Miyakogusa Predicted Gene
- Lj0g3v0026789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0026789.1 Non Characterized Hit- tr|I3SWC8|I3SWC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,60.62,0,no
description,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LRAT,LRAT-like
domai,NODE_53624_length_845_cov_37.029587.path1.1
(239 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076250.1 | lecithin retinol acyltransferase | HC | chr5:3... 270 7e-73
Medtr1g057650.1 | lecithin retinol acyltransferase | HC | chr1:2... 234 5e-62
Medtr3g064020.1 | lecithin retinol acyltransferase | LC | chr3:2... 225 2e-59
Medtr7g117750.1 | lecithin retinol acyltransferase | HC | chr7:4... 201 4e-52
Medtr3g063990.1 | lecithin retinol acyltransferase | LC | chr3:2... 182 3e-46
>Medtr5g076250.1 | lecithin retinol acyltransferase | HC |
chr5:32478491-32483095 | 20130731
Length = 254
Score = 270 bits (691), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/244 (55%), Positives = 162/244 (66%), Gaps = 15/244 (6%)
Query: 1 MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCL--- 57
M + SN+ID QLNPGDHIYSWRQAY+YAHHGIYVG+G V+HFT+ E G G+ L
Sbjct: 1 MGVFSNKIDHEQLNPGDHIYSWRQAYIYAHHGIYVGDGMVLHFTRGGGQEIGTGTVLDRF 60
Query: 58 -IISSLLSPTEIPCPTCGEQTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGT 116
SS + T+ PCP CG+Q +TDGV+SSC+DCFL+G +LY FEYGVS +FLAK RGGT
Sbjct: 61 LCSSSPSNGTDTPCPKCGDQNKTDGVVSSCLDCFLSGDNLYLFEYGVSAAYFLAKARGGT 120
Query: 117 CTLASSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLVW-----GQSGQVX 171
CTLA SDP E+VL RA FL ENGFGGY+VF NCEDFAIYCKTGLL+ G+SGQ
Sbjct: 121 CTLAVSDPTEDVLRRASFLFENGFGGYNVFNNNCEDFAIYCKTGLLIITSISVGRSGQAA 180
Query: 172 XXXXXXXXXXWSPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVRKDKIKIPVEK 231
+P+R MTT YC SR DIGVR+D K+PVEK
Sbjct: 181 SCLAAASAVISTPLRFMTT------SFSGLAAVGYGMYCVSRFVSDIGVRRDVSKVPVEK 234
Query: 232 IAEM 235
+ +
Sbjct: 235 LVAL 238
>Medtr1g057650.1 | lecithin retinol acyltransferase | HC |
chr1:25342939-25339608 | 20130731
Length = 264
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 154/241 (63%), Gaps = 16/241 (6%)
Query: 1 MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCL--- 57
M LLSNR+ R L GDHIYSWR AY+YAHHGIY+G+ KVIHFT+R E G G+ L
Sbjct: 1 MGLLSNRVTRESLKAGDHIYSWRTAYIYAHHGIYIGDDKVIHFTRRGQ-EVGTGTVLDVL 59
Query: 58 IISSLLSPTEIPCPTCGEQTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGTC 117
++SS + ++ CP C GV+ SC++CFL GG LYRFEY VS FLAK RGGTC
Sbjct: 60 LLSSAPARSQEICPICIPSQEDHGVVVSCLNCFLAGGVLYRFEYAVSPALFLAKARGGTC 119
Query: 118 TLASSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLV-----WGQSGQ-VX 171
TLA SD + V+HRA +LLENGF Y+VFK NCEDFAIYCKTGL+V GQSGQ V
Sbjct: 120 TLAVSDEDDVVVHRALYLLENGFRCYNVFKNNCEDFAIYCKTGLVVVDERTIGQSGQAVS 179
Query: 172 XXXXXXXXXXWSPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVRKDKIKIPVEK 231
+P+RL+TT YCASR + DIG+R+D +KI VE+
Sbjct: 180 IIGGPLAAVLSTPLRLVTT------NVYGMAATAVGVYCASRYAADIGMRRDVVKIQVEE 233
Query: 232 I 232
+
Sbjct: 234 L 234
>Medtr3g064020.1 | lecithin retinol acyltransferase | LC |
