Miyakogusa Predicted Gene

Lj0g3v0011479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0011479.1 tr|A2Q6E2|A2Q6E2_MEDTR Cryptochrome OS=Medicago
truncatula GN=MTR_5g063920 PE=4 SV=1,94.65,0,crypt_chrom_pln:
cryptochrome, plant family,Cryptochrome, plant; seg,NULL;
Cryptochrome/photolyase
F,NODE_31858_length_1305_cov_194.942535.path1.1
         (365 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g063920.2 | cryptochrome protein | HC | chr5:26511516-2651...   676   0.0  
Medtr5g063920.1 | cryptochrome protein | HC | chr5:26511516-2651...   676   0.0  
Medtr5g063920.4 | cryptochrome protein | HC | chr5:26511516-2651...   676   0.0  
Medtr1g076190.1 | cryptochrome 2B apoprotein | HC | chr1:3375693...   470   e-132
Medtr1g076190.2 | cryptochrome 2B apoprotein | HC | chr1:3375693...   469   e-132
Medtr1g043190.1 | cryptochrome 2B apoprotein | HC | chr1:1616919...   441   e-124
Medtr5g063920.3 | cryptochrome protein | HC | chr5:26511516-2651...   357   8e-99
Medtr4g011370.2 | UVR3 AtUVR3-like 6-4 DNA photolyase | HC | chr...    84   1e-16
Medtr4g011370.1 | UVR3 AtUVR3-like 6-4 DNA photolyase | HC | chr...    84   2e-16
Medtr4g011370.3 | UVR3 AtUVR3-like 6-4 DNA photolyase | HC | chr...    71   1e-12
Medtr3g108700.1 | cryptochrome, DASH family protein | HC | chr3:...    56   6e-08

>Medtr5g063920.2 | cryptochrome protein | HC |
           chr5:26511516-26517722 | 20130731
          Length = 679

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/355 (91%), Positives = 332/355 (93%)

Query: 2   SGGGACSIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGQYYPGRVSRWWLKNSL 61
           S GG CSIVWFRRDLRVEDNP              FIWAPEEEGQYYPGRVSRWWLKNSL
Sbjct: 3   SSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVGVFIWAPEEEGQYYPGRVSRWWLKNSL 62

Query: 62  ATLDSSLRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEVLT 121
           A LDSSLR+LGTPL+TKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKE+LT
Sbjct: 63  AHLDSSLRNLGTPLVTKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEILT 122

Query: 122 AQGITVRSFNSDLLYEPWDVNDANGQPFTTFDAFWERCLTMPYDPQAPLLPPKRIIPGDA 181
           AQGITVRSFNSDLLYEPWDVND NGQPFTTFD+FWERCL+MPYDPQAPLLPPKRIIPGD 
Sbjct: 123 AQGITVRSFNSDLLYEPWDVNDENGQPFTTFDSFWERCLSMPYDPQAPLLPPKRIIPGDV 182

Query: 182 SRCPSDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATT 241
           S+CPSDTLVFED+ EKASNALLARAWSPGWSNA+KALT FINGPLIEYSKNRRKADSATT
Sbjct: 183 SKCPSDTLVFEDDLEKASNALLARAWSPGWSNANKALTTFINGPLIEYSKNRRKADSATT 242

Query: 242 SFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYISFNH 301
           SFLSPHLHFGEVSVKKVFHLVRIKQV WANEGN AGEESVNLFLKSIGLREYSRYISFNH
Sbjct: 243 SFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNEAGEESVNLFLKSIGLREYSRYISFNH 302

Query: 302 PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 356
           PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR
Sbjct: 303 PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 357


>Medtr5g063920.1 | cryptochrome protein | HC |
           chr5:26511516-26517722 | 20130731
          Length = 679

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/355 (91%), Positives = 332/355 (93%)

