Miyakogusa Predicted Gene

Lj0g3v0010119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0010119.1 Non Characterized Hit- tr|I1N861|I1N861_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65.22,0.000001,
,gene.g903.t1.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130830.1 | DNase I superfamily protein | HC | chr4:545223...   276   4e-75

>Medtr4g130830.1 | DNase I superfamily protein | HC |
           chr4:54522347-54521099 | 20130731
          Length = 167

 Score =  276 bits (707), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 134/153 (87%), Positives = 138/153 (90%), Gaps = 2/153 (1%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           MDE S RARRRSALLTWQHIASLPPSLPVVYCG FNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 1   MDELSARARRRSALLTWQHIASLPPSLPVVYCGVFNTQKESTTGRFLLGRSREHGVVGDM 60

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNVSLIRTYHGFKG+KQGT+EYLKLIFRALCLCWDRQTQDLH+DWI FRG
Sbjct: 61  RDAWPSARVRKNVSLIRTYHGFKGDKQGTVEYLKLIFRALCLCWDRQTQDLHVDWILFRG 120

Query: 121 RSLIPVSCEVVNDNIDGT--PKHKTIIPHFMHP 151
           RSLIPVSCEVVNDNIDG     H  I   FM P
Sbjct: 121 RSLIPVSCEVVNDNIDGCYPSSHFPIFSEFMLP 153