Miyakogusa Predicted Gene

Lj0g3v0005539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005539.1 Non Characterized Hit- tr|I1M4P0|I1M4P0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.83,3e-18,VACUOLAR
PROTON ATPASE,NULL; VACUOLAR PROTON ATPASES,ATPase, V0/A0 complex
subunit a,CUFF.324.1
         (52 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g093210.4 | vacuolar proton ATPase a3-like protein | HC | ...    94   3e-20
Medtr2g093210.1 | vacuolar proton ATPase a3-like protein | HC | ...    94   3e-20
Medtr2g093210.2 | vacuolar proton ATPase a3-like protein | HC | ...    94   4e-20
Medtr4g061090.1 | vacuolar proton ATPase a3-like protein | HC | ...    81   2e-16
Medtr2g438500.1 | vacuolar proton ATPase a1 | HC | chr2:15553190...    75   1e-14
Medtr4g071070.1 | vacuolar proton ATPase a3-like protein | HC | ...    62   1e-10
Medtr3g112500.1 | vacuolar proton ATPase a3-like protein | HC | ...    57   3e-09

>Medtr2g093210.4 | vacuolar proton ATPase a3-like protein | HC |
          chr2:39725774-39717464 | 20130731
          Length = 517

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/46 (93%), Positives = 46/46 (100%)

Query: 7  MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          M++FIDNLPPMDLMRSEKMTFVQLIIPAESAHRA+SYLGELGLLQF
Sbjct: 1  MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQF 46


>Medtr2g093210.1 | vacuolar proton ATPase a3-like protein | HC |
          chr2:39725783-39712695 | 20130731
          Length = 818

 Score = 93.6 bits (231), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/46 (93%), Positives = 46/46 (100%)

Query: 7  MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          M++FIDNLPPMDLMRSEKMTFVQLIIPAESAHRA+SYLGELGLLQF
Sbjct: 1  MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQF 46


>Medtr2g093210.2 | vacuolar proton ATPase a3-like protein | HC |
          chr2:39725774-39712695 | 20130731
          Length = 685

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/46 (93%), Positives = 46/46 (100%)

Query: 7  MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          M++FIDNLPPMDLMRSEKMTFVQLIIPAESAHRA+SYLGELGLLQF
Sbjct: 1  MEKFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAVSYLGELGLLQF 46


>Medtr4g061090.1 | vacuolar proton ATPase a3-like protein | HC |
          chr4:22542875-22554753 | 20130731
          Length = 820

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/46 (80%), Positives = 41/46 (89%)

Query: 7  MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          MD F + LP MDLMRSEKMTFVQ+IIPAESAHR I+YLG+LGLLQF
Sbjct: 1  MDHFTEKLPSMDLMRSEKMTFVQIIIPAESAHRIITYLGQLGLLQF 46


>Medtr2g438500.1 | vacuolar proton ATPase a1 | HC |
          chr2:15553190-15552996 | 20130731
          Length = 64

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/46 (80%), Positives = 40/46 (86%)

Query: 7  MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          M++FIDNLP MDL+RSEKM FVQLIIPAESA RA SYLGEL LLQ 
Sbjct: 1  MEKFIDNLPLMDLIRSEKMMFVQLIIPAESAQRADSYLGELSLLQL 46


>Medtr4g071070.1 | vacuolar proton ATPase a3-like protein | HC |
          chr4:26777805-26767130 | 20130731
          Length = 822

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query: 15 PPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          PPMDL RSE M  +QLIIP ESAH  +SYLG+LGLLQF
Sbjct: 12 PPMDLFRSEPMQLIQLIIPMESAHCTVSYLGDLGLLQF 49


>Medtr3g112500.1 | vacuolar proton ATPase a3-like protein | HC |
          chr3:52762184-52758139 | 20130731
          Length = 722

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 30/36 (83%)

Query: 17 MDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQF 52
          MDL+RSE M  VQLIIP ESA R+ISYLG+LGL QF
Sbjct: 1  MDLLRSEPMQLVQLIIPIESAQRSISYLGDLGLFQF 36