Miyakogusa Predicted Gene

Lj0g3v0005919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005919.1 Non Characterized Hit- tr|I1KML6|I1KML6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.13,0,Aldolase,NULL; seg,NULL; no description,Aldolase-type TIM
barrel; HYDROXYMETHYLGLUTARYL-COA LYASE,NU,CUFF.347.1
         (281 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g041700.1 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   446   e-126
Medtr3g041700.3 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   446   e-126
Medtr3g041700.4 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   446   e-125
Medtr3g041700.2 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   303   1e-82
Medtr7g089330.1 | hydroxymethylglutaryl-CoA lyase | HC | chr7:34...   189   3e-48
Medtr7g089330.2 | hydroxymethylglutaryl-CoA lyase | HC | chr7:34...   183   2e-46

>Medtr3g041700.1 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14847765-14852904 | 20130731
          Length = 433

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/272 (79%), Positives = 233/272 (85%), Gaps = 1/272 (0%)

Query: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSGACCRPSVDNLGMGNCFIDGRSCSTSNSCNEDN 60
           MSSLEEPLG DKLPSMST+DR+QRFSSG CCRP VDNLGMGNCFI+GRSCSTSNSCNEDN
Sbjct: 1   MSSLEEPLGHDKLPSMSTMDRVQRFSSG-CCRPQVDNLGMGNCFIEGRSCSTSNSCNEDN 59

Query: 61  EEYTAETFPWKRQTRNGSRGDSSSQKTMTIRRNSMKSGMIDNSLHTPGYQYSPKHNNKET 120
           E+YTAET+PWKRQTR+ SRGDS S +TMT  RN++KSG++DNS +T  YQYS K NNK+ 
Sbjct: 60  EDYTAETYPWKRQTRDMSRGDSFSPRTMTTGRNTLKSGIVDNSFYTSDYQYSQKRNNKDM 119

Query: 121 QDMAYKFMNGMPKFVKIVEVGPRDGLQNEKNIVPTSVKIELIHRLASSGLSVIEATSFVS 180
           QDMAYKFM GMP+FVKIVEVGPRDGLQNEKNIVPT VKIELIHRLAS+GLSVIEATSFVS
Sbjct: 120 QDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHRLASTGLSVIEATSFVS 179

Query: 181 PKWVPQLADAKDVMQAVKNLGGIRLPVLTPNLKXXXXXXXXXXXXXXXXXXXSESFSKSN 240
           PKWVPQLADAKDVMQAV NL GIRLPVLTPNLK                   SESFSKSN
Sbjct: 180 PKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAREVAVFASASESFSKSN 239

Query: 241 INCSIEESLARYRAVTSAAKELSIPVRGYVFC 272
           INCSIEESL+RYRAVT AAKELSIPVRGYV C
Sbjct: 240 INCSIEESLSRYRAVTRAAKELSIPVRGYVSC 271


>Medtr3g041700.3 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14848314-14852904 | 20130731
          Length = 433

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/272 (79%), Positives = 233/272 (85%), Gaps = 1/272 (0%)

Query: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSGACCRPSVDNLGMGNCFIDGRSCSTSNSCNEDN 60
           MSSLEEPLG DKLPSMST+DR+QRFSSG CCRP VDNLGMGNCFI+GRSCSTSNSCNEDN
Sbjct: 1   MSSLEEPLGHDKLPSMSTMDRVQRFSSG-CCRPQVDNLGMGNCFIEGRSCSTSNSCNEDN 59

Query: 61  EEYTAETFPWKRQTRNGSRGDSSSQKTMTIRRNSMKSGMIDNSLHTPGYQYSPKHNNKET 120
           E+YTAET+PWKRQTR+ SRGDS S +TMT  RN++KSG++DNS +T  YQYS K NNK+ 
Sbjct: 60  EDYTAETYPWKRQTRDMSRGDSFSPRTMTTGRNTLKSGIVDNSFYTSDYQYSQKRNNKDM 119

Query: 121 QDMAYKFMNGMPKFVKIVEVGPRDGLQNEKNIVPTSVKIELIHRLASSGLSVIEATSFVS 180
           QDMAYKFM GMP+FVKIVEVGPRDGLQNEKNIVPT VKIELIHRLAS+GLSVIEATSFVS
Sbjct: 120 QDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHRLASTGLSVIEATSFVS 179

Query: 181 PKWVPQLADAKDVMQAVKNLGGIRLPVLTPNLKXXXXXXXXXXXXXXXXXXXSESFSKSN 240
           PKWVPQLADAKDVMQAV NL GIRLPVLTPNLK                   SESFSKSN
Sbjct: 180 PKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAREVAVFASASESFSKSN 239

Query: 241 INCSIEESLARYRAVTSAAKELSIPVRGYVFC 272
           INCSIEESL+RYRAVT AAKELSIPVRGYV C
Sbjct: 240 INCSIEESLSRYRAVTRAAKELSIPVRGYVSC 271


>Medtr3g041700.4 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14848292-14852904 | 20130731
          Length = 454

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/272 (79%), Positives = 233/272 (85%), Gaps = 1/272 (0%)

Query: 1   MSSLEEPLGLDKLPSMSTIDRIQRFSSGACCRPSVDNLGMGNCFIDGRSCSTSNSCNEDN 60
           MSSLEEPLG DKLPSMST+DR+QRFSSG CCRP VDNLGMGNCFI+GRSCSTSNSCNEDN
Sbjct: 22  MSSLEEPLGHDKLPSMSTMDRVQRFSSG-CCRPQVDNLGMGNCFIEGRSCSTSNSCNEDN 80

