Miyakogusa Predicted Gene

Lj0g3v0013499.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0013499.1 Non Characterized Hit- tr|I1K3D1|I1K3D1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50115
PE,80.95,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
VERNALIZATION-INSENSITIVE PROTEIN 3,NULL; DUF1423,Protein of
unk,CUFF.954.1
         (623 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086...   298   1e-80
Medtr5g097360.1 | potyviral VPg interacting protein | HC | chr5:...   253   4e-67
Medtr3g045740.1 | DUF1423 family protein | LC | chr3:14990534-14...    87   5e-17

>Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086502 |
            20130731
          Length = 1236

 Score =  298 bits (763), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 204/592 (34%), Positives = 298/592 (50%), Gaps = 76/592 (12%)

Query: 89   SLLNSLTHKGKEVVVS-EVAN--QDGKWVERDFLSLS----ETREDSSKRSLE------- 134
            S++N++  KGK + V+ +VA+  +DG W++R    L+    +  E  S+R  E       
Sbjct: 473  SVINNVKDKGKSISVTPDVAHSSKDGLWIDRGSNDLATCPVDDMEGPSRRGFELFSTSPV 532

Query: 135  -----EDDVERGSNREKKPKMETLNLSLALPDVSLSLTASNALQNIDXXXXXXXPVRTVP 189
                  D +      +    M  L+LSL+LP+V L + A                V+++ 
Sbjct: 533  RKAEKSDSLVLKKENDDSLAMGQLDLSLSLPNVLLPIGAQETATQAPGSPSQARSVQSLS 592

Query: 190  NRPSTTHTSYSNDYTAASLSYSYSHQFSHNPSCSLTRNSTENFEYSMSKD---------- 239
            N    T  + S+ +TA S+S+S S    HNPSCSLT+NS  ++E S+ K           
Sbjct: 593  N----TFCTNSDGFTA-SMSFSGSQSLYHNPSCSLTKNSV-DYEQSVGKSVGSRPLFQGF 646

Query: 240  --DQIWNCGEGTNGSVHS--RFKPVGDGVGFSNHGG-GVLSSFMQGNSQYKTNSSDTHSF 294
                +   G+     V S  R    G+G  +      GVL +  Q      + + +  S 
Sbjct: 647  DWQALSQQGDPKQKEVPSSQRTSMNGNGSLYQPQASWGVLDT--QALKGQHSRALEGSSK 704

Query: 295  FPSELPARPRFEAQ-SGDSR-----------------GRNSENLRVLESLDGGKMRKISR 336
              S L  +  F  Q SG SR                 G N    +  E   GG  R  S+
Sbjct: 705  MGSGLEKQLSFHKQISGQSRRHDDVRSPTQSVGSHDNGSNYSFEKKRERSSGGLHRTTSQ 764

Query: 337  PER---------IVREIVS----ESIPVMALTIPELTDDVIASTKEYLKNLIEKPEKKDE 383
              +          V+ I++    ES+PVM+    E++   +   KE ++ L+   +   +
Sbjct: 765  KGQEQLLMGGLDFVKTIIARIISESVPVMSRKFHEMSGQYMTHMKEGIRELMLNADSHGQ 824

Query: 384  LVSLQNRLERRSDLTKETLTKCSKLQLEILVTVKMGLTSF--LSGKVHLSEMVEIFLYRR 441
            +++ Q  L+ RSD+T + L KC ++QLEILV +K GL  +  L   +  +++ ++FL  +
Sbjct: 825  ILAFQKILQNRSDITLDVLVKCHRVQLEILVAIKTGLAHYLHLGDNISSNDLAQVFLNLK 884

Query: 442  CRNVTCKHLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHAA 501
            CRNV+C+  LPVD+CDCK+C    GFC  CMC VC  FD ASNT SW+GCDVC HWCH  
Sbjct: 885  CRNVSCRSQLPVDECDCKLCVQKNGFCRECMCLVCSKFDNASNTVSWVGCDVCLHWCHTD 944

Query: 502  CGIQRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKEF 561
            CG++ + I+ G S  G  GTTEMQFHCI C H SEMFGFVK+VF   AK+W  E L KE 
Sbjct: 945  CGLRESYIRNGNSTTGTKGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSAEYLYKEL 1004

Query: 562  DYVRRIFRGSEDRKGKELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYADS 613
            +YV+RIF  S+D +G++LH   D ML +L  K   P +    I+ F S  DS
Sbjct: 1005 EYVKRIFSASKDIRGRQLHEIADQMLPRLTIKSNLP-EVLRRIMSFLSDCDS 1055


>Medtr5g097360.1 | potyviral VPg interacting protein | HC |
           chr5:42645832-42649703 | 20130731
          Length = 565

 Score =  253 bits (646), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 177/292 (60%), Gaps = 6/292 (2%)

Query: 327 DGGKMRKISRPERI-VREIVSESIPVMALTIPELTDDVIASTKEYLKNLIEK---PEKKD 382
           D   +R++S  +RI +++I  E + V+   +  L  + +   K  L+ ++E     + +D
Sbjct: 74  DQSVIRRVSSADRISLQDIARERVDVIHEKMLRLPGEFLEELKTGLRVILEGGNGMQHRD 133

Query: 383 ELVSLQNRLERRSDLTKETLTKCSKLQLEILVTVKMGLTSFLSGKVHLSE--MVEIFLYR 440
           E   LQ  ++ RSDLT +TL +  ++QLEILV +  G+  FL   + LS+  ++EIFLY+
Sbjct: 134 EFFILQKLVQSRSDLTAKTLIRAHRVQLEILVAINTGIQGFLHPNISLSQPSLIEIFLYK 193

Query: 441 RCRNVTCKHLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHA 500
           RCRN+ C++ LP DDC C+ C+ N GFC+ CMC +C  FD   NTC WIGCD+CSHW H 
Sbjct: 194 RCRNIACQNQLPADDCSCETCTNNSGFCNLCMCTICSKFDFEVNTCRWIGCDLCSHWTHT 253

Query: 501 ACGIQRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKE 560
            C I+  LI  GP +K  SG +EM F C  C   SE+ G+VKDVF  CA  W  ++LM+E
Sbjct: 254 DCAIREQLICMGPPVKSGSGPSEMVFRCQSCSRTSELLGWVKDVFQHCAPSWDGDSLMRE 313

Query: 561 FDYVRRIFRGSEDRKGKELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYAD 612
            D+V RIF GS+D +G  L +K DD+  KL+++ +    A   I+  F   D
Sbjct: 314 LDFVSRIFHGSKDHRGMNLFWKCDDLKEKLKSRKMEAKAACRAILTVFQELD 365


>Medtr3g045740.1 | DUF1423 family protein | LC |
           chr3:14990534-14992667 | 20130731
          Length = 170

 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 2/84 (2%)

Query: 351 VMALTIPELTDDVIASTKEYLKNLIEKPEKKDELVSLQNRLERRSDLTKETLTKCSKLQL 410
           V+   + E+  +V+AS K+YLKN+IE   KK+ELV+LQNRL+RRSDL+KETL K +K+QL
Sbjct: 58  VLNHIVREIVKEVVASIKKYLKNMIE--NKKEELVNLQNRLKRRSDLSKETLYKGNKVQL 115

Query: 411 EILVTVKMGLTSFLSGKVHLSEMV 434
           E LV V M L+SFL G + LS+ V
Sbjct: 116 ENLVAVNMKLSSFLYGNLQLSKNV 139