Miyakogusa Predicted Gene

Lj0g3v0004549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004549.1 tr|G0ZS34|G0ZS34_9ROSI Domain rearranged
methyltransferase 1 (Fragment) OS=Vitis amurensis
GN=DRM2a1,42.11,0.000000000000004,seg,NULL; SUBFAMILY NOT NAMED,NULL;
DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3-RELATED,NULL;
S-adenosyl-L,NODE_19233_length_1612_cov_165.473938.path1.1
         (500 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   722   0.0  
Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   721   0.0  
Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   720   0.0  
Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   709   0.0  
Medtr4g123600.1 | DNA methyltransferase, putative | HC | chr4:50...   292   6e-79

>Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7318299-7325230 | 20130731
          Length = 590

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/506 (71%), Positives = 411/506 (81%), Gaps = 9/506 (1%)

Query: 1   MGFPREMIFKVIQXXXXXXXXXXXXXXXTYSAXXXXXXXXXXXXXXXDPFSSEYGGSSWD 60
           MGFP E++ KVIQ               TYSA               DP SSEY GSSWD
Sbjct: 63  MGFPGEVVSKVIQEYGEEDEDKLLEEILTYSALESSSQQHQQVEP--DPTSSEYAGSSWD 120

Query: 61  -ISDADTFSDDEEITKSVSGNNDTLVSLVKMGFKEEEALIAIERLGPNSSLEELVDFIGV 119
            +SD D+FSD EE+ KSVS N+DTL+SLV MGFKEEEAL+AIERLG +SSL++LVDFIGV
Sbjct: 121 DLSDGDSFSD-EEMPKSVSRNDDTLLSLVNMGFKEEEALMAIERLGLDSSLDDLVDFIGV 179

Query: 120 AQIAKAEDALLPPEDKPRYNELSKPKKQRFNDCEVRGRKKPKTENRI--LNEDDDDVPLH 177
           AQ+ K ED+LLPPEDK + +  SKP+K+   + EV G+KK K  ++     E+DD   L+
Sbjct: 180 AQLVKEEDSLLPPEDKQQCSGHSKPRKRSLYEYEVLGKKKRKVSDKRTPCEEEDDGQTLN 239

Query: 178 LPNPMIGFGIPNE-SFLTTHRKLPGDALGPPYFYYENVAFAPKGVWQTISRFLFDVEPEF 236
           LPNPM+GFG+PNE   + THR LP +A+GPPYFYYENVA  PKGVWQTISRFL+DV+PE+
Sbjct: 240 LPNPMMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVALTPKGVWQTISRFLYDVQPEY 299

Query: 237 VDSKYFCAAARKRGYIHNLPIENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQT 296
           VDSKYFCAAARKRGY+HNLPI NRFP+LP PPRTI DAFPL RKWWPSWDPR  LNCLQT
Sbjct: 300 VDSKYFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFPLLRKWWPSWDPRKNLNCLQT 359

Query: 297 CIASAKLTERIRKAVENYDG--EPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETL 354
              SA+ T+RIRK +E+ +   EP ESV+KYVL Q RKWNLVWVG+NKVAPLEPDE+E L
Sbjct: 360 VHGSAQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWNLVWVGKNKVAPLEPDEVEML 419

Query: 355 LGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEV 414
           LGFPRNHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVLKEMYP G+N+LSLFSGIGGAEV
Sbjct: 420 LGFPRNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPNGINLLSLFSGIGGAEV 479

Query: 415 ALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATG 474
           ALHRLG+PL NVVSVEKSEVNRNIVRSWWEQTNQKGNLID+DDVQ LDA+RLEQLMSA G
Sbjct: 480 ALHRLGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDIDDVQQLDAERLEQLMSACG 539

Query: 475 GFDLVIGGSPCNNLAGSNRVSRDGLE 500
           GFDLV+GGSPCNNLAGSNRVSR GLE
Sbjct: 540 GFDLVVGGSPCNNLAGSNRVSRIGLE 565


>Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr6:838285-828430 | 20130731
          Length = 588

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/504 (72%), Positives = 410/504 (81%), Gaps = 7/504 (1%)

