDELQVAIDKFEADKS +EG
Sbjct: 1  MAGVLGYSGLAPKTKNFIVAGGLTTFVFGAYFYTMRAVGGTDELQVAIDKFEADKSTKEG 60

Query: 61 DPSVPSK 67
          + S+PSK
Sbjct: 61 ESSIPSK 67