Miyakogusa Predicted Gene

Lj0g3v0005839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005839.1 Non Characterized Hit- tr|I3T1Y4|I3T1Y4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,51.69,0.00000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.330.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098735.3 | PLAC8 family protein | HC | chr8:41225853-4123...    82   2e-16
Medtr8g098735.2 | PLAC8 family protein | HC | chr8:41225873-4123...    82   2e-16
Medtr8g098735.1 | PLAC8 family protein | HC | chr8:41225914-4123...    82   2e-16

>Medtr8g098735.3 | PLAC8 family protein | HC |
          chr8:41225853-41231817 | 20130731
          Length = 263

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%), Gaps = 1/46 (2%)

Query: 25 AQCASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          A C SYLL KRALY+ MSRYTCCAGYMPCS RCGESKCPEFC CTE
Sbjct: 42 APCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPEFCLCTE 87


>Medtr8g098735.2 | PLAC8 family protein | HC |
          chr8:41225873-41231788 | 20130731
          Length = 263

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%), Gaps = 1/46 (2%)

Query: 25 AQCASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          A C SYLL KRALY+ MSRYTCCAGYMPCS RCGESKCPEFC CTE
Sbjct: 42 APCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPEFCLCTE 87


>Medtr8g098735.1 | PLAC8 family protein | HC |
          chr8:41225914-41231788 | 20130731
          Length = 263

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 40/46 (86%), Gaps = 1/46 (2%)

Query: 25 AQCASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          A C SYLL KRALY+ MSRYTCCAGYMPCS RCGESKCPEFC CTE
Sbjct: 42 APCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPEFCLCTE 87