Miyakogusa Predicted Gene

Lj0g3v0015749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0015749.1 tr|F2D9U8|F2D9U8_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,46.77,3e-18,NOVEL PROTEIN
(FRAGMENT),NULL; TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL; no
description,Tetratrico,NODE_66141_length_1656_cov_7.674517.path1.1
         (431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g082130.1 | hypothetical protein | HC | chr5:35259864-3525...   426   e-119
Medtr3g463450.1 | TPR superfamily protein | HC | chr3:25403273-2...   198   8e-51
Medtr7g099260.1 | TPR repeat protein | HC | chr7:39789340-397912...    93   5e-19
Medtr7g099260.2 | TPR repeat protein | HC | chr7:39789442-397912...    93   5e-19
Medtr7g098450.1 | TPR repeat protein | HC | chr7:39412668-394107...    92   7e-19
Medtr7g098450.2 | TPR repeat protein | HC | chr7:39412635-394103...    92   1e-18
Medtr2g103795.1 | TPR repeat protein | HC | chr2:44688706-446946...    88   1e-17
Medtr4g114690.1 | TPR repeat protein | HC | chr4:47200290-472018...    82   2e-15
Medtr4g010250.1 | TPR repeat protein | HC | chr4:2308253-2305617...    77   5e-14
Medtr2g103795.2 | TPR repeat protein | HC | chr2:44688706-446901...    74   2e-13
Medtr5g029910.1 | TPR repeat protein | HC | chr5:12584803-125828...    74   2e-13
Medtr1g073230.1 | O-linked N-acetylglucosamine transferase, ogt ...    71   2e-12

>Medtr5g082130.1 | hypothetical protein | HC |
           chr5:35259864-35257495 | 20130731
          Length = 416

 Score =  426 bits (1094), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/443 (55%), Positives = 303/443 (68%), Gaps = 43/443 (9%)

Query: 1   MGSRVSPN-------SSYSLCQYSNKSPCPIPSLQLGNGTQSNCGMTCPLIHGSALCRSR 53
           M S VSP        + YSL   S KSP  + SL L N    NC              SR
Sbjct: 1   MASSVSPKLEYWKLRTLYSLPSDSLKSPRSVSSLPLRNKI--NC-----------FSFSR 47

Query: 54  NLRMHIMKQACFAP---YNDEFYHGTKHKEIAHAAVSDIGSSEVKHDVLDPSLLGIQPES 110
           NLR   + ++C      ++D  +H                S+E K ++L+PS LGIQPE 
Sbjct: 48  NLRGKRVNRSCSCSSSLFDDFHFH----------------SNENKREILEPSFLGIQPEP 91

Query: 111 PSWPERDEILRLNFERKVNSVGIPLSIRMIKKKLQWEKGLT-EASEFTSCSVKRVFSSML 169
           PSWPER+EILRL+FERKV SVGIPLSIRMIKKKLQ E+GL  EAS+  +CSVK+ FSSML
Sbjct: 92  PSWPEREEILRLSFERKVKSVGIPLSIRMIKKKLQLEEGLKDEASKLNNCSVKKSFSSML 151

Query: 170 FIIHELQNHVLQTREILCCEDLQGAMAKLQGDLDVSFVWLFQNIFWKSPNLMVNVMVLLA 229
           F++HELQNH LQTRE+LC EDL+  M KL  ++D SFVWLFQ +F ++P LMV+VMV L+
Sbjct: 152 FMLHELQNHALQTRELLCGEDLESVMVKLNREMDDSFVWLFQQVFSETPTLMVDVMVFLS 211

Query: 230 NFSVFSMCDNNVMTNNRNKLLQHSQGESGKQELTEDEEMLWKSMLEEASRWQNELQSEAL 289
           NFS+FSM +NN    N        Q    K+ELTE+EE LW  MLEEAS+ Q EL+ E L
Sbjct: 212 NFSLFSMSNNNSSLMNEVLHGDVVQDVGVKKELTEEEEKLWNFMLEEASKIQRELRGEDL 271

Query: 290 DHETVLKFVAPVSIQLEGDQYEEYVKTRLYYRKHLRQAPYNSLLLSNYAQFLYLVVHDLD 349
           DHET++KF++PVS+++EGDQYEEY KT  YY+KH+  APYNSLLLSNYAQFL+LV+ D D
Sbjct: 272 DHETMMKFLSPVSVEIEGDQYEEYEKTDAYYKKHINLAPYNSLLLSNYAQFLFLVMKDND 331

Query: 350 GAEEYFKRSVLEEPPDAEAFSRYADFLWLVRKDLEAAELRYQEALEEEPRNTYYASKYAN 409
           GAEEY+K+SV+ E P+AEA+ RY DFL  +RKD  AAELRY +ALE +P NTYY SKYA+
Sbjct: 332 GAEEYYKQSVVVESPEAEAYCRYGDFLLWIRKDNWAAELRYLQALEADPGNTYYLSKYAS 391

