Miyakogusa Predicted Gene

Lj0g3v0005999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005999.1 Non Characterized Hit- tr|I1GRT8|I1GRT8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,46.46,8e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.353.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g088860.2 | Cyclin 4 | HC | chr5:38592817-38587725 | 20130731   169   5e-43
Medtr5g088860.3 | Cyclin 4 | HC | chr5:38592999-38587723 | 20130731   169   5e-43
Medtr5g088860.1 | Cyclin 4 | HC | chr5:38592337-38588120 | 20130731   169   5e-43
Medtr3g045180.1 | Cyclin 4 | HC | chr3:14610141-14617178 | 20130731   150   3e-37
Medtr7g089090.3 | myosin heavy chain-like protein | HC | chr7:34...   102   6e-23
Medtr7g089090.2 | myosin heavy chain-like protein | HC | chr7:34...   102   6e-23
Medtr7g089090.1 | myosin heavy chain-like protein | HC | chr7:34...   102   6e-23

>Medtr5g088860.2 | Cyclin 4 | HC | chr5:38592817-38587725 | 20130731
          Length = 494

 Score =  169 bits (428), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 93/124 (75%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIMETKGDPKVLTMKEVVAR 60
           MTR+TRDF DTMQ+EA+P VS+DV+FA+ RFPNY+IGANNQIME K DPKVL+MKEV+AR
Sbjct: 1   MTRVTRDFGDTMQKEAVPAVSSDVVFATSRFPNYRIGANNQIMEAKDDPKVLSMKEVIAR 60

Query: 61  ETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECLK 120
           ETA LL+Q  RLSVRDLASKFEKG                     HVLLKKLRD+LE LK
Sbjct: 61  ETAMLLDQHNRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLK 120

Query: 121 GRVG 124
           GRV 
Sbjct: 121 GRVA 124


>Medtr5g088860.3 | Cyclin 4 | HC | chr5:38592999-38587723 | 20130731
          Length = 494

 Score =  169 bits (428), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 93/124 (75%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIMETKGDPKVLTMKEVVAR 60
           MTR+TRDF DTMQ+EA+P VS+DV+FA+ RFPNY+IGANNQIME K DPKVL+MKEV+AR
Sbjct: 1   MTRVTRDFGDTMQKEAVPAVSSDVVFATSRFPNYRIGANNQIMEAKDDPKVLSMKEVIAR 60

Query: 61  ETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECLK 120
           ETA LL+Q  RLSVRDLASKFEKG                     HVLLKKLRD+LE LK
Sbjct: 61  ETAMLLDQHNRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLK 120

Query: 121 GRVG 124
           GRV 
Sbjct: 121 GRVA 124


>Medtr5g088860.1 | Cyclin 4 | HC | chr5:38592337-38588120 | 20130731
          Length = 516

 Score =  169 bits (428), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 93/124 (75%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIMETKGDPKVLTMKEVVAR 60
           MTR+TRDF DTMQ+EA+P VS+DV+FA+ RFPNY+IGANNQIME K DPKVL+MKEV+AR
Sbjct: 23  MTRVTRDFGDTMQKEAVPAVSSDVVFATSRFPNYRIGANNQIMEAKDDPKVLSMKEVIAR 82

Query: 61  ETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECLK 120
           ETA LL+Q  RLSVRDLASKFEKG                     HVLLKKLRD+LE LK
Sbjct: 83  ETAMLLDQHNRLSVRDLASKFEKGLAAAAKLSEEARLREAASLEKHVLLKKLRDSLESLK 142

Query: 121 GRVG 124
           GRV 
Sbjct: 143 GRVA 146


>Medtr3g045180.1 | Cyclin 4 | HC | chr3:14610141-14617178 | 20130731
          Length = 498

 Score =  150 bits (378), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 87/123 (70%), Gaps = 4/123 (3%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIMETKGDPKVLTMKEVVAR 60
           MTR+T  F DTM      VVSADVIFASLRFP Y+IG+NN+IM+   DPKVL+MKEVVAR
Sbjct: 1   MTRVTHSFGDTMMMHK-DVVSADVIFASLRFPTYQIGSNNKIMD---DPKVLSMKEVVAR 56

Query: 61  ETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECLK 120
           ETAQLLEQQKRLSVRDLASKFEKG                     HVLLKKLRD LE LK
Sbjct: 57  ETAQLLEQQKRLSVRDLASKFEKGLAAAAKLSEEAKLREAASLEKHVLLKKLRDGLESLK 116

Query: 121 GRV 123
           GRV
Sbjct: 117 GRV 119


>Medtr7g089090.3 | myosin heavy chain-like protein | HC |
           chr7:34815836-34810879 | 20130731
          Length = 490

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIM-ETKGDPKVLTMKEVVA 59
           MT+++ +    M  EA+P VSADV F S  FP YK+GA++Q+  ET  D +  ++KEV+ 
Sbjct: 1   MTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQETAEDNQGPSLKEVIE 60

Query: 60  RETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECL 119
           +E + L EQ  R+SVRDLASKF+K                      HVLLKKLRDALE L
Sbjct: 61  QEASNLSEQNNRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALEYL 120

Query: 120 KGR 122
           KGR
Sbjct: 121 KGR 123


>Medtr7g089090.2 | myosin heavy chain-like protein | HC |
           chr7:34816463-34811080 | 20130731
          Length = 490

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIM-ETKGDPKVLTMKEVVA 59
           MT+++ +    M  EA+P VSADV F S  FP YK+GA++Q+  ET  D +  ++KEV+ 
Sbjct: 1   MTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQETAEDNQGPSLKEVIE 60

Query: 60  RETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECL 119
           +E + L EQ  R+SVRDLASKF+K                      HVLLKKLRDALE L
Sbjct: 61  QEASNLSEQNNRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALEYL 120

Query: 120 KGR 122
           KGR
Sbjct: 121 KGR 123


>Medtr7g089090.1 | myosin heavy chain-like protein | HC |
           chr7:34816460-34811349 | 20130731
          Length = 490

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 1   MTRMTRDFADTMQREAMPVVSADVIFASLRFPNYKIGANNQIM-ETKGDPKVLTMKEVVA 59
           MT+++ +    M  EA+P VSADV F S  FP YK+GA++Q+  ET  D +  ++KEV+ 
Sbjct: 1   MTKISPEIETKMPMEAVPPVSADVSFISNSFPKYKLGADHQVFQETAEDNQGPSLKEVIE 60

Query: 60  RETAQLLEQQKRLSVRDLASKFEKGXXXXXXXXXXXXXXXXXXXXXHVLLKKLRDALECL 119
           +E + L EQ  R+SVRDLASKF+K                      HVLLKKLRDALE L
Sbjct: 61  QEASNLSEQNNRISVRDLASKFDKNLSAAAKLSNEAKLREVPSLEGHVLLKKLRDALEYL 120

Query: 120 KGR 122
           KGR
Sbjct: 121 KGR 123