Miyakogusa Predicted Gene

Lj0g3v0010099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0010099.1 Non Characterized Hit- tr|E0CVB7|E0CVB7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,54.88,3e-17,
,gene.g899.t1.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g077160.1 | transducin/WD40 repeat protein | HC | chr5:329...   141   5e-34
Medtr1g059090.1 | transducin/WD40 repeat protein | HC | chr1:217...   133   9e-32
Medtr1g059090.2 | transducin/WD40 repeat protein | HC | chr1:217...   129   2e-30

>Medtr5g077160.1 | transducin/WD40 repeat protein | HC |
           chr5:32928457-32919680 | 20130731
          Length = 849

 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 72/85 (84%)

Query: 80  PSQPGCWYPVGLAQMEKWIALDQEHVREQVKFIASNVTHEKRFVTCGYSAVEPCSYCSAS 139
           P+QPG WYPVGLAQMEKW+AL+QEHVR+Q+KFI S VTHEKRFVT   S VE CSYCSA 
Sbjct: 683 PAQPGRWYPVGLAQMEKWVALNQEHVRDQLKFIVSKVTHEKRFVTKRCSTVESCSYCSAP 742

Query: 140 VLFESPEFGFCQGENCSSGNVKRHR 164
           V F+SPEFGFCQ E C+ GNVKRH+
Sbjct: 743 VPFDSPEFGFCQSEKCTGGNVKRHK 767


>Medtr1g059090.1 | transducin/WD40 repeat protein | HC |
           chr1:21763914-21774360 | 20130731
          Length = 851

 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/91 (69%), Positives = 73/91 (80%)

Query: 74  FEGWSTPSQPGCWYPVGLAQMEKWIALDQEHVREQVKFIASNVTHEKRFVTCGYSAVEPC 133
           F   +TPS PG WYPVGLAQME+W+AL+QE + +Q+K IAS VTHEKRFV    SA+E C
Sbjct: 680 FNQEATPSLPGRWYPVGLAQMEQWVALNQEDIHDQLKSIASKVTHEKRFVPKKCSAMESC 739

Query: 134 SYCSASVLFESPEFGFCQGENCSSGNVKRHR 164
           +YCSA V FESPEFGFCQ ENCSSGNVKR +
Sbjct: 740 NYCSAPVPFESPEFGFCQSENCSSGNVKRRK 770


>Medtr1g059090.2 | transducin/WD40 repeat protein | HC |
           chr1:21763923-21774315 | 20130731
          Length = 852

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/92 (68%), Positives = 73/92 (79%), Gaps = 1/92 (1%)

Query: 74  FEGWSTPSQPGCWYPVGLAQMEKWIALDQEHVREQVKFIASNVTHEK-RFVTCGYSAVEP 132
           F   +TPS PG WYPVGLAQME+W+AL+QE + +Q+K IAS VTHEK RFV    SA+E 
Sbjct: 680 FNQEATPSLPGRWYPVGLAQMEQWVALNQEDIHDQLKSIASKVTHEKSRFVPKKCSAMES 739

Query: 133 CSYCSASVLFESPEFGFCQGENCSSGNVKRHR 164
           C+YCSA V FESPEFGFCQ ENCSSGNVKR +
Sbjct: 740 CNYCSAPVPFESPEFGFCQSENCSSGNVKRRK 771