Query: 410 FLWSTGGK---DTCFPLESPDNF 429
           FLW+TGG+    T FP+E  DN 
Sbjct: 392 FLWNTGGQQENSTSFPIEELDNL 414


>Medtr3g463450.1 | TPR superfamily protein | HC |
           chr3:25403273-25399680 | 20130731
          Length = 513

 Score =  198 bits (504), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 94/155 (60%), Positives = 120/155 (77%), Gaps = 5/155 (3%)

Query: 269 LWKSMLEEASRWQNELQSEALDHETVLKFVAPVSIQLEGDQYEEYVKTRLYYRKHLRQAP 328
           LW+SM+EEA+R  NE   E LDHE + +FV+PVS ++E D Y EY++T L Y+  L Q P
Sbjct: 357 LWESMVEEANR--NE---EGLDHEAMKQFVSPVSAKIESDDYAEYLRTELVYQTGLSQEP 411

Query: 329 YNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWLVRKDLEAAEL 388
            N+LLL+NYAQFLY+V H+ D AEEYFKR++  EPPDAEA+++YA FLW V+ DL AAE 
Sbjct: 412 NNALLLANYAQFLYIVAHEFDRAEEYFKRAIEVEPPDAEAYNKYATFLWKVKNDLWAAEE 471

Query: 389 RYQEALEEEPRNTYYASKYANFLWSTGGKDTCFPL 423
            Y EA+  EP NTYYA+ YA+FLW+TGG+DTCFPL
Sbjct: 472 TYLEAISAEPSNTYYAANYAHFLWNTGGEDTCFPL 506


>Medtr7g099260.1 | TPR repeat protein | HC | chr7:39789340-39791288
           | 20130731
          Length = 363

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 61/96 (63%)

Query: 319 YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWL 378
           YY+K ++Q P N L L NYAQFLY    DL+GAEEY+ R++L +P D E  S+Y   +W 
Sbjct: 240 YYKKMVQQNPGNPLFLRNYAQFLYQCKQDLEGAEEYYSRAILADPNDGEVLSQYGKLVWE 299

Query: 379 VRKDLEAAELRYQEALEEEPRNTYYASKYANFLWST 414
           +  D E A   ++ A++  P +++  + YA+FLW T
Sbjct: 300 LHHDEERASSYFERAVQASPEDSHVQAAYASFLWDT 335


>Medtr7g099260.2 | TPR repeat protein | HC | chr7:39789442-39791288
           | 20130731
          Length = 363

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 61/96 (63%)

Query: 319 YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWL 378
           YY+K ++Q P N L L NYAQFLY    DL+GAEEY+ R++L +P D E  S+Y   +W 
Sbjct: 240 YYKKMVQQNPGNPLFLRNYAQFLYQCKQDLEGAEEYYSRAILADPNDGEVLSQYGKLVWE 299

Query: 379 VRKDLEAAELRYQEALEEEPRNTYYASKYANFLWST 414
           +  D E A   ++ A++  P +++  + YA+FLW T
Sbjct: 300 LHHDEERASSYFERAVQASPEDSHVQAAYASFLWDT 335


>Medtr7g098450.1 | TPR repeat protein | HC | chr7:39412668-39410728
           | 20130731
          Length = 376

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 61/96 (63%)

Query: 319 YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWL 378
           YY+K ++Q P N L L NYAQFLY    D +GAEEY+ R++L +P D E  S+Y   +W 
Sbjct: 252 YYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWE 311

Query: 379 VRKDLEAAELRYQEALEEEPRNTYYASKYANFLWST 414
           + +D E A   ++ A++  P +++  + YA+FLW T
Sbjct: 312 LHRDEERASSYFERAVQASPDDSHVQAAYASFLWDT 347


>Medtr7g098450.2 | TPR repeat protein | HC | chr7:39412635-39410361
           | 20130731
          Length = 353

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 61/96 (63%)

Query: 319 YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWL 378
           YY+K ++Q P N L L NYAQFLY    D +GAEEY+ R++L +P D E  S+Y   +W 
Sbjct: 229 YYKKMVQQNPGNPLFLRNYAQFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWE 288

Query: 379 VRKDLEAAELRYQEALEEEPRNTYYASKYANFLWST 414
           + +D E A   ++ A++  P +++  + YA+FLW T
Sbjct: 289 LHRDEERASSYFERAVQASPDDSHVQAAYASFLWDT 324


>Medtr2g103795.1 | TPR repeat protein | HC | chr2:44688706-44694656
           | 20130731
          Length = 275

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 59/98 (60%)

Query: 315 KTRLYYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYAD 374
           +T  YY+  +   P NSLLL NYA+FL  V  D   AEEY +R++L  P DA+A S YAD
Sbjct: 138 ETDAYYQNMIEANPNNSLLLGNYAKFLKEVRGDYGKAEEYVERAILASPSDADALSLYAD 197

