Miyakogusa Predicted Gene

Lj0g3v0005909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005909.1 Non Characterized Hit- tr|Q2PF06|Q2PF06_TRIPR
Putative hydroxymethylglutaryl-CoA lyase (Fragment)
OS,89.02,1e-34,HMGL-like,Pyruvate carboxyltransferase; Aldolase,NULL;
no description,Aldolase-type TIM barrel; HYDR,CUFF.346.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g041700.4 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   150   2e-37
Medtr3g041700.2 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   150   2e-37
Medtr3g041700.1 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   150   2e-37
Medtr3g041700.3 | hydroxymethylglutaryl-CoA lyase | HC | chr3:14...   150   2e-37
Medtr7g089330.1 | hydroxymethylglutaryl-CoA lyase | HC | chr7:34...   139   4e-34
Medtr7g089330.2 | hydroxymethylglutaryl-CoA lyase | HC | chr7:34...   139   7e-34

>Medtr3g041700.4 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14848292-14852904 | 20130731
          Length = 454

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 79/82 (96%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGISAVDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLG+KTNVD+GKL+SAGDFI K L
Sbjct: 373 MGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSAGDFIGKQL 432

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPSGSKTA+AL RVT+DASKI
Sbjct: 433 GRPSGSKTAIALNRVTADASKI 454


>Medtr3g041700.2 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14847876-14852490 | 20130731
          Length = 358

 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 79/82 (96%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGISAVDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLG+KTNVD+GKL+SAGDFI K L
Sbjct: 277 MGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSAGDFIGKQL 336

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPSGSKTA+AL RVT+DASKI
Sbjct: 337 GRPSGSKTAIALNRVTADASKI 358


>Medtr3g041700.1 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14847765-14852904 | 20130731
          Length = 433

 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 79/82 (96%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGISAVDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLG+KTNVD+GKL+SAGDFI K L
Sbjct: 352 MGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSAGDFIGKQL 411

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPSGSKTA+AL RVT+DASKI
Sbjct: 412 GRPSGSKTAIALNRVTADASKI 433


>Medtr3g041700.3 | hydroxymethylglutaryl-CoA lyase | HC |
           chr3:14848314-14852904 | 20130731
          Length = 433

 Score =  150 bits (379), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/82 (89%), Positives = 79/82 (96%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGISAVDSSV+GLGGCPYAKGASGNVATEDVVYMLNGLG+KTNVD+GKL+SAGDFI K L
Sbjct: 352 MGISAVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGIKTNVDIGKLMSAGDFIGKQL 411

Query: 61  GRPSGSKTAVALGRVTSDASKI 82
           GRPSGSKTA+AL RVT+DASKI
Sbjct: 412 GRPSGSKTAIALNRVTADASKI 433


>Medtr7g089330.1 | hydroxymethylglutaryl-CoA lyase | HC |
           chr7:34950520-34944100 | 20130731
          Length = 402

 Score =  139 bits (351), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/83 (83%), Positives = 76/83 (91%), Gaps = 1/83 (1%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGIS VDSSVSGLGGCPYAKGA+GNVATEDVVYMLNGLGVKTNVDLGKL+ AGDFI KHL
Sbjct: 320 MGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMHAGDFICKHL 379

Query: 61  GRPSGSKTAVALGRVTS-DASKI 82
           GRP+GSK A AL +VT+ +ASK+
Sbjct: 380 GRPTGSKAATALNKVTTCNASKL 402


>Medtr7g089330.2 | hydroxymethylglutaryl-CoA lyase | HC |
           chr7:34950524-34944100 | 20130731
          Length = 312

 Score =  139 bits (349), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/83 (83%), Positives = 76/83 (91%), Gaps = 1/83 (1%)

Query: 1   MGISAVDSSVSGLGGCPYAKGASGNVATEDVVYMLNGLGVKTNVDLGKLLSAGDFISKHL 60
           MGIS VDSSVSGLGGCPYAKGA+GNVATEDVVYMLNGLGVKTNVDLGKL+ AGDFI KHL
Sbjct: 230 MGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMHAGDFICKHL 289

Query: 61  GRPSGSKTAVALGRVTS-DASKI 82
           GRP+GSK A AL +VT+ +ASK+
Sbjct: 290 GRPTGSKAATALNKVTTCNASKL 312