Miyakogusa Predicted Gene

Lj0g3v0009329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0009329.1 Non Characterized Hit- tr|B9RHA6|B9RHA6_RICCO
Vacuolar proton atpase, putative OS=Ricinus communis
G,55.71,0.000000000000002,V_ATPase_I,ATPase, V0/A0 complex subunit a;
coiled-coil,NULL; VACUOLAR PROTON ATPASE,NULL; VACUOLAR
,gene.g823.t1.1
         (422 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g093210.1 | vacuolar proton ATPase a3-like protein | HC | ...   333   2e-91
Medtr2g093210.2 | vacuolar proton ATPase a3-like protein | HC | ...   333   2e-91
Medtr2g093210.4 | vacuolar proton ATPase a3-like protein | HC | ...   333   2e-91
Medtr4g061090.1 | vacuolar proton ATPase a3-like protein | HC | ...   294   1e-79
Medtr2g093210.3 | vacuolar proton ATPase a3-like protein | HC | ...   238   8e-63
Medtr4g071070.1 | vacuolar proton ATPase a3-like protein | HC | ...   190   3e-48
Medtr3g112500.1 | vacuolar proton ATPase a3-like protein | HC | ...   183   2e-46
Medtr2g438500.1 | vacuolar proton ATPase a1 | HC | chr2:15553190...    84   4e-16

>Medtr2g093210.1 | vacuolar proton ATPase a3-like protein | HC |
           chr2:39725783-39712695 | 20130731
          Length = 818

 Score =  333 bits (855), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/178 (89%), Positives = 172/178 (96%)

Query: 1   MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
           M++FIDNLPPMDLMRSEKMTFVQLIIPAESAHRA+SYLGELGLLQFRDLNA+KSPFQRTF
Sbjct: 1   MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQFRDLNADKSPFQRTF 60

Query: 61  VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
           VNQVKRCAEMSRKLRFFKDQ+NKAGL+SS+R +LQ DIDLEDLEV LAEHEHELIEMNSN
Sbjct: 61  VNQVKRCAEMSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSN 120

Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
           SDKLRQSYNELLEFKIVLQKACGFL+SS+G AVS E ELQ+N+YSNDDY+ETASLLEQ
Sbjct: 121 SDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSGEIELQDNVYSNDDYIETASLLEQ 178



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 66/70 (94%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           EQARTKILKICEAFGANCYPVPEDISK  QITREV+SRLTDLEATLDAGIRHRNKAL+SI
Sbjct: 248 EQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALSSI 307

Query: 237 TDHLANWMNM 246
            DHLA WM++
Sbjct: 308 ADHLAKWMDL 317


>Medtr2g093210.2 | vacuolar proton ATPase a3-like protein | HC |
           chr2:39725774-39712695 | 20130731
          Length = 685

 Score =  333 bits (855), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/178 (89%), Positives = 172/178 (96%)

Query: 1   MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
           M++FIDNLPPMDLMRSEKMTFVQLIIPAESAHRA+SYLGELGLLQFRDLNA+KSPFQRTF
Sbjct: 1   MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQFRDLNADKSPFQRTF 60

Query: 61  VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
           VNQVKRCAEMSRKLRFFKDQ+NKAGL+SS+R +LQ DIDLEDLEV LAEHEHELIEMNSN
Sbjct: 61  VNQVKRCAEMSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSN 120

Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
           SDKLRQSYNELLEFKIVLQKACGFL+SS+G AVS E ELQ+N+YSNDDY+ETASLLEQ
Sbjct: 121 SDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSGEIELQDNVYSNDDYIETASLLEQ 178



 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 66/70 (94%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           EQARTKILKICEAFGANCYPVPEDISK  QITREV+SRLTDLEATLDAGIRHRNKAL+SI
Sbjct: 248 EQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALSSI 307