Query: 375 FLWLVRKDLEAAELRYQEALEEEPRNTYYASKYANFLW 412
            +W   K+ + AE  +  A++ +P + Y  + YA FLW
Sbjct: 198 LIWQTEKNADRAEAYFDRAIQSDPNDCYVLASYAKFLW 235


>Medtr4g114690.1 | TPR repeat protein | HC | chr4:47200290-47201853
           | 20130731
          Length = 292

 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 55/106 (51%)

Query: 307 GDQYEEYVKTRLYYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDA 366
           GD       T LYYR  +   P N L L NYA++L  V  D   AEEY  R++L  P D 
Sbjct: 153 GDSNHGNDSTDLYYRTMIEANPGNPLFLGNYAKYLKEVRKDYVKAEEYCGRAILANPNDG 212

Query: 367 EAFSRYADFLWLVRKDLEAAELRYQEALEEEPRNTYYASKYANFLW 412
              S YAD +W   KD   AE  + +A++  P + Y  + YA+FLW
Sbjct: 213 NVLSLYADLIWECHKDAPRAETYFDQAVKAAPDDCYVLASYAHFLW 258


>Medtr4g010250.1 | TPR repeat protein | HC | chr4:2308253-2305617 |
           20130731
          Length = 253

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 2/105 (1%)

Query: 310 YEEYVKTRL--YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAE 367
           + ++ + RL  YY+  +   P ++LLL NY +FL  V  D   AEE  +R++L  P D  
Sbjct: 116 FNDHGRDRLDAYYQNMIEAHPCDALLLGNYGKFLKEVCGDYAKAEECLERAILANPGDGH 175

Query: 368 AFSRYADFLWLVRKDLEAAELRYQEALEEEPRNTYYASKYANFLW 412
             S YAD +W  +K+   A+  + +A++ +P + Y  + YA FLW
Sbjct: 176 VMSIYADLIWETKKNAARAQQYFDQAIQSDPNDCYVLASYAKFLW 220


>Medtr2g103795.2 | TPR repeat protein | HC | chr2:44688706-44690159
           | 20130731
          Length = 224

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 52/86 (60%)

Query: 315 KTRLYYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYAD 374
           +T  YY+  +   P NSLLL NYA+FL  V  D   AEEY +R++L  P DA+A S YAD
Sbjct: 138 ETDAYYQNMIEANPNNSLLLGNYAKFLKEVRGDYGKAEEYVERAILASPSDADALSLYAD 197

Query: 375 FLWLVRKDLEAAELRYQEALEEEPRN 400
            +W   K+ + AE  +  A++ +P +
Sbjct: 198 LIWQTEKNADRAEAYFDRAIQSDPND 223


>Medtr5g029910.1 | TPR repeat protein | HC | chr5:12584803-12582810
           | 20130731
          Length = 253

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 57/94 (60%)

Query: 319 YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWL 378
           YY + L+  P ++LLL NY ++L+ V  ++  AEEY+ R++L  P DAE  S Y   +W 
Sbjct: 125 YYEEMLKSNPADALLLRNYGKYLHEVEKNMVRAEEYYGRAILANPEDAELLSLYGKLIWE 184

Query: 379 VRKDLEAAELRYQEALEEEPRNTYYASKYANFLW 412
           + +D E A+  + +A+  +P ++     YA+F+W
Sbjct: 185 MSRDEERAKSYFDQAIHVDPDDSTVLGSYAHFMW 218


>Medtr1g073230.1 | O-linked N-acetylglucosamine transferase, ogt
           protein, putative | HC | chr1:32490728-32494156 |
           20130731
          Length = 376

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%)

Query: 310 YEEYVKTRLYYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAF 369
           Y E      Y +K + + P N L L  YAQFL+    DL+ AE+Y+ R++  +P D E  
Sbjct: 267 YSEDSNDADYLKKMINENPNNPLFLKKYAQFLFQSNRDLEAAEDYYSRAISADPSDGETI 326

Query: 370 SRYADFLWLVRKDLEAAELRYQEALEEEPRNTYYASKYANFLWSTGGKDT 419
           S YA   W +  D E A   +++A++  P ++   + Y  FLW T  +++
Sbjct: 327 SEYAKLQWQLHHDQEKALSLFEQAVKATPGDSNVLAAYTCFLWETEDEES 376



 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 319 YYRKHLRQAPYNSLLLSNYAQFLYLVVHDLDGAEEYFKRSVLEEPPDAEAFSRYADFLWL 378
           YY+  +   P + L+L  YA FL     +L  AEEYF R+ L +P D E    YA  +W 
Sbjct: 132 YYKIMVHDYPSHPLILKKYAHFLQ-GKGELQDAEEYFHRATLADPNDGEILMHYAKLVWE 190

Query: 379 VRKDLEAAELRYQEALEEEPRNTYYASKYANFLWST 414
              D + A + ++ A +  P+++   + YA+FLW T
Sbjct: 191 NHHDRDRASVYFERAAKASPQDSDVLAAYASFLWET 226