Miyakogusa Predicted Gene

Lj0g3v0026819.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0026819.1 tr|D7LPX2|D7LPX2_ARALL Calcium ion binding
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT,39.52,9e-18,Oxygen-evolving enhancer protein
3,,PsbQ-like domain; PsbQ,Photosystem II PsbQ, oxygen evolving
comp,NODE_59878_length_1545_cov_30.031715.path2.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064070.1 | oxygen-evolving enhancer protein | HC | chr3:2...   237   6e-63
Medtr3g064070.2 | oxygen-evolving enhancer protein | HC | chr3:2...   237   6e-63
Medtr8g005175.1 | oxygen-evolving enhancer protein | HC | chr8:8...    63   2e-10
Medtr2g082580.1 | oxygen-evolving enhancer protein | HC | chr2:3...    49   3e-06

>Medtr3g064070.1 | oxygen-evolving enhancer protein | HC |
           chr3:28811778-28813888 | 20130731
          Length = 177

 Score =  237 bits (604), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/181 (65%), Positives = 140/181 (77%), Gaps = 7/181 (3%)

Query: 1   MVLRSFILQPNLTHLLPTCKFCVKP-SFQHSQQKEFSLKISRRVGVLAAMASLILGGEGI 59
           M LR+F LQPN+THL P    CVKP +FQH  QK FSLKISRR         LI  GE I
Sbjct: 1   MELRTFTLQPNMTHLFPKFTCCVKPYNFQHLHQKNFSLKISRR------NLGLIFSGECI 54

Query: 60  FSSQSAYASEFAFMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALL 119
           F ++ A A +F  + PD TVEEAQN  +VHAQDLLQVR+LL ++SWK AQ+ LR+SSALL
Sbjct: 55  FRTKGANAFDFGLVVPDQTVEEAQNVVRVHAQDLLQVRDLLESKSWKIAQKELRRSSALL 114

Query: 120 RKDLYAIIQSKPGSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDIL 179
           +KD+Y IIQ+KPGSER QLR L+S LFNNV+RLDYAARD+D PE+W+RYENIVVAVN+IL
Sbjct: 115 KKDIYTIIQNKPGSERSQLRVLYSTLFNNVTRLDYAARDQDGPEVWQRYENIVVAVNEIL 174

Query: 180 S 180
           S
Sbjct: 175 S 175


>Medtr3g064070.2 | oxygen-evolving enhancer protein | HC |
           chr3:28811890-28813945 | 20130731
          Length = 177

 Score =  237 bits (604), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/181 (65%), Positives = 140/181 (77%), Gaps = 7/181 (3%)

Query: 1   MVLRSFILQPNLTHLLPTCKFCVKP-SFQHSQQKEFSLKISRRVGVLAAMASLILGGEGI 59
           M LR+F LQPN+THL P    CVKP +FQH  QK FSLKISRR         LI  GE I
Sbjct: 1   MELRTFTLQPNMTHLFPKFTCCVKPYNFQHLHQKNFSLKISRR------NLGLIFSGECI 54

Query: 60  FSSQSAYASEFAFMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALL 119
           F ++ A A +F  + PD TVEEAQN  +VHAQDLLQVR+LL ++SWK AQ+ LR+SSALL
Sbjct: 55  FRTKGANAFDFGLVVPDQTVEEAQNVVRVHAQDLLQVRDLLESKSWKIAQKELRRSSALL 114

Query: 120 RKDLYAIIQSKPGSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDIL 179
           +KD+Y IIQ+KPGSER QLR L+S LFNNV+RLDYAARD+D PE+W+RYENIVVAVN+IL
Sbjct: 115 KKDIYTIIQNKPGSERSQLRVLYSTLFNNVTRLDYAARDQDGPEVWQRYENIVVAVNEIL 174

Query: 180 S 180
           S
Sbjct: 175 S 175


>Medtr8g005175.1 | oxygen-evolving enhancer protein | HC |
           chr8:83317-85681 | 20130731
          Length = 232

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 72  FMAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKP 131
           ++ P LT  EA   AK  A++++  ++ +  ++W   Q  LR  +  LR DL  II +KP
Sbjct: 122 YLQP-LTPTEAAARAKESAKEIVAAKKFIDQKAWPYLQNDLRLRAGYLRYDLNTIISAKP 180

Query: 132 GSERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILS 180
             ++  L+ L   LF ++  LDYAA+ K   +  + Y   V  +ND+LS
Sbjct: 181 KDQKKSLKELTGKLFQDIDNLDYAAKVKSPSDAEKYYAIAVSTLNDVLS 229


>Medtr2g082580.1 | oxygen-evolving enhancer protein | HC |
           chr2:34656157-34654413 | 20130731
          Length = 230

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 52/93 (55%)

Query: 87  KVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERPQLRNLFSILF 146
           K +A DLL + +L+  ++    +R LR  S  +  D   +I + P  ++ QL ++ + LF
Sbjct: 128 KKYAFDLLAMADLIAQDTLNYVRRYLRLKSTFMYFDFDKVISAVPVEDKQQLTDVANKLF 187

Query: 147 NNVSRLDYAARDKDVPEIWRRYENIVVAVNDIL 179
           +N  +L+ A+R+K++ E    Y+   V + D++
Sbjct: 188 DNFEKLEEASRNKNLLETQACYKETEVMLKDVM 220