Miyakogusa Predicted Gene

Lj0g3v0004569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004569.1 tr|B9HX83|B9HX83_POPTR DNA methyltransferase
(Fragment) OS=Populus trichocarpa GN=DMT907 PE=4
SV=1,49.46,2e-18,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; no description,NULL; DNA_methylase,C-5
cy,NODE_53601_length_1615_cov_217.188858.path1.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   196   3e-51
Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   196   4e-51
Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   196   4e-51
Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   196   5e-51
Medtr4g123600.1 | DNA methyltransferase, putative | HC | chr4:50...   102   7e-23

>Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr6:838285-828430 | 20130731
          Length = 588

 Score =  196 bits (499), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 92/105 (87%), Positives = 101/105 (96%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           MYPKG+N+LSLFSGIGGAEVALHRLGIPL+NVVSVEKSEVNRNIVRSWWEQTNQ+GNL+D
Sbjct: 458 MYPKGVNLLSLFSGIGGAEVALHRLGIPLRNVVSVEKSEVNRNIVRSWWEQTNQRGNLVD 517

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGL 105
            DDVQ LDADRLE+LM A GGFDL++GGSPCNNLAGSNRVSR+GL
Sbjct: 518 FDDVQQLDADRLERLMGAFGGFDLIVGGSPCNNLAGSNRVSRNGL 562


>Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7318299-7325230 | 20130731
          Length = 590

 Score =  196 bits (498), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 94/105 (89%), Positives = 100/105 (95%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           MYP G+N+LSLFSGIGGAEVALHRLG+PL NVVSVEKSEVNRNIVRSWWEQTNQKGNLID
Sbjct: 460 MYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 519

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGL 105
           +DDVQ LDA+RLEQLMSA GGFDLV+GGSPCNNLAGSNRVSR GL
Sbjct: 520 IDDVQQLDAERLEQLMSACGGFDLVVGGSPCNNLAGSNRVSRIGL 564


>Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr3:2719044-2714206 | 20130731
          Length = 590

 Score =  196 bits (498), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 100/105 (95%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           MYP G+N+LSLFSGIGGAEVALHRLG+PL NVVSVEKSEVNRNIVRSWW+QTNQKGNLID
Sbjct: 460 MYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWWDQTNQKGNLID 519

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGL 105
           LDDVQ LDA+RLEQLMSA GGFDLVIGGSPCNNLAGSNRVSR GL
Sbjct: 520 LDDVQHLDAERLEQLMSACGGFDLVIGGSPCNNLAGSNRVSRIGL 564


>Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7320468-7325119 | 20130731
          Length = 528

 Score =  196 bits (497), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 94/105 (89%), Positives = 100/105 (95%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           MYP G+N+LSLFSGIGGAEVALHRLG+PL NVVSVEKSEVNRNIVRSWWEQTNQKGNLID
Sbjct: 398 MYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 457

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGL 105
           +DDVQ LDA+RLEQLMSA GGFDLV+GGSPCNNLAGSNRVSR GL
Sbjct: 458 IDDVQQLDAERLEQLMSACGGFDLVVGGSPCNNLAGSNRVSRIGL 502


>Medtr4g123600.1 | DNA methyltransferase, putative | HC |
           chr4:50895545-50887895 | 20130731
          Length = 723

 Score =  102 bits (254), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/92 (48%), Positives = 65/92 (70%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           ++P G+ +LS+FSGIGGAEVALHRLGI +K +VSVE S   R I+  WW  + Q G L+ 
Sbjct: 595 IFPTGVTLLSIFSGIGGAEVALHRLGIKIKALVSVETSATKRKILEKWWRSSGQSGTLVQ 654

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCN 92
           ++++Q L + + E L++  G FDLVI  +PC+
Sbjct: 655 IEEIQKLTSKKFENLINNFGVFDLVIYQNPCS 686