Query: 237 TDHLANWMNM 246
            DHLA WM++
Sbjct: 308 ADHLAKWMDL 317


>Medtr2g093210.4 | vacuolar proton ATPase a3-like protein | HC |
           chr2:39725774-39717464 | 20130731
          Length = 517

 Score =  333 bits (855), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/178 (89%), Positives = 172/178 (96%)

Query: 1   MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
           M++FIDNLPPMDLMRSEKMTFVQLIIPAESAHRA+SYLGELGLLQFRDLNA+KSPFQRTF
Sbjct: 1   MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQFRDLNADKSPFQRTF 60

Query: 61  VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
           VNQVKRCAEMSRKLRFFKDQ+NKAGL+SS+R +LQ DIDLEDLEV LAEHEHELIEMNSN
Sbjct: 61  VNQVKRCAEMSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLAEHEHELIEMNSN 120

Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
           SDKLRQSYNELLEFKIVLQKACGFL+SS+G AVS E ELQ+N+YSNDDY+ETASLLEQ
Sbjct: 121 SDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSGEIELQDNVYSNDDYIETASLLEQ 178



 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 66/70 (94%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           EQARTKILKICEAFGANCYPVPEDISK  QITREV+SRLTDLEATLDAGIRHRNKAL+SI
Sbjct: 248 EQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALSSI 307

Query: 237 TDHLANWMNM 246
            DHLA WM++
Sbjct: 308 ADHLAKWMDL 317


>Medtr4g061090.1 | vacuolar proton ATPase a3-like protein | HC |
           chr4:22542875-22554753 | 20130731
          Length = 820

 Score =  294 bits (752), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 142/178 (79%), Positives = 160/178 (89%), Gaps = 1/178 (0%)

Query: 1   MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
           MD F + LP MDLMRSEKMTFVQ+IIPAESAHR I+YLG+LGLLQFRDLNAEKSPFQRTF
Sbjct: 1   MDHFTEKLPSMDLMRSEKMTFVQIIIPAESAHRIITYLGQLGLLQFRDLNAEKSPFQRTF 60

Query: 61  VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
           VNQVKRCAEMSRKLRF  DQ+NKAG++SS   VLQ D +LED+E QLAEHEHE+IEMNSN
Sbjct: 61  VNQVKRCAEMSRKLRFLMDQVNKAGIMSSHS-VLQSDTNLEDIETQLAEHEHEIIEMNSN 119

Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
           S+KL+QSYNELLEFKIVLQKAC FLVSS+GHA+S+EREL EN+YSN+D+VET  L EQ
Sbjct: 120 SEKLQQSYNELLEFKIVLQKACNFLVSSHGHALSEERELVENVYSNEDFVETPFLFEQ 177



 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 63/70 (90%), Positives = 66/70 (94%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRL DLEATLDAGIRHRNKAL+S+
Sbjct: 250 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLADLEATLDAGIRHRNKALSSV 309

Query: 237 TDHLANWMNM 246
             HLA WM+M
Sbjct: 310 GGHLAKWMDM 319


>Medtr2g093210.3 | vacuolar proton ATPase a3-like protein | HC |
           chr2:39725774-39712695 | 20130731
          Length = 778

 Score =  238 bits (607), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 114/130 (87%), Positives = 124/130 (95%)

Query: 49  LNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLA 108
           LNA+KSPFQRTFVNQVKRCAEMSRKLRFFKDQ+NKAGL+SS+R +LQ DIDLEDLEV LA
Sbjct: 9   LNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQVNKAGLMSSSRTLLQPDIDLEDLEVHLA 68

Query: 109 EHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDD 168
           EHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFL+SS+G AVS E ELQ+N+YSNDD
Sbjct: 69  EHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLISSHGRAVSGEIELQDNVYSNDD 128

Query: 169 YVETASLLEQ 178
           Y+ETASLLEQ
Sbjct: 129 YIETASLLEQ 138



 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 66/70 (94%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           EQARTKILKICEAFGANCYPVPEDISK  QITREV+SRLTDLEATLDAGIRHRNKAL+SI
Sbjct: 208 EQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALSSI 267

