Miyakogusa Predicted Gene

Lj0g3v0021379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0021379.1 tr|A9S5F6|A9S5F6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74828
,40,4e-18,Starch binding domain,Carbohydrate binding module family 20;
seg,NULL; Starch-binding domain-like,Ca,CUFF.1183.1
         (545 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g015550.1 | starch-binding domain protein | HC | chr4:4662...   549   e-156
Medtr4g015550.2 | starch-binding domain protein | HC | chr4:4662...   409   e-114
Medtr6g093240.1 | phosphoglucan, water dikinase | HC | chr6:3524...    52   2e-06

>Medtr4g015550.1 | starch-binding domain protein | HC |
           chr4:4662810-4667689 | 20130731
          Length = 520

 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 309/566 (54%), Positives = 368/566 (65%), Gaps = 67/566 (11%)

Query: 1   MKALTSYGSKAISERLGVQV----LHVSDRPEFCFSLRFRNDRKGSNFWLLKLVQNKGYY 56
           MK  TS+ SK I  +LG        HVSDRP  CF+L  RN++K S F LLKLVQNKG  
Sbjct: 1   MKPFTSFSSKPIVHKLGSLSPSISFHVSDRPFSCFTLHSRNEQKSSIFCLLKLVQNKGVC 60

Query: 57  PVHALPAKTQ-VDLEAAEPQVAQSEQINESKFVRVAFQLQKDCDFGEQFLIVGDHPILGS 115
           P+H +P++ Q VDLE  E QV QSEQ N+SKFVRV FQL KDCDFGEQFLIVGD P LG 
Sbjct: 61  PLHVVPSEHQEVDLEPVESQVQQSEQTNDSKFVRVEFQLLKDCDFGEQFLIVGDDPKLGL 120

Query: 116 WEPTEALPMTWSDGHVWTIELDMPVGESILFKFILKGKEGDIIWQPGSDRVINTWETMNK 175
           W P +ALP+TWSDGH+WT+ELDMP G+SIL+KFILKGKEGDIIWQPG DRVI TWETMN+
Sbjct: 121 WNPLDALPLTWSDGHIWTVELDMPAGKSILYKFILKGKEGDIIWQPGLDRVIQTWETMNR 180

Query: 176 IIVFEDWENAELQEIIEEDQFSQSNEKPQDNSEVLISAEILNNPPEALESNEKPQDNSEV 235
           IIV EDWENAELQ+IIEED  SQ+NE+P    EV  S +I+                   
Sbjct: 181 IIVLEDWENAELQKIIEEDTLSQTNEEPPVLPEVSTSTDIV------------------- 221

Query: 236 LISAEILNNPQEDLESNVSQTSGIQDIQTDAEEKPLAEPVLQHLT--XXXXXXXIEKPMA 293
                                SGI++ Q D  EK + EPVLQ +          IE PM+
Sbjct: 222 ---------------------SGIEETQIDTLEKLIDEPVLQQIIDDHDSNSSSIENPMS 260

Query: 294 MVAENIDSSEDFVESTSHQKDIRNMIQQNEESANSPRNDVVIHHLGRNGNAAPLKNQEGT 353
           M AENI SSED  ES S      N++Q++EESA+  +ND + H LG NGN A LKN++GT
Sbjct: 261 MFAENIGSSEDLTESKSQTTYKANVVQKSEESADGFQNDDIKHELGYNGNPAALKNKKGT 320

Query: 354 IAERSLFDFEXXXXXXXXXXXXSEEAGPGEV--EEKTTMGPSVEALETQDQNIPEFSEEQ 411
           I E SL DFE            +EEAGP EV  EEKT + PS+E+ ETQDQNIPE S+EQ
Sbjct: 321 IVEGSLIDFEGGPVLVPGLIPLTEEAGPSEVVEEEKTAVEPSIESFETQDQNIPELSKEQ 380

Query: 412 ELNDDKPQEVNATIHDDP----------ELLDNEHEEQFHLASAMEDRSRSDPVYGNPLQ 461
             ND+  QE+++T +D+           EL  N HEEQF+LAS ME+ S S+P++GN LQ
Sbjct: 381 VSNDETAQEISSTSNDETAQEISSTINDEL--NFHEEQFYLASTMEEGSNSEPIHGNALQ 438

Query: 462 NDIQWGREKFSKEQESDDGKRQEI--NGTIHDEPEQLDNEHEEQFQLASAMEDRLNSKPV 519
           NDIQWG E  SK+QESDD   QEI  N TI+DE     N HEEQF LAS ME+  NS+P 
Sbjct: 439 NDIQWGFETLSKDQESDDDTPQEIITNTTINDEL----NSHEEQFHLASTMEEESNSEPT 494