chr3:28791368-28790464 | 20130731
Length = 251
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 149/253 (58%), Gaps = 21/253 (8%)
Query: 1 MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCLIIS 60
M +LSN+IDR+QL GDHIYSWRQAY+YAHHGIY+G+ VIHFT + G I+
Sbjct: 1 MEVLSNKIDRKQLKTGDHIYSWRQAYVYAHHGIYIGDEMVIHFTI-GSGQQATGIPAILD 59
Query: 61 SLLSP------TEIPCPTCGE--QTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKV 112
+ T++PC C E +TR GV SSC+DCFL+GG LY F+YGVS + FLA+
Sbjct: 60 RFFTSSAPSFDTKLPCQRCREAAETRNHGVFSSCLDCFLSGGQLYLFQYGVSKLQFLAQA 119
Query: 113 RGGTCTLASSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLVW--GQSGQV 170
RGGTCTLASSDP EEVL RA +LLE GFG Y + K NCEDFA+YCKTGL G SGQ
Sbjct: 120 RGGTCTLASSDPTEEVLPRALYLLEKGFGCYHISKNNCEDFAVYCKTGLFATTKGCSGQA 179
Query: 171 XXXXXXXXXXXWSPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVR----KDKIK 226
S R + + YC RL DIG R KD K
Sbjct: 180 ASYLAATSTVASSSFRFVNS------SLFGKALVGCGTYCIKRLVSDIGFRYEVIKDVTK 233
Query: 227 IPVEKIAEMAREG 239
+PVE+I E+ E
Sbjct: 234 VPVERIPELTMEA 246
>Medtr7g117750.1 | lecithin retinol acyltransferase | HC |
chr7:48908813-48907086 | 20130731
Length = 259
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 139/239 (58%), Gaps = 12/239 (5%)
Query: 1 MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCLIIS 60
M L+SNRI++ + PGDH+Y++R + Y+HHGI+VG KV+HF + ++ + +
Sbjct: 1 MGLISNRIEKHDIKPGDHVYTYRAVFSYSHHGIFVGGSKVVHFRPDRNFKSITETSSNVD 60
Query: 61 SLLSPTEIPCPTCGEQTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGTCTLA 120
P CG + GV+ SC+DCFL G LY FEYGVS FL ++RGGTCT A
Sbjct: 61 DPTPTPCPTFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTLFLTRIRGGTCTTA 120
Query: 121 SSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLV-----WGQSGQVXXXXX 175
DPPE V+HRA +LL+NGFG YDVF+ NCEDFA+YCKTGLL+ G+SGQ
Sbjct: 121 LPDPPETVIHRAMYLLQNGFGNYDVFQNNCEDFAMYCKTGLLIVDKQGVGRSGQASSVIG 180
Query: 176 XXXXXXW-SPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVRKDKIKIPVEKIA 233
SP++L+ YC SR + DIGVR D +K+ VE +A
Sbjct: 181 APLAAMLSSPLKLLMP------SPVGMATVTAGMYCMSRYATDIGVRSDVVKVGVEDLA 233
>Medtr3g063990.1 | lecithin retinol acyltransferase | LC |
chr3:28784361-28783379 | 20130731
Length = 272
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 123/207 (59%), Gaps = 46/207 (22%)
Query: 8 IDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPEN---------------- 51
IDR+QL GDHIYSWRQAY+YAHHGIYVG+G VIHFT A +
Sbjct: 2 IDRKQLKAGDHIYSWRQAYIYAHHGIYVGDGMVIHFTDGAIQQTETPTISNRFCSSSVPS 61
Query: 52 ------------------------GKGSCLIISSLLS-PTEIPCPTCGE--QTRTDGVIS 84
SC SS+ S T+IPCP CG+ QT+ GVI
Sbjct: 62 CRSSVPSCRSSVPSSRSSVPSCRSSVPSCR--SSVPSLDTDIPCPRCGDCCQTKMHGVIL 119
Query: 85 SCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGTCTLASSDPPEEVLHRAQFLLENGFGGYD 144
SC+DCFL+ G L+R+ YGVS + F+ + RGGTCT ASSDP +EVL RA +LLENGFG Y
Sbjct: 120 SCLDCFLSEGGLHRYLYGVSTLHFIVQARGGTCTRASSDPTKEVLFRALYLLENGFGDYH 179
Query: 145 VFKKNCEDFAIYCKTGLLVW-GQSGQV 170
+K NCEDFAIYCKTG L G SGQ
Sbjct: 180 FYKNNCEDFAIYCKTGFLSSEGGSGQA 206