Miyakogusa Predicted Gene

Lj0g3v0016699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016699.1 Non Characterized Hit- tr|I1N1V7|I1N1V7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,92.86,0.0000000000004, ,1995_g.1
         (65 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g471180.1 | kinesin-like protein for actin based movement ...    97   3e-21

>Medtr8g471180.1 | kinesin-like protein for actin based movement
            protein | HC | chr8:28778502-28794714 | 20130731
          Length = 1297

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/65 (73%), Positives = 52/65 (80%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGAL 60
            +SL+EMKQ+F             RTADGTRARYSRLYRTLATKVPSLRDLV+ELEKGGAL
Sbjct: 1233 LSLDEMKQIFSELPEALSLLALARTADGTRARYSRLYRTLATKVPSLRDLVNELEKGGAL 1292

Query: 61   KDVRT 65
            KDVRT
Sbjct: 1293 KDVRT 1297