Miyakogusa Predicted Gene

Lj0g3v0032719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0032719.1 Non Characterized Hit- tr|J3M3H4|J3M3H4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,40.16,0.000000000000001, ,CUFF.1477.1
         (265 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033235.1 | hypothetical protein | HC | chr6:10522219-1053...   410   e-115
Medtr7g084170.3 | hypothetical protein | HC | chr7:32457372-3246...   342   3e-94
Medtr7g084170.2 | hypothetical protein | HC | chr7:32457371-3246...   342   3e-94
Medtr7g084170.4 | hypothetical protein | HC | chr7:32457371-3246...   342   3e-94
Medtr7g084170.1 | hypothetical protein | HC | chr7:32458921-3246...   341   3e-94
Medtr2g096000.2 | DNA-binding protein, putative | HC | chr2:4096...    70   2e-12
Medtr2g096000.1 | DNA-binding protein, putative | HC | chr2:4097...    70   2e-12

>Medtr6g033235.1 | hypothetical protein | HC |
           chr6:10522219-10530937 | 20130731
          Length = 962

 Score =  410 bits (1053), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/265 (73%), Positives = 228/265 (86%), Gaps = 4/265 (1%)

Query: 1   MAADQRRKRINGASIVGYGSREHHRTKRKNSGQGQNDLNLRSHISVEWDSNQKRVVAKRE 60
           MAADQRRKR+NGASIVGYGS+E H+TKRKN G  QND+  R+HISVEWD+NQKRVVAKRE
Sbjct: 1   MAADQRRKRVNGASIVGYGSKEQHKTKRKNLGLVQNDM--RAHISVEWDNNQKRVVAKRE 58

Query: 61  QIGISRRQMKPFVNFVSNDHKVLADVFTMPQEIFSLDNLSEVLSYEVWKTLLSENERNLL 120
           QIGIS RQMKPFVN V+NDHKVLADV T+P+EIF LDNLSEVLSYEVW T LSENERN L
Sbjct: 59  QIGISWRQMKPFVNHVTNDHKVLADVVTVPEEIFDLDNLSEVLSYEVWNTHLSENERNHL 118

Query: 121 MQFLPSGLEPHHAVEELLSGSNFQFGNPLLKWGASLCLGDLHPDMIVDRELHLKAENRAY 180
           M FLP G+EPH AVE+LL+G++F FG+P+L WGAS+C GDLHPD++V +E HLK++ RAY
Sbjct: 119 MNFLPRGIEPHQAVEDLLAGTDFDFGSPVLNWGASVCSGDLHPDIVVGQEQHLKSQKRAY 178

Query: 181 YSQLYNYHNDMLGFLSKLKERWKSCKDPEKEFFQKIRRSKHDEKKMPSNLNESRIFDRDE 240
           Y QL+NYHNDM+GFLSKLKERW+SC+DPE E  QK+ R KH +K+MPSN+NESR++D D 
Sbjct: 179 YRQLHNYHNDMIGFLSKLKERWQSCRDPENEILQKMWRPKHVQKRMPSNVNESRVYDHDG 238

Query: 241 N--VTSDSCSWDAEEKACSSDNQIS 263
           N  VTS+SCSWD +EKA SSD  IS
Sbjct: 239 NVTVTSESCSWDTDEKAGSSDYLIS 263


>Medtr7g084170.3 | hypothetical protein | HC |
           chr7:32457372-32465667 | 20130731
          Length = 982

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/267 (67%), Positives = 205/267 (76%), Gaps = 5/267 (1%)

Query: 1   MAADQRRKRINGASIVGYGSREHHRTKRKNSGQG-QNDLNLRSHISVEWDSNQKRVVAKR 59
           MAADQRRK++NGAS+V YGS E +RTKRKN G   Q+DLN++SHISVEWD+N +RVVAKR
Sbjct: 3   MAADQRRKQLNGASLVSYGSPEQNRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKR 62

Query: 60  EQIGISRRQMKPFVNFVSNDHKVLADVFTMPQEIFSLDNLSEVLSYEVWKTLLSENERNL 119
           EQIGIS RQ +PF  F  N H+VLADV  MP+EIF LD+LSEVLSYEVW T LS++ERN 
Sbjct: 63  EQIGISWRQTRPFARFDHNGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNF 122

Query: 120 LMQFLPSGLEPHHAVEELLSGSNFQFGNPLLKWGASLCLGDLHPDMIVDRELHLKAENRA 179
           L QFLP  LEP+  V+ELLSG    FGNP LKWGASLC GDLHPDMIV  E HLK++ RA
Sbjct: 123 LKQFLPGDLEPNQVVQELLSGDELHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRA 182

