Miyakogusa Predicted Gene

Lj0g3v0036659.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036659.1 Non Characterized Hit- tr|D7KQA7|D7KQA7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,62.5,9e-19,SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN,SSXT;
coiled-coil,NULL; SSXT,SSXT;
seg,NULL,NODE_47957_length_1049_cov_14.057198.path1.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080590.1 | GRF1-interacting factor-like protein | HC | ch...   113   1e-25
Medtr7g115410.1 | SSXT protein (amine-terminal region) protein |...    92   5e-19
Medtr8g024650.3 | GRF1-interacting factor-like protein | HC | ch...    84   1e-16
Medtr8g024650.1 | GRF1-interacting factor-like protein | HC | ch...    84   1e-16
Medtr8g024650.2 | GRF1-interacting factor-like protein | HC | ch...    84   1e-16
Medtr3g092260.1 | SSXT protein (amine-terminal region) protein |...    56   2e-08

>Medtr1g080590.1 | GRF1-interacting factor-like protein | HC |
          chr1:35838257-35836013 | 20130731
          Length = 211

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 62/77 (80%), Gaps = 1/77 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQN+GKL+ECAENQSRLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNTGKLTECAENQSRLQRNLMYLAAIADS 71

Query: 73 XXXXXXXXXXXXXSGIV 89
                       SG++
Sbjct: 72 QPQPPTMPGQYPSSGMM 88


>Medtr7g115410.1 | SSXT protein (amine-terminal region) protein |
          HC | chr7:47687065-47688259 | 20130731
          Length = 218

 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/46 (95%), Positives = 46/46 (100%)

Query: 27 QQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          +QYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 16 KQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 61


>Medtr8g024650.3 | GRF1-interacting factor-like protein | HC |
          chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 50/60 (83%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
           S+    N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 12 PSFPQQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 71


>Medtr8g024650.1 | GRF1-interacting factor-like protein | HC |
          chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 50/60 (83%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
           S+    N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 12 PSFPQQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 71


>Medtr8g024650.2 | GRF1-interacting factor-like protein | HC |
          chr8:9109643-9113372 | 20130731
          Length = 213

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 50/60 (83%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
           S+    N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+
Sbjct: 12 PSFPQQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADA 71


>Medtr3g092260.1 | SSXT protein (amine-terminal region) protein |
          HC | chr3:42152282-42149249 | 20130731
          Length = 189

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 21 VTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIAD 71
          +T++ IQ+ L+EN+ LI+KI+E Q  GK SE    Q++LQ NL +LA +AD
Sbjct: 11 LTTEQIQKCLEENEELIMKILEGQKQGKHSELGPYQAKLQHNLTFLAKLAD 61