Miyakogusa Predicted Gene
- Lj0g3v0038179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0038179.1 Non Characterized Hit- tr|I3S9T5|I3S9T5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.7,0,ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,NULL; FAMILY NOT
NAMED,NULL; no description,Zinc,CUFF.1716.1
(248 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g463720.1 | RING/U-box protein | HC | chr3:25539281-255423... 393 e-109
Medtr3g463720.2 | RING/U-box protein | HC | chr3:25539157-255424... 352 2e-97
Medtr4g088950.1 | RING zinc finger protein | HC | chr4:35544084-... 286 2e-77
Medtr2g013080.1 | RING zinc finger protein | HC | chr2:3460192-3... 286 2e-77
Medtr4g015600.1 | zinc finger, C3HC4 type (RING finger) protein ... 280 9e-76
Medtr7g068290.1 | zinc finger, C3HC4 type (RING finger) protein ... 263 1e-70
Medtr4g015600.2 | zinc finger, C3HC4 type (RING finger) protein ... 209 2e-54
Medtr4g015600.3 | zinc finger, C3HC4 type (RING finger) protein ... 205 4e-53
Medtr2g013080.2 | RING zinc finger protein | HC | chr2:3460192-3... 200 9e-52
Medtr4g088950.2 | RING zinc finger protein | HC | chr4:35544055-... 195 4e-50
Medtr8g079910.1 | RING finger protein | HC | chr8:34299074-34296... 177 9e-45
Medtr3g086130.1 | ubiquitin-protein ligase | HC | chr3:38974537-... 160 8e-40
Medtr4g015600.5 | zinc finger, C3HC4 type (RING finger) protein ... 159 3e-39
Medtr4g015600.4 | zinc finger, C3HC4 type (RING finger) protein ... 159 3e-39
Medtr4g015600.6 | zinc finger, C3HC4 type (RING finger) protein ... 134 1e-31
Medtr8g079910.2 | RING finger protein | HC | chr8:34299074-34296... 120 9e-28
>Medtr3g463720.1 | RING/U-box protein | HC | chr3:25539281-25542339
| 20130731
Length = 243
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/233 (78%), Positives = 204/233 (87%)
Query: 16 MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNX 75
MGK FQESLKALEADIQYANTLAL HPR+ +GGCFQMRLSYSPVAP+FL LVQW DY
Sbjct: 1 MGKSLFQESLKALEADIQYANTLALGHPRDKEGGCFQMRLSYSPVAPLFLSLVQWTDYRL 60
Query: 76 XXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEV 135
YVTY NG TT+SIYERK+SIRQFYSIIFPALLQLQKG+TDL+ERKQKEV
Sbjct: 61 AGALGLLRILIYVTYGNGKTTISIYERKASIRQFYSIIFPALLQLQKGVTDLEERKQKEV 120
Query: 136 YSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQS 195
Y+ RYQ+KT+ ++RR+S+IDIERE+ECGVC EVKAKVVLPNCCH MC KCY +WC+RSQS
Sbjct: 121 YANRYQKKTDFKDRRESKIDIEREKECGVCLEVKAKVVLPNCCHQMCFKCYREWCLRSQS 180
Query: 196 CPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPDP 248
CPFCRDSLKRVNSGDLWIYTD S+IVD+GT+FKENCK+LFLYIE LPLIIPDP
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKILFLYIEKLPLIIPDP 233
>Medtr3g463720.2 | RING/U-box protein | HC | chr3:25539157-25542475
| 20130731
Length = 242
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 162/210 (77%), Positives = 183/210 (87%)
Query: 39 ALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXXXXXXXXXYVTYANGNTTMS 98
AL HPR+ +GGCFQMRLSYSPVAP+FL LVQW DY YVTY NG TT+S
Sbjct: 23 ALGHPRDKEGGCFQMRLSYSPVAPLFLSLVQWTDYRLAGALGLLRILIYVTYGNGKTTIS 82
Query: 99 IYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTRYQRKTECRERRQSEIDIER 158
