Miyakogusa Predicted Gene

Lj0g3v0012389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0012389.1 CUFF.648.1
         (534 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g096940.1 | Pre-mRNA-splicing factor SLU7-like protein | H...   875   0.0  
Medtr1g085510.1 | Pre-mRNA-splicing factor SLU7-like protein | H...   497   e-140
Medtr1g076120.1 | Pre-mRNA-splicing factor SLU7-like protein | L...   177   2e-44

>Medtr7g096940.1 | Pre-mRNA-splicing factor SLU7-like protein | HC |
           chr7:38920000-38925767 | 20130731
          Length = 533

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/532 (80%), Positives = 444/532 (83%)

Query: 1   MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60
           MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
Sbjct: 1   MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADKFRKGACENCGAMTHDAKSCMERPRKAGAKW 120
           SLKHQRKWKSDPNYT SWYDRGAKTFQA K+RKGACENCGAMTH+AK+CMERPRK GAK 
Sbjct: 61  SLKHQRKWKSDPNYTTSWYDRGAKTFQAQKYRKGACENCGAMTHNAKACMERPRKVGAKH 120

Query: 121 TNKHIAPDEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDEARXXXXXXXXXXXXX 180
           T+KHIA DEKVETFELDYDGKRDRWNGYDASTYARVIERYEARD+AR             
Sbjct: 121 TDKHIAADEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDDARKKFLKEQQLKRLE 180

Query: 181 XSDQNGEGSASXXXXXXXXLRVDEAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRIRE 240
             DQN EG+A         LRVDEAKVDESKQMDFAKVEKRVR         VRNLRIRE
Sbjct: 181 KGDQNDEGAAIDEAEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIRE 240

Query: 241 DTAKYLLNLEVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQYRNSGQALEFKELNIHA 300
           DTAKYLLNL+VNSAHYDPKTRSMREDPLP+ADPNEKFYLGDNQYR+SGQALEFK+LNIHA
Sbjct: 241 DTAKYLLNLDVNSAHYDPKTRSMREDPLPEADPNEKFYLGDNQYRSSGQALEFKDLNIHA 300

Query: 301 WEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTILEKYGNAADEDKLPRELLL 360
           WEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTI+EKYGNAADEDKLPRELLL
Sbjct: 301 WEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTIIEKYGNAADEDKLPRELLL 360

Query: 361 GQSEGQVEYDRAGRIIKGQEAAVPRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIR 420
           GQSE QVEYDRAGRI+KGQE A+PRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIR
Sbjct: 361 GQSERQVEYDRAGRIVKGQEVAIPRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIR 420

Query: 421 NSYCTXXXXXXXXXXXNDLMRANIARKEAAAEDAKPMEEKRLATWGTDVPXXXXXXXXXX 480
           NSYCT            DLMRANIARKE+AAED KP+EEKR ATWGTDVP          
Sbjct: 421 NSYCTGAAGIEAAEAAGDLMRANIARKESAAEDPKPIEEKRPATWGTDVPDDVVLDEKLL 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXYNVRWNDEVTAEDMEAYRMKKVHSDDPMKDF 532
                                YNVRWND+VT EDMEAYRMKKVH DDPMK+F
Sbjct: 481 ADALKKEDQRKREEKDERKRKYNVRWNDQVTQEDMEAYRMKKVHHDDPMKNF 532


>Medtr1g085510.1 | Pre-mRNA-splicing factor SLU7-like protein | HC |
           chr1:38191492-38187117 | 20130731
          Length = 387

 Score =  497 bits (1279), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 263/389 (67%), Positives = 288/389 (74%), Gaps = 18/389 (4%)

Query: 7   AFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQR 66
            F+SREDH+KQI+LEEA K+GLAPAE DEDGKEINPHIP+++SS P         LKHQR
Sbjct: 14  TFRSREDHQKQIQLEEACKSGLAPAEFDEDGKEINPHIPRFISSPPC--------LKHQR 65

Query: 67  KWKSDPNYTKSWYDRGAKTFQADKFRKGACENCGAMTHDAKSCMERPRKAGAKWTNKHIA 126
           K  S PN T S   R  KTFQA K+RKGACENCGAMTH AK CMER RK      +K IA
Sbjct: 66  KRISHPNNTSSRSSRVTKTFQASKYRKGACENCGAMTHVAKECMERARK-----VDKSIA 120

Query: 127 PDEKVETFEL---DYDGKRDRWNGYDASTYARVIERYEARDEARXXXXXXXXXXXXXXSD 183
            DEK ETFE    DY+ KRDRW G+D STYARV++ YEARD AR               D
Sbjct: 121 ADEKKETFETAERDYERKRDRWEGFDVSTYARVVKVYEARDHARMKYLKEQKLKKLEKGD 180

Query: 184 QNGEGSASXXXXXXXXLRVDEAKVDESKQMDFAKVEKRVRXXXXXXXXXVRNLRIREDTA 243
           QN EG+A         LR+DEAKVDE KQMDFAKVEKRVR         VRNLRIREDTA
Sbjct: 181 QNDEGAA--IDESEDDLRLDEAKVDEMKQMDFAKVEKRVRTTGGGSRGTVRNLRIREDTA 238

Query: 244 KYLLNLEVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQYRNSGQALEFKELNIHAWEA 303
           KYLLNL+VNSAHYDPKTRSMREDPLP++DPNEKFYLGDN YRNSGQALE KELN +A EA
Sbjct: 239 KYLLNLDVNSAHYDPKTRSMREDPLPESDPNEKFYLGDNHYRNSGQALEVKELNNNAREA 298

Query: 304 FDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTILEKYGNAADEDKLPRELLLGQS 363
           FDKGQDVHM A PSQ ELL+KNFKVMKEK  SQ K TI+EKY   A +D LPRELLLGQS
Sbjct: 299 FDKGQDVHMLAGPSQVELLHKNFKVMKEKSMSQWKKTIIEKYNYVALKDPLPRELLLGQS 358

Query: 364 EGQVEYDRAGRIIKGQEAAVPRSKYEEDV 392
           E Q+ YDRAGRIIKG+EA  PRSK EED+
Sbjct: 359 ERQILYDRAGRIIKGEEALFPRSKDEEDI 387


>Medtr1g076120.1 | Pre-mRNA-splicing factor SLU7-like protein | LC |
           chr1:33719947-33716705 | 20130731
          Length = 188

 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 94/107 (87%)

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADKFRKGACENCGAMTHDAKSCMERPRKAGAKW 120
           SLKHQRKWK D +YTKSW+ +GAK FQADK+RKGA E CGA+TH+AKSCMERP++ GA+W
Sbjct: 11  SLKHQRKWKLDQSYTKSWHHKGAKVFQADKYRKGAYEKCGALTHNAKSCMERPQRIGARW 70

Query: 121 TNKHIAPDEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDEAR 167
           T+KH+APDEK+ETFELDYDG  DR NGY+ +TYA VIER EARDEAR
Sbjct: 71  TSKHVAPDEKIETFELDYDGNLDRSNGYNTATYANVIERCEARDEAR 117