Query: 2   SGGGACSIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGQYYPGRVSRWWLKNSL 61
           S GG CSIVWFRRDLRVEDNP              FIWAPEEEGQYYPGRVSRWWLKNSL
Sbjct: 3   SSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVGVFIWAPEEEGQYYPGRVSRWWLKNSL 62

Query: 62  ATLDSSLRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEVLT 121
           A LDSSLR+LGTPL+TKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKE+LT
Sbjct: 63  AHLDSSLRNLGTPLVTKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEILT 122

Query: 122 AQGITVRSFNSDLLYEPWDVNDANGQPFTTFDAFWERCLTMPYDPQAPLLPPKRIIPGDA 181
           AQGITVRSFNSDLLYEPWDVND NGQPFTTFD+FWERCL+MPYDPQAPLLPPKRIIPGD 
Sbjct: 123 AQGITVRSFNSDLLYEPWDVNDENGQPFTTFDSFWERCLSMPYDPQAPLLPPKRIIPGDV 182

Query: 182 SRCPSDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATT 241
           S+CPSDTLVFED+ EKASNALLARAWSPGWSNA+KALT FINGPLIEYSKNRRKADSATT
Sbjct: 183 SKCPSDTLVFEDDLEKASNALLARAWSPGWSNANKALTTFINGPLIEYSKNRRKADSATT 242

Query: 242 SFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYISFNH 301
           SFLSPHLHFGEVSVKKVFHLVRIKQV WANEGN AGEESVNLFLKSIGLREYSRYISFNH
Sbjct: 243 SFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNEAGEESVNLFLKSIGLREYSRYISFNH 302

Query: 302 PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 356
           PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR
Sbjct: 303 PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 357


>Medtr5g063920.4 | cryptochrome protein | HC |
           chr5:26511516-26517722 | 20130731
          Length = 679

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/355 (91%), Positives = 332/355 (93%)

Query: 2   SGGGACSIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGQYYPGRVSRWWLKNSL 61
           S GG CSIVWFRRDLRVEDNP              FIWAPEEEGQYYPGRVSRWWLKNSL
Sbjct: 3   SSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVGVFIWAPEEEGQYYPGRVSRWWLKNSL 62

Query: 62  ATLDSSLRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEVLT 121
           A LDSSLR+LGTPL+TKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKE+LT
Sbjct: 63  AHLDSSLRNLGTPLVTKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEILT 122

Query: 122 AQGITVRSFNSDLLYEPWDVNDANGQPFTTFDAFWERCLTMPYDPQAPLLPPKRIIPGDA 181
           AQGITVRSFNSDLLYEPWDVND NGQPFTTFD+FWERCL+MPYDPQAPLLPPKRIIPGD 
Sbjct: 123 AQGITVRSFNSDLLYEPWDVNDENGQPFTTFDSFWERCLSMPYDPQAPLLPPKRIIPGDV 182

Query: 182 SRCPSDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATT 241
           S+CPSDTLVFED+ EKASNALLARAWSPGWSNA+KALT FINGPLIEYSKNRRKADSATT
Sbjct: 183 SKCPSDTLVFEDDLEKASNALLARAWSPGWSNANKALTTFINGPLIEYSKNRRKADSATT 242

Query: 242 SFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYISFNH 301
           SFLSPHLHFGEVSVKKVFHLVRIKQV WANEGN AGEESVNLFLKSIGLREYSRYISFNH
Sbjct: 243 SFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNEAGEESVNLFLKSIGLREYSRYISFNH 302

Query: 302 PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 356
           PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR
Sbjct: 303 PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 357


>Medtr1g076190.1 | cryptochrome 2B apoprotein | HC |
           chr1:33756938-33760848 | 20130731
          Length = 630

 Score =  470 bits (1209), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/360 (61%), Positives = 272/360 (75%), Gaps = 3/360 (0%)

Query: 8   SIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGQYYPGRVSRWWLKNSLATLDSS 67
           +IVWFRRDLR+EDNP              FIW P+EEGQ+YPGRVSRWWLK SL  LD S
Sbjct: 6   TIVWFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLVHLDQS 65