IYERK+SIRQFYSIIFPALLQLQKG+TDL+ERKQKEVY+ RYQ+KT+ ++RR+S+IDIER
Sbjct: 83 IYERKASIRQFYSIIFPALLQLQKGVTDLEERKQKEVYANRYQKKTDFKDRRESKIDIER 142
Query: 159 EEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMS 218
E+ECGVC EVKAKVVLPNCCH MC KCY +WC+RSQSCPFCRDSLKRVNSGDLWIYTD S
Sbjct: 143 EKECGVCLEVKAKVVLPNCCHQMCFKCYREWCLRSQSCPFCRDSLKRVNSGDLWIYTDTS 202
Query: 219 EIVDMGTVFKENCKMLFLYIESLPLIIPDP 248
+IVD+GT+FKENCK+LFLYIE LPLIIPDP
Sbjct: 203 DIVDVGTIFKENCKILFLYIEKLPLIIPDP 232
>Medtr4g088950.1 | RING zinc finger protein | HC |
chr4:35544084-35540259 | 20130731
Length = 248
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 175/228 (76%)
Query: 20 SFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXX 79
SF++SLK L+ADIQ+ANTLA D PRE DG C QMR+SYSP A +FL VQW D +
Sbjct: 10 SFKDSLKLLQADIQHANTLASDFPREYDGACLQMRMSYSPAATLFLFFVQWTDCHLAGAL 69
Query: 80 XXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTR 139
Y Y +G TTMS +ERK+SIR+FY++I+P+LLQL+KG+TD +++KQK V R
Sbjct: 70 GLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDSEDKKQKAVCMER 129
Query: 140 YQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPFC 199
Y+R+ + R+ S+IDIER++ECG+C E+ +K+VLPNC H MCLKCY +W RSQSCPFC
Sbjct: 130 YRRRDDDDCRQSSDIDIERDDECGICMEMNSKIVLPNCNHVMCLKCYREWRTRSQSCPFC 189
Query: 200 RDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
RDSLKRVNSGDLW+YTD ++VDM TV +EN + LF+YI+ LPLI+PD
Sbjct: 190 RDSLKRVNSGDLWVYTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPD 237
>Medtr2g013080.1 | RING zinc finger protein | HC |
chr2:3460192-3454987 | 20130731
Length = 251
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/227 (60%), Positives = 173/227 (76%)
Query: 21 FQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXXX 80
F+ESLK LEADI +ANTLA D PRE DG C QMR+SYSP A +FL LVQW D N
Sbjct: 14 FKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALG 73
Query: 81 XXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTRY 140
Y Y +G TTMS +ERK+SIR+FY++I+P+LLQL+KG+TD +++KQK V RY
Sbjct: 74 LLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDAEDKKQKVVCMERY 133
Query: 141 QRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPFCR 200
+R+ + ++ S+ID EREEECG+C E+ +K+VLPNC H MCLKCY +W RSQSCPFCR
Sbjct: 134 RRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMCLKCYHEWRARSQSCPFCR 193
Query: 201 DSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
DSLKRVNSGDLWI+TD +IVDM TV +EN + LF+YI+ LPLIIP+
Sbjct: 194 DSLKRVNSGDLWIFTDSRDIVDMETVTRENLRRLFMYIDKLPLIIPE 240
>Medtr4g015600.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 249
Score = 280 bits (716), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 173/233 (74%)
Query: 14 LGMGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADY 73
+G + SF++SLKALEADIQ+ANTLA D+P E DG FQMRLSYSP A L + +W D
Sbjct: 3 MGEMRKSFKDSLKALEADIQFANTLASDYPSETDGARFQMRLSYSPAAQFLLFMFKWTDC 62
Query: 74 NXXXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQK 133
+ Y T+ +G TTMS+YERK+S+++FY +IFP+LLQLQ+G+TD++ERKQK
Sbjct: 63 HLAGALGLLRVLVYKTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQK 122
