Miyakogusa Predicted Gene

Lj0g3v0016519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016519.1 Non Characterized Hit- tr|I3T4A5|I3T4A5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.59,0,seg,NULL;
PTPLA,Protein-tyrosine phosphatase-like, PTPLA; SUBFAMILY NOT
NAMED,NULL; PTPLA DOMAIN
PRO,NODE_46595_length_832_cov_113.840141.path1.1
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g471160.1 | 3-hydroxyacyl-CoA dehydratase | HC | chr8:2876...   238   2e-63
Medtr8g471160.2 | 3-hydroxyacyl-CoA dehydratase | HC | chr8:2876...   194   2e-50
Medtr4g060990.1 | tyrosine phosphatase-like protein PTPLB protei...    67   5e-12

>Medtr8g471160.1 | 3-hydroxyacyl-CoA dehydratase | HC |
           chr8:28767335-28770414 | 20130731
          Length = 221

 Score =  238 bits (607), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 118/150 (78%), Positives = 130/150 (86%)

Query: 17  NWTVFFGWVQVLYLVLKTLKESGHEHVYSAAEKPLILAQTAAVLEILHGLVGLVRSPITA 76
           N+TV FGW+QVL+LVLKTLKE GH++VYS A+KPL+ AQTAA+LEILHGLVG+VRSPI+A
Sbjct: 17  NFTVLFGWLQVLFLVLKTLKEMGHQNVYSVAQKPLLFAQTAAILEILHGLVGIVRSPISA 76

Query: 77  TLPQISSRLFLVWGILWSFPETRTHXXXXXXXXXXXXTEIIRYLFFGFKEAFGFAPSWLL 136
           TLPQISSRLFLVWGILWSFPET+TH            TEIIRY FFG KEAF F+PSWLL
Sbjct: 77  TLPQISSRLFLVWGILWSFPETQTHFLVSSLLISWSITEIIRYSFFGLKEAFSFSPSWLL 136

Query: 137 WLRYSTFLVLYPTGISSEVGLIYIVLPFIK 166
           WLRYSTFLVLYPTGISSEVGLIYI LPFIK
Sbjct: 137 WLRYSTFLVLYPTGISSEVGLIYIALPFIK 166


>Medtr8g471160.2 | 3-hydroxyacyl-CoA dehydratase | HC |
           chr8:28767335-28770380 | 20130731
          Length = 156

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 108/130 (83%)

Query: 17  NWTVFFGWVQVLYLVLKTLKESGHEHVYSAAEKPLILAQTAAVLEILHGLVGLVRSPITA 76
           N+TV FGW+QVL+LVLKTLKE GH++VYS A+KPL+ AQTAA+LEILHGLVG+VRSPI+A
Sbjct: 17  NFTVLFGWLQVLFLVLKTLKEMGHQNVYSVAQKPLLFAQTAAILEILHGLVGIVRSPISA 76

Query: 77  TLPQISSRLFLVWGILWSFPETRTHXXXXXXXXXXXXTEIIRYLFFGFKEAFGFAPSWLL 136
           TLPQISSRLFLVWGILWSFPET+TH            TEIIRY FFG KEAF F+PSWLL
Sbjct: 77  TLPQISSRLFLVWGILWSFPETQTHFLVSSLLISWSITEIIRYSFFGLKEAFSFSPSWLL 136

Query: 137 WLRYSTFLVL 146
           WLRY   +VL
Sbjct: 137 WLRYEICVVL 146


>Medtr4g060990.1 | tyrosine phosphatase-like protein PTPLB protein |
           HC | chr4:22442171-22439368 | 20130731
          Length = 219

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 21  FFGWVQVLYLVLKTLKESGHEHVYSAAEKPLILAQTAAVLEILHGLVGLVRSPITATLPQ 80
           F   + +LY +L T   +G    Y++A   +   Q AA LE++HG +GLV S     L Q
Sbjct: 22  FVSLINILYNLLSTSSITG---TYASAGTLISFLQCAAFLEVIHGAIGLVPSGALLPLMQ 78

Query: 81  ISSRLFLVWGILWSFPETRTHXXXXXXXXXXXXTEIIRYLFFGFKEAFGFAPSWLLWLRY 140
              R   V  I+    E +               EIIRY  + F    G  PSW+ ++RY
Sbjct: 79  WGGRTHFVLAIVNGIHEVQELPPVFITFLAWSIGEIIRYSHYAF-SCLGNCPSWITYIRY 137

Query: 141 STFLVLYPTGI-SSEVGLIYIVLPFIK 166
           + F+V+YP G+   E+ L+Y  LP IK
Sbjct: 138 TAFIVIYPVGVFPGELWLMYQSLPIIK 164