Query: 68  LRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEVLTAQGITV 127
           L+SLG+ L+  R+  ++++LL+ + +  AT++ FNHLYDP+SLVRDH  KE L   G++V
Sbjct: 66  LKSLGSRLVLIRTESTLNALLDCINAIQATKVVFNHLYDPVSLVRDHNIKEKLVELGLSV 125

Query: 128 RSFNSDLLYEPWDVNDANGQPFTTFDAFWERCLTMPYDPQAPLLPPKRIIP--GDASRCP 185
           +S+N DLLYEPW+V D  G  FTTFD FW+RCL    +P   L+PP ++IP  G+  +C 
Sbjct: 126 KSYNGDLLYEPWEVYDEKGHAFTTFDPFWQRCLHKQMEP-VSLIPPWQLIPAEGNVEKCS 184

Query: 186 SDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATTSFLS 245
            + L  E+E EK SNALL RAWSPGWSNADKALT F++  L+ YSKN++K    +TS LS
Sbjct: 185 IEDLGLENELEKPSNALLGRAWSPGWSNADKALTEFMDKQLLHYSKNKQKVGGDSTSLLS 244

Query: 246 PHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYISFNHPYSH 305
           P+LHFGE+SV+KVF + RIKQ+LW NEGN  GEESV LFL++IGLREYSRY+ FN P++H
Sbjct: 245 PYLHFGELSVRKVFQMARIKQILWGNEGNSVGEESVALFLRAIGLREYSRYLCFNFPFTH 304

Query: 306 ERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK 365
           ER LLGHL FFPW  +   FK WRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF VK
Sbjct: 305 ERALLGHLSFFPWNADPSNFKTWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVK 364


>Medtr1g076190.2 | cryptochrome 2B apoprotein | HC |
           chr1:33756938-33760551 | 20130731
          Length = 639

 Score =  469 bits (1208), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/360 (61%), Positives = 272/360 (75%), Gaps = 3/360 (0%)

Query: 8   SIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGQYYPGRVSRWWLKNSLATLDSS 67
           +IVWFRRDLR+EDNP              FIW P+EEGQ+YPGRVSRWWLK SL  LD S
Sbjct: 6   TIVWFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLVHLDQS 65

Query: 68  LRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEVLTAQGITV 127
           L+SLG+ L+  R+  ++++LL+ + +  AT++ FNHLYDP+SLVRDH  KE L   G++V
Sbjct: 66  LKSLGSRLVLIRTESTLNALLDCINAIQATKVVFNHLYDPVSLVRDHNIKEKLVELGLSV 125

Query: 128 RSFNSDLLYEPWDVNDANGQPFTTFDAFWERCLTMPYDPQAPLLPPKRIIP--GDASRCP 185
           +S+N DLLYEPW+V D  G  FTTFD FW+RCL    +P   L+PP ++IP  G+  +C 
Sbjct: 126 KSYNGDLLYEPWEVYDEKGHAFTTFDPFWQRCLHKQMEP-VSLIPPWQLIPAEGNVEKCS 184

Query: 186 SDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATTSFLS 245
            + L  E+E EK SNALL RAWSPGWSNADKALT F++  L+ YSKN++K    +TS LS
Sbjct: 185 IEDLGLENELEKPSNALLGRAWSPGWSNADKALTEFMDKQLLHYSKNKQKVGGDSTSLLS 244

Query: 246 PHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYISFNHPYSH 305
           P+LHFGE+SV+KVF + RIKQ+LW NEGN  GEESV LFL++IGLREYSRY+ FN P++H
Sbjct: 245 PYLHFGELSVRKVFQMARIKQILWGNEGNSVGEESVALFLRAIGLREYSRYLCFNFPFTH 304

Query: 306 ERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK 365
           ER LLGHL FFPW  +   FK WRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF VK
Sbjct: 305 ERALLGHLSFFPWNADPSNFKTWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVK 364


