Miyakogusa Predicted Gene
- Lj0g3v0018479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0018479.1 tr|I3SWZ4|I3SWZ4_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=2
SV=1,82.14,5e-18,Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; PEPTIDYL-PROLYL CIS-TR,CUFF.1070.1
(76 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g463900.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 93 5e-20
Medtr3g070500.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 75 1e-14
Medtr4g073650.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 60 5e-10
Medtr7g116340.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 52 1e-07
Medtr3g117750.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 52 1e-07
Medtr1g117010.2 | peptidyl-prolyl cis-trans isomerase | HC | chr... 52 2e-07
Medtr1g117010.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 52 2e-07
Medtr4g075290.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 51 3e-07
Medtr7g095750.1 | peptidyl-prolyl cis-trans isomerase | HC | chr... 50 3e-07
Medtr7g095750.2 | peptidyl-prolyl cis-trans isomerase | HC | chr... 50 3e-07
>Medtr3g463900.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr3:25644296-25640419 | 20130731
Length = 203
Score = 93.2 bits (230), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 48/56 (85%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDGRHVVFGKVLSGMDVVYK+EAEGNQSGTPKSKVVIADSGELPL
Sbjct: 148 QFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGNQSGTPKSKVVIADSGELPL 203
>Medtr3g070500.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr3:31635225-31631615 | 20130731
Length = 233
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 40/43 (93%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
LDGRHVVFGKVLSGMDV++K+EAEG++SG+PK VVI DSGEL
Sbjct: 189 LDGRHVVFGKVLSGMDVLHKIEAEGSESGSPKRTVVILDSGEL 231
>Medtr4g073650.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr4:27939887-27936010 | 20130731
Length = 223
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKME-AEGNQSGTPKSKVVIADSGELP 75
LDG HVVFGKV+ GMD V+ +E G SG P+ KVVIADSGE+P
Sbjct: 171 LDGDHVVFGKVVQGMDTVFAIEGGAGTYSGKPRKKVVIADSGEIP 215
>Medtr7g116340.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr7:47977433-47979285 | 20130731
Length = 172
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K + LDG+HVVFGKV+ G DVV ME G+Q+G
Sbjct: 105 LSMANSGPNTNGSQFFICTSK-------TQWLDGKHVVFGKVVEGYDVVQAMEKVGSQNG 157
Query: 61 TPKSKVVIADSGEL 74
VVI D G++
Sbjct: 158 RTSKHVVIEDCGQI 171
>Medtr3g117750.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr3:55138179-55139030 | 20130731
Length = 191
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K ++ LDG+HVVFG+V+ GM+VV ++E G+ SG
Sbjct: 113 LSMANAGPGTNGSQFFICTAK-------TEWLDGKHVVFGEVVEGMEVVKEIEKVGSGSG 165
Query: 61 TPKSKVVIADSGEL 74
VVIAD G+L
Sbjct: 166 KTSKPVVIADCGQL 179
>Medtr1g117010.2 | peptidyl-prolyl cis-trans isomerase | HC |
chr1:52947034-52942152 | 20130731
Length = 244
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELPL 76
LD RHVVFG+VL GMD+V +E++ G P KV I+D GELP+
Sbjct: 198 LDQRHVVFGQVLEGMDIVRLIESQETDRGDRPLKKVTISDCGELPI 243
>Medtr1g117010.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr1:52947034-52934517 | 20130731
Length = 244
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELPL 76
LD RHVVFG+VL GMD+V +E++ G P KV I+D GELP+
Sbjct: 198 LDQRHVVFGQVLEGMDIVRLIESQETDRGDRPLKKVTISDCGELPI 243
>Medtr4g075290.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr4:28754977-28753853 | 20130731
Length = 172
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K ++ LDG+HVVFG+V+ G+D+V ++E G+ SG
Sbjct: 105 LSMANAGPGTNGSQFFICTAK-------TEWLDGKHVVFGQVVEGLDIVKEIEKVGSGSG 157
Query: 61 TPKSKVVIADSGEL 74
VVIAD G++
Sbjct: 158 KTSKPVVIADCGQV 171
>Medtr7g095750.1 | peptidyl-prolyl cis-trans isomerase | HC |
chr7:38378566-38384594 | 20130731
Length = 651
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 13 STFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSG 72
S F FK+ AH LDG+HVVFGKV G++++ KME G G P + I D G
Sbjct: 121 SQFFIIFKR---QAH----LDGKHVVFGKVTKGIEILKKMEQLGTADGKPTQPIKIVDCG 173
Query: 73 EL 74
E+
Sbjct: 174 EV 175
>Medtr7g095750.2 | peptidyl-prolyl cis-trans isomerase | HC |
chr7:38378415-38384646 | 20130731
Length = 651
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 13 STFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSG 72
S F FK+ AH LDG+HVVFGKV G++++ KME G G P + I D G
Sbjct: 121 SQFFIIFKR---QAH----LDGKHVVFGKVTKGIEILKKMEQLGTADGKPTQPIKIVDCG 173
Query: 73 EL 74
E+
Sbjct: 174 EV 175