Miyakogusa Predicted Gene

Lj0g3v0036869.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036869.1 Non Characterized Hit- tr|D5A8Z1|D5A8Z1_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,56.52,2e-19,seg,NULL; EamA,Drug/metabolite
transporter,NODE_89017_length_778_cov_12.149100.path1.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g085700.1 | nodulin MtN21/EamA-like transporter family pro...   157   2e-39

>Medtr8g085700.1 | nodulin MtN21/EamA-like transporter family
           protein | HC | chr8:35527762-35525750 | 20130731
          Length = 120

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 89/124 (71%), Gaps = 4/124 (3%)

Query: 1   MEEGASSSSSTPNPKGYAWAVSAGFNAALAAISVKLPLHQFVRYGLVLLFNVTMWGCYVN 60
           ME G SS+      KGYAWAVSAG NAALAAI  K   H  ++YG V+ FNVTMW CYVN
Sbjct: 1   MEGGGSSN----GRKGYAWAVSAGLNAALAAIFAKFTFHILIKYGFVVFFNVTMWCCYVN 56

Query: 61  SLKALSSLQATVTNFATNFISSGLAGFFFFREPLSFQWFXXXXXXXXXXXXXSNSSIKKK 120
           SLKALSSLQATVTNFATNFISSGLAGFFFF E LSFQWF             SNSSI+KK
Sbjct: 57  SLKALSSLQATVTNFATNFISSGLAGFFFFHEHLSFQWFAGASLIIVGVIILSNSSIEKK 116

Query: 121 VNTD 124
           V+ D
Sbjct: 117 VSAD 120