Miyakogusa Predicted Gene

Lj0g3v0013929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0013929.1 tr|Q6EUF1|Q6EUF1_ORYSJ Os02g0233200 protein
OS=Oryza sativa subsp. japonica GN=OJ1705_E12.36 PE=4
SV,48.94,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,1599_g.1
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g075410.1 | brassinazole-resistant 1 protein | HC | chr2:3...   261   2e-70
Medtr2g075410.2 | brassinazole-resistant 1 protein | HC | chr2:3...   260   3e-70
Medtr2g075400.1 | brassinazole-resistant 1 protein | LC | chr2:3...   232   1e-61

>Medtr2g075410.1 | brassinazole-resistant 1 protein | HC |
           chr2:31541160-31537680 | 20130731
          Length = 323

 Score =  261 bits (666), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 124/146 (84%), Positives = 134/146 (91%)

Query: 2   QADWEDQSTRPGWGGQQYPFLPSSTPPSPGRQVVDPDWFAGIRMPHGGPNSPTFSLVSSN 61
           +ADWEDQSTRPGWGGQQY F PSSTPPSPGRQV+DPDWFAGIRMPH G  SPTFSLV++N
Sbjct: 178 KADWEDQSTRPGWGGQQYSFQPSSTPPSPGRQVLDPDWFAGIRMPHSGQTSPTFSLVATN 237

Query: 62  PFGFKDEVFVGSGSRMWTPGQSGTCSAAIAAGSDHTADIPMAEAVSDEFAFGSSTAGLVK 121
           PFGF++EVF GS SRMWTPGQSGTCS A+AAGSDH ADIPM+EA+SDEFAFGSS  GLVK
Sbjct: 238 PFGFREEVFCGSDSRMWTPGQSGTCSPALAAGSDHNADIPMSEAISDEFAFGSSAVGLVK 297

Query: 122 PWEGERIHEDCGSDDLELTLGSSKTR 147
           PWEGERIHED GSDDLELTLG+SKTR
Sbjct: 298 PWEGERIHEDSGSDDLELTLGTSKTR 323


>Medtr2g075410.2 | brassinazole-resistant 1 protein | HC |
           chr2:31538520-31537680 | 20130731
          Length = 236

 Score =  260 bits (665), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 124/146 (84%), Positives = 134/146 (91%)

Query: 2   QADWEDQSTRPGWGGQQYPFLPSSTPPSPGRQVVDPDWFAGIRMPHGGPNSPTFSLVSSN 61
           +ADWEDQSTRPGWGGQQY F PSSTPPSPGRQV+DPDWFAGIRMPH G  SPTFSLV++N
Sbjct: 91  KADWEDQSTRPGWGGQQYSFQPSSTPPSPGRQVLDPDWFAGIRMPHSGQTSPTFSLVATN 150

Query: 62  PFGFKDEVFVGSGSRMWTPGQSGTCSAAIAAGSDHTADIPMAEAVSDEFAFGSSTAGLVK 121
           PFGF++EVF GS SRMWTPGQSGTCS A+AAGSDH ADIPM+EA+SDEFAFGSS  GLVK
Sbjct: 151 PFGFREEVFCGSDSRMWTPGQSGTCSPALAAGSDHNADIPMSEAISDEFAFGSSAVGLVK 210

Query: 122 PWEGERIHEDCGSDDLELTLGSSKTR 147
           PWEGERIHED GSDDLELTLG+SKTR
Sbjct: 211 PWEGERIHEDSGSDDLELTLGTSKTR 236


>Medtr2g075400.1 | brassinazole-resistant 1 protein | LC |
           chr2:31533809-31529339 | 20130731
          Length = 517

 Score =  232 bits (591), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 107/147 (72%), Positives = 125/147 (85%)

Query: 1   MQADWEDQSTRPGWGGQQYPFLPSSTPPSPGRQVVDPDWFAGIRMPHGGPNSPTFSLVSS 60
           + AD++DQS RPGW GQ Y FLPSS PPSP RQ+VDP+WFAGI++PH  P SPTF+LVS 
Sbjct: 170 LNADFDDQSARPGWTGQHYSFLPSSGPPSPARQIVDPEWFAGIKLPHASPTSPTFNLVSR 229

Query: 61  NPFGFKDEVFVGSGSRMWTPGQSGTCSAAIAAGSDHTADIPMAEAVSDEFAFGSSTAGLV 120
           +PF FK++ F G GSRMWTPGQSG CS AIAAG D TADIPM+EA+SDEFAFGS+T G+V
Sbjct: 230 SPFAFKEDGFSGGGSRMWTPGQSGACSPAIAAGFDQTADIPMSEAISDEFAFGSNTFGIV 289

Query: 121 KPWEGERIHEDCGSDDLELTLGSSKTR 147
           KPWEGERIHE+  +DDLELTLG+SKTR
Sbjct: 290 KPWEGERIHEEFVADDLELTLGNSKTR 316