Miyakogusa Predicted Gene

Lj0g3v0022569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0022569.1 Non Characterized Hit- tr|I1HKF6|I1HKF6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,45.22,2e-18,seg,NULL,CUFF.1263.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g465040.1 | Sgf11 (transcriptional regulation protein) pro...   116   4e-27

>Medtr3g465040.1 | Sgf11 (transcriptional regulation protein)
           protein | HC | chr3:26291118-26286922 | 20130731
          Length = 180

 Score =  116 bits (291), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 65/108 (60%)

Query: 1   MSAPNEEXXXXXXXXXXXXXXXXXXXIIVDVASECHRVARXXXXXXXXXXXXXXXXXAQA 60
           MS P+EE                   IIVDVASECHRVA+                 AQA
Sbjct: 1   MSVPDEENLPSQSQLSSHFFSDLLDSIIVDVASECHRVAKLGLDANLDEEDEELKLSAQA 60

Query: 61  RVRVADPSNNNEANGKYLVDIFGQTHPPVADEIFECMNCGRSIMAGRV 108
           RVRVADPSN+NE NGKY+VDIFGQ HP VA EIFECMNCGR+I AG+ 
Sbjct: 61  RVRVADPSNSNETNGKYVVDIFGQNHPAVATEIFECMNCGRTIAAGKF 108