Miyakogusa Predicted Gene

Lj0g3v0019169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0019169.1 tr|Q04219|Q04219_ANTMA TNP2 (Fragment)
OS=Antirrhinum majus GN=TAM1 PE=4 SV=1,56.4,0,seg,NULL; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; Transposase_21,Transposon,
En/Spm-like,CUFF.1052.1
         (246 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g057120.1 | hypothetical protein | LC | chr8:18801883-1880...   120   1e-27

>Medtr8g057120.1 | hypothetical protein | LC |
           chr8:18801883-18803131 | 20130731
          Length = 272

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 87/141 (61%), Gaps = 7/141 (4%)

Query: 19  DRFVDVTRGDSGVSEGPNEVANKFYNLIEESKQELYSGCENFSKLSFTIRLYLLKCLYGW 78
           DR  DV      VSE  NE A +FY L  +++Q LY GC  +S+LSF ++LY +KCL G 
Sbjct: 25  DRDEDVI---PSVSEERNE-AKEFYELTRDAEQPLYEGCTRYSRLSFLLKLYHIKCLCGL 80

Query: 79  SNASFDALLELLKEAMPHLNIFDSFNKTKGVIRGLGLDYKKIDACPNDCMLYWKDHENDT 138
           S+ S   +LELLK+A    +I  SF + K  I  LG++Y KI ACPNDCMLYW + E   
Sbjct: 81  SDKSLTMILELLKDAFEFASIPSSFYEAKKTITKLGMNYVKIPACPNDCMLYWGEDEERE 140

Query: 139 SCYVCSASRWVEKADGDNQHE 159
           +C +C+ S+W     G+N+ E
Sbjct: 141 TCKICNTSKW---KSGENEIE 158