Miyakogusa Predicted Gene

Lj0g3v0036439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0036439.1 tr|Q8W197|Q8W197_VIGUN Aminoimidazole
ribonucleotide carboxylase OS=Vigna unguiculata PE=2
SV=1,83.55,0,ATP_GRASP,ATP-grasp fold; ATP-grasp,ATP-grasp fold,
ATP-dependent carboxylate-amine ligase-type; no ,gene.g2566.t1.1
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080500.1 | phosphoribosylaminoimidazole carboxylase | HC ...   345   3e-95

>Medtr1g080500.1 | phosphoribosylaminoimidazole carboxylase | HC |
           chr1:35857963-35851754 | 20130731
          Length = 641

 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 184/230 (80%), Positives = 196/230 (85%), Gaps = 8/230 (3%)

Query: 1   MEQPPPLSSSLKLKQCRHPHLTIQASNQHGAVSSSNDEVPVHGLSETIVGVLGGGQLGRM 60
           MEQP  LS   KLK    PH        + AVS  N+E  VHGLSET+VGVLGGGQLGRM
Sbjct: 48  MEQPNLLS--FKLKHSHQPH------QANAAVSPRNEESVVHGLSETVVGVLGGGQLGRM 99

Query: 61  LCQAASKMAIKVMVLDPQENCPASSLSYHHMVGSFDDSATVEEFAKRCGVLTVEIEHVDV 120
           LCQAAS+MAIKV+VLDPQ+NCPASS S+HHMVGSFDDSATV+EFAKRC VLT EIEHVDV
Sbjct: 100 LCQAASQMAIKVVVLDPQDNCPASSFSHHHMVGSFDDSATVQEFAKRCDVLTFEIEHVDV 159

Query: 121 DTLEKLEKQGVDCHPKASTIRIIQDKYQQKVHFSQHGIPLPEFRQIDDLESAKKVGELFG 180
            TLEKLEKQGVDC PKASTIRIIQDKYQQKVHFSQH IPLPEF ++DDLE AKKVG+ FG
Sbjct: 160 TTLEKLEKQGVDCQPKASTIRIIQDKYQQKVHFSQHDIPLPEFMRLDDLEGAKKVGKRFG 219

Query: 181 YPLMLKSRRLAYDGRGNAVAKSEEELPSAVDALGGFSRGLYAEKWAPFVK 230
           YPLM+KSRRLAYDGRGNAVAK EEEL SAVDALGGF RGLYAEKWAPFVK
Sbjct: 220 YPLMIKSRRLAYDGRGNAVAKREEELTSAVDALGGFDRGLYAEKWAPFVK 269