Query: 180 YYSQLYNYHNDMLGFLSKLKERWKSCKDPEKEFFQKIRRSKHDEKKMP-SNLNESRIFDR 238
           Y+SQL  YH DM+GFL KLKERW++CK+ EKE   KI RSK+D KK   SNL+E R  D 
Sbjct: 183 YFSQLRKYHKDMIGFLIKLKERWETCKNSEKEILPKILRSKNDIKKRKRSNLDEFRDDDH 242

Query: 239 DEN--VTSDSCSWDAEEKACSSDNQIS 263
           D N  VTS S SWD EEKA  SD QIS
Sbjct: 243 DGNVTVTSKSYSWDEEEKAY-SDIQIS 268


>Medtr7g084170.2 | hypothetical protein | HC |
           chr7:32457371-32465667 | 20130731
          Length = 982

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/267 (67%), Positives = 205/267 (76%), Gaps = 5/267 (1%)

Query: 1   MAADQRRKRINGASIVGYGSREHHRTKRKNSGQG-QNDLNLRSHISVEWDSNQKRVVAKR 59
           MAADQRRK++NGAS+V YGS E +RTKRKN G   Q+DLN++SHISVEWD+N +RVVAKR
Sbjct: 3   MAADQRRKQLNGASLVSYGSPEQNRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKR 62

Query: 60  EQIGISRRQMKPFVNFVSNDHKVLADVFTMPQEIFSLDNLSEVLSYEVWKTLLSENERNL 119
           EQIGIS RQ +PF  F  N H+VLADV  MP+EIF LD+LSEVLSYEVW T LS++ERN 
Sbjct: 63  EQIGISWRQTRPFARFDHNGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNF 122

Query: 120 LMQFLPSGLEPHHAVEELLSGSNFQFGNPLLKWGASLCLGDLHPDMIVDRELHLKAENRA 179
           L QFLP  LEP+  V+ELLSG    FGNP LKWGASLC GDLHPDMIV  E HLK++ RA
Sbjct: 123 LKQFLPGDLEPNQVVQELLSGDELHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRA 182

Query: 180 YYSQLYNYHNDMLGFLSKLKERWKSCKDPEKEFFQKIRRSKHDEKKMP-SNLNESRIFDR 238
           Y+SQL  YH DM+GFL KLKERW++CK+ EKE   KI RSK+D KK   SNL+E R  D 
Sbjct: 183 YFSQLRKYHKDMIGFLIKLKERWETCKNSEKEILPKILRSKNDIKKRKRSNLDEFRDDDH 242

Query: 239 DEN--VTSDSCSWDAEEKACSSDNQIS 263
           D N  VTS S SWD EEKA  SD QIS
Sbjct: 243 DGNVTVTSKSYSWDEEEKAY-SDIQIS 268


>Medtr7g084170.4 | hypothetical protein | HC |
           chr7:32457371-32465584 | 20130731
          Length = 982

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/267 (67%), Positives = 205/267 (76%), Gaps = 5/267 (1%)

Query: 1   MAADQRRKRINGASIVGYGSREHHRTKRKNSGQG-QNDLNLRSHISVEWDSNQKRVVAKR 59
           MAADQRRK++NGAS+V YGS E +RTKRKN G   Q+DLN++SHISVEWD+N +RVVAKR
Sbjct: 3   MAADQRRKQLNGASLVSYGSPEQNRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKR 62

Query: 60  EQIGISRRQMKPFVNFVSNDHKVLADVFTMPQEIFSLDNLSEVLSYEVWKTLLSENERNL 119
           EQIGIS RQ +PF  F  N H+VLADV  MP+EIF LD+LSEVLSYEVW T LS++ERN 
Sbjct: 63  EQIGISWRQTRPFARFDHNGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNF 122

Query: 120 LMQFLPSGLEPHHAVEELLSGSNFQFGNPLLKWGASLCLGDLHPDMIVDRELHLKAENRA 179
           L QFLP  LEP+  V+ELLSG    FGNP LKWGASLC GDLHPDMIV  E HLK++ RA
Sbjct: 123 LKQFLPGDLEPNQVVQELLSGDELHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRA 182

Query: 180 YYSQLYNYHNDMLGFLSKLKERWKSCKDPEKEFFQKIRRSKHDEKKMP-SNLNESRIFDR 238
           Y+SQL  YH DM+GFL KLKERW++CK+ EKE   KI RSK+D KK   SNL+E R  D 
Sbjct: 183 YFSQLRKYHKDMIGFLIKLKERWETCKNSEKEILPKILRSKNDIKKRKRSNLDEFRDDDH 242