Query: 520 YGNPLQKDIQWGRETVKKFLTVLGFL 545
           +GN L+ DI+WGRETVKKFLT  G L
Sbjct: 495 HGNALRNDIEWGRETVKKFLTKFGLL 520


>Medtr4g015550.2 | starch-binding domain protein | HC |
           chr4:4662810-4665655 | 20130731
          Length = 378

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/417 (54%), Positives = 267/417 (64%), Gaps = 49/417 (11%)

Query: 1   MKALTSYGSKAISERLGVQV----LHVSDRPEFCFSLRFRNDRKGSNFWLLKLVQNKGYY 56
           MK  TS+ SK I  +LG        HVSDRP  CF+L  RN++K S F LLKLVQNKG  
Sbjct: 1   MKPFTSFSSKPIVHKLGSLSPSISFHVSDRPFSCFTLHSRNEQKSSIFCLLKLVQNKGVC 60

Query: 57  PVHALPAKTQ-VDLEAAEPQVAQSEQINESKFVRVAFQLQKDCDFGEQFLIVGDHPILGS 115
           P+H +P++ Q VDLE  E QV QSEQ N+SKFVRV FQL KDCDFGEQFLIVGD P LG 
Sbjct: 61  PLHVVPSEHQEVDLEPVESQVQQSEQTNDSKFVRVEFQLLKDCDFGEQFLIVGDDPKLGL 120

Query: 116 WEPTEALPMTWSDGHVWTIELDMPVGESILFKFILKGKEGDIIWQPGSDRVINTWETMNK 175
           W P +ALP+TWSDGH+WT+ELDMP G+SIL+KFILKGKEGDIIWQPG DRVI TWETMN+
Sbjct: 121 WNPLDALPLTWSDGHIWTVELDMPAGKSILYKFILKGKEGDIIWQPGLDRVIQTWETMNR 180

Query: 176 IIVFEDWENAELQEIIEEDQFSQSNEKPQDNSEVLISAEILNNPPEALESNEKPQDNSEV 235
           IIV EDWENAELQ+IIEED  SQ+NE+P    EV  S +I+                   
Sbjct: 181 IIVLEDWENAELQKIIEEDTLSQTNEEPPVLPEVSTSTDIV------------------- 221

Query: 236 LISAEILNNPQEDLESNVSQTSGIQDIQTDAEEKPLAEPVLQHLT--XXXXXXXIEKPMA 293
                                SGI++ Q D  EK + EPVLQ +          IE PM+
Sbjct: 222 ---------------------SGIEETQIDTLEKLIDEPVLQQIIDDHDSNSSSIENPMS 260

Query: 294 MVAENIDSSEDFVESTSHQKDIRNMIQQNEESANSPRNDVVIHHLGRNGNAAPLKNQEGT 353
           M AENI SSED  ES S      N++Q++EESA+  +ND + H LG NGN A LKN++GT
Sbjct: 261 MFAENIGSSEDLTESKSQTTYKANVVQKSEESADGFQNDDIKHELGYNGNPAALKNKKGT 320

Query: 354 IAERSLFDFEXXXXXXXXXXXXSEEAGPGEV--EEKTTMGPSVEALETQDQNIPEFS 408
           I E SL DFE            +EEAGP EV  EEKT + PS+E+ ETQDQNIPE +
Sbjct: 321 IVEGSLIDFEGGPVLVPGLIPLTEEAGPSEVVEEEKTAVEPSIESFETQDQNIPEVT 377


>Medtr6g093240.1 | phosphoglucan, water dikinase | HC |
           chr6:35241025-35226003 | 20130731
          Length = 1202

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 80  EQINESKFVRVAFQLQKDCDFGEQFLIVGDHPILGSWEPTEALPMTWSDGHVWTIELDMP 139
           E IN    +R+  Q+Q    FG+  +++G    LGSW  T  +P+ W+  + W  +    
Sbjct: 84  EDINVHLHLRLDHQVQ----FGDHVVLLGSTKQLGSW--TTHVPLNWTP-NGWVCDFHFN 136

Query: 140 VGESILFKFILKGKEGDIIWQPGSDRVIN 168
            G+ + FKFI+  ++G + W+ G +RV+N
Sbjct: 137 AGDHLEFKFIIVHQDGTLHWESGDNRVLN 165