Query: 1   MGFPREMIFKVIQXXXXXXXXXXXXXXXTYSAXXXXXXXXXXXXXXXDPFSSEYGGSSWD 60
           MGFP E++ KVIQ               TYS                DP SSE  GSSW+
Sbjct: 63  MGFPGEVVSKVIQEHGEENEEKLLNEILTYSVLESSPQQQQPAEL--DPTSSECAGSSWE 120

Query: 61  ISDADTFSDDEEITKSVSGNNDTLVSLVKMGFKEEEALIAIERLGPNSSLEELVDFIGVA 120
               D F  DEE+ K  S N+DTL  LVKMGF+EEEAL+AI+R+G + SLE LVDFIG A
Sbjct: 121 DLSEDDFFSDEELPKFDSTNDDTLTKLVKMGFEEEEALVAIDRIG-SDSLEALVDFIGAA 179

Query: 121 QIAKAEDALLPPEDKPRYNELSKPKKQRFNDCEVRGRKKPKTENRILNEDDDDV-PLHLP 179
           Q+AKAE+ALL PEDKP  +   K KK+   + EV G+K+PK E R L ED+++   L+LP
Sbjct: 180 QVAKAENALLLPEDKPGCSGNPKLKKRSLYEYEVLGKKRPKLEKRTLCEDEEEAQTLNLP 239

Query: 180 NPMIGFGIPNE-SFLTTHRKLPGDALGPPYFYYENVAFAPKGVWQTISRFLFDVEPEFVD 238
           NPM+GFGIPNE S + THR+LP +A+GPPYFYYENVA APKGVWQTISRFL+DVEPE+VD
Sbjct: 240 NPMMGFGIPNEPSSMITHRRLPENAVGPPYFYYENVALAPKGVWQTISRFLYDVEPEYVD 299

Query: 239 SKYFCAAARKRGYIHNLPIENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTCI 298
           SKYFCAAARKRGYIHNLPI NRFP+LP PPRTIHDAFPL R+WWP+WDPRTKLNCLQT  
Sbjct: 300 SKYFCAAARKRGYIHNLPIVNRFPLLPLPPRTIHDAFPLLRRWWPTWDPRTKLNCLQTVH 359

Query: 299 ASAKLTERIRKAVENYDG--EPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETLLG 356
           ASAKLT+RIRKAVE+ D   EP E+V+KYVL Q RKWNLVWVG+NKVAPLEPDE+E LLG
Sbjct: 360 ASAKLTDRIRKAVESCDDFEEPSETVKKYVLDQCRKWNLVWVGKNKVAPLEPDEVEMLLG 419

Query: 357 FPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEVAL 416
           FPRNHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVLKEMYPKG+N+LSLFSGIGGAEVAL
Sbjct: 420 FPRNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPKGVNLLSLFSGIGGAEVAL 479

Query: 417 HRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATGGF 476
           HRLGIPL+NVVSVEKSEVNRNIVRSWWEQTNQ+GNL+D DDVQ LDADRLE+LM A GGF
Sbjct: 480 HRLGIPLRNVVSVEKSEVNRNIVRSWWEQTNQRGNLVDFDDVQQLDADRLERLMGAFGGF 539

Query: 477 DLVIGGSPCNNLAGSNRVSRDGLE 500
           DL++GGSPCNNLAGSNRVSR+GLE
Sbjct: 540 DLIVGGSPCNNLAGSNRVSRNGLE 563


>Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7320468-7325119 | 20130731
          Length = 528

 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/506 (71%), Positives = 411/506 (81%), Gaps = 9/506 (1%)

Query: 1   MGFPREMIFKVIQXXXXXXXXXXXXXXXTYSAXXXXXXXXXXXXXXXDPFSSEYGGSSWD 60
           MGFP E++ KVIQ               TYSA               DP SSEY GSSWD
Sbjct: 1   MGFPGEVVSKVIQEYGEEDEDKLLEEILTYSALESSSQQHQQVEP--DPTSSEYAGSSWD 58