Query: 134 EVYSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRS 193
++ +T+Y+ K + + SEID+EREEEC +C E+ KVVLPNC H +C++CY+DW RS
Sbjct: 123 DLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDWHTRS 182
Query: 194 QSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIP 246
QSCPFCRDSLKRVNS DLWIY SEI D+ ++ KEN K LF+ I+ LPLI P
Sbjct: 183 QSCPFCRDSLKRVNSSDLWIYMSNSEIQDLESINKENLKRLFMRIDKLPLISP 235
>Medtr7g068290.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:24968493-24965480 | 20130731
Length = 245
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 166/226 (73%), Gaps = 1/226 (0%)
Query: 20 SFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXX 79
SF++SLKALEADIQ+ANTLA D P + DG QMRLSYSP A FL LVQW D +
Sbjct: 4 SFKDSLKALEADIQFANTLASDCPSDQDGAYLQMRLSYSPAAHFFLFLVQWTDCHLAGAL 63
Query: 80 XXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTR 139
Y Y +G TTMSI+ERK+S+++FY ++FP+LLQL +G+TD+++RKQK + +T+
Sbjct: 64 GLLKIFIYKAYKDGKTTMSIHERKASLKEFYGVVFPSLLQLHRGITDVEDRKQKLLCATK 123
Query: 140 YQRKTECRERRQSEIDI-EREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPF 198
Y+ K + + SEID+ + EEEC +C E+ + VVLPNC H MC+KCY DW RS+SCPF
Sbjct: 124 YKPKELVDKGKSSEIDVEKEEEECDICMEITSIVVLPNCNHSMCIKCYRDWHARSESCPF 183
Query: 199 CRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLI 244
CRDSLKRVNSGDLW+Y SEI D+ ++ KEN K LF+YIE LPL+
Sbjct: 184 CRDSLKRVNSGDLWMYMSSSEIDDLASINKENLKRLFMYIEKLPLV 229
>Medtr4g015600.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 196
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 127/158 (80%)
Query: 89 TYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTRYQRKTECRE 148
T+ +G TTMS+YERK+S+++FY +IFP+LLQLQ+G+TD++ERKQK++ +T+Y+ K +
Sbjct: 25 TFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQKDLCATKYKPKDVIGK 84
Query: 149 RRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDWCMRSQSCPFCRDSLKRVNS 208
+ SEID+EREEEC +C E+ KVVLPNC H +C++CY+DW RSQSCPFCRDSLKRVNS
Sbjct: 85 GKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDWHTRSQSCPFCRDSLKRVNS 144
Query: 209 GDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIP 246
DLWIY SEI D+ ++ KEN K LF+ I+ LPLI P
Sbjct: 145 SDLWIYMSNSEIQDLESINKENLKRLFMRIDKLPLISP 182
>Medtr4g015600.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682819 | 20130731
Length = 178
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 130/176 (73%)
Query: 14 LGMGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADY 73
+G + SF++SLKALEADIQ+ANTLA D+P E DG FQMRLSYSP A L + +W D
Sbjct: 3 MGEMRKSFKDSLKALEADIQFANTLASDYPSETDGARFQMRLSYSPAAQFLLFMFKWTDC 62
Query: 74 NXXXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQK 133
+ Y T+ +G TTMS+YERK+S+++FY +IFP+LLQLQ+G+TD++ERKQK
Sbjct: 63 HLAGALGLLRVLVYKTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQK 122
Query: 134 EVYSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDW 189
++ +T+Y+ K + + SEID+EREEEC +C E+ KVVLPNC H +C++CY+DW
Sbjct: 123 DLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDW 178
>Medtr2g013080.2 | RING zinc finger protein | HC |
chr2:3460192-3457961 | 20130731
Length = 246
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 124/169 (73%)
