Miyakogusa Predicted Gene

Lj0g3v0014309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0014309.1 Non Characterized Hit- tr|I1L8F1|I1L8F1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1278
PE=,86.99,0,SUBFAMILY NOT NAMED,NULL; ATP-BINDING CASSETTE (ABC)
TRANSPORTER-RELATED,NULL; PH domain-like,NULL;
,NODE_46612_length_1390_cov_150.804321.path1.1
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069765.1 | adaptin ear-binding coat-associated protein 1 ...   444   e-125
Medtr2g091185.1 | adaptin ear-binding coat-associated protein 1 ...   140   1e-33

>Medtr1g069765.1 | adaptin ear-binding coat-associated protein 1 |
           HC | chr1:30432950-30430450 | 20130731
          Length = 279

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/264 (82%), Positives = 232/264 (87%), Gaps = 1/264 (0%)

Query: 1   MSLEEEDESFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWTGRIRVVSRRDRCE 60
           MSLEEE+E F+HTLLVVREV+VYKIPPRTTSGGYKCGEWLQSDKIW+GR+RVVSRRDRCE
Sbjct: 1   MSLEEEEEGFDHTLLVVREVAVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSRRDRCE 60

Query: 61  IRLEDPASGDLFAACFVYPGQREGSVEPVLDSSRYFVLKIEDGQGKHAFIGLGFNERNEA 120
           IRLEDP SGDLFAACFV+PGQREGSVEPVLDSSRYFVLKIEDGQGKHAFIGLGF ERNEA
Sbjct: 61  IRLEDPNSGDLFAACFVFPGQREGSVEPVLDSSRYFVLKIEDGQGKHAFIGLGFAERNEA 120

Query: 121 FDFNVALSDHEKYVRREHDKESGNADAAEDSQIDIHPAVNHRLKEGETIRINVKHKTPGG 180
           FDFNVALSDHEKYVRREHDKESG+ADA+EDSQIDIHPAVNHRLKEGETIRINVKHK  GG
Sbjct: 121 FDFNVALSDHEKYVRREHDKESGDADASEDSQIDIHPAVNHRLKEGETIRINVKHKAAGG 180

Query: 181 TGMLSAAGLTGGHAATPKPKVLSLAXXXXXXXXXXXXXXXXXNDPVAARIVSTTHGSGPK 240
            GMLSAAGL+G H ATPKPKVL+LA                 NDPVAARI ST+  S  K
Sbjct: 181 AGMLSAAGLSGVHVATPKPKVLNLA-PPPGAGKIRSALPLPPNDPVAARIASTSPVSSVK 239

Query: 241 GTHEGVRHSTDALSDLSQLQKNLP 264
           GT EGV+ STD+LSDLSQLQKNLP
Sbjct: 240 GTKEGVKQSTDSLSDLSQLQKNLP 263


>Medtr2g091185.1 | adaptin ear-binding coat-associated protein 1 |
           HC | chr2:39329731-39325602 | 20130731
          Length = 287

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 107/180 (59%), Gaps = 10/180 (5%)

Query: 5   EEDESFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWTGRIRVVSRRDRCEIRLE 64
           E+ E  E  L  V E  VY IPPR ++  Y+  EW  +   W G ++VVS+ + C I+LE
Sbjct: 18  EDTEPIELVLFQVPECYVYIIPPRMSAASYRADEWDVNKWAWEGILKVVSKGEECIIKLE 77

Query: 65  DPASGDLFAACFVYPGQREGSVEPVLDSSRYFVLKIE---DGQGKHAFIGLGFNERNEAF 121
           D  +G+L+A  F+  G+    VE V+DSSRYFVL+IE   DG+ +HAFIG+GF ER EA+
Sbjct: 78  DKNTGELYARAFLRNGEPH-PVEAVIDSSRYFVLRIEENIDGRLRHAFIGIGFRERTEAY 136

Query: 122 DFNVALSDHEKYVRREHDKESGNADAAEDSQIDIHPAVNHRLKEGETIRINVKHKTPGGT 181
           DF  AL DH KY+ ++   E       + S +D      + LKEGET+ + +K+   GG 
Sbjct: 137 DFQAALHDHMKYLDKKKTAEEMEQHYQQSSSVD------YSLKEGETLVLQIKNNRSGGN 190