Miyakogusa Predicted Gene

Lj0g3v0033019.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0033019.2 Non Characterized Hit- tr|I1MNT9|I1MNT9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.08,0,no
description,Armadillo-like helical; SUBFAMILY NOT NAMED,NULL;
GEMIN2,Survival motor neuron intera,CUFF.1455.2
         (598 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g032885.1 | ARM repeat protein | HC | chr6:10224831-102213...   868   0.0  
Medtr0495s0010.1 | armadillo/beta-catenin-like repeat protein | ...   155   7e-38

>Medtr6g032885.1 | ARM repeat protein | HC | chr6:10224831-10221378
           | 20130731
          Length = 601

 Score =  868 bits (2242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/608 (71%), Positives = 502/608 (82%), Gaps = 17/608 (2%)

Query: 1   MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
           MGR+L+PVL+RELENLDKDADSRKSAMRALKSYVKDLD++ IP+FLAQVSETKETGT+SG
Sbjct: 1   MGRNLSPVLRRELENLDKDADSRKSAMRALKSYVKDLDFRAIPMFLAQVSETKETGTVSG 60

Query: 61  EFTISLYEVLARVHGVKIVPLIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDP 120
           EFTISLYEVLARVHGVKIVP+I+SIMQSI+QTLASSAGSFPLQQACS+VVPAVARYGIDP
Sbjct: 61  EFTISLYEVLARVHGVKIVPMIESIMQSIIQTLASSAGSFPLQQACSRVVPAVARYGIDP 120

Query: 121 TTADEKKRSIIHSICKPXXXXXXXXXXXXXCGAALCLKALVDSDNWRYASDEIVNRVCQN 180
           T  ++KK+ IIHSICKP             CGAALCLKALVDSDNWR+ASDE+VNRVCQN
Sbjct: 121 TMPEDKKKHIIHSICKPLSDSLTSSLDSLSCGAALCLKALVDSDNWRFASDEMVNRVCQN 180

Query: 181 VAVALEEKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLQILHAGGELLEGNSQKRF 240
           VAVALE KSTQTN HMGLVM+LAK N+LIVEAYARLLIQSGL++L+  GE ++GNSQKRF
Sbjct: 181 VAVALEGKSTQTNLHMGLVMSLAKHNSLIVEAYARLLIQSGLRMLNVSGESMDGNSQKRF 240

Query: 241 AAIQMVNFLMKCLDPRSIFSEAEQIIEVMELCQSDKMAYVKGAAFEALQSAKRIAIDKKT 300
           AAIQMVN+LMKCLDPRSIFSE EQ+IE ME CQSDKMA++KGAA EALQ+AK++A DKK 
Sbjct: 241 AAIQMVNYLMKCLDPRSIFSEVEQVIEEMEQCQSDKMAFIKGAALEALQTAKKVANDKKL 300

Query: 301 KCLKSPAAVTGSNFSRRDYTEGGSFYGDGDHSPTSMSPESRTFDFFPGYESLVESPFSTS 360
           + +KSPA+VTGSNFSRRD+ +G S  GDGD +PTS SPESRT ++FPGY SL ESP ST 
Sbjct: 301 RGMKSPASVTGSNFSRRDFMDGDSSSGDGDRTPTSDSPESRTLEYFPGYGSLAESPISTC 360

Query: 361 DPSQNFNYARRSVNRKLWSHENGGVDV--KDGLFSKAGQGNGLLGHAVDHEFPNGGGDLA 418
               N NY+RRSVNRKLWS ENGGVDV  KDGLFS A + NG+     DH F N GGDL 
Sbjct: 361 QSIHNLNYSRRSVNRKLWSLENGGVDVSLKDGLFSSAEERNGM-----DHTFLN-GGDLT 414

Query: 419 EEFDGFLLRSPRRGVSESTSTSPLRSRSQVNVDTIKIFTTPRKLIHSLQDLNDETSDCSE 478
           EEF  F+ RSPR G+S ST+TSPLRS  +VNVD+I+IF TP++LI SLQD  DE+SDCSE
Sbjct: 415 EEF-AFIPRSPRHGISRSTNTSPLRSHPRVNVDSIQIFDTPKRLIRSLQDPTDESSDCSE 473

Query: 479 NLNKRIRNLSSGNIKWNPACYSKYDKNGIADHVNYDCKENESSCGDVQFQGGPESVSSTD 538
              +R ++LSSGNI W+P+ YSKYD++G+A+H  YD KE  SSCGD Q+QG  ESVSSTD
Sbjct: 474 KPVRRYKSLSSGNIDWSPSAYSKYDQSGLANHDKYDGKEYGSSCGDGQYQGESESVSSTD 533

Query: 539 ELLGDADMQ--------SRNDILTVLMEKPIQKAKRKLVCGLSFVIIAMATPLLWINSQE 590
           EL  DAD Q        SR D   V MEKPIQ  KR+ VCGLSFVI+A+ATPL+W+NSQE
Sbjct: 534 ELPADADNQRLSEEVRESRKDPQIVRMEKPIQTTKRRFVCGLSFVILAVATPLIWLNSQE 593

Query: 591 EGHFLVPT 598
           E HFLVPT
Sbjct: 594 EAHFLVPT 601


>Medtr0495s0010.1 | armadillo/beta-catenin-like repeat protein |
          HC | scaffold0495:260-11 | 20130731
          Length = 83

 Score =  155 bits (393), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 82/83 (98%)

Query: 1  MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
          MGR+L+PVL+RELENLDKDADSRKSAMRALKSYVKDLD++ IP+FLAQVSETKETGT+SG
Sbjct: 1  MGRNLSPVLRRELENLDKDADSRKSAMRALKSYVKDLDFRAIPMFLAQVSETKETGTVSG 60

Query: 61 EFTISLYEVLARVHGVKIVPLID 83
          EFTISLYEVLARVHGVKIVP+I+
Sbjct: 61 EFTISLYEVLARVHGVKIVPMIE 83