Query: 61  EEYTAETFPWKRQTRNGSRGDSSSQKTMTIRRNSMKSGMIDNSLHTPGYQYSPKHNNKET 120
           E+YTAET+PWKRQTR+ SRGDS S +TMT  RN++KSG++DNS +T  YQYS K NNK+ 
Sbjct: 81  EDYTAETYPWKRQTRDMSRGDSFSPRTMTTGRNTLKSGIVDNSFYTSDYQYSQKRNNKDM 140

Query: 121 QDMAYKFMNGMPKFVKIVEVGPRDGLQNEKNIVPTSVKIELIHRLASSGLSVIEATSFVS 180
           QDMAYKFM GMP+FVKIVEVGPRDGLQNEKNIVPT VKIELIHRLAS+GLSVIEATSFVS
Sbjct: 141 QDMAYKFMKGMPEFVKIVEVGPRDGLQNEKNIVPTDVKIELIHRLASTGLSVIEATSFVS 200

Query: 181 PKWVPQLADAKDVMQAVKNLGGIRLPVLTPNLKXXXXXXXXXXXXXXXXXXXSESFSKSN 240
           PKWVPQLADAKDVMQAV NL GIRLPVLTPNLK                   SESFSKSN
Sbjct: 201 PKWVPQLADAKDVMQAVHNLRGIRLPVLTPNLKGFEAAVAAGAREVAVFASASESFSKSN 260

Query: 241 INCSIEESLARYRAVTSAAKELSIPVRGYVFC 272
           INCSIEESL+RYRAVT AAKELSIPVRGYV C
Sbjct: 261 INCSIEESLSRYRAVTRAAKELSIPVRGYVSC 292


>Medtr3g041700.2 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14847876-14852490 | 20130731
          Length = 358

 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 160/195 (82%)

Query: 78  SRGDSSSQKTMTIRRNSMKSGMIDNSLHTPGYQYSPKHNNKETQDMAYKFMNGMPKFVKI 137
           SRGDS S +TMT  RN++KSG++DNS +T  YQYS K NNK+ QDMAYKFM GMP+FVKI
Sbjct: 2   SRGDSFSPRTMTTGRNTLKSGIVDNSFYTSDYQYSQKRNNKDMQDMAYKFMKGMPEFVKI 61

Query: 138 VEVGPRDGLQNEKNIVPTSVKIELIHRLASSGLSVIEATSFVSPKWVPQLADAKDVMQAV 197
           VEVGPRDGLQNEKNIVPT VKIELIHRLAS+GLSVIEATSFVSPKWVPQLADAKDVMQAV
Sbjct: 62  VEVGPRDGLQNEKNIVPTDVKIELIHRLASTGLSVIEATSFVSPKWVPQLADAKDVMQAV 121

Query: 198 KNLGGIRLPVLTPNLKXXXXXXXXXXXXXXXXXXXSESFSKSNINCSIEESLARYRAVTS 257
            NL GIRLPVLTPNLK                   SESFSKSNINCSIEESL+RYRAVT 
Sbjct: 122 HNLRGIRLPVLTPNLKGFEAAVAAGAREVAVFASASESFSKSNINCSIEESLSRYRAVTR 181

Query: 258 AAKELSIPVRGYVFC 272
           AAKELSIPVRGYV C
Sbjct: 182 AAKELSIPVRGYVSC 196


>Medtr7g089330.1 | hydroxymethylglutaryl-CoA lyase | HC |
           chr7:34950520-34944100 | 20130731
          Length = 402

 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 119/180 (66%), Gaps = 5/180 (2%)

Query: 97  SGMIDNSLHTPGY----QYSPKHNNKETQDMAYKFMNGMPKFVKIVEVGPRDGLQNEKNI 152
           SG  DN  H   Y     +   +N   T++ + K    +P FVKIVEVG RDGLQNEK I
Sbjct: 61  SGANDNH-HAASYVVNRHFRADNNGICTKEFSSKLRKNIPDFVKIVEVGARDGLQNEKAI 119

Query: 153 VPTSVKIELIHRLASSGLSVIEATSFVSPKWVPQLADAKDVMQAVKNLGGIRLPVLTPNL 212
           VPT VKIELI  L SSGLSV+EATSFVSPKWVPQLADAKDV+ AV+++ G   PVLTPNL
Sbjct: 120 VPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAVRDVEGASFPVLTPNL 179

Query: 213 KXXXXXXXXXXXXXXXXXXXSESFSKSNINCSIEESLARYRAVTSAAKELSIPVRGYVFC 272
           K                   SESFSK+N+NC IE++LAR R + SA++ L+IPVRGY+ C
Sbjct: 180 KGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASASRSLTIPVRGYISC 239


>Medtr7g089330.2 | hydroxymethylglutaryl-CoA lyase | HC |
           chr7:34950524-34944100 | 20130731
          Length = 312

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/144 (62%), Positives = 105/144 (72%)

Query: 131 MPKFVKIVEVGPRDGLQNEKNIVPTSVKIELIHRLASSGLSVIEATSFVSPKWVPQLADA 190
           +P FVKIVEVG RDGLQNEK IVPT VKIELI  L SSGLSV+EATSFVSPKWVPQLADA
Sbjct: 8   IPDFVKIVEVGARDGLQNEKAIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADA 67

Query: 191 KDVMQAVKNLGGIRLPVLTPNLKXXXXXXXXXXXXXXXXXXXSESFSKSNINCSIEESLA 250
           KDV+ AV+++ G   PVLTPNLK                   SESFSK+N+NC IE++LA
Sbjct: 68  KDVLAAVRDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLA 127

Query: 251 RYRAVTSAAKELSIPVRGYVFCFF 274
           R R + SA++ L+IPVRGY+ C  
Sbjct: 128 RCRDIASASRSLTIPVRGYISCVV 151