>Medtr1g043190.1 | cryptochrome 2B apoprotein | HC |
           chr1:16169199-16173365 | 20130731
          Length = 600

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/360 (58%), Positives = 261/360 (72%), Gaps = 3/360 (0%)

Query: 8   SIVWFRRDLRVEDNPXXXXXXXXXXXXXXFIWAPEEEGQYYPGRVSRWWLKNSLATLDSS 67
           +IVWFRRDLR+EDNP              FI  P+EEGQ+YPGRVSRWWLK SL  LD S
Sbjct: 4   TIVWFRRDLRIEDNPALAAAARDGSVFPVFICCPKEEGQFYPGRVSRWWLKQSLYHLDQS 63

Query: 68  LRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVRDHRAKEVLTAQGITV 127
           L+SLG  L+  ++  ++ +LLE V +  A ++ FNHLYDP+SLVRDH  KE L   GI+V
Sbjct: 64  LKSLGAGLVMIKTDSTLKALLECVNAVQAKKVVFNHLYDPVSLVRDHNIKEKLVELGISV 123

Query: 128 RSFNSDLLYEPWDVNDANGQPFTTFDAFWERCLTMPYDPQAPLLPPKRIIP--GDASRCP 185
           +S+N DLL+EPWD+ D +G  FTTFD FW RCL M     +  +PP ++IP  G   +  
Sbjct: 124 QSYNGDLLHEPWDIYDESGHAFTTFDPFWSRCLQMQMKTYS-TIPPCQLIPAQGKVEKHS 182

Query: 186 SDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATTSFLS 245
            + L  EDE E +SNALL+RAWSPGWS +DKALT F+   LI YSKNR      +TS LS
Sbjct: 183 IEQLGLEDELETSSNALLSRAWSPGWSKSDKALTEFVENHLIHYSKNRLNLGVDSTSLLS 242

Query: 246 PHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYISFNHPYSH 305
           P++HFGE+SV+KVF LVR KQ+LW NEGNI GEES   FL++IG REYSRY+ F+ P++ 
Sbjct: 243 PYIHFGELSVRKVFQLVRTKQILWKNEGNIVGEESATFFLRAIGFREYSRYLCFSFPFTV 302

Query: 306 ERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK 365
           ERPLLG+LKFFPW  +   FKAWR GRTGYPLVDAGMRELWATGW+H+++RV+VSSF VK
Sbjct: 303 ERPLLGNLKFFPWNTDPSKFKAWRLGRTGYPLVDAGMRELWATGWIHNKMRVIVSSFAVK 362


>Medtr5g063920.3 | cryptochrome protein | HC |
           chr5:26511516-26517722 | 20130731
          Length = 515

 Score =  357 bits (917), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 170/178 (95%), Positives = 173/178 (97%)

Query: 179 GDASRCPSDTLVFEDESEKASNALLARAWSPGWSNADKALTAFINGPLIEYSKNRRKADS 238
           GD S+CPSDTLVFED+ EKASNALLARAWSPGWSNA+KALT FINGPLIEYSKNRRKADS
Sbjct: 16  GDVSKCPSDTLVFEDDLEKASNALLARAWSPGWSNANKALTTFINGPLIEYSKNRRKADS 75

Query: 239 ATTSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGEESVNLFLKSIGLREYSRYIS 298
           ATTSFLSPHLHFGEVSVKKVFHLVRIKQV WANEGN AGEESVNLFLKSIGLREYSRYIS
Sbjct: 76  ATTSFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNEAGEESVNLFLKSIGLREYSRYIS 135

Query: 299 FNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 356
           FNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR
Sbjct: 136 FNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 193


>Medtr4g011370.2 | UVR3 AtUVR3-like 6-4 DNA photolyase | HC |
           chr4:2747766-2742318 | 20130731
          Length = 491

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 165/387 (42%), Gaps = 44/387 (11%)