Query: 61  -ISDADTFSDDEEITKSVSGNNDTLVSLVKMGFKEEEALIAIERLGPNSSLEELVDFIGV 119
            +SD D+FSD EE+ KSVS N+DTL+SLV MGFKEEEAL+AIERLG +SSL++LVDFIGV
Sbjct: 59  DLSDGDSFSD-EEMPKSVSRNDDTLLSLVNMGFKEEEALMAIERLGLDSSLDDLVDFIGV 117

Query: 120 AQIAKAEDALLPPEDKPRYNELSKPKKQRFNDCEVRGRKKPKTENRI--LNEDDDDVPLH 177
           AQ+ K ED+LLPPEDK + +  SKP+K+   + EV G+KK K  ++     E+DD   L+
Sbjct: 118 AQLVKEEDSLLPPEDKQQCSGHSKPRKRSLYEYEVLGKKKRKVSDKRTPCEEEDDGQTLN 177

Query: 178 LPNPMIGFGIPNE-SFLTTHRKLPGDALGPPYFYYENVAFAPKGVWQTISRFLFDVEPEF 236
           LPNPM+GFG+PNE   + THR LP +A+GPPYFYYENVA  PKGVWQTISRFL+DV+PE+
Sbjct: 178 LPNPMMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVALTPKGVWQTISRFLYDVQPEY 237

Query: 237 VDSKYFCAAARKRGYIHNLPIENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQT 296
           VDSKYFCAAARKRGY+HNLPI NRFP+LP PPRTI DAFPL RKWWPSWDPR  LNCLQT
Sbjct: 238 VDSKYFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFPLLRKWWPSWDPRKNLNCLQT 297

Query: 297 CIASAKLTERIRKAVENYDG--EPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETL 354
              SA+ T+RIRK +E+ +   EP ESV+KYVL Q RKWNLVWVG+NKVAPLEPDE+E L
Sbjct: 298 VHGSAQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWNLVWVGKNKVAPLEPDEVEML 357

Query: 355 LGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEV 414
           LGFPRNHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVLKEMYP G+N+LSLFSGIGGAEV
Sbjct: 358 LGFPRNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPNGINLLSLFSGIGGAEV 417

Query: 415 ALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATG 474
           ALHRLG+PL NVVSVEKSEVNRNIVRSWWEQTNQKGNLID+DDVQ LDA+RLEQLMSA G
Sbjct: 418 ALHRLGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDIDDVQQLDAERLEQLMSACG 477

Query: 475 GFDLVIGGSPCNNLAGSNRVSRDGLE 500
           GFDLV+GGSPCNNLAGSNRVSR GLE
Sbjct: 478 GFDLVVGGSPCNNLAGSNRVSRIGLE 503


>Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr3:2719044-2714206 | 20130731
          Length = 590

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/506 (70%), Positives = 407/506 (80%), Gaps = 9/506 (1%)

Query: 1   MGFPREMIFKVIQXXXXXXXXXXXXXXXTYSAXXXXXXXXXXXXXXXDPFSSEYGGSSWD 60
           MGFP E++ KVIQ               TYSA               DP SSEY GSSWD
Sbjct: 63  MGFPGEVVSKVIQEYGEEDEDKLLEEILTYSALESSSQQHQQVEP--DPTSSEYAGSSWD 120

Query: 61  -ISDADTFSDDEEITKSVSGNNDTLVSLVKMGFKEEEALIAIERLGPNSSLEELVDFIGV 119
            +SD ++FSD EE  KSVS N+DTL+SLV MGFKEEEAL+AIERLG +SSL++LVDFIGV
Sbjct: 121 DLSDGNSFSD-EETPKSVSRNDDTLLSLVNMGFKEEEALMAIERLGLDSSLDDLVDFIGV 179

Query: 120 AQIAKAEDALLPPEDKPRYNELSKPKKQRFNDCEVRGRKKPKTENRI--LNEDDDDVPLH 177
           AQ+ K ED+LLPPEDK + +   KP+K+   + EV G+KK K  ++     E+DD   L+
Sbjct: 180 AQLVKEEDSLLPPEDKQQCSGHPKPRKRSLYEYEVLGKKKRKVSDKRTPCEEEDDGQTLN 239

