Miyakogusa Predicted Gene

Lj0g3v0011389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0011389.1 Non Characterized Hit- tr|G8DCW7|G8DCW7_PHAVU
Putative methyltransferase OS=Phaseolus vulgaris PE=4
,47.37,0.00000002,seg,NULL,
NODE_81435_length_1240_cov_10.120968.path1.1
         (84 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076170.1 | methyltransferase | HC | chr7:28642120-2863695...    59   1e-09

>Medtr7g076170.1 | methyltransferase | HC | chr7:28642120-28636952
          | 20130731
          Length = 638

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/39 (61%), Positives = 32/39 (82%), Gaps = 1/39 (2%)

Query: 25 KKPNKPLTRLYYITFTTILCALFYLIGLWRH-PTTTAAA 62
          KKPNKP +R+Y++TFT  LC  FY +GLW++ PTTT+AA
Sbjct: 11 KKPNKPFSRIYFLTFTIFLCTFFYFLGLWQNSPTTTSAA 49