Miyakogusa Predicted Gene
- Lj0g3v0013499.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0013499.1 Non Characterized Hit- tr|I1K3D1|I1K3D1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50115
PE,80.95,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
VERNALIZATION-INSENSITIVE PROTEIN 3,NULL; DUF1423,Protein of
unk,CUFF.954.1
(623 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086... 298 1e-80
Medtr5g097360.1 | potyviral VPg interacting protein | HC | chr5:... 253 4e-67
Medtr3g045740.1 | DUF1423 family protein | LC | chr3:14990534-14... 87 5e-17
>Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086502 |
20130731
Length = 1236
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 204/592 (34%), Positives = 298/592 (50%), Gaps = 76/592 (12%)
Query: 89 SLLNSLTHKGKEVVVS-EVAN--QDGKWVERDFLSLS----ETREDSSKRSLE------- 134
S++N++ KGK + V+ +VA+ +DG W++R L+ + E S+R E
Sbjct: 473 SVINNVKDKGKSISVTPDVAHSSKDGLWIDRGSNDLATCPVDDMEGPSRRGFELFSTSPV 532
Query: 135 -----EDDVERGSNREKKPKMETLNLSLALPDVSLSLTASNALQNIDXXXXXXXPVRTVP 189
D + + M L+LSL+LP+V L + A V+++
Sbjct: 533 RKAEKSDSLVLKKENDDSLAMGQLDLSLSLPNVLLPIGAQETATQAPGSPSQARSVQSLS 592
Query: 190 NRPSTTHTSYSNDYTAASLSYSYSHQFSHNPSCSLTRNSTENFEYSMSKD---------- 239
N T + S+ +TA S+S+S S HNPSCSLT+NS ++E S+ K
Sbjct: 593 N----TFCTNSDGFTA-SMSFSGSQSLYHNPSCSLTKNSV-DYEQSVGKSVGSRPLFQGF 646
Query: 240 --DQIWNCGEGTNGSVHS--RFKPVGDGVGFSNHGG-GVLSSFMQGNSQYKTNSSDTHSF 294
+ G+ V S R G+G + GVL + Q + + + S
Sbjct: 647 DWQALSQQGDPKQKEVPSSQRTSMNGNGSLYQPQASWGVLDT--QALKGQHSRALEGSSK 704
Query: 295 FPSELPARPRFEAQ-SGDSR-----------------GRNSENLRVLESLDGGKMRKISR 336
S L + F Q SG SR G N + E GG R S+
Sbjct: 705 MGSGLEKQLSFHKQISGQSRRHDDVRSPTQSVGSHDNGSNYSFEKKRERSSGGLHRTTSQ 764
Query: 337 PER---------IVREIVS----ESIPVMALTIPELTDDVIASTKEYLKNLIEKPEKKDE 383
+ V+ I++ ES+PVM+ E++ + KE ++ L+ + +
Sbjct: 765 KGQEQLLMGGLDFVKTIIARIISESVPVMSRKFHEMSGQYMTHMKEGIRELMLNADSHGQ 824
Query: 384 LVSLQNRLERRSDLTKETLTKCSKLQLEILVTVKMGLTSF--LSGKVHLSEMVEIFLYRR 441
+++ Q L+ RSD+T + L KC ++QLEILV +K GL + L + +++ ++FL +
Sbjct: 825 ILAFQKILQNRSDITLDVLVKCHRVQLEILVAIKTGLAHYLHLGDNISSNDLAQVFLNLK 884
Query: 442 CRNVTCKHLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHAA 501
CRNV+C+ LPVD+CDCK+C GFC CMC VC FD ASNT SW+GCDVC HWCH
Sbjct: 885 CRNVSCRSQLPVDECDCKLCVQKNGFCRECMCLVCSKFDNASNTVSWVGCDVCLHWCHTD 944
Query: 502 CGIQRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKEF 561
CG++ + I+ G S G GTTEMQFHCI C H SEMFGFVK+VF AK+W E L KE
Sbjct: 945 CGLRESYIRNGNSTTGTKGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSAEYLYKEL 1004
Query: 562 DYVRRIFRGSEDRKGKELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYADS 613
+YV+RIF S+D +G++LH D ML +L K P + I+ F S DS
Sbjct: 1005 EYVKRIFSASKDIRGRQLHEIADQMLPRLTIKSNLP-EVLRRIMSFLSDCDS 1055
>Medtr5g097360.1 | potyviral VPg interacting protein | HC |
chr5:42645832-42649703 | 20130731
Length = 565
Score = 253 bits (646), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 177/292 (60%), Gaps = 6/292 (2%)
Query: 327 DGGKMRKISRPERI-VREIVSESIPVMALTIPELTDDVIASTKEYLKNLIEK---PEKKD 382
D +R++S +RI +++I E + V+ + L + + K L+ ++E + +D
Sbjct: 74 DQSVIRRVSSADRISLQDIARERVDVIHEKMLRLPGEFLEELKTGLRVILEGGNGMQHRD 133
Query: 383 ELVSLQNRLERRSDLTKETLTKCSKLQLEILVTVKMGLTSFLSGKVHLSE--MVEIFLYR 440
E LQ ++ RSDLT +TL + ++QLEILV + G+ FL + LS+ ++EIFLY+
Sbjct: 134 EFFILQKLVQSRSDLTAKTLIRAHRVQLEILVAINTGIQGFLHPNISLSQPSLIEIFLYK 193
Query: 441 RCRNVTCKHLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHA 500
RCRN+ C++ LP DDC C+ C+ N GFC+ CMC +C FD NTC WIGCD+CSHW H
Sbjct: 194 RCRNIACQNQLPADDCSCETCTNNSGFCNLCMCTICSKFDFEVNTCRWIGCDLCSHWTHT 253
Query: 501 ACGIQRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKE 560
C I+ LI GP +K SG +EM F C C SE+ G+VKDVF CA W ++LM+E
Sbjct: 254 DCAIREQLICMGPPVKSGSGPSEMVFRCQSCSRTSELLGWVKDVFQHCAPSWDGDSLMRE 313
Query: 561 FDYVRRIFRGSEDRKGKELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYAD 612
D+V RIF GS+D +G L +K DD+ KL+++ + A I+ F D
Sbjct: 314 LDFVSRIFHGSKDHRGMNLFWKCDDLKEKLKSRKMEAKAACRAILTVFQELD 365
>Medtr3g045740.1 | DUF1423 family protein | LC |
chr3:14990534-14992667 | 20130731
Length = 170
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 351 VMALTIPELTDDVIASTKEYLKNLIEKPEKKDELVSLQNRLERRSDLTKETLTKCSKLQL 410
V+ + E+ +V+AS K+YLKN+IE KK+ELV+LQNRL+RRSDL+KETL K +K+QL
Sbjct: 58 VLNHIVREIVKEVVASIKKYLKNMIE--NKKEELVNLQNRLKRRSDLSKETLYKGNKVQL 115
Query: 411 EILVTVKMGLTSFLSGKVHLSEMV 434
E LV V M L+SFL G + LS+ V
Sbjct: 116 ENLVAVNMKLSSFLYGNLQLSKNV 139