Query: 21 FQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXXX 80
F+ESLK LEADI +ANTLA D PRE DG C QMR+SYSP A +FL LVQW D N
Sbjct: 14 FKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALG 73
Query: 81 XXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTRY 140
Y Y +G TTMS +ERK+SIR+FY++I+P+LLQL+KG+TD +++KQK V RY
Sbjct: 74 LLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDAEDKKQKVVCMERY 133
Query: 141 QRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDW 189
+R+ + ++ S+ID EREEECG+C E+ +K+VLPNC H MCLKCY +W
Sbjct: 134 RRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMCLKCYHEW 182
>Medtr4g088950.2 | RING zinc finger protein | HC |
chr4:35544055-35540259 | 20130731
Length = 193
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 126/170 (74%)
Query: 20 SFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNXXXXX 79
SF++SLK L+ADIQ+ANTLA D PRE DG C QMR+SYSP A +FL VQW D +
Sbjct: 10 SFKDSLKLLQADIQHANTLASDFPREYDGACLQMRMSYSPAATLFLFFVQWTDCHLAGAL 69
Query: 80 XXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTR 139
Y Y +G TTMS +ERK+SIR+FY++I+P+LLQL+KG+TD +++KQK V R
Sbjct: 70 GLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDSEDKKQKAVCMER 129
Query: 140 YQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDW 189
Y+R+ + R+ S+IDIER++ECG+C E+ +K+VLPNC H MCLKCY +W
Sbjct: 130 YRRRDDDDCRQSSDIDIERDDECGICMEMNSKIVLPNCNHVMCLKCYREW 179
>Medtr8g079910.1 | RING finger protein | HC | chr8:34299074-34296406
| 20130731
Length = 254
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 142/239 (59%), Gaps = 7/239 (2%)
Query: 16 MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYN- 74
+ + + +SLK LEADI +AN LA PR G FQM+L YS +AP+FL L+QW D +
Sbjct: 5 LSRLPYHDSLKLLEADIHHANALAAAIPRGKGGSVFQMKLVYSQLAPLFLLLLQWMDCSC 64
Query: 75 ---XXXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLD--E 129
Y + +G +++ + RK++I+ FY++I P+L +L L L+
Sbjct: 65 SCFLHRYLNFFHIIIYKVHNDGRPSITSHGRKATIQDFYAVILPSLQRLHGSLEKLEICM 124
Query: 130 RKQKEVYSTRYQRK-TECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSD 188
+ + Y +K E + + +D+ERE+ECG+C E K+VLPNCCH MC+KCY
Sbjct: 125 KGHTSLDGPSYGKKMIEANGKLTTNVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRK 184
Query: 189 WCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPLIIPD 247
W +S+SCPFCR S++RVNS DLW+ T ++VD TV KE+ +LYI SLP PD
Sbjct: 185 WNTKSESCPFCRGSIRRVNSEDLWVLTCDDDVVDAETVSKEDLLRFYLYINSLPKDYPD 243
>Medtr3g086130.1 | ubiquitin-protein ligase | HC |
chr3:38974537-38976872 | 20130731
Length = 259
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 137/244 (56%), Gaps = 15/244 (6%)
Query: 16 MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYNX 75
+ + +Q+SL+ LEADIQ AN+LA PR G +M+L + +AP+ L +QW D +
Sbjct: 8 LSRLPYQDSLQILEADIQQANSLAAAIPRARGGTLIKMKLVCNQLAPLLLLFLQWMDCSC 67
Query: 76 XXXXXXXXXXXYVTY----ANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERK 131
++ +G + MS RK++I+ FY++I P+L +L D E
Sbjct: 68 AAFLHSYLNLFHILIYKEPNDGRSNMSTRGRKATIKDFYAVILPSLQRLHGSFDDTMETC 127
Query: 132 QKEVYSTRYQRKTECRER--------RQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCL 183