Query: 237 TDHLANWMNM 246
            DHLA WM++
Sbjct: 268 ADHLAKWMDL 277


>Medtr4g071070.1 | vacuolar proton ATPase a3-like protein | HC |
           chr4:26777805-26767130 | 20130731
          Length = 822

 Score =  190 bits (482), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/152 (57%), Positives = 118/152 (77%), Gaps = 1/152 (0%)

Query: 9   PPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCA 68
           PPMDL RSE M  +QLIIP ESAH  +SYLG+LGLLQF+DLN+EKSPFQRT+  Q+KRC 
Sbjct: 12  PPMDLFRSEPMQLIQLIIPMESAHCTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKRCG 71

Query: 69  EMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSY 128
           EM+RKLRFFK+Q+ KAG +S      Q D++++D+E++L E E EL EMN+N +KL+++Y
Sbjct: 72  EMARKLRFFKEQMFKAG-VSPKGSTTQSDVNIDDIEIKLTEIESELTEMNANGEKLQRTY 130

Query: 129 NELLEFKIVLQKACGFLVSSNGHAVSDERELQ 160
           NEL+E+K+VLQKA  F  S+   A+  +RE +
Sbjct: 131 NELVEYKLVLQKAGDFFHSAQSRAIEQQREYE 162



 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 44/67 (65%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           E+ + KILKIC+AFGAN YP  E++ KQ Q+  EVS +L +L+ T+DAG+ HR   L +I
Sbjct: 250 EKVKAKILKICDAFGANRYPFAEELGKQAQMISEVSGKLAELKTTIDAGLSHRVNLLENI 309

Query: 237 TDHLANW 243
                 W
Sbjct: 310 GTQFEQW 316


>Medtr3g112500.1 | vacuolar proton ATPase a3-like protein | HC |
           chr3:52762184-52758139 | 20130731
          Length = 722

 Score =  183 bits (465), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/171 (55%), Positives = 124/171 (72%)

Query: 11  MDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEM 70
           MDL+RSE M  VQLIIP ESA R+ISYLG+LGL QF+DLN +KSPFQ+T+ +QVKRC EM
Sbjct: 1   MDLLRSEPMQLVQLIIPIESAQRSISYLGDLGLFQFKDLNEDKSPFQQTYASQVKRCGEM 60

Query: 71  SRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSYNE 130
           SRKLR FK+Q+ KA +  ST       IDLE LEV+LAE E ELIE+NSN++KL+ +YNE
Sbjct: 61  SRKLRLFKEQMKKANISPSTWSTRDGSIDLEKLEVKLAELEAELIEINSNNEKLQHTYNE 120

Query: 131 LLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQART 181
           L+E+K+VL+K   F  S+   A + +REL+    S +  ++   L+EQ  T
Sbjct: 121 LIEYKLVLEKVGEFFSSAQISAATRQRELEVQQPSVEGSIDCPLLMEQETT 171



 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 45/67 (67%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           E+ ++KI KIC+AFGAN YP  +D+SKQ ++  EVS R+ +L+ T+D G+ HR+  L +I
Sbjct: 239 ERVKSKINKICDAFGANRYPFSDDLSKQFEMMTEVSERVVELKTTIDVGLLHRSNLLQTI 298

Query: 237 TDHLANW 243
                 W
Sbjct: 299 GYKFEQW 305


>Medtr2g438500.1 | vacuolar proton ATPase a1 | HC |
          chr2:15553190-15552996 | 20130731
          Length = 64

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 46/55 (83%)

Query: 1  MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSP 55
          M++FIDNLP MDL+RSEKM FVQLIIPAESA RA SYLGEL LLQ RD+++   P
Sbjct: 1  MEKFIDNLPLMDLIRSEKMMFVQLIIPAESAQRADSYLGELSLLQLRDVSSISDP 55