Miyakogusa Predicted Gene

Lj0g3v0023849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0023849.1 tr|I3SUT5|I3SUT5_LOTJA Triosephosphate isomerase
OS=Lotus japonicus PE=2 SV=1,88.05,0,TRIOSEPHOSPHATE
ISOMERASE,Triosephosphate isomerase; no description,Aldolase-type TIM
barrel; Triose,CUFF.1367.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096940.1 | cytosolic triosephosphate isomerase | HC | chr...   395   e-110
Medtr7g103020.1 | triosephosphate isomerase | HC | chr7:41410097...   261   5e-70

>Medtr2g096940.1 | cytosolic triosephosphate isomerase | HC |
           chr2:41427205-41430392 | 20130731
          Length = 253

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/253 (77%), Positives = 211/253 (83%)

Query: 1   MGRKFFIGGNWKCNGTTEEAKKIVGTLNEANVPGEDIXXXXXXXXXXXXXXXKALLHSNF 60
           MGRKFF+GGNWKCNGTTEE KKIVGTLNEA VPGED+               K+LL S+F
Sbjct: 1   MGRKFFVGGNWKCNGTTEEVKKIVGTLNEAQVPGEDVVEVVVSPPYVFLPFVKSLLRSDF 60

Query: 61  HVAAQNCWVHKGGAYTGEVSAEMLVNLDIPWVILGPXXXXXXXXXXNEFVGDKVAYALSQ 120
           HVAAQN WV KGGAYTGE+SAEMLVNLDIPWVILG           NEFVGDKVAYALS 
Sbjct: 61  HVAAQNAWVRKGGAYTGEISAEMLVNLDIPWVILGHSERRQLLNETNEFVGDKVAYALSL 120

Query: 121 GLKVIACIGETLEQREAGTTLAVVAEQTKAIAAKIPDWDNVVLAYEPIWAIGTGKAATPA 180
           G KVIACIGETLEQREAGTT+AVVAEQTKAIA K+ +WDNVVLAYEP+WAIGTGK A+PA
Sbjct: 121 GRKVIACIGETLEQREAGTTIAVVAEQTKAIADKVSNWDNVVLAYEPVWAIGTGKVASPA 180

Query: 181 QAQEVHADLRKWIHDNVSAEVAVTVRLIYGGSVNGTNSKELAAQPDIDGFLVGRASLKLE 240
           QAQEVHA LRKW+HDNV AEVA +VR+IYGGSVNG NSKELA+QPDIDGFLVG ASLK E
Sbjct: 181 QAQEVHAALRKWVHDNVGAEVAASVRIIYGGSVNGGNSKELASQPDIDGFLVGGASLKPE 240

Query: 241 FVDIINAATVKKN 253
           F+DIIN+ATVKKN
Sbjct: 241 FIDIINSATVKKN 253


>Medtr7g103020.1 | triosephosphate isomerase | HC |
           chr7:41410097-41414162 | 20130731
          Length = 312

 Score =  261 bits (666), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 135/251 (53%), Positives = 164/251 (65%), Gaps = 5/251 (1%)

Query: 4   KFFIGGNWKCNGTTEEAKKIVGTLNEANV-PGEDIXXXXXXXXXXXXXXXKALLHSNFHV 62
           KFF+GGNWKCNGT +   K++  LN A + P  D+               K  +     +
Sbjct: 62  KFFVGGNWKCNGTKDSISKLISDLNNAKLEPDVDVVVAPPFVYIDQV---KTSITDRIEI 118

Query: 63  AAQNCWVHKGGAYTGEVSAEMLVNLDIPWVILGPXXXXXXXXXXNEFVGDKVAYALSQGL 122
           + QN WV KGGA+TGE+S E L +L   WVILG           +EF+G K AYALS+GL
Sbjct: 119 SGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGL 178

Query: 123 KVIACIGETLEQREAGTTLAVVAEQTKAIAAKIPDWDNVVLAYEPIWAIGTGKAATPAQA 182
            VIACIGE LE+REAG T  V  +Q KA A  +P WDN+V+AYEP+WAIGTGK A+P QA
Sbjct: 179 GVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGKVASPEQA 238

Query: 183 QEVHADLRKWIHDNVSAEVAVTVRLIYGGSVNGTNSKELAAQPDIDGFLVGRASLK-LEF 241
           QEVH  LR W+ +NVSAEVA   R+IYGGSVNG NS +LA + DIDGFLVG ASLK  EF
Sbjct: 239 QEVHVALRDWLKNNVSAEVASKTRIIYGGSVNGGNSADLAKKEDIDGFLVGGASLKGPEF 298

Query: 242 VDIINAATVKK 252
             I+N+ T KK
Sbjct: 299 ATIVNSVTSKK 309