Query: 5   GACSIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPE----EEGQYYPG-------RV 52
           G+ S++WFR+ +R+ DNP               F+  P     +   + PG       R+
Sbjct: 12  GSGSMIWFRKGIRIHDNPALEYATRGCSNLYPLFVIDPHYMKPDPNAFSPGSSRAGLNRI 71

Query: 53  SRWWLKNSLATLDSSLRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVR 112
           S  +L  SL  LD +L+ +G+ L+  +  D    L+  +K     ++ F +  DP     
Sbjct: 72  S--FLLESLGDLDVNLKKIGSRLLVLKG-DPSEVLIRCLKQWNIGKLCFEYDTDPYYQAL 128

Query: 113 DHRAKEVLTAQGITVRSFNSDLLYEPWDVNDANG-QPFTTFDAFWERCLTMPYDPQAPL- 170
           D + K+     GI V S  S  L+ P D+   NG +P  ++ +F    + +  +P +PL 
Sbjct: 129 DIKVKDYALKAGIEVFSPVSHTLFNPTDIIQKNGGKPPLSYQSF----VNLAGEPPSPLA 184

Query: 171 -----LPPKRII-PGDASRCPS-DTLVFEDESEKASNALLARAWSPGWSNADKALTAFIN 223
                LPP   +   D S  P+   L +ED+  + S       +  G S A + L   + 
Sbjct: 185 TKYSSLPPVGPLGSCDISEVPTIKDLGYEDDQLEFS------PFKGGESEALRRLEECMK 238

Query: 224 GPLIEYSKNRRKADSAT-----TSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGE 278
                 +  + K + +      T+ LSP+L FG +S +  +    I+ V  +   + +  
Sbjct: 239 DKTWVANFEKPKGNPSAFLKPATTILSPYLKFGCLSSRYFYQC--IQDVYKSLPKHTSPP 296

Query: 279 ESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLV 338
            S+   L  +  R++    +F  P           K  PW  ++   +AWR  +TG+P +
Sbjct: 297 VSL---LGQLLWRDFFYTAAFGTPNFDSMKDNRICKQIPWKDDDKLLEAWRDAKTGFPWI 353

Query: 339 DAGMRELWATGWLHDRIRVVVSSFFVK 365
           DA M +L   GW+H   R  V+ F  +
Sbjct: 354 DAIMVQLRQWGWMHHLARHSVACFLTR 380


>Medtr4g011370.1 | UVR3 AtUVR3-like 6-4 DNA photolyase | HC |
           chr4:2747766-2742318 | 20130731
          Length = 542

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 165/387 (42%), Gaps = 44/387 (11%)

Query: 5   GACSIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPE----EEGQYYPG-------RV 52
           G+ S++WFR+ +R+ DNP               F+  P     +   + PG       R+
Sbjct: 12  GSGSMIWFRKGIRIHDNPALEYATRGCSNLYPLFVIDPHYMKPDPNAFSPGSSRAGLNRI 71

Query: 53  SRWWLKNSLATLDSSLRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVR 112
           S  +L  SL  LD +L+ +G+ L+  +  D    L+  +K     ++ F +  DP     
Sbjct: 72  S--FLLESLGDLDVNLKKIGSRLLVLKG-DPSEVLIRCLKQWNIGKLCFEYDTDPYYQAL 128

Query: 113 DHRAKEVLTAQGITVRSFNSDLLYEPWDVNDANG-QPFTTFDAFWERCLTMPYDPQAPL- 170
           D + K+     GI V S  S  L+ P D+   NG +P  ++ +F    + +  +P +PL 
Sbjct: 129 DIKVKDYALKAGIEVFSPVSHTLFNPTDIIQKNGGKPPLSYQSF----VNLAGEPPSPLA 184

Query: 171 -----LPPKRII-PGDASRCPS-DTLVFEDESEKASNALLARAWSPGWSNADKALTAFIN 223
                LPP   +   D S  P+   L +ED+  + S       +  G S A + L   + 
Sbjct: 185 TKYSSLPPVGPLGSCDISEVPTIKDLGYEDDQLEFS------PFKGGESEALRRLEECMK 238

