Miyakogusa Predicted Gene
- Lj0g3v0008069.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0008069.1 Non Characterized Hit- tr|K4BX01|K4BX01_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,75.95,0,seg,NULL; DUF3326,Protein of unknown function
DUF3326,CUFF.471.1
(374 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g030640.1 | DUF3326 family protein | HC | chr1:10659114-10... 648 0.0
>Medtr1g030640.1 | DUF3326 family protein | HC |
chr1:10659114-10664114 | 20130731
Length = 407
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/373 (83%), Positives = 337/373 (90%)
Query: 1 MQCKREYTSVMIVPTXXXXXXXXXXXXXLPVARALSSVVDCLITHPNVLNAAMLYWPMPN 60
++CKR+YTSVMIVPT LPVARALSSVVDCLITHPNVLNAAMLYWPMPN
Sbjct: 34 LKCKRDYTSVMIVPTGTGAAIGGFAGDALPVARALSSVVDCLITHPNVLNAAMLYWPMPN 93
Query: 61 ALYVEGYALDRFAEGLWALQPVHQNRVGLVLDAGIEQELQVRQLQVADAARASLGLPVVE 120
ALYVEGYALDRFAEG WALQPVHQNRVG+VLDAGIE+EL++RQLQVADAARASLGLPVVE
Sbjct: 94 ALYVEGYALDRFAEGSWALQPVHQNRVGIVLDAGIEEELRIRQLQVADAARASLGLPVVE 153
Query: 121 YIVTDTPLKVEKWVDPETGQSTGRIKHPDSLLRAVQTLMNRSKVNAIAVVGRFPXXXXXX 180
Y VTDTPL+VEKW+DP+TG+STGRIKHPDSLLRAVQTL+NRSKVNA+AVVGRFP
Sbjct: 154 YTVTDTPLEVEKWIDPKTGKSTGRIKHPDSLLRAVQTLVNRSKVNAVAVVGRFPDDDTDD 213
Query: 181 XXXYRQGMGIDLLAGVEAVISHLVVKEFQIPCAHAPALAPLTMSLSLSPKSAAEEIGYTF 240
YRQG+G+DLLAGVEAVISHLVVKEFQIPCAHAPA+AP+ +SLSLSPKSAAEEIGYTF
Sbjct: 214 VDEYRQGLGVDLLAGVEAVISHLVVKEFQIPCAHAPAMAPIPLSLSLSPKSAAEEIGYTF 273
Query: 241 LPCVLAGLSNAPQYMVMHSESTDKGCIVARDVDSLILPKDACGGAGTLAFARNGKNKPLI 300
LPCVLAGLS APQY+VMHSES +KGCI+A +VDS++LPKDACGG GTLAFARN KNKPLI
Sbjct: 274 LPCVLAGLSKAPQYLVMHSESMEKGCILASEVDSIVLPKDACGGEGTLAFARNAKNKPLI 333
Query: 301 IAVEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDPYSLRRNKILNIGCTPCM 360
I VEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDP+SLRRNKI NIG T M
Sbjct: 334 ITVEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDPFSLRRNKIHNIGSTSFM 393
Query: 361 PVNGHSISRERAI 373
PVNGHS +RERA+
Sbjct: 394 PVNGHSNTRERAV 406