Miyakogusa Predicted Gene

Lj0g3v0021209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0021209.1 tr|A9TM45|A9TM45_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_196332,39.68,0.000000000000005, ,CUFF.1170.1
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g462700.1 | hypothetical protein | HC | chr3:25067398-2506...   171   3e-43
Medtr5g069660.1 | hypothetical protein | HC | chr5:29547398-2954...   152   1e-37

>Medtr3g462700.1 | hypothetical protein | HC |
           chr3:25067398-25066482 | 20130731
          Length = 154

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/163 (55%), Positives = 118/163 (72%), Gaps = 11/163 (6%)

Query: 1   MFPKRFQDPKSGFILLSSMRAKKYMNKIGLEGEDYHFFKQVGKALLCTYAILGALWLSNE 60
           MFPKRF+DPK+GF +LSSM AK+YMNKIGLE EDY+F+KQ+GKALLCTY ILG LW+ N 
Sbjct: 1   MFPKRFKDPKTGFHMLSSMHAKQYMNKIGLESEDYYFYKQIGKALLCTYTILGGLWIYNG 60

Query: 61  NSTMDWGKLK-PWPKEELVQDQLSRIREFLHLGD-KGPEEFTDKGLMIGATSGLKGVDES 118
            S ++W + K P  KE+  +         L+LG+ +  +EF  KG MIG T  LKG+ ES
Sbjct: 61  GSPVEWWRKKSPTIKEKFEEAN-------LYLGEVESVKEFIAKGKMIGTT--LKGIVES 111

Query: 119 DKDAENNQKELQSKKFDQEAQNLWLKMRNEVIAELKEKGFDVE 161
           D    + ++E+  +K DQEAQ +WLKM+NEV+AEL+EKG DVE
Sbjct: 112 DDKDASGREEMVKRKADQEAQKMWLKMKNEVVAELREKGIDVE 154


>Medtr5g069660.1 | hypothetical protein | HC |
           chr5:29547398-29546220 | 20130731
          Length = 161

 Score =  152 bits (385), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 109/162 (67%), Gaps = 9/162 (5%)

Query: 4   KRF---QDPKSGFILLSSMRAKKYMNKIGLEGEDYHFFKQVGKALLCTYAILGALWLSNE 60
           KRF     PK+G        A+ ++ KIGL   +Y+F+KQ+GKAL CTYA++GA WL NE
Sbjct: 4   KRFFETPQPKTGL-----EHAQYFLKKIGLGPNNYYFWKQMGKALACTYAVMGAAWLFNE 58

Query: 61  NSTMDWGKLKPWPKEELVQDQLSRIREFLHLGDK-GPEEFTDKGLMIGATSGLKGVDESD 119
            S + W  LKP PKEE   + L + REF + GD+   EEF  KG MIG T G KG+ E+D
Sbjct: 59  TSPLGWWTLKPMPKEEKELEHLYQRREFPYPGDEEAMEEFIKKGGMIGTTIGPKGMVEND 118

Query: 120 KDAENNQKELQSKKFDQEAQNLWLKMRNEVIAELKEKGFDVE 161
            D  + +KEL+ KKF+QEAQ LW +MRNEVI EL+EKGFDV+
Sbjct: 119 MDESDYKKELKDKKFEQEAQKLWFRMRNEVIGELQEKGFDVD 160