Query: 224 GPLIEYSKNRRKADSAT-----TSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGE 278
                 +  + K + +      T+ LSP+L FG +S +  +    I+ V  +   + +  
Sbjct: 239 DKTWVANFEKPKGNPSAFLKPATTILSPYLKFGCLSSRYFYQC--IQDVYKSLPKHTSPP 296

Query: 279 ESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLV 338
            S+   L  +  R++    +F  P           K  PW  ++   +AWR  +TG+P +
Sbjct: 297 VSL---LGQLLWRDFFYTAAFGTPNFDSMKDNRICKQIPWKDDDKLLEAWRDAKTGFPWI 353

Query: 339 DAGMRELWATGWLHDRIRVVVSSFFVK 365
           DA M +L   GW+H   R  V+ F  +
Sbjct: 354 DAIMVQLRQWGWMHHLARHSVACFLTR 380


>Medtr4g011370.3 | UVR3 AtUVR3-like 6-4 DNA photolyase | HC |
           chr4:2747766-2742318 | 20130731
          Length = 518

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 157/373 (42%), Gaps = 46/373 (12%)

Query: 5   GACSIVWFRRDLRVEDNPXXXXXXXXXXXXX-XFIWAPE----EEGQYYPG-------RV 52
           G+ S++WFR+ +R+ DNP               F+  P     +   + PG       R+
Sbjct: 12  GSGSMIWFRKGIRIHDNPALEYATRGCSNLYPLFVIDPHYMKPDPNAFSPGSSRAGLNRI 71

Query: 53  SRWWLKNSLATLDSSLRSLGTPLITKRSTDSVSSLLEVVKSTGATQIFFNHLYDPLSLVR 112
           S  +L  SL  LD +L+ +G+ L+  +  D    L+  +K     ++ F +  DP     
Sbjct: 72  S--FLLESLGDLDVNLKKIGSRLLVLKG-DPSEVLIRCLKQWNIGKLCFEYDTDPYYQAL 128

Query: 113 DHRAKEVLTAQGITVRSFNSDLLYEPWDVNDANG-QPFTTFDAFWERCLTMPYDPQAPL- 170
           D + K+     GI V S  S  L+ P D+   NG +P  ++ +F    + +  +P +PL 
Sbjct: 129 DIKVKDYALKAGIEVFSPVSHTLFNPTDIIQKNGGKPPLSYQSF----VNLAGEPPSPLA 184

Query: 171 -----LPPKRIIPG-DASRCPS-DTLVFEDESEKASNALLARAWSPGWSNADKALTAFIN 223
                LPP   +   D S  P+   L +ED+  + S       +  G S A + L   + 
Sbjct: 185 TKYSSLPPVGPLGSCDISEVPTIKDLGYEDDQLEFS------PFKGGESEALRRLEECMK 238

Query: 224 GPLIEYSKNRRKADSAT-----TSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNIAGE 278
                 +  + K + +      T+ LSP+L FG +S +  +    I+ V  +   + +  
Sbjct: 239 DKTWVANFEKPKGNPSAFLKPATTILSPYLKFGCLSSRYFYQC--IQDVYKSLPKHTSPP 296

Query: 279 ESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLV 338
            S+   L  +  R++    +F  P           K  PW  ++   +AWR  +TG+P +
Sbjct: 297 VSL---LGQLLWRDFFYTAAFGTPNFDSMKDNRICKQIPWKDDDKLLEAWRDAKTGFPWI 353

Query: 339 DAGMREL--WATG 349
           DA M +   W  G
Sbjct: 354 DAIMVQFVHWEKG 366


>Medtr3g108700.1 | cryptochrome, DASH family protein | HC |
           chr3:50213300-50207366 | 20130731
          Length = 595

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 34/48 (70%)

Query: 318 WVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK 365
           W  ++  F++WR G TGYPL+DA M+EL  TG++ +R R +V SF V+
Sbjct: 426 WSQDKKLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVR 473