Query: 178 LPNPMIGFGIPNE-SFLTTHRKLPGDALGPPYFYYENVAFAPKGVWQTISRFLFDVEPEF 236
           LPNPM+GFG+PNE   + THR LP +A+GPPYFYYENVA  PKGVWQ ISRFL+DV+PE+
Sbjct: 240 LPNPMMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVAITPKGVWQKISRFLYDVQPEY 299

Query: 237 VDSKYFCAAARKRGYIHNLPIENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQT 296
           VDSKYFCAAARKRGY+HNLPI NRFP+LP PPRTI DAFP  R+WWPSWDPR  LNCLQT
Sbjct: 300 VDSKYFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFPPLRRWWPSWDPRKNLNCLQT 359

Query: 297 CIASAKLTERIRKAVENYDG--EPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETL 354
              SA+ T+RIRK +E+ +   EP ESV+KYVL Q RKWNLVWVG+NKVAPLEPDE+E L
Sbjct: 360 VHGSAQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWNLVWVGKNKVAPLEPDEVEML 419

Query: 355 LGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEV 414
           LGFP+NHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVLKEMYP G+N+LSLFSGIGGAEV
Sbjct: 420 LGFPKNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYPNGINLLSLFSGIGGAEV 479

Query: 415 ALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATG 474
           ALHRLG+PL NVVSVEKSEVNRNIVRSWW+QTNQKGNLIDLDDVQ LDA+RLEQLMSA G
Sbjct: 480 ALHRLGVPLNNVVSVEKSEVNRNIVRSWWDQTNQKGNLIDLDDVQHLDAERLEQLMSACG 539

Query: 475 GFDLVIGGSPCNNLAGSNRVSRDGLE 500
           GFDLVIGGSPCNNLAGSNRVSR GLE
Sbjct: 540 GFDLVIGGSPCNNLAGSNRVSRIGLE 565


>Medtr4g123600.1 | DNA methyltransferase, putative | HC |
           chr4:50895545-50887895 | 20130731
          Length = 723

 Score =  292 bits (747), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 139/295 (47%), Positives = 191/295 (64%), Gaps = 3/295 (1%)

Query: 194 TTHRKLPGDALGPPYFYYENVAFAPKGVWQTISRFLFDVEPEFVDSKYFCAAARKRGYIH 253
           T  R L   A  PP+F + NV+      W+ +S+FL+ +EPEFV+++ F A  R  GYIH
Sbjct: 393 TPSRSLSSVAAKPPFFLFGNVSNITYDSWKKMSQFLYCIEPEFVNTELFSALNRIEGYIH 452

Query: 254 NLPIENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTCIASA--KLTERIRKAV 311
           NLP ENRF +LP+PP TI DA P T+KWWP WD R KLNC   C      +L +R+ +A+
Sbjct: 453 NLPTENRFQILPKPPMTIEDAIPRTKKWWPPWDSRKKLNC-NYCETGGITQLCDRLGRAL 511

Query: 312 ENYDGEPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETLLGFPRNHTRGGGISRTD 371
            N  G      QK +L   R  NLVW G+ K+ P+EP+ ++ +LG+P NHTR      T+
Sbjct: 512 ANSGGILTSQQQKDILRYCRGLNLVWTGKYKLGPIEPEHLDHILGYPLNHTRTDECDLTE 571

Query: 372 RYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEK 431
           R + L +SFQ DT+ YHLSVLK ++P G+ +LS+FSGIGGAEVALHRLGI +K +VSVE 
Sbjct: 572 RLQLLKHSFQTDTLGYHLSVLKPIFPTGVTLLSIFSGIGGAEVALHRLGIKIKALVSVET 631

Query: 432 SEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATGGFDLVIGGSPCN 486
           S   R I+  WW  + Q G L+ ++++Q L + + E L++  G FDLVI  +PC+
Sbjct: 632 SATKRKILEKWWRSSGQSGTLVQIEEIQKLTSKKFENLINNFGVFDLVIYQNPCS 686