Miyakogusa Predicted Gene

Lj0g3v0011759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0011759.1 Non Characterized Hit- tr|G7JAN8|G7JAN8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.02,0.000000000000007,Myb_DNA-bind_3,Myb/SANT-like
domain,NODE_72594_length_213_cov_93.793427.path1.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g070080.1 | Myb/SANT-like DNA-binding domain protein | HC ...    87   3e-18
Medtr3g070080.2 | Myb/SANT-like DNA-binding domain protein | HC ...    84   2e-17

>Medtr3g070080.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr3:31381549-31384402 | 20130731
          Length = 699

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 48/59 (81%)

Query: 1   MSSTPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKK 59
           MS++P+KA+W PA HK FV++C++E++K NEPG R+ K  W+NIVGSFY KTGV Y KK
Sbjct: 65  MSTSPSKANWNPAFHKIFVELCVKEVLKANEPGMRLTKEAWKNIVGSFYEKTGVEYDKK 123



 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 40/53 (75%)

Query: 7   KASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKK 59
           KASW PA HK FVD+CL E +K N+ G+  +K  W+NI+G FYAKTGVRY K+
Sbjct: 248 KASWTPAYHKIFVDLCLEETLKGNKAGSHFSKEGWKNIMGYFYAKTGVRYDKR 300



 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 2   SSTP-AKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRY 56
           SS P  KA+W P++HK F+D+CL+E +  N+PGT   K  W+NI+ SFY K+G  Y
Sbjct: 440 SSHPKVKANWTPSLHKTFIDLCLQETLNGNKPGTHFTKEGWKNIIDSFYLKSGFNY 495


>Medtr3g070080.2 | Myb/SANT-like DNA-binding domain protein | HC |
          chr3:31380745-31384807 | 20130731
          Length = 636

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/59 (61%), Positives = 48/59 (81%)

Query: 1  MSSTPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKK 59
          MS++P+KA+W PA HK FV++C++E++K NEPG R+ K  W+NIVGSFY KTGV Y KK
Sbjct: 2  MSTSPSKANWNPAFHKIFVELCVKEVLKANEPGMRLTKEAWKNIVGSFYEKTGVEYDKK 60



 Score = 72.4 bits (176), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/58 (56%), Positives = 41/58 (70%)

Query: 2   SSTPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKK 59
           S    KASW PA HK FVD+CL E +K N+ G+  +K  W+NI+G FYAKTGVRY K+
Sbjct: 180 SPPTPKASWTPAYHKIFVDLCLEETLKGNKAGSHFSKEGWKNIMGYFYAKTGVRYDKR 237



 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 2   SSTP-AKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTK 58
           SS P  KA+W P++HK F+D+CL+E +  N+PGT   K  W+NI+ SFY K+G  Y +
Sbjct: 377 SSHPKVKANWTPSLHKTFIDLCLQETLNGNKPGTHFTKEGWKNIIDSFYLKSGFNYGR 434