++ S + C + + + +D++RE+ECG+C E K+VLPNCCH MC+
Sbjct: 128 EEGNTSLE---GSSCGNKVIEFEGDGKLTNVDLQREDECGICLEPCTKMVLPNCCHAMCI 184
Query: 184 KCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESLPL 243
KCY W +S+SCPFCR SL+RVNS DLW+ T ++VD TV KE+ +LYI LP
Sbjct: 185 KCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCDEDVVDAETVSKEDLLRFYLYINKLPK 244
Query: 244 IIPD 247
PD
Sbjct: 245 DNPD 248
>Medtr4g015600.5 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 140
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%)
Query: 122 KGLTDLDERKQKEVYSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYM 181
+G+TD++ERKQK++ +T+Y+ K + + SEID+EREEEC +C E+ KVVLPNC H +
Sbjct: 2 RGITDVEERKQKDLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSL 61
Query: 182 CLKCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESL 241
C++CY+DW RSQSCPFCRDSLKRVNS DLWIY SEI D+ ++ KEN K LF+ I+ L
Sbjct: 62 CMRCYNDWHTRSQSCPFCRDSLKRVNSSDLWIYMSNSEIQDLESINKENLKRLFMRIDKL 121
Query: 242 PLIIP 246
PLI P
Sbjct: 122 PLISP 126
>Medtr4g015600.4 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 140
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 97/125 (77%)
Query: 122 KGLTDLDERKQKEVYSTRYQRKTECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYM 181
+G+TD++ERKQK++ +T+Y+ K + + SEID+EREEEC +C E+ KVVLPNC H +
Sbjct: 2 RGITDVEERKQKDLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSL 61
Query: 182 CLKCYSDWCMRSQSCPFCRDSLKRVNSGDLWIYTDMSEIVDMGTVFKENCKMLFLYIESL 241
C++CY+DW RSQSCPFCRDSLKRVNS DLWIY SEI D+ ++ KEN K LF+ I+ L
Sbjct: 62 CMRCYNDWHTRSQSCPFCRDSLKRVNSSDLWIYMSNSEIQDLESINKENLKRLFMRIDKL 121
Query: 242 PLIIP 246
PLI P
Sbjct: 122 PLISP 126
>Medtr4g015600.6 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682819 | 20130731
Length = 125
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 84/101 (83%)
Query: 89 TYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLDERKQKEVYSTRYQRKTECRE 148
T+ +G TTMS+YERK+S+++FY +IFP+LLQLQ+G+TD++ERKQK++ +T+Y+ K +
Sbjct: 25 TFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQKDLCATKYKPKDVIGK 84
Query: 149 RRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSDW 189
+ SEID+EREEEC +C E+ KVVLPNC H +C++CY+DW
Sbjct: 85 GKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDW 125
>Medtr8g079910.2 | RING finger protein | HC | chr8:34299074-34296406
| 20130731
Length = 197
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 103/181 (56%), Gaps = 7/181 (3%)
Query: 16 MGKCSFQESLKALEADIQYANTLALDHPRENDGGCFQMRLSYSPVAPIFLPLVQWADYN- 74
+ + + +SLK LEADI +AN LA PR G FQM+L YS +AP+FL L+QW D +
Sbjct: 5 LSRLPYHDSLKLLEADIHHANALAAAIPRGKGGSVFQMKLVYSQLAPLFLLLLQWMDCSC 64
Query: 75 ---XXXXXXXXXXXXYVTYANGNTTMSIYERKSSIRQFYSIIFPALLQLQKGLTDLD--E 129
Y + +G +++ + RK++I+ FY++I P+L +L L L+
Sbjct: 65 SCFLHRYLNFFHIIIYKVHNDGRPSITSHGRKATIQDFYAVILPSLQRLHGSLEKLEICM 124
Query: 130 RKQKEVYSTRYQRK-TECRERRQSEIDIEREEECGVCFEVKAKVVLPNCCHYMCLKCYSD 188
+ + Y +K E + + +D+ERE+ECG+C E K+VLPNCCH MC+KCY
Sbjct: 125 KGHTSLDGPSYGKKMIEANGKLTTNVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRK 184
Query: 189 W 189
W
Sbjct: 185 W 185