Miyakogusa Predicted Gene

Lj0g3v0009729.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0009729.1 Non Characterized Hit- tr|G7IW60|G7IW60_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,35.79,0.0003,
,CUFF.549.1
         (158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g020500.1 | hypothetical protein | LC | chr3:5921648-59209...    49   1e-06

>Medtr3g020500.1 | hypothetical protein | LC | chr3:5921648-5920914
           | 20130731
          Length = 244

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 14/95 (14%)

Query: 60  HRESSGSFWFR--FPAVTLMFEGMSDLCIDIYRVVIDFRFWVFLHAFGQFPFSCMYIIPA 117
           H +SS  FWFR  FP + L  +      +D   +V+DF+F V ++       SC+YI  A
Sbjct: 90  HNKSSVCFWFRKKFPEIALWCDVRPQKHLD--NMVLDFKFNVLVNGTKHLTSSCVYIFYA 147

Query: 118 KKGTVYLLHLHVDAADLQYKFEHGVGEGVFSEHEW 152
           ++ T  +L       DLQ +      EGVFSE+EW
Sbjct: 148 ERETGQIL-----CCDLQCRV-----EGVFSENEW 172