Query: 239 DEN--VTSDSCSWDAEEKACSSDNQIS 263
           D N  VTS S SWD EEKA  SD QIS
Sbjct: 243 DGNVTVTSKSYSWDEEEKAY-SDIQIS 268


>Medtr7g084170.1 | hypothetical protein | HC |
           chr7:32458921-32465350 | 20130731
          Length = 980

 Score =  341 bits (875), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/267 (67%), Positives = 205/267 (76%), Gaps = 5/267 (1%)

Query: 1   MAADQRRKRINGASIVGYGSREHHRTKRKNSGQG-QNDLNLRSHISVEWDSNQKRVVAKR 59
           MAADQRRK++NGAS+V YGS E +RTKRKN G   Q+DLN++SHISVEWD+N +RVVAKR
Sbjct: 1   MAADQRRKQLNGASLVSYGSPEQNRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKR 60

Query: 60  EQIGISRRQMKPFVNFVSNDHKVLADVFTMPQEIFSLDNLSEVLSYEVWKTLLSENERNL 119
           EQIGIS RQ +PF  F  N H+VLADV  MP+EIF LD+LSEVLSYEVW T LS++ERN 
Sbjct: 61  EQIGISWRQTRPFARFDHNGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDDERNF 120

Query: 120 LMQFLPSGLEPHHAVEELLSGSNFQFGNPLLKWGASLCLGDLHPDMIVDRELHLKAENRA 179
           L QFLP  LEP+  V+ELLSG    FGNP LKWGASLC GDLHPDMIV  E HLK++ RA
Sbjct: 121 LKQFLPGDLEPNQVVQELLSGDELHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKSDRRA 180

Query: 180 YYSQLYNYHNDMLGFLSKLKERWKSCKDPEKEFFQKIRRSKHDEKKMP-SNLNESRIFDR 238
           Y+SQL  YH DM+GFL KLKERW++CK+ EKE   KI RSK+D KK   SNL+E R  D 
Sbjct: 181 YFSQLRKYHKDMIGFLIKLKERWETCKNSEKEILPKILRSKNDIKKRKRSNLDEFRDDDH 240

Query: 239 DEN--VTSDSCSWDAEEKACSSDNQIS 263
           D N  VTS S SWD EEKA  SD QIS
Sbjct: 241 DGNVTVTSKSYSWDEEEKAY-SDIQIS 266


>Medtr2g096000.2 | DNA-binding protein, putative | HC |
           chr2:40969983-40975546 | 20130731
          Length = 1346

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 88  TMPQEIFSLDNLSEVLSYEVWKTLLSENERNLLMQFLPSGLEPH--HAVEELLSGSNFQF 145
           ++P E++ L  L ++LS +VW   LSE ER  L ++LP   +      ++EL +G NFQF
Sbjct: 83  SIPLELYDLSGLEDILSVDVWNDCLSEEERFELAKYLPDMDQETFVQTLKELFTGCNFQF 142

Query: 146 GNPLLKWGASLCLGDLHPDMIVDRELHLKAENRAYYSQLYNYHNDMLGFLSKLKERWKSC 205
           G+P+ K    L  G   P + + RE     + R +Y  L  + N M+  L ++++ W +C
Sbjct: 143 GSPVKKLFDMLKGGLCEPRVALYREGLNFVQKRQHYHLLKKHQNTMVSNLCQMRDAWLNC 202

Query: 206 K 206
           +
Sbjct: 203 R 203


>Medtr2g096000.1 | DNA-binding protein, putative | HC |
           chr2:40970730-40974851 | 20130731
          Length = 1373

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 88  TMPQEIFSLDNLSEVLSYEVWKTLLSENERNLLMQFLPSGLEPH--HAVEELLSGSNFQF 145
           ++P E++ L  L ++LS +VW   LSE ER  L ++LP   +      ++EL +G NFQF
Sbjct: 82  SIPLELYDLSGLEDILSVDVWNDCLSEEERFELAKYLPDMDQETFVQTLKELFTGCNFQF 141

Query: 146 GNPLLKWGASLCLGDLHPDMIVDRELHLKAENRAYYSQLYNYHNDMLGFLSKLKERWKSC 205
           G+P+ K    L  G   P + + RE     + R +Y  L  + N M+  L ++++ W +C
Sbjct: 142 GSPVKKLFDMLKGGLCEPRVALYREGLNFVQKRQHYHLLKKHQNTMVSNLCQMRDAWLNC 201

Query: 206 K 206
           +
Sbjct: 202 R 202