Miyakogusa Predicted Gene

Lj0g3v0008879.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0008879.4 Non Characterized Hit- tr|I1M1G8|I1M1G8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,67.19,0.00000000000001, ,CUFF.522.4
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g019140.1 | protease Do-like protein | HC | chr2:6181839-6...    54   3e-08
Medtr2g019140.2 | protease Do-like protein | HC | chr2:6181836-6...    54   4e-08

>Medtr2g019140.1 | protease Do-like protein | HC |
           chr2:6181839-6175380 | 20130731
          Length = 325

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 45  VFLADTKGNSFYREGKAIEFDPAYDLAVLKV 75
           VFL D KGN+F REGK I FDP+YDLAVLKV
Sbjct: 166 VFLVDAKGNNFSREGKIIGFDPSYDLAVLKV 196


>Medtr2g019140.2 | protease Do-like protein | HC |
           chr2:6181836-6175380 | 20130731
          Length = 247

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 45  VFLADTKGNSFYREGKAIEFDPAYDLAVLKV 75
           VFL D KGN+F REGK I FDP+YDLAVLKV
Sbjct: 166 VFLVDAKGNNFSREGKIIGFDPSYDLAVLKV 196