Miyakogusa Predicted Gene

Lj0g3v0017229.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0017229.2 CUFF.963.2
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g059030.1 | hypothetical protein | HC | chr5:24360933-2435...   163   7e-41
Medtr5g058660.1 | hypothetical protein | HC | chr5:24324327-2432...   163   7e-41

>Medtr5g059030.1 | hypothetical protein | HC |
           chr5:24360933-24359463 | 20130731
          Length = 133

 Score =  163 bits (412), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 89/137 (64%), Positives = 98/137 (71%), Gaps = 10/137 (7%)

Query: 26  PLLCIGDLLGDVXXXXXXXXXXXXXSLRRETSPPPPASDLSNAPPLPLPDLTKLFQENYE 85
           PLLCIGDLL DV                 +TSP    SDL+N     LP LTKLFQENY+
Sbjct: 7   PLLCIGDLLTDVGEENEQEGI-------EKTSPSSSLSDLNNNA---LPHLTKLFQENYD 56

Query: 86  HLNSALAGTDHTWPSLTLKLCTALETANQLVQCTNSNVASLLEKVEELQKIVKRGDSAIV 145
           HLNSAL  TDH+W SLTLKLCT+L+TAN+LVQ TNSNVASLLEKVEEL+KIVKRGDSAI 
Sbjct: 57  HLNSALNATDHSWTSLTLKLCTSLDTANKLVQSTNSNVASLLEKVEELEKIVKRGDSAIA 116

Query: 146 AAKAVYVTQDNQSGSLK 162
           A KA YV  DN S +LK
Sbjct: 117 ATKAFYVAPDNNSSALK 133


>Medtr5g058660.1 | hypothetical protein | HC |
           chr5:24324327-24322762 | 20130731
          Length = 133

 Score =  163 bits (412), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 89/137 (64%), Positives = 98/137 (71%), Gaps = 10/137 (7%)

Query: 26  PLLCIGDLLGDVXXXXXXXXXXXXXSLRRETSPPPPASDLSNAPPLPLPDLTKLFQENYE 85
           PLLCIGDLL DV                 +TSP    SDL+N     LP LTKLFQENY+
Sbjct: 7   PLLCIGDLLTDVGEENEQEGI-------EKTSPSSSLSDLNNNA---LPHLTKLFQENYD 56

Query: 86  HLNSALAGTDHTWPSLTLKLCTALETANQLVQCTNSNVASLLEKVEELQKIVKRGDSAIV 145
           HLNSAL  TDH+W SLTLKLCT+L+TAN+LVQ TNSNVASLLEKVEEL+KIVKRGDSAI 
Sbjct: 57  HLNSALNATDHSWTSLTLKLCTSLDTANKLVQSTNSNVASLLEKVEELEKIVKRGDSAIA 116

Query: 146 AAKAVYVTQDNQSGSLK 162
           A KA YV  DN S +LK
Sbjct: 117 ATKAFYVAPDNNSSALK 133